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Publication search results
found 357 matches
- 2018
- Wajid Arshad Abbasi, Amina Asif, Asa Ben-Hur, Fayyaz ul Amir Afsar Minhas:
Learning protein binding affinity using privileged information. BMC Bioinform. 19(1): 425:1-425:12 (2018) - Armen Abnousi, Shira L. Broschat, Ananth Kalyanaraman:
Alignment-free clustering of large data sets of unannotated protein conserved regions using minhashing. BMC Bioinform. 19(1): 83:1-83:18 (2018) - Badri Adhikari, Jianlin Cheng:
CONFOLD2: improved contact-driven ab initio protein structure modeling. BMC Bioinform. 19(1): 22:1-22:5 (2018) - Asan Agibetov, Kathrin Blagec, Hong Xu, Matthias Samwald:
Fast and scalable neural embedding models for biomedical sentence classification. BMC Bioinform. 19(1): 541:1-541:9 (2018) - Sinan Abo Alchamlat, Frédéric Farnir:
Aggregation of experts: an application in the field of "interactomics" (detection of interactions on the basis of genomic data). BMC Bioinform. 19(1): 445:1-445:15 (2018) - Mazen Alobaidi, Khalid Mahmood Malik, Susan Sabra:
Linked open data-based framework for automatic biomedical ontology generation. BMC Bioinform. 19(1): 319:1-319:13 (2018) - Maria Luisa Amaral, Galina A. Erikson, Maxim N. Shokhirev:
BART: bioinformatics array research tool. BMC Bioinform. 19(1): 296:1-296:6 (2018) - Christopher S. Anderson, Patrick R. McCall, Harry A. Stern, Hongmei Yang, David J. Topham:
Antigenic cartography of H1N1 influenza viruses using sequence-based antigenic distance calculation. BMC Bioinform. 19(1): 51:1-51:11 (2018) - Krittima Anekthanakul, Apiradee Hongsthong, Jittisak Senachak, Marasri Ruengjitchatchawalya:
SpirPep: an in silico digestion-based platform to assist bioactive peptides discovery from a genome-wide database. BMC Bioinform. 19(1): 149:1-149:10 (2018) - Maciej Antczak, Tomasz Zok, Maciej Osowiecki, Mariusz Popenda, Ryszard W. Adamiak, Marta Szachniuk:
RNAfitme: a webserver for modeling nucleobase and nucleoside residue conformation in fixed-backbone RNA structures. BMC Bioinform. 19(1): 304:1-304:11 (2018) - Raúl Arias-Carrasco, Yessenia Vásquez-Morán, Helder I. Nakaya, Vinicius Maracaja-Coutinho:
StructRNAfinder: an automated pipeline and web server for RNA families prediction. BMC Bioinform. 19(1): 55:1-55:7 (2018) - Kristiina Ausmees, Aji John, Salman Zubair Toor, Andreas Hellander, Carl Nettelblad:
BAMSI: a multi-cloud service for scalable distributed filtering of massive genome data. BMC Bioinform. 19(1): 240:1-240:11 (2018) - Artem Babaian, Anicet Ebou, Alyssa Fegen, Ho Yin Kam, German E. Novakovsky, Jasper Wong, Dylan Aïssi, Li Yao:
bioSyntax: syntax highlighting for computational biology. BMC Bioinform. 19(1): 303:1-303:6 (2018) - Alyssa Baccarella, Claire R. Williams, Jay Z. Parrish, Charles C. Kim:
Empirical assessment of the impact of sample number and read depth on RNA-Seq analysis workflow performance. BMC Bioinform. 19(1): 423:1-423:12 (2018) - Costa Bachas, Jasmina Hodzic, Johannes C. van der Mijn, Chantal Stoepker, Henk M. W. Verheul, Rob M. F. Wolthuis, Emanuela Felley-Bosco, Wessel N. van Wieringen, Victor W. van Beusechem, Ruud H. Brakenhoff, Renée X. de Menezes:
Rscreenorm: normalization of CRISPR and siRNA screen data for more reproducible hit selection. BMC Bioinform. 19(1): 301:1-301:12 (2018) - John A. Bachman, Benjamin M. Gyori, Peter K. Sorger:
FamPlex: a resource for entity recognition and relationship resolution of human protein families and complexes in biomedical text mining. BMC Bioinform. 19(1): 248:1-248:14 (2018) - Varsha D. Badal, Petras J. Kundrotas, Ilya A. Vakser:
Natural language processing in text mining for structural modeling of protein complexes. BMC Bioinform. 19(1): 84:1-84:10 (2018) - Saurabh Baheti, Xiaojia Tang, Daniel R. O'Brien, Nicholas Chia, Lewis R. Roberts, Heidi Nelson, Judy C. Boughey, Liewei Wang, Matthew P. Goetz, Jean-Pierre A. Kocher, Krishna R. Kalari:
HGT-ID: an efficient and sensitive workflow to detect human-viral insertion sites using next-generation sequencing data. BMC Bioinform. 19(1): 271:1-271:11 (2018) - Shakuntala Baichoo, Yassine Souilmi, Sumir Panji, Gerrit Botha, Ayton Meintjes, Scott Hazelhurst, Hocine Bendou, Eugene de Beste, Phelelani T. Mpangase, Oussema Souiai, Mustafa Alghali, Long Yi, Brian D. O'Connor, Michael R. Crusoe, Don Armstrong, Shaun Aron, Fourie Joubert, Azza E. Ahmed, Mamana Mbiyavanga, Peter van Heusden, Lerato E. Magosi, Jennie Zermeno, Liudmila S. Mainzer, Faisal M. Fadlelmola, C. Victor Jongeneel, Nicola J. Mulder:
Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics. BMC Bioinform. 19(1): 457:1-457:13 (2018) - Caroline Bazzoli, Sophie Lambert-Lacroix:
Classification based on extensions of LS-PLS using logistic regression: application to clinical and multiple genomic data. BMC Bioinform. 19(1): 314:1-314:13 (2018) - Stefano Beretta, Murray Patterson, Simone Zaccaria, Gianluca Della Vedova, Paola Bonizzoni:
HapCHAT: adaptive haplotype assembly for efficiently leveraging high coverage in long reads. BMC Bioinform. 19(1): 252:1-252:19 (2018) - Johanna Bertl, Qianyun Guo, Malene Juul, Søren Besenbacher, Morten Muhlig Nielsen, Henrik Hornshøj, Jakob Skou Pedersen, Asger Hobolth:
A site specific model and analysis of the neutral somatic mutation rate in whole-genome cancer data. BMC Bioinform. 19(1): 147:1-147:15 (2018) - Herman De Beukelaer, Guy F. Davenport, Veerle Fack:
Core Hunter 3: flexible core subset selection. BMC Bioinform. 19(1): 203:1-203:12 (2018) - Xiaopeng Bian, Bin Zhu, Mingyi Wang, Ying Hu, Qingrong Chen, Cu Nguyen, Belynda Hicks, Daoud M. Meerzaman:
Comparing the performance of selected variant callers using synthetic data and genome segmentation. BMC Bioinform. 19(1): 429:1-429:11 (2018) - Carl G. de Boer, Aviv Regev:
BROCKMAN: deciphering variance in epigenomic regulators by k-mer factorization. BMC Bioinform. 19(1): 253:1-253:13 (2018) - Paolo Boldi, Marco Frasca, Dario Malchiodi:
Correction to: Evaluating the impact of topological protein features on the negative examples selection. BMC Bioinform. 19(1): 530:1 (2018) - Vincenzo Bonnici, Federico Busato, Stefano Aldegheri, Murodzhon Akhmedov, Luciano Cascione, Alberto Arribas Carmena, Francesco Bertoni, Nicola Bombieri, Ivo Kwee, Rosalba Giugno:
Correction to: cuRnet: an R package for graph traversing on GPU. BMC Bioinform. 19(1): 456:1 (2018) - Charlotte Bonte, Eleftheria Makri, Amin Ardeshirdavani, Jaak Simm, Yves Moreau, Frederik Vercauteren:
Towards practical privacy-preserving genome-wide association study. BMC Bioinform. 19(1): 537:1-537:12 (2018) - Kyle Boone, Kyle V. Camarda, Paulette Spencer, Candan Tamerler:
Antimicrobial peptide similarity and classification through rough set theory using physicochemical boundaries. BMC Bioinform. 19(1): 469:1-469:10 (2018) - Regina Brinster, Anna Köttgen, Bamidele O. Tayo, Martin Schumacher, Peggy Sekula:
Control procedures and estimators of the false discovery rate and their application in low-dimensional settings: an empirical investigation. BMC Bioinform. 19(1): 78:1-78:10 (2018)
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