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Tobias Kuhn
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Publications
- 2024
- [i44]Margherita Martorana, Tobias Kuhn, Lise Stork, Jacco van Ossenbruggen:
Text classification of column headers with a controlled vocabulary: leveraging LLMs for metadata enrichment. CoRR abs/2403.00884 (2024) - 2023
- [j24]Cristina-Iulia Bucur, Tobias Kuhn, Davide Ceolin, Jacco van Ossenbruggen:
Nanopublication-based semantic publishing and reviewing: a field study with formalization papers. PeerJ Comput. Sci. 9: e1159 (2023) - [c47]Margherita Martorana, Tobias Kuhn, Ronald Siebes, Jacco van Ossenbruggen:
Advancing data sharing and reusability for restricted access data on the Web: introducing the DataSet-Variable Ontology. K-CAP 2023: 83-91 - [c46]Valentina Maccatrozzo, Tobias Kuhn, Davide Ceolin, Jacco van Ossenbruggen:
The Role of Serendipity in User-Curated Music Playlists. K-CAP 2023: 140-147 - [i43]Lars Vogt, Tobias Kuhn, Robert Hoehndorf:
Semantic Units: Organizing knowledge graphs into semantically meaningful units of representation. CoRR abs/2301.01227 (2023) - 2022
- [j23]Cristina-Iulia Bucur, Tobias Kuhn:
Special Issue on Semantic Publishing with Formalization Papers1. Data Sci. 5(1): 1-9 (2022) - [j22]Margherita Martorana, Tobias Kuhn, Ronald Siebes, Jacco van Ossenbruggen:
Aligning restricted access data with FAIR: a systematic review. PeerJ Comput. Sci. 8: e1038 (2022) - [c45]Al Koudous Idrissou, Veruska Zamborlini, Tobias Kuhn:
Documenting the Creation, Manipulation and Evaluation of Links for Reuse and Reproducibility. EKAW 2022: 81-96 - [c44]Olga L. Giraldo, Miguel Ruano, Robin A. Richardson, Remzi Celebi, Michel Dumontier, Tobias Kuhn:
Nanotate: Semantically Annotating Experimental Protocols with Nanopublications. SWAT4HCLS 2022: 64-73 - [i42]Cristina-Iulia Bucur, Tobias Kuhn, Davide Ceolin, Jacco van Ossenbruggen:
Nanopublication-Based Semantic Publishing and Reviewing: A Field Study with Formalization Papers. CoRR abs/2203.01608 (2022) - 2021
- [j21]Tobias Kuhn, Ruben Taelman, Vincent Emonet, Haris Antonatos, Stian Soiland-Reyes, Michel Dumontier:
Semantic micro-contributions with decentralized nanopublication services. PeerJ Comput. Sci. 7: e387 (2021) - [c43]Robin A. Richardson, Remzi Celebi, Sven van der Burg, Djura Smits, Lars Ridder, Michel Dumontier, Tobias Kuhn:
User-friendly Composition of FAIR Workflows in a Notebook Environment. K-CAP 2021: 1-8 - [c42]Cristina-Iulia Bucur, Tobias Kuhn, Davide Ceolin, Jacco van Ossenbruggen:
Expressing High-Level Scientific Claims with Formal Semantics. K-CAP 2021: 233-240 - [c41]Michel Wijkstra, Timo Lek, Tobias Kuhn, Kasper Welbers, Mickey Steijaert:
Living Literature Reviews. K-CAP 2021: 241-248 - [i41]Cristina-Iulia Bucur, Tobias Kuhn, Davide Ceolin, Jacco van Ossenbruggen:
Expressing High-Level Scientific Claims with Formal Semantics. CoRR abs/2109.12907 (2021) - [i40]Michel Wijkstra, Timo Lek, Tobias Kuhn, Kasper Welbers, Mickey Steijaert:
Living Literature Reviews. CoRR abs/2111.00824 (2021) - [i39]Robin A. Richardson, Remzi Celebi, Sven van der Burg, Djura Smits, Lars Ridder, Michel Dumontier, Tobias Kuhn:
User-friendly Composition of FAIR Workflows in a Notebook Environment. CoRR abs/2111.00831 (2021) - [i38]Anna-Lena Lamprecht, Magnus Palmblad, Jon C. Ison, Veit Schwämmle, Mohammad Sadnan Al Manir, Ilkay Altintas, Christopher J. O. Baker, Ammar Ben Hadj Amor, Salvador Capella-Gutiérrez, Paulos Charonyktakis, Michael R. Crusoe, Yolanda Gil, Carole A. Goble, Timothy J. Griffin, Paul Groth, Hans Ienasescu, Pratik D. Jagtap, Matús Kalas, Vedran Kasalica, Alireza Khanteymoori, Tobias Kuhn, Hailiang Mei, Hervé Ménager, Steffen Möller, Robin A. Richardson, Vincent Robert, Stian Soiland-Reyes, Robert Stevens, Szaniszlo Szoke, Suzan Verberne, Aswin Verhoeven, Katherine Wolstencroft:
Perspectives on automated composition of workflows in the life sciences. F1000Research 10: 897 (2021) - 2020
- [j20]Annika Jacobsen, Ricardo de Miranda Azevedo, Nick S. Juty, Dominique Batista, Simon J. Coles, Ronald Cornet, Mélanie Courtot, Mercè Crosas, Michel Dumontier, Chris T. A. Evelo, Carole A. Goble, Giancarlo Guizzardi, Karsten Kryger Hansen, Ali Hasnain, Kristina M. Hettne, Jaap Heringa, Rob W. W. Hooft, Melanie Imming, Keith G. Jeffery, Rajaram Kaliyaperumal, Martijn G. Kersloot, Christine R. Kirkpatrick, Tobias Kuhn, Ignasi Labastida, Barbara Magagna, Peter McQuilton, Natalie Meyers, Annalisa Montesanti, Mirjam van Reisen, Philippe Rocca-Serra, Robert Pergl, Susanna-Assunta Sansone, Luiz Olavo Bonino da Silva Santos, Juliane Schneider, George O. Strawn, Mark Thompson, Andra Waagmeester, Tobias Weigel, Mark D. Wilkinson, Egon L. Willighagen, Peter Wittenburg, Marco Roos, Barend Mons, Erik Schultes:
FAIR Principles: Interpretations and Implementation Considerations. Data Intell. 2(1-2): 10-29 (2020) - [j19]Hana Pergl Sustkova, Kristina Maria Hettne, Peter Wittenburg, Annika Jacobsen, Tobias Kuhn, Robert Pergl, Jan Slifka, Peter McQuilton, Barbara Magagna, Susanna-Assunta Sansone, Markus Stocker, Melanie Imming, Larry Lannom, Mark A. Musen, Erik Schultes:
FAIR Convergence Matrix: Optimizing the Reuse of Existing FAIR-Related Resources. Data Intell. 2(1-2): 158-170 (2020) - [j18]Remzi Celebi, Joao Rebelo Moreira, Ahmed A. Hassan, Sandeep Ayyar, Lars Ridder, Tobias Kuhn, Michel Dumontier:
Towards FAIR protocols and workflows: the OpenPREDICT use case. PeerJ Comput. Sci. 6: e281 (2020) - [c40]Cristina-Iulia Bucur, Tobias Kuhn, Davide Ceolin:
A Unified Nanopublication Model for Effective and User-Friendly Access to the Elements of Scientific Publishing. EKAW 2020: 104-119 - [c39]Erik Schultes, Barbara Magagna, Kristina Maria Hettne, Robert Pergl, Marek Suchánek, Tobias Kuhn:
Reusable FAIR Implementation Profiles as Accelerators of FAIR Convergence. ER (Workshops) 2020: 138-147 - [i37]Timo Lek, Anna de Groot, Tobias Kuhn, Roser Morante:
Provenance for Linguistic Corpora Through Nanopublications. CoRR abs/2006.06341 (2020) - [i36]Cristina-Iulia Bucur, Tobias Kuhn, Davide Ceolin:
A Unified Nanopublication Model for Effective and User-Friendly Access to the Elements of Scientific Publishing. CoRR abs/2006.06348 (2020) - 2019
- [j17]Niels Dekker, Tobias Kuhn, Marieke van Erp:
Evaluating named entity recognition tools for extracting social networks from novels. PeerJ Comput. Sci. 5: e189 (2019) - [c36]Cristina-Iulia Bucur, Tobias Kuhn, Davide Ceolin:
Peer Reviewing Revisited: Assessing Research with Interlinked Semantic Comments. K-CAP 2019: 179-187 - [c35]Pasquale Lisena, Albert Meroño-Peñuela, Tobias Kuhn, Raphaël Troncy:
Easy Web API Development with SPARQL Transformer. ISWC (2) 2019: 454-470 - [i35]Peter Wittenburg, Hana Pergl Sustkova, Annalisa Montesanti, Margreet Bloemers, S. H. de Waard, Mark A. Musen, John Graybeal, Kristina M. Hettne, Annika Jacobsen, Robert Pergl, Rob W. W. Hooft, Christine Staiger, Celia W. G. van Gelder, Sebastiaan L. Knijnenburg, A. C. van Arkel, Bert Meerman, Mark D. Wilkinson, Susanna-Assunta Sansone, Philippe Rocca-Serra, Peter McQuilton, Alejandra N. González-Beltrán, G. J. C. Aben, Patrícia Henning, Maria Simone de Menezes Alencar, C. Ribeiro, C. R. L. Silva, Luís Fernando Sayão, Luana Sales, Viviane Veiga, Jefferson Lima, Simone Dib, Paula Xavier dos Santos, R. Murtinho, Jakob Tendel, B. F. Schaap, P. M. Brouwer, A. K. Gavai, Yamine Bouzembrak, Hans J. P. Marvin, Albert Mons, Tobias Kuhn, A. A. Gambardella, Ricardo de Miranda Azevedo, Vesa Muhonen, Mira van der Naald, N. W. Smit, M. J. Buys, Taco F. de Bruin, Fieke Schoots, H. J. E. Goodson, Henry S. Rzepa, Keith G. Jeffery, Hugh P. Shanahan, M. Axton, Veniamin Tkachenko, Anne Deslattes Mays, Natalie Meyers, Michael Conlon, Laurel L. Haak, Erik A. Schultes:
The FAIR Funder pilot programme to make it easy for funders to require and for grantees to produce FAIR Data. CoRR abs/1902.11162 (2019) - [i33]Cristina-Iulia Bucur, Tobias Kuhn, Davide Ceolin:
Peer Reviewing Revisited: Assessing Research with Interlinked Semantic Comments. CoRR abs/1910.03218 (2019) - [i32]Remzi Celebi, Joao Rebelo Moreira, Ahmed A. Hassan, Sandeep Ayyar, Lars Ridder, Tobias Kuhn, Michel Dumontier:
Towards FAIR protocols and workflows: The OpenPREDICT case study. CoRR abs/1911.09531 (2019) - 2018
- [c33]Tobias Kuhn, Albert Meroño-Peñuela, Alexander Malic, Jorrit H. Poelen, Allen H. Hurlbert, Emilio Centeno Ortiz, Laura I. Furlong, Núria Queralt-Rosinach, Christine Chichester, Juan M. Banda, Egon L. Willighagen, Friederike Ehrhart, Chris T. A. Evelo, Tareq B. Malas, Michel Dumontier:
Nanopublications: A Growing Resource of Provenance-Centric Scientific Linked Data. eScience 2018: 83-92 - [e6]Ruben Verborgh, Tobias Kuhn, Tim Berners-Lee:
Proceedings of the 2nd Workshop on Decentralizing the Semantic Web co-located with the 17th International Semantic Web Conference, DeSemWeb@ISWC 2018, Monterey, California, USA, October 8, 2018. CEUR Workshop Proceedings 2165, CEUR-WS.org 2018 [contents] - [e5]Daniel Garijo, Natalia Villanueva-Rosales, Tobias Kuhn, Tomi Kauppinen, Michel Dumontier:
Proceedings of the Second Workshop on Enabling Open Semantic Science co-located with 17th International Semantic Web Conference, SemSci@ISWC 2018, Monterey, California, USA, October 8-12th, 2018. CEUR Workshop Proceedings 2184, CEUR-WS.org 2018 [contents] - [i30]Tobias Kuhn, Albert Meroño-Peñuela, Alexander Malic, Jorrit H. Poelen, Allen H. Hurlbert, Emilio Centeno, Laura I. Furlong, Núria Queralt-Rosinach, Christine Chichester, Juan M. Banda, Egon L. Willighagen, Friederike Ehrhart, Chris T. A. Evelo, Tareq B. Malas, Michel Dumontier:
Nanopublications: A Growing Resource of Provenance-Centric Scientific Linked Data. CoRR abs/1809.06532 (2018) - [i29]Niels Dekker, Tobias Kuhn, Marieke van Erp:
Evaluating social network extraction for classic and modern fiction literature. PeerJ Prepr. 6: e27263 (2018) - 2017
- [j15]Michel Dumontier, Tobias Kuhn:
Data Science - Methods, infrastructure, and applications. Data Sci. 1(1-2): 1-5 (2017) - [j14]Tobias Kuhn, Michel Dumontier:
Genuine semantic publishing. Data Sci. 1(1-2): 139-154 (2017) - [j12]Brian Davis, Tobias Kuhn, Kaarel Kaljurand:
LRE journal CNL introduction. Lang. Resour. Evaluation 51(1): 9-11 (2017) - [j11]Kurt Winkler, Tobias Kuhn:
Fully automatic multi-language translation with a catalogue of phrases: successful employment for the Swiss avalanche bulletin. Lang. Resour. Evaluation 51(1): 13-35 (2017) - [c32]Krishna Mangaladevi, Wouter Beek, Tobias Kuhn:
Understanding Knowledge Networks. LD4IE@ISWC 2017: 38-49 - [c31]Tobias Kuhn, Egon L. Willighagen, Chris T. A. Evelo, Núria Queralt-Rosinach, Emilio Centeno, Laura I. Furlong:
Reliable Granular References to Changing Linked Data. ISWC (1) 2017: 436-451 - [c30]Benjamin Timmermans, Tobias Kuhn, Kaspar Beelen, Lora Aroyo:
Computational Controversy. SocInfo (2) 2017: 288-300 - [e4]Daniel Garijo, Willem Robert van Hage, Tomi Kauppinen, Tobias Kuhn, Jun Zhao:
Proceedings of the First Workshop on Enabling Open Semantic Science co-located with 16th International Semantic Web Conference (ISWC 2017), Vienna, Austria, October 21st, 2017. CEUR Workshop Proceedings 1931, CEUR-WS.org 2017 [contents] - [e3]Ruben Verborgh, Tobias Kuhn, Andrei Sambra:
Proceedings of the Workshop on Decentralizing the Semantic Web 2017 co-located with 16th International Semantic Web Conference (ISWC 2017). CEUR Workshop Proceedings 1934, CEUR-WS.org 2017 [contents] - [i28]Benjamin Timmermans, Tobias Kuhn, Kaspar Beelen, Lora Aroyo:
Computational Controversy. CoRR abs/1706.07643 (2017) - [i26]Tobias Kuhn, Egon L. Willighagen, Chris T. A. Evelo, Núria Queralt-Rosinach, Emilio Centeno, Laura I. Furlong:
Reliable Granular References to Changing Linked Data. CoRR abs/1708.09193 (2017) - 2016
- [j9]Tobias Kuhn, Christine Chichester, Michael Krauthammer, Núria Queralt-Rosinach, Ruben Verborgh, George Giannakopoulos, Axel-Cyrille Ngonga Ngomo, Raffaele Viglianti, Michel Dumontier:
Decentralized provenance-aware publishing with nanopublications. PeerJ Comput. Sci. 2: e78 (2016) - [j8]Núria Queralt-Rosinach, Tobias Kuhn, Christine Chichester, Michel Dumontier, Ferran Sanz, Laura I. Furlong:
Publishing DisGeNET as nanopublications. Semantic Web 7(5): 519-528 (2016) - [c27]Niels Ockeloen, Victor de Boer, Tobias Kuhn, Guus Schreiber:
Data 2 Documents: Modular and Distributive Content Management in RDF. EKAW 2016: 447-462 - [i24]Tobias Kuhn, Christine Chichester, Michael Krauthammer, Núria Queralt-Rosinach, Ruben Verborgh, George Giannakopoulos, Axel-Cyrille Ngonga Ngomo, Raffaele Viglianti, Michel Dumontier:
Decentralized provenance-aware publishing with nanopublications. PeerJ Prepr. 4: e1760 (2016) - 2015
- [j7]Kaarel Kaljurand, Tobias Kuhn, Laura Canedo:
Collaborative multilingual knowledge management based on controlled natural language. Semantic Web 6(3): 241-258 (2015) - [j6]Tobias Kuhn, Michel Dumontier:
Making Digital Artifacts on the Web Verifiable and Reliable. IEEE Trans. Knowl. Data Eng. 27(9): 2390-2400 (2015) - [c25]Juan M. Banda, Tobias Kuhn, Nigam H. Shah, Michel Dumontier:
Provenance-Centered Dataset of Drug-Drug Interactions. ISWC (2) 2015: 293-300 - [c24]Tobias Kuhn, Christine Chichester, Michael Krauthammer, Michel Dumontier:
Publishing Without Publishers: A Decentralized Approach to Dissemination, Retrieval, and Archiving of Data. ISWC (1) 2015: 656-672 - [i22]Tobias Kuhn, Michel Dumontier:
Making Digital Artifacts on the Web Verifiable and Reliable. CoRR abs/1507.01697 (2015) - [i20]Juan M. Banda, Tobias Kuhn, Nigam H. Shah, Michel Dumontier:
Provenance-Centered Dataset of Drug-Drug Interactions. CoRR abs/1507.05408 (2015) - [i18]Kurt Winkler, Tobias Kuhn:
Fully automatic multi-language translation with a catalogue of phrases - successful employment for the Swiss avalanche bulletin. CoRR abs/1509.06937 (2015) - 2014
- [j5]Tobias Kuhn, Mate Levente Nagy, Thaibinh Luong, Michael Krauthammer:
Mining images in biomedical publications: Detection and analysis of gel diagrams. J. Biomed. Semant. 5: 10 (2014) - [c22]Kurt Winkler, Tobias Kuhn, Martin Volk:
Evaluating the Fully Automatic Multi-language Translation of the Swiss Avalanche Bulletin. CNL 2014: 44-54 - [c21]Tobias Kuhn, Michel Dumontier:
Trusty URIs: Verifiable, Immutable, and Permanent Digital Artifacts for Linked Data. ESWC 2014: 395-410 - [c20]Tobias Kuhn, Michel Dumontier:
Erratum: Trusty URIs: Verifiable, Immutable, and Permanent Digital Artifacts for Linked Data. ESWC 2014 - [e2]Brian Davis, Kaarel Kaljurand, Tobias Kuhn:
Controlled Natural Language - 4th International Workshop, CNL 2014, Galway, Ireland, August 20-22, 2014. Proceedings. Lecture Notes in Computer Science 8625, Springer 2014, ISBN 978-3-319-10222-1 [contents] - [i17]Tobias Kuhn, Michel Dumontier:
Hash-URIs for Verifiable, Immutable, and Permanent Digital Artifacts. CoRR abs/1401.5775 (2014) - [i16]Tobias Kuhn, Mate Levente Nagy, Thaibinh Luong, Michael Krauthammer:
Mining Images in Biomedical Publications: Detection and Analysis of Gel Diagrams. CoRR abs/1402.2073 (2014) - [i15]Tobias Kuhn, Matjaz Perc, Dirk Helbing:
Inheritance patterns in citation networks reveal scientific memes. CoRR abs/1404.3757 (2014) - [i14]Kurt Winkler, Tobias Kuhn, Martin Volk:
Evaluating the fully automatic multi-language translation of the Swiss avalanche bulletin. CoRR abs/1405.6103 (2014) - [i13]Tobias Kuhn, Christine Chichester, Michel Dumontier, Michael Krauthammer:
Publishing without Publishers: a Decentralized Approach to Dissemination, Retrieval, and Archiving of Data. CoRR abs/1411.2749 (2014) - 2013
- [c19]Mark V. Mai, Tobias Kuhn, José Costa, Michael Krauthammer:
Nanorecords: A Novel Approach to Communicating High-Level Medical Information. AMIA 2013 - [c18]Kaarel Kaljurand, Tobias Kuhn:
A Multilingual Semantic Wiki Based on Attempto Controlled English and Grammatical Framework. ESWC 2013: 427-441 - [c17]Tobias Kuhn, Paolo Emilio Barbano, Mate Levente Nagy, Michael Krauthammer:
Broadening the Scope of Nanopublications. ESWC 2013: 487-501 - [i12]Tobias Kuhn, Paolo Emilio Barbano, Mate Levente Nagy, Michael Krauthammer:
Broadening the Scope of Nanopublications. CoRR abs/1303.2446 (2013) - [i11]Kaarel Kaljurand, Tobias Kuhn:
A Multilingual Semantic Wiki Based on Attempto Controlled English and Grammatical Framework. CoRR abs/1303.4293 (2013) - 2012
- [c16]Tobias Kuhn, Thaibinh Luong, Michael Krauthammer:
Finding and Accessing Diagrams in Biomedical Publications. AMIA 2012 - [c15]Tobias Kuhn, Michael Krauthammer:
Underspecified Scientific Claims in Nanopublications. WoLE@ISWC 2012: 29-32 - [e1]Tobias Kuhn, Norbert E. Fuchs:
Controlled Natural Language - Third International Workshop, CNL 2012, Zurich, Switzerland, August 29-31, 2012. Proceedings. Lecture Notes in Computer Science 7427, Springer 2012, ISBN 978-3-642-32611-0 [contents] - [i9]Tobias Kuhn, Michael Krauthammer:
Image Mining from Gel Diagrams in Biomedical Publications. CoRR abs/1209.1481 (2012) - [i8]Tobias Kuhn, Michael Krauthammer:
Underspecified Scientific Claims in Nanopublications. CoRR abs/1209.1483 (2012) - 2009
- [c11]Richard N. Shiffman, George Michel, Michael Krauthammer, Norbert E. Fuchs, Kaarel Kaljurand, Tobias Kuhn:
Writing Clinical Practice Guidelines in Controlled Natural Language. CNL 2009: 265-280 - [c10]Richard N. Shiffman, George Michel, Michael Krauthammer, Norbert E. Fuchs, Kaarel Kaljurand, Tobias Kuhn:
Controlled Natural Language for Clinical Practice Guidelines. CNL (Pre-Proceedings) 2009 - [c9]Adam Z. Wyner, Krasimir Angelov, Guntis Barzdins, Danica Damljanovic, Brian Davis, Norbert E. Fuchs, Stefan Höfler, Ken Jones, Kaarel Kaljurand, Tobias Kuhn:
On Controlled Natural Languages: Properties and Prospects. CNL 2009: 281-289 - [p1]Juri Luca De Coi, Norbert E. Fuchs, Kaarel Kaljurand, Tobias Kuhn:
Controlled English for Reasoning on the Semantic Web. REWERSE 2009: 276-308 - 2008
- [c7]Tobias Kuhn, Rolf Schwitter:
Writing Support for Controlled Natural Languages. ALTA 2008: 46-54 - [c6]Norbert E. Fuchs, Kaarel Kaljurand, Tobias Kuhn:
Attempto Controlled English for Knowledge Representation. Reasoning Web 2008: 104-124 - 2007
- [c3]Gerold Schneider, Kaarel Kaljurand, Fabio Rinaldi, Tobias Kuhn:
Pro3Gres Parser in the CoNLL Domain Adaptation Shared Task. EMNLP-CoNLL 2007: 1161-1165 - 2006
- [c1]Tobias Kuhn, Loïc Royer, Norbert E. Fuchs, Michael Schroeder:
Improving Text Mining with Controlled Natural Language: A Case Study for Protein Interactions. DILS 2006: 66-81
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