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Journal of Biomedical Semantics, Volume 12
Volume 12, Number 1, December 2021
- Nicholas Nicholson, Francesco Giusti, Manola Bettio, Raquel Negrao Carvalho, Nadya Dimitrova, Tadeusz Dyba, Manuela Flego, Luciana Neamtiu, Giorgia Randi, Carmen Martos:
An ontology-based approach for developing a harmonised data-validation tool for European cancer registration. 1 - Kody Moodley, Linda Rieswijk, Tudor I. Oprea, Michel Dumontier:
InContext: curation of medical context for drug indications. 2 - Haiyang Yang, Li Kuang, FengQiang Xia:
Multimodal temporal-clinical note network for mortality prediction. 3 - Emma Norris, Janna Hastings, Marta M. Marques, Ailbhe N. Finnerty, Silje Zink, Susan Michie:
Why and how to engage expert stakeholders in ontology development: insights from social and behavioural sciences. 4 - Andreea Grigoriu, Amrapali Zaveri, Gerhard Weiss, Michel Dumontier:
SIENA: Semi-automatic semantic enhancement of datasets using concept recognition. 5 - Irene Pérez-Díez, Raúl Pérez-Moraga, Adolfo López-Cerdán, Jose-Maria Salinas-Serrano, María de la Iglesia-Vayá:
De-identifying Spanish medical texts - named entity recognition applied to radiology reports. 6 - Luke T. Slater, William Bradlow, Simon Ball, Robert Hoehndorf, Georgios V. Gkoutos:
Improved characterisation of clinical text through ontology-based vocabulary expansion. 7 - Alyson Maslowski, Halim Abbas, Kelley Abrams, Sharief Taraman, Ford Garberson, Susan Segar:
Project Rosetta: a childhood social, emotional, and behavioral developmental feature mapping. 8 - Ayeh Naghizadeh, Mahdi Salamat, Donya Hamzeian, Shaghayegh Akbari, Hossein Rezaeizadeh, Mahdi Alizadeh Vaghasloo, Reza Karbalaei, Mehdi Mirzaie, Mehrdad Karimi, Mohieddin Jafari:
IrGO: Iranian traditional medicine General Ontology and knowledge base. 9 - Ivano Lauriola, Fabio Aiolli, Alberto Lavelli, Fabio Rinaldi:
Learning adaptive representations for entity recognition in the biomedical domain. 10 - Pål H. Brekke, Taraka Rama, Ildikó Pilán, Øystein Nytrø, Lilja Øvrelid:
Synthetic data for annotation and extraction of family history information from clinical text. 11 - Olga Majewska, Charlotte Collins, Simon Baker, Jari Björne, Susan Windisch Brown, Anna Korhonen, Martha Palmer:
BioVerbNet: a large semantic-syntactic classification of verbs in biomedicine. 12 - Shane Babcock, John Beverley, Lindsay G. Cowell, Barry Smith:
The Infectious Disease Ontology in the age of COVID-19. 13 - Ton E. Becker, Eric Jakobsson:
ResidueFinder: extracting individual residue mentions from protein literature. 14 - C. Maria Keet, Rolf Grütter:
Toward a systematic conflict resolution framework for ontologies. 15 - Joël Legrand, Yannick Toussaint, Chedy Raïssi, Adrien Coulet:
Syntax-based transfer learning for the task of biomedical relation extraction. 16 - Senay Kafkas, Sara Althubaiti, Georgios V. Gkoutos, Robert Hoehndorf, Paul N. Schofield:
Linking common human diseases to their phenotypes; development of a resource for human phenomics. 17 - Anthony Huffman, Anna Maria Masci, Jie Zheng, Nasim Sanati, Timothy Brunson, Guanming Wu, Yongqun He:
CIDO ontology updates and secondary analysis of host responses to COVID-19 infection based on ImmPort reports and literature. 18 - Cecilia Reyes Peña, Mireya Tovar, Maricela Bravo, Regina Motz:
An ontology network for Diabetes Mellitus in Mexico. 19 - Lars Vogt:
FAIR data representation in times of eScience: a comparison of instance-based and class-based semantic representations of empirical data using phenotype descriptions as example. 20 - Xuelin Gu, Banghua Yang, Shouwei Gao, Lin Feng Yan, Ding Xu, Wen Wang:
Prefrontal fNIRS-based clinical data analysis of brain functions in individuals abusing different types of drugs. 21 - Dalei Jiang, Yin Wang, Feng Zhou, Hongtao Ma, Wenting Zhang, Weijia Fang, Peng Zhao, Zhou Tong:
Residual refinement for interactive skin lesion segmentation. 22
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