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2020 – today
- 2024
[c14]Bogdan Nicolae, Justin M. Wozniak, Tekin Bicer, Hai Nguyen, Parth Patel, Haochen Pan, Amal Gueroudji, Maxime Gonthier, Valérie Hayot-Sasson, Eliu A. Huerta, Kyle Chard, Ryan Chard, Matthieu Dorier, Nageswara S. V. Rao, Anees Al-Najjar, Alessandra Corsi, Ian T. Foster:
Diaspora: Resilience-Enabling Services for Real-Time Distributed Workflows. e-Science 2024: 1-9- [c13]J. Gregory Pauloski, Valérie Hayot-Sasson, Maxime Gonthier, Nathaniel Hudson, Haochen Pan, Sicheng Zhou, Ian T. Foster, Kyle Chard:
TaPS: A Performance Evaluation Suite for Task-based Execution Frameworks. e-Science 2024: 1-10 - [c12]Alok Kamatar, Valérie Hayot-Sasson, Yadu N. Babuji, André Bauer, Gourav Rattihalli, Ninad Hogade, Dejan S. Milojicic, Kyle Chard, Ian T. Foster:
Enhancing Energy Efficiency with Multi-Site Scheduling Strategies. IPDPS (Workshops) 2024: 1175-1177 - [i21]Jim Pruyne, Valérie Hayot-Sasson, Weijian Zheng, Ryan Chard, Justin M. Wozniak, Tekin Bicer, Kyle Chard, Ian T. Foster:
Steering a Fleet: Adaptation for Large-Scale, Workflow-Based Experiments. CoRR abs/2403.06077 (2024) - [i20]Valérie Hayot-Sasson, Tristan Glatard:
Hierarchical storage management in user space for neuroimaging applications. CoRR abs/2404.11556 (2024) - [i19]Mathieu Dugré, Valérie Hayot-Sasson, Tristan Glatard:
Performance comparison of Dask and Apache Spark on HPC systems for Neuroimaging. CoRR abs/2406.01409 (2024) - [i18]Alok Kamatar, Valérie Hayot-Sasson, Yadu N. Babuji, André Bauer, Gourav Rattihalli, Ninad Hogade, Dejan S. Milojicic, Kyle Chard, Ian T. Foster:
GreenFaaS: Maximizing Energy Efficiency of HPC Workloads with FaaS. CoRR abs/2406.17710 (2024) - [i17]J. Gregory Pauloski, Valérie Hayot-Sasson, Logan T. Ward, Alexander Brace, André Bauer, Kyle Chard, Ian T. Foster:
Object Proxy Patterns for Accelerating Distributed Applications. CoRR abs/2407.01764 (2024) - [i16]Haochen Pan, Ryan Chard, Sicheng Zhou, Alok Kamatar, Rafael Vescovi, Valérie Hayot-Sasson, André Bauer, Maxime Gonthier, Kyle Chard, Ian T. Foster:
Octopus: Experiences with a Hybrid Event-Driven Architecture for Distributed Scientific Computing. CoRR abs/2407.11432 (2024) - [i15]J. Gregory Pauloski, Valérie Hayot-Sasson, Maxime Gonthier, Nathaniel Hudson, Haochen Pan, Sicheng Zhou, Ian T. Foster, Kyle Chard:
TaPS: A Performance Evaluation Suite for Task-based Execution Frameworks. CoRR abs/2408.07236 (2024) - [i14]Logan T. Ward, J. Gregory Pauloski, Valérie Hayot-Sasson, Yadu N. Babuji, Alexander Brace, Ryan Chard, Kyle Chard, Rajeev Thakur, Ian T. Foster:
Employing Artificial Intelligence to Steer Exascale Workflows with Colmena. CoRR abs/2408.14434 (2024) - [i13]Nathaniel Hudson, Valérie Hayot-Sasson, Yadu N. Babuji, Matt Baughman, J. Gregory Pauloski, Ryan Chard, Ian T. Foster, Kyle Chard:
Flight: A FaaS-Based Framework for Complex and Hierarchical Federated Learning. CoRR abs/2409.16495 (2024) - 2023
- [j3]Mathieu Dugré
, Valérie Hayot-Sasson, Tristan Glatard:
Performance comparison of Dask and Apache Spark on HPC systems for neuroimaging. Concurr. Comput. Pract. Exp. 35(21) (2023) - [j2]Maxim Zvyagin, Alexander Brace, Kyle Hippe, Yuntian Deng, Bin Zhang, Cindy Orozco Bohorquez, Austin Clyde, Bharat Kale, Danilo Perez-Rivera, Heng Ma, Carla M. Mann, Michael W. Irvin, Defne G. Ozgulbas, Natalia Vassilieva, J. Gregory Pauloski, Logan T. Ward, Valérie Hayot-Sasson, Murali Emani, Sam Foreman, Zhen Xie, Diangen Lin, Maulik Shukla, Weili Nie, Josh Romero, Christian Dallago, Arash Vahdat, Chaowei Xiao, Thomas Gibbs, Ian T. Foster, James J. Davis, Michael E. Papka, Thomas S. Brettin, Rick Stevens, Anima Anandkumar, Venkatram Vishwanath, Arvind Ramanathan:
GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics. Int. J. High Perform. Comput. Appl. 37(6): 683-705 (2023) - [c11]Alok Kamatar, Mansi Sakarvadia, Valérie Hayot-Sasson, Kyle Chard, Ian T. Foster:
Lazy Python Dependency Management in Large-Scale Systems. e-Science 2023: 1-10 - [c10]Logan T. Ward, J. Gregory Pauloski, Valérie Hayot-Sasson, Ryan Chard, Yadu N. Babuji, Ganesh Sivaraman, Sutanay Choudhury, Kyle Chard, Rajeev Thakur, Ian T. Foster:
Cloud Services Enable Efficient AI-Guided Simulation Workflows across Heterogeneous Resources. IPDPS Workshops 2023: 32-41 - [c9]Ashka Shah, Arvind Ramanathan, Valérie Hayot-Sasson, Rick Stevens:
Causal Discovery and Optimal Experimental Design for Genome-Scale Biological Network Recovery. PASC 2023: 1:1-1:11 - [c8]J. Gregory Pauloski, Valérie Hayot-Sasson, Logan T. Ward, Nathaniel Hudson, Charlie Sabino, Matt Baughman, Kyle Chard, Ian T. Foster:
Accelerating Communications in Federated Applications with Transparent Object Proxies. SC 2023: 59:1-59:15 - [i12]Logan T. Ward, J. Gregory Pauloski, Valérie Hayot-Sasson, Ryan Chard, Yadu N. Babuji, Ganesh Sivaraman, Sutanay Choudhury, Kyle Chard, Rajeev Thakur, Ian T. Foster:
Cloud Services Enable Efficient AI-Guided Simulation Workflows across Heterogeneous Resources. CoRR abs/2303.08803 (2023) - [i11]Ashka Shah, Arvind Ramanathan, Valérie Hayot-Sasson, Rick Stevens:
Causal Discovery and Optimal Experimental Design for Genome-Scale Biological Network Recovery. CoRR abs/2304.03210 (2023) - [i10]J. Gregory Pauloski, Valérie Hayot-Sasson, Logan T. Ward, Nathaniel Hudson, Charlie Sabino, Matt Baughman, Kyle Chard, Ian T. Foster:
Accelerating Communications in Federated Applications with Transparent Object Proxies. CoRR abs/2305.09593 (2023) - [i9]Shuaiwen Leon Song, Bonnie Kruft, Minjia Zhang, Conglong Li, Shiyang Chen, Chengming Zhang, Masahiro Tanaka, Xiaoxia Wu, Jeff Rasley, Ammar Ahmad Awan, Connor Holmes, Martin Cai, Adam Ghanem, Zhongzhu Zhou, Yuxiong He, Pete Luferenko, Divya Kumar, Jonathan A. Weyn, Ruixiong Zhang, Sylwester Klocek, Volodymyr Vragov, Mohammed AlQuraishi, Gustaf Ahdritz, Christina Floristean, Cristina Negri, Rao Kotamarthi, Venkatram Vishwanath, Arvind Ramanathan, Sam Foreman, Kyle Hippe, Troy Arcomano, Romit Maulik, Maxim Zvyagin, Alexander Brace, Bin Zhang, Cindy Orozco Bohorquez, Austin Clyde, Bharat Kale, Danilo Perez-Rivera, Heng Ma, Carla M. Mann, Michael W. Irvin, J. Gregory Pauloski, Logan T. Ward, Valérie Hayot-Sasson, Murali Emani, Zhen Xie, Diangen Lin, Maulik Shukla, Ian T. Foster, James J. Davis, Michael E. Papka, Thomas S. Brettin, Prasanna Balaprakash, Gina Tourassi, John Gounley, Heidi A. Hanson, Thomas E. Potok, Massimiliano Lupo Pasini, Kate Evans, Dan Lu, Dalton D. Lunga, Junqi Yin, Sajal Dash, Feiyi Wang, Mallikarjun Shankar, Isaac Lyngaas, Xiao Wang, Guojing Cong, Pei Zhang, Ming Fan, Siyan Liu, Adolfy Hoisie, Shinjae Yoo, Yihui Ren, William Tang, Kyle Felker, Alexey Svyatkovskiy, Hang Liu, Ashwin M. Aji, Angela Dalton, Michael J. Schulte, Karl Schulz, Yuntian Deng, Weili Nie, Josh Romero, Christian Dallago, Arash Vahdat, Chaowei Xiao, Thomas Gibbs, Anima Anandkumar, Rick Stevens:
DeepSpeed4Science Initiative: Enabling Large-Scale Scientific Discovery through Sophisticated AI System Technologies. CoRR abs/2310.04610 (2023) - 2022
- [d27]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Oscar Esteban, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Remi Gau, Hans J. Johnson, Evgenii Kalenkovich, Dmitry Petrov, Dylan M. Nielson, James D. Kent, Stefan Appelhoff, Mathias Goncalves, Shashank Bansal, Valérie Hayot-Sasson, Dimitri Papadopoulos Orfanos, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth DuPre, Andrew Janke, Alexander Ivanov, Ashley Gillman, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Adam Li, Jon Haitz Legarreta, Lea Waller, Mainak Jas, Michael Hanke, Nick Guenther, Russell Poldrack, Ariel Rokem, Chadwick B. Boulay, Jeanette A. Mumford, Alexis Thual, Chris Holdgraf, Isla Staden, Jason A. Staph, Antonin Rovai, Azeez Adebimpe, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, Gal Ben-Zvi, John A. Lee, John Kruper, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair, Suganya Sundaravadivelu:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2022
- [d26]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Oscar Esteban, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Remi Gau, Hans J. Johnson, Evgenii Kalenkovich, Dmitry Petrov, Dylan M. Nielson, James D. Kent, Stefan Appelhoff, Dimitri Papadopoulos Orfanos, Mathias Goncalves, Shashank Bansal, Valérie Hayot-Sasson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth DuPre, Andrew Janke, Alexander Ivanov, Ashley Gillman, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Adam Li, Jon Haitz Legarreta, Lea Waller, Mainak Jas, Michael Hanke, Nick Guenther, Russell Poldrack, Ariel Rokem, Chadwick B. Boulay, Jeanette Mumford, Alexis Thual, Chris Holdgraf, Isla Staden, Jason A. Staph, Antonin Rovai, Azeez Adebimpe, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, Gal Ben-Zvi, John A. Lee, John Kruper, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair, Suganya Sundaravadivelu:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2022 - [d25]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Oscar Esteban, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Hans J. Johnson, Remi Gau, Evgenii Kalenkovich, Dmitry Petrov, Dylan M. Nielson, James D. Kent, Stefan Appelhoff, Mathias Goncalves, Shashank Bansal, Valérie Hayot-Sasson, Dimitri Papadopoulos Orfanos, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth DuPre, Andrew Janke, Alexander Ivanov, Ashley Gillman, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Adam Li, Jon Haitz Legarreta, Lea Waller, Mainak Jas, Michael Hanke, Nick Guenther, Russell Poldrack, Ariel Rokem, Chadwick B. Boulay, Jeanette A. Mumford, Chris Holdgraf, Isla Staden, Jason A. Staph, Azeez Adebimpe, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, John Kruper, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair, Suganya Sundaravadivelu:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2022 - [d24]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Hans J. Johnson, Oscar Esteban, Evgenii Kalenkovich, Dmitry Petrov, Remi Gau, James D. Kent, Stefan Appelhoff, Mathias Goncalves, Shashank Bansal, Valérie Hayot-Sasson, Dylan M. Nielson, Dimitri Papadopoulos Orfanos, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth DuPre, Andrew Janke, Alexander Ivanov, Ashley Gillman, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Adam Li, Jon Haitz Legarreta, Lea Waller, Mainak Jas, Michael Hanke, Russell Poldrack, Ariel Rokem, Chadwick B. Boulay, Nick Guenther, Chris Holdgraf, Isla Staden, Azeez Adebimpe, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, Jason A. Staph, John A. Lee, John Kruper, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair, Suganya Sundaravadivelu:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2022 - [d23]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Hans J. Johnson, Oscar Esteban, Evgenii Kalenkovich, Dmitry Petrov, Remi Gau, James D. Kent, Stefan Appelhoff, Mathias Goncalves, Shashank Bansal, Valérie Hayot-Sasson, Dylan M. Nielson, Dimitri Papadopoulos Orfanos, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth DuPre, Andrew Janke, Alexander Ivanov, Ashley Gillman, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Adam Li, Jon Haitz Legarreta, Lea Waller, Mainak Jas, Michael Hanke, Nick Guenther, Russell Poldrack, Ariel Rokem, Chadwick B. Boulay, Chris Holdgraf, Isla Staden, Jason A. Staph, Azeez Adebimpe, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, John Kruper, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair, Suganya Sundaravadivelu:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2022 - [d22]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Hans J. Johnson, Oscar Esteban, Evgenii Kalenkovich, Dmitry Petrov, James D. Kent, Stefan Appelhoff, Shashank Bansal, Valérie Hayot-Sasson, Dylan M. Nielson, Dimitri Papadopoulos Orfanos, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Mathias Goncalves, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth DuPre, Andrew Janke, Alexander Ivanov, Ashley Gillman, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Adam Li, Jon Haitz Legarreta, Lea Waller, Mainak Jas, Michael Hanke, Russell Poldrack, Chadwick B. Boulay, Chris Holdgraf, Isla Staden, Remi Gau, Ariel Rokem, Azeez Adebimpe, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, Jason A. Staph, John A. Lee, John Kruper, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Nick Guenther, Pauline Roca, Ross Blair, Suganya Sundaravadivelu:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2022 - [i8]Valérie Hayot-Sasson, Mathieu Dugré, Tristan Glatard:
Sea: A lightweight data-placement library for Big Data scientific computing. CoRR abs/2207.01737 (2022) - 2021
- [c7]Hoang-Dung Do, Valérie Hayot-Sasson, Rafael Ferreira da Silva, Christopher Steele, Henri Casanova, Tristan Glatard:
Modeling the Linux page cache for accurate simulation of data-intensive applications. CLUSTER 2021: 398-408 - [c6]Valérie Hayot-Sasson, Tristan Glatard, Ariel Rokem:
The benefits of prefetching for large-scale cloud-based neuroimaging analysis workflows. WORKS 2021: 42-49 - [d21]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Hans J. Johnson, Oscar Esteban, Evgenii Kalenkovich, Dmitry Petrov, James D. Kent, Stefan Appelhoff, Shashank Bansal, Valérie Hayot-Sasson, Dylan M. Nielson, Dimitri Papadopoulos Orfanos, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Mathias Goncalves, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth DuPre, Andrew Janke, Alexander Ivanov, Ashley Gillman, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Adam Li, Jon Haitz Legarreta, Lea Waller, Mainak Jas, Michael Hanke, Russell Poldrack, Chadwick B. Boulay, Chris Holdgraf, Isla Staden, Remi Gau, Ariel Rokem, Azeez Adebimpe, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, John Kruper, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair, Suganya Sundaravadivelu:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2021 - [d20]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Hans J. Johnson, Oscar Esteban, Dmitry Petrov, James D. Kent, Stefan Appelhoff, Valérie Hayot-Sasson, Dylan M. Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Mathias Goncalves, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth Dupre, Andrew Janke, Alexander Ivanov, Ashley Gillman, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Adam Li, Jon Haitz Legarreta, Mainak Jas, Michael Hanke, Russell Poldrack, Chadwick B. Boulay, Chris Holdgraf, Evgenii Kalenkovich, Isla Staden, Remi Gau, Ariel Rokem, Azeez Adebimpe, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, John Kruper, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair, Shashank Bansal, Suganya Sundaravadivelu:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2021 - [d19]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Hans J. Johnson, Oscar Esteban, Dmitry Petrov, James D. Kent, Stefan Appelhoff, Valérie Hayot-Sasson, Dylan M. Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Mathias Goncalves, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth Dupre, Andrew Janke, Alexander Ivanov, Ashley Gillman, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Adam Li, Jon Haitz Legarreta, Lea Waller, Mainak Jas, Michael Hanke, Russell Poldrack, Chadwick B. Boulay, Chris Holdgraf, Evgenii Kalenkovich, Isla Staden, Remi Gau, Ariel Rokem, Azeez Adebimpe, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, John Kruper, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair, Shashank Bansal, Suganya Sundaravadivelu:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2021 - [d18]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Hans J. Johnson, Oscar Esteban, Dmitry Petrov, James D. Kent, Stefan Appelhoff, Valérie Hayot-Sasson, Dylan M. Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Mathias Goncalves, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth DuPre, Andrew Janke, Alexander Ivanov, Ashley Gillman, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Adam Li, Jon Haitz Legarreta, Lea Waller, Mainak Jas, Michael Hanke, Russell Poldrack, Chadwick B. Boulay, Chris Holdgraf, Evgenii Kalenkovich, Isla Staden, Remi Gau, Ariel Rokem, Azeez Adebimpe, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, John Kruper, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair, Shashank Bansal, Suganya Sundaravadivelu:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2021 - [i7]Hoang-Dung Do, Valérie Hayot-Sasson, Rafael Ferreira da Silva, Christopher Steele, Henri Casanova, Tristan Glatard:
Modeling the Linux page cache for accurate simulation of data-intensive applications. CoRR abs/2101.01335 (2021) - [i6]Valérie Hayot-Sasson, Tristan Glatard, Ariel Rokem:
The benefits of prefetching for large-scale cloud-based neuroimaging analysis workflows. CoRR abs/2108.10496 (2021) - 2020
- [c5]Valérie Hayot-Sasson, Shawn T. Brown, Tristan Glatard:
Performance benefits of Intel® Optane™ DC persistent memory for the parallel processing of large neuroimaging data. CCGRID 2020: 509-518 - [d17]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Yaroslav O. Halchenko, Taylor Salo, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Hans J. Johnson, Oscar Esteban, Dmitry Petrov, Valérie Hayot-Sasson, James D. Kent, Dylan M. Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth Dupre, Stefan Appelhoff, Andrew Janke, Alexander Ivanov, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Jon Haitz Legarreta, Mainak Jas, Michael Hanke, Russell Poldrack, Chadwick B. Boulay, Chris Holdgraf, Isla Staden, Remi Gau, Ariel Rokem, Ashley Gillman, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2020 - [d16]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Yaroslav O. Halchenko, Taylor Salo, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Hans J. Johnson, Oscar Esteban, Dmitry Petrov, Valérie Hayot-Sasson, James D. Kent, Dylan M. Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth Dupre, Stefan Appelhoff, Andrew Janke, Alexander Ivanov, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Jon Haitz Legarreta, Mainak Jas, Michael Hanke, Russell Poldrack, Chadwick B. Boulay, Chris Holdgraf, Isla Staden, Remi Gau, Ariel Rokem, Ashley Gillman, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2020 - [d15]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Hans J. Johnson, Oscar Esteban, Dmitry Petrov, James D. Kent, Stefan Appelhoff, Valérie Hayot-Sasson, Dylan M. Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth Dupre, Andrew Janke, Alexander Ivanov, Ashley Gillman, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Adam Li, Jon Haitz Legarreta, Mainak Jas, Michael Hanke, Russell Poldrack, Chadwick B. Boulay, Chris Holdgraf, Evgenii Kalenkovich, Isla Staden, Remi Gau, Ariel Rokem, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2020 - [d14]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Hans J. Johnson, Oscar Esteban, Dmitry Petrov, James D. Kent, Stefan Appelhoff, Valérie Hayot-Sasson, Dylan M. Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth Dupre, Andrew Janke, Alexander Ivanov, Ashley Gillman, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Adam Li, Jon Haitz Legarreta, Mainak Jas, Michael Hanke, Russell Poldrack, Chadwick B. Boulay, Chris Holdgraf, Evgenii Kalenkovich, Isla Staden, Remi Gau, Ariel Rokem, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, Mathias Goncalves, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2020 - [d13]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Hans J. Johnson, Oscar Esteban, Dmitry Petrov, James D. Kent, Stefan Appelhoff, Valérie Hayot-Sasson, Dylan M. Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth Dupre, Andrew Janke, Alexander Ivanov, Ashley Gillman, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Adam Li, Jon Haitz Legarreta, Mainak Jas, Michael Hanke, Russell Poldrack, Chadwick B. Boulay, Chris Holdgraf, Evgenii Kalenkovich, Isla Staden, Remi Gau, Ariel Rokem, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, Mathias Goncalves, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2020 - [d12]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Hans J. Johnson, Oscar Esteban, Dmitry Petrov, James D. Kent, Stefan Appelhoff, Valérie Hayot-Sasson, Dylan M. Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Mathias Goncalves, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth Dupre, Andrew Janke, Alexander Ivanov, Ashley Gillman, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Adam Li, Jon Haitz Legarreta, Mainak Jas, Michael Hanke, Russell Poldrack, Chadwick B. Boulay, Chris Holdgraf, Evgenii Kalenkovich, Isla Staden, Remi Gau, Ariel Rokem, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, John Kruper, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair, Suganya Sundaravadivelu:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2020 - [d11]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Hans J. Johnson, Oscar Esteban, Dmitry Petrov, James D. Kent, Stefan Appelhoff, Valérie Hayot-Sasson, Dylan M. Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Mathias Goncalves, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth Dupre, Andrew Janke, Alexander Ivanov, Ashley Gillman, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Adam Li, Jon Haitz Legarreta, Mainak Jas, Michael Hanke, Russell Poldrack, Chadwick B. Boulay, Chris Holdgraf, Evgenii Kalenkovich, Isla Staden, Remi Gau, Ariel Rokem, Bertrand Thirion, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, John Kruper, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair, Suganya Sundaravadivelu:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2020
2010 – 2019
- 2019
- [j1]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Quinten McNamara, Krista Destasio, Jean-Baptiste Poline, Dmitry Petrov, Valérie Hayot-Sasson, Dylan Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Elizabeth Dupre, Adina S. Wagner, Lee S. Tirrell, Mainak Jas, Michael Hanke, Russell A. Poldrack, Oscar Esteban, Stefan Appelhoff, Chris Holdgraf, Isla Staden, Bertrand Thirion, Dave F. Kleinschmidt, John A. Lee, Matteo di Castello, Michael Notter, Ross Blair:
PyBIDS: Python tools for BIDS datasets. J. Open Source Softw. 4(40): 1294 (2019) - [c4]Valérie Hayot-Sasson, Shawn T. Brown, Tristan Glatard:
Performance Evaluation of Big Data Processing Strategies for Neuroimaging. CCGRID 2019: 449-458 - [c3]Valérie Hayot-Sasson, Tristan Glatard:
Evaluation of Pilot Jobs for Apache Spark Applications on HPC Clusters. eScience 2019: 146-155 - [c2]Mathieu Dugré, Valérie Hayot-Sasson, Tristan Glatard:
A Performance Comparison of Dask and Apache Spark for Data-Intensive Neuroimaging Pipelines. WORKS@SC 2019: 40-49 - [d10]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Yaroslav O. Halchenko, Taylor Salo, Quinten McNamara, Krista Destasio, Jean-Baptiste Poline, Hans J. Johnson, Dmitry Petrov, Valérie Hayot-Sasson, Dylan Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth Dupre, Stefan Appelhoff, Oscar Esteban, Alexander Ivanov, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Jon Haitz Legarreta, Mainak Jas, Michael Hanke, Russell Poldrack, Chris Holdgraf, Isla Staden, Remi Gau, Ariel Rokem, Ashley Gillman, Bertrand Thirion, Chadwick B. Boulay, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2019 - [d9]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Yaroslav O. Halchenko, Taylor Salo, Quinten McNamara, Krista Destasio, Jean-Baptiste Poline, Dmitry Petrov, Valérie Hayot-Sasson, Dylan M. Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Adina S. Wagner, Elizabeth Dupre, Alexander Ivanov, Johannes Wennberg, Lee S. Tirrell, Mainak Jas, Michael Hanke, Russell Poldrack, Oscar Esteban, Stefan Appelhoff, Chris Holdgraf, Isla Staden, Ariel Rokem, Bertrand Thirion, Chadwick B. Boulay, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair:
bids-standard/pybids: 0.9.1. Zenodo, 2019 - [d8]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Yaroslav O. Halchenko, Taylor Salo, Quinten McNamara, Krista Destasio, Jean-Baptiste Poline, Dmitry Petrov, Valérie Hayot-Sasson, Dylan M. Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Adina S. Wagner, Elizabeth Dupre, Stefan Appelhoff, Alexander Ivanov, Johannes Wennberg, Lee S. Tirrell, Oscar Esteban, Mainak Jas, Michael Hanke, Russell Poldrack, Chris Holdgraf, Isla Staden, Ariel Rokem, Bertrand Thirion, Chadwick B. Boulay, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2019 - [d7]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Yaroslav O. Halchenko, Taylor Salo, Quinten McNamara, Krista Destasio, Jean-Baptiste Poline, Dmitry Petrov, Valérie Hayot-Sasson, Dylan M. Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Adina S. Wagner, Elizabeth Dupre, Stefan Appelhoff, Alexander Ivanov, Johannes Wennberg, Lee S. Tirrell, Oscar Esteban, Mainak Jas, Michael Hanke, Russell Poldrack, Chris Holdgraf, Isla Staden, Ariel Rokem, Bertrand Thirion, Chadwick B. Boulay, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair:
bids-standard/pybids: 0.9.3. Zenodo, 2019 - [d6]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Yaroslav O. Halchenko, Taylor Salo, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Dmitry Petrov, Valérie Hayot-Sasson, Dylan Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Adina S. Wagner, Elizabeth Dupre, Stefan Appelhoff, Oscar Esteban, Alexander Ivanov, Johannes Wennberg, Lee S. Tirrell, Jon Haitz Legarreta, Mainak Jas, Michael Hanke, Russell Poldrack, Chris Holdgraf, Isla Staden, Remi Gau, Steven Tilley, Ariel Rokem, Bertrand Thirion, Chadwick B. Boulay, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2019 - [d5]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Yaroslav O. Halchenko, Taylor Salo, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Dmitry Petrov, Hans J. Johnson, Valérie Hayot-Sasson, Dylan Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Satrajit S. Ghosh, Adina S. Wagner, Elizabeth Dupre, Stefan Appelhoff, Oscar Esteban, Alexander Ivanov, Johannes Wennberg, Lee S. Tirrell, Steven Tilley, Jon Haitz Legarreta, Mainak Jas, Michael Hanke, Russell Poldrack, Chris Holdgraf, Isla Staden, Remi Gau, Ariel Rokem, Ashley Gillman, Bertrand Thirion, Chadwick B. Boulay, Dave F. Kleinschmidt, Erin W. Dickie, John A. Lee, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair:
PyBIDS: Python tools for BIDS datasets. Zenodo, 2019 - [d4]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Quinten McNamara, Krista Destasio, Jean-Baptiste Poline, Dmitry Petrov, Valérie Hayot-Sasson, Dylan Nielson, Johan D. Carlin, Gregory Kiar, Kirstie Jane Whitaker, Elizabeth Dupre, Adina S. Wagner, Alexander Ivanov, Lee S. Tirrell, Mainak Jas, Michael Hanke, Russell Poldrack, Oscar Esteban, Stefan Appelhoff, Chris Holdgraf, Isla Staden, Ariel Rokem, Bertrand Thirion, Dave F. Kleinschmidt, John A. Lee, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair:
bids-standard/pybids: 0.7.1. Zenodo, 2019 - [d3]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Dmitry Petrov, Valérie Hayot-Sasson, Dylan M. Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Elizabeth Dupre, Adina S. Wagner, Alexander Ivanov, Lee S. Tirrell, Mainak Jas, Michael Hanke, Russell Poldrack, Oscar Esteban, Stefan Appelhoff, Chris Holdgraf, Isla Staden, Ariel Rokem, Bertrand Thirion, Dave F. Kleinschmidt, John A. Lee, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair:
bids-standard/pybids: 0.8.0. Zenodo, 2019 - [d2]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Yaroslav O. Halchenko, Quinten McNamara, Krista DeStasio, Jean-Baptiste Poline, Dmitry Petrov, Valérie Hayot-Sasson, Dylan M. Nielson, Johan D. Carlin, Gregory Kiar, Kirstie J. Whitaker, Elizabeth Dupre, Adina S. Wagner, Alexander Ivanov, Lee S. Tirrell, Mainak Jas, Michael Hanke, Russell Poldrack, Oscar Esteban, Stefan Appelhoff, Chris Holdgraf, Isla Staden, Ariel Rokem, Bertrand Thirion, Dave F. Kleinschmidt, John A. Lee, Matteo Visconti di Oleggio Castello, Michael Philipp Notter, Pauline Roca, Ross Blair:
bids-standard/pybids: 0.9.0. Zenodo, 2019 - [d1]Tal Yarkoni, Christopher J. Markiewicz, Alejandro de la Vega, Krzysztof J. Gorgolewski, Taylor Salo, Quinten McNamara, Krista Destasio, Yaroslav O. Halchenko, Jean-Baptiste Poline, Dmitry Petrov, Valérie Hayot-Sasson, Dylan Nielson, Gregory Kiar, Kirstie Jane Whitaker, Elizabeth Dupre, Alexander Ivanov, Lee S. Tirrell, Mainak Jas, Michael Hanke, Russell Poldrack, Oscar Esteban, Stefan Appelhoff, Chris Holdgraf, Isla Staden, Adina S. Wagner, Ariel Rokem, Bertrand Thirion, Dave F. Kleinschmidt, Johan D. Carlin, John A. Lee, Matteo Visconti di Oleggio Castello, Pauline Roca, Ross Blair:
bids-standard/pybids: 0.7.0. Zenodo, 2019 - [i5]Valérie Hayot-Sasson, Tristan Glatard:
Evaluation of pilot jobs for Apache Spark applications on HPC clusters. CoRR abs/1905.12720 (2019) - [i4]Mathieu Dugré, Valérie Hayot-Sasson, Tristan Glatard:
A performance comparison of Dask and Apache Spark for data-intensive neuroimaging pipelines. CoRR abs/1907.13030 (2019) - [i3]Valérie Hayot-Sasson, Shawn T. Brown, Tristan Glatard:
Performance benefits of Intel(R) OptaneTM DC persistent memory for the parallel processing of large neuroimaging data. CoRR abs/1912.11794 (2019) - 2018
- [i2]Valérie Hayot-Sasson, Shawn T. Brown, Tristan Glatard:
Performance Evaluation of Big Data Processing Strategies for Neuroimaging. CoRR abs/1812.06492 (2018) - 2017
- [c1]Valérie Hayot-Sasson, Yongping Gao, Yuhong Yan, Tristan Glatard:
Sequential algorithms to split and merge ultra-high resolution 3D images. IEEE BigData 2017: 415-424 - [i1]Tristan Glatard, Gregory Kiar, Tristan Aumentado-Armstrong, Natacha Beck, Pierre Bellec, Rémi Bernard, Axel Bonnet, Sorina Camarasu-Pop, Frédéric Cervenansky, Samir Das, Rafael Ferreira da Silva, Guillaume Flandin, Pascal Girard, Krzysztof J. Gorgolewski, Charles R. G. Guttmann, Valérie Hayot-Sasson, Pierre-Olivier Quirion, Pierre Rioux, Marc-Etienne Rousseau, Alan C. Evans:
Boutiques: a flexible framework for automated application integration in computing platforms. CoRR abs/1711.09713 (2017)
Coauthor Index
Matteo di Castello
aka: Matteo Visconti di Oleggio Castello
aka: Matteo Visconti di Oleggio Castello
Krista Destasio
aka: Krista DeStasio
aka: Krista DeStasio
Elizabeth DuPre
aka: Elizabeth Dupre
aka: Elizabeth Dupre
Dylan Nielson
aka: Dylan M. Nielson
aka: Dylan M. Nielson
Michael Philipp Notter
aka: Michael Notter
aka: Michael Notter
Russell A. Poldrack
aka: Russell Poldrack
aka: Russell Poldrack
Kirstie J. Whitaker
aka: Kirstie Jane Whitaker
aka: Kirstie Jane Whitaker
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