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Florian Dubost
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2020 – today
- 2024
- [j10]Carole H. Sudre, Kimberlin M. H. van Wijnen, Florian Dubost, Hieab Adams, David Atkinson, Frederik Barkhof, Mahlet A. Birhanu, Esther E. Bron, Robin Camarasa, Nish Chaturvedi, Yuan Chen, Zihao Chen, Shuai Chen, Qi Dou, Tavia E. Evans, Ivan Ezhov, Haojun Gao, Marta Gironés-Sangüesa, Juan Domingo Gispert, Beatriz Gomez Anson, Alun D. Hughes, Mohammad Arfan Ikram, Silvia Ingala, Hans Rolf Jäger, Florian Kofler, Hugo J. Kuijf, Denis Kutnar, Minho Lee, Bo Li, Luigi Lorenzini, Bjoern H. Menze, José Luis Molinuevo, Yiwei Pan, Élodie Puybareau, Rafael Rehwald, Ruisheng Su, Pengcheng Shi, Lorna Smith, Therese Tillin, Guillaume Tochon, Hélène Urien, Bas H. M. van der Velden, Isabelle F. van der Velpen, Benedikt Wiestler, Frank J. Wolters, Pinar Yilmaz, Marius de Groot, Meike W. Vernooij, Marleen de Bruijne:
Where is VALDO? VAscular Lesions Detection and segmentatiOn challenge at MICCAI 2021. Medical Image Anal. 91: 103029 (2024) - [i32]Yang Zheng, Qingqing Zhao, Guandao Yang, Wang Yifan, Donglai Xiang, Florian Dubost, Dmitry Lagun, Thabo Beeler, Federico Tombari, Leonidas J. Guibas, Gordon Wetzstein:
PhysAvatar: Learning the Physics of Dressed 3D Avatars from Visual Observations. CoRR abs/2404.04421 (2024) - [i31]Colton Stearns, Adam W. Harley, Mikaela Uy, Florian Dubost, Federico Tombari, Gordon Wetzstein, Leonidas J. Guibas:
Dynamic Gaussian Marbles for Novel View Synthesis of Casual Monocular Videos. CoRR abs/2406.18717 (2024) - 2023
- [c17]Ali Mirzazadeh, Florian Dubost, Maxwell Pike, Krish Maniar, Max Zuo, Christopher Lee-Messer, Daniel L. Rubin:
ATCON: Attention Consistency for Vision Models. WACV 2023: 1880-1889 - [c16]Florian Dubost, Erin Hong, Siyi Tang, Nandita Bhaskhar, Christopher Lee-Messer, Daniel L. Rubin:
Semi-Supervised Learning for Sparsely-Labeled Sequential Data: Application to Healthcare Video Processing. WACV 2023: 1890-1899 - [i30]Erfan Darzi, Florian Dubost, Nanna Maria Sijtsema, Peter M. A. van Ooijen:
Exploring adversarial attacks in federated learning for medical imaging. CoRR abs/2310.06227 (2023) - [i29]Erfan Darzi, Florian Dubost, Nanna Maria Sijtsema, Peter M. A. van Ooijen:
The Hidden Adversarial Vulnerabilities of Medical Federated Learning. CoRR abs/2310.13893 (2023) - 2022
- [j9]Soumick Chatterjee, Kartik Prabhu, Mahantesh Pattadkal, Gerda Bortsova, Chompunuch Sarasaen, Florian Dubost, Hendrik Mattern, Marleen de Bruijne, Oliver Speck, Andreas Nürnberger:
DS6, Deformation-Aware Semi-Supervised Learning: Application to Small Vessel Segmentation with Noisy Training Data. J. Imaging 8(10): 259 (2022) - [j8]Shuai Chen, Zahra Sedghi Gamechi, Florian Dubost, Gijs van Tulder, Marleen de Bruijne:
An end-to-end approach to segmentation in medical images with CNN and posterior-CRF. Medical Image Anal. 76: 102311 (2022) - [c15]Siyi Tang, Jared Dunnmon, Khaled Kamal Saab, Xuan Zhang, Qianying Huang, Florian Dubost, Daniel L. Rubin, Christopher Lee-Messer:
Self-Supervised Graph Neural Networks for Improved Electroencephalographic Seizure Analysis. ICLR 2022 - [i28]Soumick Chatterjee, Hadya Yassin, Florian Dubost, Andreas Nürnberger, Oliver Speck:
Weakly-supervised segmentation using inherently-explainable classification models and their application to brain tumour classification. CoRR abs/2206.05148 (2022) - [i27]Carole H. Sudre, Kimberlin M. H. van Wijnen, Florian Dubost, Hieab Adams, David Atkinson, Frederik Barkhof, Mahlet A. Birhanu, Esther E. Bron, Robin Camarasa, Nish Chaturvedi, Yuan Chen, Zihao Chen, Shuai Chen, Qi Dou, Tavia E. Evans, Ivan Ezhov, Haojun Gao, Marta Gironés-Sangüesa, Juan Domingo Gispert, Beatriz Gomez Anson, Alun D. Hughes, Mohammad Arfan Ikram, Silvia Ingala, Hans Rolf Jäger, Florian Kofler, Hugo J. Kuijf, Denis Kutnar, Minho Lee, Bo Li, Luigi Lorenzini, Bjoern H. Menze, José Luis Molinuevo, Yiwei Pan, Élodie Puybareau, Rafael Rehwald, Ruisheng Su, Pengcheng Shi, Lorna Smith, Therese Tillin, Guillaume Tochon, Hélène Urien, Bas H. M. van der Velden, Isabelle F. van der Velpen, Benedikt Wiestler, Frank J. Wolters, Pinar Yilmaz, Marius de Groot, Meike W. Vernooij, Marleen de Bruijne:
Where is VALDO? VAscular Lesions Detection and segmentatiOn challenge at MICCAI 2021. CoRR abs/2208.07167 (2022) - [i26]Ali Mirzazadeh, Florian Dubost, Maxwell Pike, Krish Maniar, Max Zuo, Christopher Lee-Messer, Daniel L. Rubin:
ATCON: Attention Consistency for Vision Models. CoRR abs/2210.09705 (2022) - 2021
- [j7]Liansheng Wang, Cong Xie, Yi Lin, Hong-Yu Zhou, Kailin Chen, Dalong Cheng, Florian Dubost, Benjamin Collery, Bidur Khanal, Bishesh Khanal, Rong Tao, Shangliang Xu, Upasana Upadhyay Bharadwaj, Zhusi Zhong, Jie Li, Shuxin Wang, Shuo Li:
Evaluation and comparison of accurate automated spinal curvature estimation algorithms with spinal anterior-posterior X-Ray images: The AASCE2019 challenge. Medical Image Anal. 72: 102115 (2021) - [j6]Gerda Bortsova, Cristina González-Gonzalo, Suzanne C. Wetstein, Florian Dubost, Ioannis Katramados, Laurens Hogeweg, Bart Liefers, Bram van Ginneken, Josien P. W. Pluim, Mitko Veta, Clara I. Sánchez, Marleen de Bruijne:
Adversarial attack vulnerability of medical image analysis systems: Unexplored factors. Medical Image Anal. 73: 102141 (2021) - [j5]Kimberley M. Timmins, Irene C. van der Schaaf, Edwin Bennink, Ynte M. Ruigrok, Xingle An, Michael Baumgartner, Pascal Bourdon, Riccardo de Feo, Tommaso Di Noto, Florian Dubost, Augusto Fava-Sanches, Xue Feng, Corentin Giroud, Inteneural Group, Minghui Hu, Paul F. Jaeger, Juhana Kaiponen, Michal Klimont, Yuexiang Li, Hongwei Li, Yi Lin, Timo Loehr, Jun Ma, Klaus H. Maier-Hein, Guillaume Marie, Bjoern H. Menze, Jonas Richiardi, Saifeddine Rjiba, Dhaval Shah, Suprosanna Shit, Jussi Tohka, Thierry Urruty, Urszula Walinska, Xiaoping Yang, Yunqiao Yang, Yin Yin, Birgitta K. Velthuis, Hugo J. Kuijf:
Comparing methods of detecting and segmenting unruptured intracranial aneurysms on TOF-MRAS: The ADAM challenge. NeuroImage 238: 118216 (2021) - [i25]Gerda Bortsova, Florian Dubost, Laurens Hogeweg, Ioannis Katramados, Marleen de Bruijne:
Adversarial Heart Attack: Neural Networks Fooled to Segment Heart Symbols in Chest X-Ray Images. CoRR abs/2104.00139 (2021) - [i24]Siyi Tang, Jared A. Dunnmon, Khaled Saab, Xuan Zhang, Qianying Huang, Florian Dubost, Daniel L. Rubin, Christopher Lee-Messer:
Automated Seizure Detection and Seizure Type Classification From Electroencephalography With a Graph Neural Network and Self-Supervised Pre-Training. CoRR abs/2104.08336 (2021) - [i23]Florian Dubost, Khaled Kamal Saab, Erin Hong, Daniel Yang Fu, Max Pike, Siddharth Sharma, Siyi Tang, Nandita Bhaskhar, Christopher Lee-Messer, Daniel L. Rubin:
Double Descent Optimization Pattern and Aliasing: Caveats of Noisy Labels. CoRR abs/2106.02100 (2021) - [i22]Gerda Bortsova, Daniel Bos, Florian Dubost, Meike W. Vernooij, M. Kamran Ikram, Gijs van Tulder, Marleen de Bruijne:
Automated Segmentation and Volume Measurement of Intracranial Carotid Artery Calcification on Non-Contrast CT. CoRR abs/2107.09442 (2021) - [i21]Siddharth Sharma, Florian Dubost, Christopher Lee-Messer, Daniel L. Rubin:
Automated Detection of Patients in Hospital Video Recordings. CoRR abs/2111.14270 (2021) - 2020
- [j4]Florian Dubost, Marleen de Bruijne, Marco Nardin, Adrian V. Dalca, Kathleen L. Donahue, Anne-Katrin Giese, Mark R. Etherton, Ona Wu, Marius de Groot, Wiro J. Niessen, Meike W. Vernooij, Natalia S. Rost, Markus D. Schirmer:
Multi-atlas image registration of clinical data with automated quality assessment using ventricle segmentation. Medical Image Anal. 63: 101698 (2020) - [j3]Florian Dubost, Hieab Adams, Pinar Yilmaz, Gerda Bortsova, Gijs van Tulder, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
Weakly supervised object detection with 2D and 3D regression neural networks. Medical Image Anal. 65: 101767 (2020) - [c14]Subhradeep Kayal, Florian Dubost, Harm A. W. M. Tiddens, Marleen de Bruijne:
Spectral Data Augmentation Techniques to Quantify Lung Pathology from CT-Images. ISBI 2020: 586-590 - [i20]Oliver Werner, Kimberlin M. H. van Wijnen, Wiro J. Niessen, Marius de Groot, Meike W. Vernooij, Florian Dubost, Marleen de Bruijne:
When Weak Becomes Strong: Robust Quantification of White Matter Hyperintensities in Brain MRI scans. CoRR abs/2004.05578 (2020) - [i19]Subhradeep Kayal, Florian Dubost, Harm A. W. M. Tiddens, Marleen de Bruijne:
Spectral Data Augmentation Techniques to quantify Lung Pathology from CT-images. CoRR abs/2004.11989 (2020) - [i18]Suzanne C. Wetstein, Cristina González-Gonzalo, Gerda Bortsova, Bart Liefers, Florian Dubost, Ioannis Katramados, Laurens Hogeweg, Bram van Ginneken, Josien P. W. Pluim, Marleen de Bruijne, Clara I. Sánchez, Mitko Veta:
Adversarial Attack Vulnerability of Medical Image Analysis Systems: Unexplored Factors. CoRR abs/2006.06356 (2020) - [i17]Soumick Chatterjee, Kartik Prabhu, Mahantesh Pattadkal, Gerda Bortsova, Florian Dubost, Hendrik Mattern, Marleen de Bruijne, Oliver Speck, Andreas Nürnberger:
DS6: Deformation-aware learning for small vessel segmentation with small, imperfectly labeled dataset. CoRR abs/2006.10802 (2020) - [i16]Florian Dubost, Erin Hong, Daniel Y. Fu, Nandita Bhaskhar, Siyi Tang, Khaled Saab, Daniel L. Rubin, Jared Dunnmon, Christopher Lee-Messer:
Let's Hope it Works! Inaccurate Supervision of Neural Networks with Incorrect Labels: Application to Epilepsy. CoRR abs/2011.14101 (2020)
2010 – 2019
- 2019
- [j2]Florian Dubost, Hieab Adams, Gerda Bortsova, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
3D regression neural network for the quantification of enlarged perivascular spaces in brain MRI. Medical Image Anal. 51: 89-100 (2019) - [j1]Florian Dubost, Pinar Yilmaz, Hieab Adams, Gerda Bortsova, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
Enlarged perivascular spaces in brain MRI: Automated quantification in four regions. NeuroImage 185: 534-544 (2019) - [c13]Vikram Venkatraghavan, Florian Dubost, Esther E. Bron, Wiro J. Niessen, Marleen de Bruijne, Stefan Klein:
Event-Based Modeling with High-Dimensional Imaging Biomarkers for Estimating Spatial Progression of Dementia. IPMI 2019: 169-180 - [c12]Chaoping Zhang, Florian Dubost, Marleen de Bruijne, Stefan Klein, Dirk H. J. Poot:
APIR-Net: Autocalibrated Parallel Imaging Reconstruction Using a Neural Network. MLMIR@MICCAI 2019: 36-46 - [c11]Florian Dubost, Benjamin Collery, Antonin Renaudier, Axel Roc, Nicolas Posocco, Wiro J. Niessen, Marleen de Bruijne:
Automated Estimation of the Spinal Curvature via Spine Centerline Extraction with Ensembles of Cascaded Neural Networks. CSI@MICCAI 2019: 88-94 - [c10]Bernhard Egger, Markus D. Schirmer, Florian Dubost, Marco J. Nardin, Natalia S. Rost, Polina Golland:
Patient-Specific Conditional Joint Models of Shape, Image Features and Clinical Indicators. MICCAI (4) 2019: 93-101 - [c9]Florian Dubost, Max Dünnwald, Denver Huff, Vincent Scheumann, Frank Schreiber, Meike W. Vernooij, Wiro J. Niessen, Martin Skalej, Stefanie Schreiber, Steffen Oeltze-Jafra, Marleen de Bruijne:
Automated Quantification of Enlarged Perivascular Spaces in Clinical Brain MRI Across Sites. OR/MLCN@MICCAI 2019: 103-111 - [c8]Kimberlin M. H. van Wijnen, Florian Dubost, Pinar Yilmaz, Mohammad Arfan Ikram, Wiro J. Niessen, Hieab Adams, Meike W. Vernooij, Marleen de Bruijne:
Automated Lesion Detection by Regressing Intensity-Based Distance with a Neural Network. MICCAI (4) 2019: 234-242 - [c7]Florian Dubost, Gerda Bortsova, Hieab Adams, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
Hydranet: Data Augmentation for Regression Neural Networks. MICCAI (4) 2019: 438-446 - [c6]Gerda Bortsova, Florian Dubost, Laurens Hogeweg, Ioannis Katramados, Marleen de Bruijne:
Semi-supervised Medical Image Segmentation via Learning Consistency Under Transformations. MICCAI (6) 2019: 810-818 - [i15]Vikram Venkatraghavan, Florian Dubost, Esther E. Bron, Wiro J. Niessen, Marleen de Bruijne, Stefan Klein:
Event-Based Modeling with High-Dimensional Imaging Biomarkers for Estimating Spatial Progression of Dementia. CoRR abs/1903.03386 (2019) - [i14]Florian Dubost, Hieab Adams, Pinar Yilmaz, Gerda Bortsova, Gijs van Tulder, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
Weakly Supervised Object Detection with 2D and 3D Regression Neural Networks. CoRR abs/1906.01891 (2019) - [i13]Florian Dubost, Marleen de Bruijne, Marco Nardin, Adrian V. Dalca, Kathleen L. Donahue, Anne-Katrin Giese, Mark R. Etherton, Ona Wu, Marius de Groot, Wiro J. Niessen, Meike W. Vernooij, Natalia S. Rost, Markus D. Schirmer:
Automated Image Registration Quality Assessment Utilizing Deep-learning based Ventricle Extraction in Clinical Data. CoRR abs/1907.00695 (2019) - [i12]Bernhard Egger, Markus D. Schirmer, Florian Dubost, Marco J. Nardin, Natalia S. Rost, Polina Golland:
Patient-specific Conditional Joint Models of Shape, Image Features and Clinical Indicators. CoRR abs/1907.07783 (2019) - [i11]Kimberlin M. H. van Wijnen, Florian Dubost, Pinar Yilmaz, Mohammad Arfan Ikram, Wiro J. Niessen, Hieab Adams, Meike W. Vernooij, Marleen de Bruijne:
Automated Lesion Detection by Regressing Intensity-Based Distance with a Neural Network. CoRR abs/1907.12452 (2019) - [i10]Chaoping Zhang, Florian Dubost, Marleen de Bruijne, Stefan Klein, Dirk H. J. Poot:
APIR-Net: Autocalibrated Parallel Imaging Reconstruction using a Neural Network. CoRR abs/1909.09006 (2019) - [i9]Florian Dubost, Benjamin Collery, Antonin Renaudier, Axel Roc, Nicolas Posocco, Gerda Bortsova, Wiro J. Niessen, Marleen de Bruijne:
Automated Estimation of the Spinal Curvature via Spine Centerline Extraction with Ensembles of Cascaded Neural Networks. CoRR abs/1911.01126 (2019) - [i8]Gerda Bortsova, Florian Dubost, Laurens Hogeweg, Ioannis Katramados, Marleen de Bruijne:
Semi-Supervised Medical Image Segmentation via Learning Consistency under Transformations. CoRR abs/1911.01218 (2019) - 2018
- [c5]Gerda Bortsova, Florian Dubost, Silas N. Ørting, Ioannis Katramados, Laurens Hogeweg, Laura H. Thomsen, Mathilde M. W. Wille, Marleen de Bruijne:
Deep Learning from Label Proportions for Emphysema Quantification. MICCAI (2) 2018: 768-776 - [c4]Filipe Marques, Florian Dubost, Mariette Kemner-van de Corput, Harm A. W. M. Tiddens, Marleen de Bruijne:
Quantification of lung abnormalities in cystic fibrosis using deep networks. Medical Imaging: Image Processing 2018: 105741G - [i7]Florian Dubost, Hieab Adams, Gerda Bortsova, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
3D Regression Neural Network for the Quantification of Enlarged Perivascular Spaces in Brain MRI. CoRR abs/1802.05914 (2018) - [i6]Filipe Marques, Florian Dubost, Mariette Kemner-van de Corput, Harm A. W. M. Tiddens, Marleen de Bruijne:
Quantification of Lung Abnormalities in Cystic Fibrosis using Deep Networks. CoRR abs/1803.07991 (2018) - [i5]Florian Dubost, Gerda Bortsova, Hieab Adams, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
Hydranet: Data Augmentation for Regression Neural Networks. CoRR abs/1807.04798 (2018) - [i4]Gerda Bortsova, Florian Dubost, Silas N. Ørting, Ioannis Katramados, Laurens Hogeweg, Laura H. Thomsen, Mathilde M. W. Wille, Marleen de Bruijne:
Deep Learning from Label Proportions for Emphysema Quantification. CoRR abs/1807.08601 (2018) - 2017
- [c3]Florian Dubost, Gerda Bortsova, Hieab Adams, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
GP-Unet: Lesion Detection from Weak Labels with a 3D Regression Network. MICCAI (3) 2017: 214-221 - [c2]Gerda Bortsova, Gijs van Tulder, Florian Dubost, Tingying Peng, Nassir Navab, Aad van der Lugt, Daniel Bos, Marleen de Bruijne:
Segmentation of Intracranial Arterial Calcification with Deeply Supervised Residual Dropout Networks. MICCAI (3) 2017: 356-364 - [i3]Florian Dubost, Gerda Bortsova, Hieab Adams, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Marleen de Bruijne:
GP-Unet: Lesion Detection from Weak Labels with a 3D Regression Network. CoRR abs/1705.07999 (2017) - [i2]Gerda Bortsova, Gijs van Tulder, Florian Dubost, Tingying Peng, Nassir Navab, Aad van der Lugt, Daniel Bos, Marleen de Bruijne:
Segmentation of Intracranial Arterial Calcification with Deeply Supervised Residual Dropout Networks. CoRR abs/1706.01148 (2017) - 2016
- [c1]Florian Dubost, Loïc Peter, Christian Rupprecht, Benjamín Gutiérrez-Becker, Nassir Navab:
Hands-Free Segmentation of Medical Volumes via Binary Inputs. LABELS/DLMIA@MICCAI 2016: 259-268 - [i1]Florian Dubost, Loïc Peter, Christian Rupprecht, Benjamín Gutiérrez-Becker, Nassir Navab:
Hands-Free Segmentation of Medical Volumes via Binary Inputs. CoRR abs/1609.06192 (2016)
Coauthor Index
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