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ORCIDJournal of Biomedical Informatics, Volume 57
Volume 57, October 2015
- Bin Liu, Min Jin, Pan Zeng
:
Prioritization of candidate disease genes by combining topological similarity and semantic similarity. 1-5 - Samira Noferesti, Mehrnoush Shamsfard:
Using Linked Data for polarity classification of patients' experiences. 6-19 - Jianxu Zhu, Ran Liu, Zhibin Jiang, Peilian Wang, Yang Yao, Zan Shen:
Optimization of drug regimen in chemotherapy based on semi-mechanistic model for myelosuppression. 20-27 - Robert Leaman, Ritu Khare, Zhiyong Lu:
Challenges in clinical natural language processing for automated disorder normalization. 28-37 - Yan Wen, Jingcan Hao, Xiong Guo, Xiao Xiao, Cuiyan Wu, Sen Wang, Tielin Yang, Hui Shen, Xiangding Chen, Lijun Tan, Qing Tian, Hong-Wen Deng, Feng Zhang:
SWGDT: A sliding window-based genotype dependence testing tool for genome-wide susceptibility gene scan. 38-41 - Claire L. Gordon, Chunhua Weng:
Combining expert knowledge and knowledge automatically acquired from electronic data sources for continued ontology evaluation and improvement. 42-52 - Patricia Flatley Brennan, Kevin Ponto, Gail R. Casper, Ross Tredinnick, Markus Broecker:
Virtualizing living and working spaces: Proof of concept for a biomedical space-replication methodology. 53-61 - Patrick Aboagye-Sarfo, Qun Mai, Frank M. Sanfilippo, David B. Preen, Louise M. Stewart, Daniel M. Fatovich:
A comparison of multivariate and univariate time series approaches to modelling and forecasting emergency department demand in Western Australia. 62-73 - Anja Bethge, Udo Schumacher, Gero Wedemann:
Simulation of metastatic progression using a computer model including chemotherapy and radiation therapy. 74-87 - Vojtech Huser, Chandan Sastry, Matthew Breymaier, Asma Idriss, James J. Cimino:
Standardizing data exchange for clinical research protocols and case report forms: An assessment of the suitability of the Clinical Data Interchange Standards Consortium (CDISC) Operational Data Model (ODM). 88-99 - Libera Fresiello, Gianfranco Ferrari, Arianna Di Molfetta, Krzysztof Zielinski, Alexandros T. Tzallas, Steven Jacobs, Marek Darowski, Maciej Kozarski, Bart Meyns, Nikolaos S. Katertsidis, E. C. Karvounis, Markos G. Tsipouras, Maria Giovanna Trivella:
A cardiovascular simulator tailored for training and clinical uses. 100-112 - Aqueasha M. Martin, Tamirat Abegaz, Juan E. Gilbert:
Designing an over-the-counter consumer decision-making tool for older adults. 113-123 - Qi Li, Eric S. Kirkendall, Eric S. Hall, Yizhao Ni, Todd Lingren, Megan Kaiser, Nataline Lingren, Haijun Zhai, Imre Solti, Kristin Melton:
Automated detection of medication administration errors in neonatal intensive care. 124-133 - Wu Zheng, Catherine Blake:
Using distant supervised learning to identify protein subcellular localizations from full-text scientific articles. 134-144 - Khaled El Emam, Hanna Farah, Saeed Samet, Aleksander Essex, Elizabeth Jonker, Murat Kantarcioglu, Craig Earle:
A privacy preserving protocol for tracking participants in phase I clinical trials. 145-162
- Beatriz Pontes, Raúl Giráldez, Jesús S. Aguilar-Ruiz:
Biclustering on expression data: A review. 163-180
- Fatemeh Kargarfard, Ashkan Sami, Esmaeil Ebrahimie:
Knowledge discovery and sequence-based prediction of pandemic influenza using an integrated classification and association rule mining (CBA) algorithm. 181-188 - Hai Huang, Shaohong Zhang, Wen-Jun Shen, Hau-San Wong, Dongqing Xie:
Gene set enrichment ensemble using fold change data only. 189-203 - Leyla Jael García Castro, Rafael Berlanga Llavori, Alexander García Castro:
In the pursuit of a semantic similarity metric based on UMLS annotations for articles in PubMed Central Open Access. 204-218 - Benjamin Alan Goldstein, Tara I. Chang, Wolfgang C. Winkelmayer:
Classifying individuals based on a densely captured sequence of vital signs: An example using repeated blood pressure measurements during hemodialysis treatment. 219-224 - Lukasz Czekierda, Filip Malawski, Przemyslaw Wyszkowski:
Holistic approach to design and implementation of a medical teleconsultation workspace. 225-244 - Kamran Munir, Khawar Hasham, Richard McClatchey:
Development of a large-scale neuroimages and clinical variables data atlas in the neuGRID4You (N4U) project. 245-262
- Elizabeth V. Eikey, Madhu C. Reddy, Craig E. Kuziemsky:
Examining the role of collaboration in studies of health information technologies in biomedical informatics: A systematic review of 25 years of research. 263-277
- Duo Helen Wei, Huanying Helen Gu, Yehoshua Perl, Michael Halper, Christopher Ochs, Gai Elhanan, Yan Chen:
Structural measures to track the evolution of SNOMED CT hierarchies. 278-287 - Timothy Jay Carney, Geoffrey P. Morgan, Josette Jones, Anna M. McDaniel, Michael T. Weaver, Bryan J. Weiner, David A. Haggstrom:
Hypothesis generation using network structures on community health center cancer-screening performance. 288-307 - Saurav Mallik, Ujjwal Maulik:
MiRNA-TF-gene network analysis through ranking of biomolecules for multi-informative uterine leiomyoma dataset. 308-319 - Min Song, Won Chul Kim, Dahee Lee, Go Eun Heo, Keun Young Kang:
PKDE4J: Entity and relation extraction for public knowledge discovery. 320-332 - Aron Henriksson, Maria Kvist, Hercules Dalianis, Martin Duneld:
Identifying adverse drug event information in clinical notes with distributional semantic representations of context. 333-349 - W. Scott Campbell, Jay Pedersen, James C. McClay, Praveen Rao, Dhundy Bastola, James R. Campbell:
An alternative database approach for management of SNOMED CT and improved patient data queries. 350-357 - Chao Li, Cen Shi, Huan Zhang, Yazhu Chen, Su Zhang:
Multiple instance learning for computer aided detection and diagnosis of gastric cancer with dual-energy CT imaging. 358-368 - Simone Marini, Emanuele Trifoglio, Nicola Barbarini, Francesco Sambo, Barbara Di Camillo, Alberto Malovini, Marco Manfrini, Claudio Cobelli, Riccardo Bellazzi:
A Dynamic Bayesian Network model for long-term simulation of clinical complications in type 1 diabetes. 369-376 - Keith Feldman, Darcy A. Davis, Nitesh V. Chawla:
Scaling and contextualizing personalized healthcare: A case study of disease prediction algorithm integration. 377-385 - Mustafa Ozkaynak, Oliwier Dziadkowiec, Rakesh Mistry, Tiffany Callahan, Ze He, Sara J. Deakyne Davies, Eric Tham:
Characterizing workflow for pediatric asthma patients in emergency departments using electronic health records. 386-398 - Wenya Yu, Meina Li, Yang Ge, Ling Li, Yi Zhang, Yuan Liu, Lulu Zhang:
Transformation of potential medical demand in China: A system dynamics simulation model. 399-414 - Alicia Martinez-García, J. A. García-García, María José Escalona Cuaresma, Carlos Luis Parra Calderón:
Working with the HL7 metamodel in a Model Driven Engineering context. 415-424 - Rainer Winnenburg, Alfred Sorbello, Anna Ripple, Rave Harpaz, Joseph M. Tonning, Ana Szarfman, Henry Francis, Olivier Bodenreider:
Leveraging MEDLINE indexing for pharmacovigilance - Inherent limitations and mitigation strategies. 425-435 - Duy Duc An Bui, Siddhartha Jonnalagadda, Guilherme Del Fiol:
Automatically finding relevant citations for clinical guideline development. 436-445 - Hong Zhou, Howard S. Burkom, Carla A. Winston, Achintya Dey, Umed Ajani:
Practical comparison of aberration detection algorithms for biosurveillance systems. 446-455 - Leslie D. McIntosh, Mukesh K. Sharma, David Mulvihill, Snehil Gupta, Anthony Juehne, Bijoy George, Suhas Khot, Atul Kaushal, Mark A. Watson, Rakesh Nagarajan:
caTissue Suite to OpenSpecimen: Developing an extensible, open source, web-based biobanking management system. 456-464
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