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Journal of Cheminformatics, Volume 1
Volume 1, 2009
- David J. Wild:

Grand challenges for cheminformatics. 1 - Steven M. Bachrach

:
Chemistry publication - making the revolution. 2 - Mikhail E. Elyashberg, Kirill A. Blinov, Sergey G. Molodtsov, Yegor D. Smurnyy, Antony J. Williams

, Tatiana S. Churanova:
Computer-assisted methods for molecular structure elucidation: realizing a spectroscopist's dream. 3 - William W. L. Wong

, Forbes J. Burkowski:
A constructive approach for discovering new drug leads: Using a kernel methodology for the inverse-QSAR problem. 4 - Beining Chen, Christoph Müller, Peter Willett:

Evaluation of a Bayesian inference network for ligand-based virtual screening. 5 - Megan L. Peach

, Marc C. Nicklaus
:
Combining docking with pharmacophore filtering for improved virtual screening. 6 - Ramzi Nasr, Sanjay Joshua Swamidass

, Pierre Baldi:
Large scale study of multiple-molecule queries. 7 - Peter Ertl

, Ansgar Schuffenhauer:
Estimation of synthetic accessibility score of drug-like molecules based on molecular complexity and fragment contributions. 8 - Jean-Claude Bradley

, Robert J. Lancashire
, Andrew S. I. D. Lang, Antony J. Williams
:
The Spectral Game: leveraging Open Data and crowdsourcing for education. 9 - Christopher Southan

, Péter L. Várkonyi, Sorel Muresan
:
Quantitative assessment of the expanding complementarity between public and commercial databases of bioactive compounds. 10 - Robert D. Clark

:
DPRESS: Localizing estimates of predictive uncertainty. 11 - Syed Asad Rahman

, Matthew Bashton
, Gemma L. Holliday
, Rainer Schrader
, Janet M. Thornton
:
Small Molecule Subgraph Detector (SMSD) toolkit. 12 - Tobias Lippert, Matthias Rarey

:
Fast automated placement of polar hydrogen atoms in protein-ligand complexes. 13 - Andreas Jahn

, Georg Hinselmann, Nikolas Fechner, Andreas Zell:
Optimal assignment methods for ligand-based virtual screening. 14 - Zsolt Bikádi, Eszter Hazai:

Application of the PM6 semi-empirical method to modeling proteins enhances docking accuracy of AutoDock. 15 - Jimmy Rosen, Laurence Miguet, Serge Pérez:

Shape: automatic conformation prediction of carbohydrates using a genetic algorithm. 16 - Mark Rijnbeek, Christoph Steinbeck

:
OrChem - An open source chemistry search engine for Oracle®. 17 - Tobias Kind

, Tim Leamy, Julie A. Leary, Oliver Fiehn:
Software platform virtualization in chemistry research and university teaching. 18 - Vishwesh Venkatraman

, Padmasini Chakravarthy, Daisuke Kihara:
Application of 3D Zernike descriptors to shape-based ligand similarity searching. 19 - Wolf-Dietrich Ihlenfeldt, Evan Bolton

, Stephen H. Bryant:
The PubChem chemical structure sketcher. 20 - Amanda C. Schierz:

Virtual screening of bioassay data. 21 - Benson M. Spowage, Craig L. Bruce, Jonathan D. Hirst

:
Interpretable correlation descriptors for quantitative structure-activity relationships. 22

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