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ORCIDBMC Genomics, Volume 19 - Supplements
Volume 19, Number S-2, May 2018
- Yu-Chen Liu
, Hsiao-Chin Hong, Chi-Dung Yang, Wei-Hsiang Lee, Hsin-Tzu Huang, Hsien-Da Huang:
Ouroboros resembling competitive endogenous loop (ORCEL) in circular RNAs revealed through transcriptome sequencing dataset analysis. - Emmanuel Noutahi, Nadia El-Mabrouk:
GATC: a genetic algorithm for gene tree construction under the Duplication-Transfer-Loss model of evolution. - Po-Jung Huang, Chi-Ching Lee, Ling-Ya Chiu, Kuo-Yang Huang, Yuan-Ming Yeh, Chia-Yu Yang, Cheng-Hsun Chiu, Petrus Tang:
VAReporter: variant reporter for cancer research of massive parallel sequencing. - Chih-Hung Chou, Hsi-Yuan Huang, Wei-Chih Huang, Sheng-Da Hsu, Chung-Der Hsiao, Chia-Yu Liu, Yu-Hung Chen, Yu-Chen Liu, Wei-Yun Huang, Meng-Lin Lee, Yi-Chang Chen, Hsien-Da Huang:
The aquatic animals' transcriptome resource for comparative functional analysis. - Chunfang Zheng, Yuji Jeong, Madisyn Gabrielle Turcotte, David Sankoff:
Resolution effects in reconstructing ancestral genomes. - Chi-Nga Chow, Yi-Fan Chiang-Hsieh, Chia-Hung Chien, Han-Qin Zheng, Tzong-Yi Lee, Nai-Yun Wu, Kuan-Chieh Tseng, Ping-Fu Hou, Wen-Chi Chang:
Delineation of condition specific Cis- and Trans-acting elements in plant promoters under various Endo- and exogenous stimuli. - Xinrui Zhou, Jie Zheng, Fransiskus Xaverius Ivan, Rui Yin, Shoba Ranganathan, Vincent T. K. Chow, Chee-Keong Kwoh:
Computational analysis of the receptor binding specificity of novel influenza A/H7N9 viruses. - Yoann Anselmetti, Wandrille Duchemin, Eric Tannier, Cédric Chauve, Sèverine Bérard:
Phylogenetic signal from rearrangements in 18 Anopheles species by joint scaffolding extant and ancestral genomes. - Li Liu, Shuchao Ren, Junqiang Guo, Qingyi Wang, Xiaotuo Zhang, Peiran Liao, Shipeng Li, Ramanjulu Sunkar, Yun Zheng:
Genome-wide identification and comprehensive analysis of microRNAs and phased small interfering RNAs in watermelon. - Jeremie S. Kim, Damla Senol Cali, Hongyi Xin, Donghyuk Lee, Saugata Ghose, Mohammed Alser, Hasan Hassan, Oguz Ergin, Can Alkan, Onur Mutlu:
GRIM-Filter: Fast seed location filtering in DNA read mapping using processing-in-memory technologies. - Dan He, Subrata Saha, Richard Finkers, Laxmi Parida:
Efficient algorithms for polyploid haplotype phasing. - Yoonha Choi, Tiffany Ting Liu, Daniel G. Pankratz, Thomas V. Colby, Neil M. Barth, David A. Lynch, P. Sean Walsh, Ganesh Raghu, Giulia C. Kennedy, Jing Huang:
Identification of usual interstitial pneumonia pattern using RNA-Seq and machine learning: challenges and solutions. - Wanwen Zeng, Mengmeng Wu, Rui Jiang:
Prediction of enhancer-promoter interactions via natural language processing. - Daniel Valenzuela, Tuukka Norri, Niko Välimäki, Esa Pitkänen, Veli Mäkinen:
Towards pan-genome read alignment to improve variation calling. - Wen Chen, Xuan Zhang, Jing Li, Shulan Huang, Shuanglin Xiang, Xiang Hu, Changning Liu:
Comprehensive analysis of coding-lncRNA gene co-expression network uncovers conserved functional lncRNAs in zebrafish.
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