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Journal Articles
- 2018
[j11]Alyaa M. Abdel-Haleem
, Hooman Hefzi, Katsuhiko Mineta, Xin Gao, Takashi Gojobori, Bernhard O. Palsson, Nathan E. Lewis, Neema Jamshidi:
Functional interrogation of Plasmodium genus metabolism identifies species- and stage-specific differences in nutrient essentiality and drug targeting. PLoS Comput. Biol. 14(1) (2018)- 2011
- [j10]Aarash Bordbar, Neema Jamshidi, Bernhard O. Palsson:
iAB-RBC-283: A proteomically derived knowledge-base of erythrocyte metabolism that can be used to simulate its physiological and patho-physiological states. BMC Syst. Biol. 5: 110 (2011) - [j9]Neema Jamshidi, Franklin J. Miller, Jess Mandel, Timothy Evans, Michael D. Kuo:
Individualized therapy of HHT driven by network analysis of metabolomic profiles. BMC Syst. Biol. 5: 200 (2011) - 2010
- [j8]Martin I. Sigurdsson, Neema Jamshidi, Eiríkur Steingrímsson, Ines Thiele, Bernhard Ø. Palsson:
A detailed genome-wide reconstruction of mouse metabolism based on human Recon 1. BMC Syst. Biol. 4: 140 (2010) - 2009
- [j7]Neema Jamshidi, Bernhard O. Palsson:
Using in silico models to simulate dual perturbation experiments: procedure development and interpretation of outcomes. BMC Syst. Biol. 3: 44 (2009) - [j6]Fan Li, Ines Thiele, Neema Jamshidi, Bernhard O. Palsson:
Identification of Potential Pathway Mediation Targets in Toll-like Receptor Signaling. PLoS Comput. Biol. 5(2) (2009) - [j5]Ines Thiele, Neema Jamshidi, Ronan M. T. Fleming, Bernhard O. Palsson:
Genome-Scale Reconstruction of Escherichia coli's Transcriptional and Translational Machinery: A Knowledge Base, Its Mathematical Formulation, and Its Functional Characterization. PLoS Comput. Biol. 5(3) (2009) - [j4]Albert A. de Graaf, Andreas P. Freidig, Baukje De Roos, Neema Jamshidi, Matthias Heinemann, Johan A. C. Rullmann, Kevin D. Hall, Martin Adiels, Ben van Ommen:
Nutritional Systems Biology Modeling: From Molecular Mechanisms to Physiology. PLoS Comput. Biol. 5(11) (2009) - 2008
- [j3]Neema Jamshidi, Bernhard Ø. Palsson:
Top-Down Analysis of Temporal Hierarchy in Biochemical Reaction Networks. PLoS Comput. Biol. 4(9) (2008) - 2007
- [j2]Neema Jamshidi, Bernhard Ø. Palsson:
Investigating the metabolic capabilities of Mycobacterium tuberculosis H37Rv using the in silico strain iNJ661 and proposing alternative drug targets. BMC Syst. Biol. 1: 26 (2007) - 2001
- [j1]Neema Jamshidi, Jeremy S. Edwards, Tom Fahland, George M. Church, Bernhard O. Palsson:
Dynamic simulation of the human red blood cell metabolic network. Bioinform. 17(3): 286-287 (2001)
Reference Works
- 2009
- [r1]Nathan E. Lewis, Neema Jamshidi, Ines Thiele, Bernhard O. Palsson:
Metabolic Systems Biology. Encyclopedia of Complexity and Systems Science 2009: 5535-5552
Coauthor Index
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