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Journal Articles
- 2022
[j3]Tommaso Alfonsi
, Anna Bernasconi, Arif Canakoglu, Marco Masseroli:
Genomic data integration and user-defined sample-set extraction for population variant analysis. BMC Bioinform. 23(1): 401 (2022)- 2021
- [j2]Anna Bernasconi, Luca Cilibrasi, Ruba Al Khalaf, Tommaso Alfonsi, Stefano Ceri, Pietro Pinoli, Arif Canakoglu:
EpiSurf: metadata-driven search server for analyzing amino acid changes within epitopes of SARS-CoV-2 and other viral species. Database J. Biol. Databases Curation 2021 (2021) - [j1]Arif Canakoglu, Pietro Pinoli, Anna Bernasconi, Tommaso Alfonsi, Damianos P. Melidis, Stefano Ceri:
ViruSurf: an integrated database to investigate viral sequences. Nucleic Acids Res. 49(Database-Issue): D817-D824 (2021)
Conference and Workshop Papers
- 2024
- [c3]Anna Bernasconi, Matteo Chiara, Tommaso Alfonsi, Stefano Ceri:
SENSIBLE: Implementing Data-Driven Early Warning Systems for Future Viral Epidemics. CAiSE Research Projects Exhibition 2024: 18-25 - 2022
- [c2]Tommaso Alfonsi, Luigi Bellomarini, Anna Bernasconi, Stefano Ceri:
Expressing Biological Problems with Logical Reasoning Languages. RuleML+RR (Companion) 2022 - 2021
- [c1]Ruba Al Khalaf, Tommaso Alfonsi, Stefano Ceri, Anna Bernasconi:
CoV2K: A Knowledge Base of SARS-CoV-2 Variant Impacts. RCIS 2021: 274-282
Data and Artifacts
- 2024
- [d4]Tommaso Alfonsi, Anna Bernasconi, Matteo Chiara, Stefano Ceri:
Supporting data and code for "Data-driven recombination detection in viral genomes". Version 3.3.3-v3. Zenodo, 2024 [all versions]
- [d3]Tommaso Alfonsi, Anna Bernasconi, Matteo Chiara, Stefano Ceri:
Supporting data and code for "Data-driven recombination detection in viral genomes". Version 4. Zenodo, 2024 [all versions] - 2023
- [d2]Tommaso Alfonsi, Anna Bernasconi, Matteo Chiara, Stefano Ceri:
Supporting data and code for "Data-driven recombination detection in viral genomes". Version 3.3.3. Zenodo, 2023 [all versions] - [d1]Tommaso Alfonsi, Anna Bernasconi, Matteo Chiara, Stefano Ceri:
Supporting data and code for "Data-driven recombination detection in viral genomes". Version 3.3.3-v2. Zenodo, 2023 [all versions]
Coauthor Index
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