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@article{DBLP:journals/jib/AndrecutK06,
  author       = {Mircea Andrecut and
                  Stuart A. Kauffman},
  title        = {Noise in Genetic Toggle Switch Models},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {1},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-23},
  doi          = {10.2390/BIECOLL-JIB-2006-23},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/AndrecutK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/ApilettiBFB06,
  author       = {Daniele Apiletti and
                  Giulia Bruno and
                  Elisa Ficarra and
                  Elena Baralis},
  title        = {Data Cleaning and Semantic Improvement in Biological Databases},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-40},
  doi          = {10.2390/BIECOLL-JIB-2006-40},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/ApilettiBFB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/BaumbachBWTR06,
  author       = {Jan Baumbach and
                  Karina Brinkrolf and
                  Tobias Wittkop and
                  Andreas Tauch and
                  Sven Rahmann},
  title        = {CoryneRegNet 2: An Integrative Bioinformatics Approach for Reconstruction
                  and Comparison of Transcriptional Regulatory Networks in Prokaryotes},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-24},
  doi          = {10.2390/BIECOLL-JIB-2006-24},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/BaumbachBWTR06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/BrowneWZA06,
  author       = {Fiona Browne and
                  Haiying Wang and
                  Huiru Zheng and
                  Francisco Azuaje},
  title        = {An assessment of machine and statistical learning approaches to inferring
                  networks of protein-protein interactions},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-41},
  doi          = {10.2390/BIECOLL-JIB-2006-41},
  timestamp    = {Wed, 04 Nov 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jib/BrowneWZA06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/Capobianco06,
  author       = {Enrico Capobianco},
  title        = {Statistical Embedding in Complex Biosystems},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-30},
  doi          = {10.2390/BIECOLL-JIB-2006-30},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/Capobianco06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/CasbonS06,
  author       = {James A. Casbon and
                  Mansoor A. S. Saqi},
  title        = {Functional diversity within protein superfamilies},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-46},
  doi          = {10.2390/BIECOLL-JIB-2006-46},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/CasbonS06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/EloLA06,
  author       = {Laura Elo and
                  Riitta Lahesmaa and
                  Tero Aittokallio},
  title        = {Inference of Gene Coexpression Networks by Integrative Analysis across
                  Microarray Experiments},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-33},
  doi          = {10.2390/BIECOLL-JIB-2006-33},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/EloLA06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/FaithB06,
  author       = {Joe Faith and
                  Michael J. Brockway},
  title        = {Targeted Projection Pursuit Tool for Gene Expression Visualisation},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-43},
  doi          = {10.2390/BIECOLL-JIB-2006-43},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/FaithB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/GillespieWSPBK06,
  author       = {Colin S. Gillespie and
                  Darren J. Wilkinson and
                  Daryl P. Shanley and
                  Carole J. Proctor and
                  Richard J. Boys and
                  Thomas B. L. Kirkwood},
  title        = {{BASIS:} an internet resource for network modelling},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-26},
  doi          = {10.2390/BIECOLL-JIB-2006-26},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/GillespieWSPBK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/GuerinMCTGLBM06,
  author       = {Emilie Gu{\'{e}}rin and
                  Gwena{\"{e}}lle Marquet and
                  Julie Chabalier and
                  Marie{-}B{\'{e}}reng{\`{e}}re Troadec and
                  Christiane Guguen{-}Guillouzo and
                  Olivier Lor{\'{e}}al and
                  Anita Burgun and
                  Fouzia Moussouni},
  title        = {Combining biomedical knowledge and transcriptomic data to extract
                  new knowledge on genes},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-35},
  doi          = {10.2390/BIECOLL-JIB-2006-35},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/GuerinMCTGLBM06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/HodgmanUTD06,
  author       = {T. Charles Hodgman and
                  Y. Ugartechea{-}Chirino and
                  G. Tansley and
                  I. Dryden},
  title        = {The implications for Bioinformatics of integration across physical
                  scales},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-39},
  doi          = {10.2390/BIECOLL-JIB-2006-39},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/HodgmanUTD06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/HussN06,
  author       = {Mikael Huss and
                  Karin Nordstr{\"{o}}m},
  title        = {Prediction of transcription factor binding to {DNA} using rule induction
                  methods},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-42},
  doi          = {10.2390/BIECOLL-JIB-2006-42},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/HussN06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/JunkerKS06,
  author       = {Bj{\"{o}}rn H. Junker and
                  Dirk Kosch{\"{u}}tzki and
                  Falk Schreiber},
  title        = {Kinetic Modelling with the Systems Biology Modelling Environment SyBME},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {1},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-18},
  doi          = {10.2390/BIECOLL-JIB-2006-18},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/JunkerKS06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/KapsDHJKWH06,
  author       = {Andreas Kaps and
                  Konstantin Dyshlevoi and
                  Klaus Heumann and
                  Ralf Jost and
                  Ioannis Kontodinas and
                  Martin Wolff and
                  Jean Hani},
  title        = {The BioRS(TM) Integration and Retrieval System: An open system for
                  distributed data integration},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-44},
  doi          = {10.2390/BIECOLL-JIB-2006-44},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/KapsDHJKWH06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/KhalidFKWLL06,
  author       = {Sabah Khalid and
                  Karl Fraser and
                  Mohsin Khan and
                  Ping Wang and
                  Xiaohui Liu and
                  Suling Li},
  title        = {Analysing Microarray Data using the Multi-functional Immune Ontologiser},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-25},
  doi          = {10.2390/BIECOLL-JIB-2006-25},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/KhalidFKWLL06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/KuntzerBGBHKKL06,
  author       = {Jan K{\"{u}}ntzer and
                  Torsten Blum and
                  Andreas Gerasch and
                  Christina Backes and
                  Andreas Hildebrandt and
                  Michael Kaufmann and
                  Oliver Kohlbacher and
                  Hans{-}Peter Lenhof},
  title        = {{BN++} - {A} Biological Information System},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-34},
  doi          = {10.2390/BIECOLL-JIB-2006-34},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/KuntzerBGBHKKL06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/MartinezPPCL06,
  author       = {Ricardo Mart{\'{\i}}nez and
                  Nicolas Pasquier and
                  Claude Pasquier and
                  Martine Collard and
                  Lucero Lopez{-}Perez},
  title        = {Co-expressed gene group analysis {(CGGA):} An automatic tool for the
                  interpretation of microarray experiments},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-37},
  doi          = {10.2390/BIECOLL-JIB-2006-37},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/MartinezPPCL06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/MoodieSGG06,
  author       = {Stuart L. Moodie and
                  Anatoly A. Sorokin and
                  Igor Goryanin and
                  Peter Ghazal},
  title        = {A Graphical Notation to describe the Logical Interactions of Biological
                  Pathways},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-36},
  doi          = {10.2390/BIECOLL-JIB-2006-36},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/MoodieSGG06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/PittelkowW06,
  author       = {Yvonne E. Pittelkow and
                  Susan R. Wilson},
  title        = {Modeling Microarray Data: Interpreting and communicating the biological
                  results},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-29},
  doi          = {10.2390/BIECOLL-JIB-2006-29},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/PittelkowW06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/Pospisil06,
  author       = {Heike Pospisil},
  title        = {Identification of embryo specific human isoforms using a database
                  of predicted alternative splice forms},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {1},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-17},
  doi          = {10.2390/BIECOLL-JIB-2006-17},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/Pospisil06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/PrinsH06,
  author       = {B. Prins and
                  Ralf Hofest{\"{a}}dt},
  title        = {{MILAN} - {A} medical information-system linking agents to metabolic
                  networks},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-45},
  doi          = {10.2390/BIECOLL-JIB-2006-45},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/PrinsH06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/PurutcuogluW06,
  author       = {Vilda Purut{\c{c}}uoglu and
                  Ernst Wit},
  title        = {Exact and Approximate Stochastic Simulations of the {MAPK} Pathway
                  and Comparisons of Simulations Results},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-38},
  doi          = {10.2390/BIECOLL-JIB-2006-38},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/PurutcuogluW06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/RanganathSV06,
  author       = {Aruna Ranganath and
                  K. C. Shet and
                  Nagardone Vidyavathi},
  title        = {3D image and graph based Computation of Protein Surface},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {1},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-22},
  doi          = {10.2390/BIECOLL-JIB-2006-22},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/RanganathSV06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/ReddyPM06,
  author       = {Ashok Reddy Dinasarapu and
                  B. V. L. S. Prasad and
                  Chanchal K. Mitra},
  title        = {Functional classification of transcription factor binding sites: information
                  content as a metric},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {1},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-20},
  doi          = {10.2390/BIECOLL-JIB-2006-20},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/ReddyPM06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/RomanoBPFMMMPSM06,
  author       = {Paolo Romano and
                  Guglielmo Bertolini and
                  Flavio De Paoli and
                  M. Fattore and
                  Domenico Marra and
                  Giancarlo Mauri and
                  Emanuela Merelli and
                  Ivan Porro and
                  Silvia Scaglione and
                  Luciano Milanesi},
  title        = {Network integration of data and analysis of oncology interest},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {1},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-21},
  doi          = {10.2390/BIECOLL-JIB-2006-21},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/RomanoBPFMMMPSM06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/RotherDMTGLP06,
  author       = {Kristian Rother and
                  Mathias Dunkel and
                  Elke Michalsky and
                  Silke Tri{\ss}l and
                  Andrean Goede and
                  Ulf Leser and
                  Robert Preissner},
  title        = {A structural keystone for drug design},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {1},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-19},
  doi          = {10.2390/BIECOLL-JIB-2006-19},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/RotherDMTGLP06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/SelpiBKC06,
  author       = {Selpi and
                  Christopher H. Bryant and
                  Graham J. L. Kemp and
                  Marija Cvijovic},
  title        = {A First Step towards Learning which uORFs Regulate Gene Expression},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-31},
  doi          = {10.2390/BIECOLL-JIB-2006-31},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/SelpiBKC06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/SteinfathRHSFS06,
  author       = {Matthias Steinfath and
                  Dirk Repsilber and
                  Manuela Hische and
                  Nicolas Schauer and
                  Alisdair R. Fernie and
                  Joachim Selbig},
  title        = {Metabolite profiles as a reflection of physiological status -- a methodological
                  validation},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-28},
  doi          = {10.2390/BIECOLL-JIB-2006-28},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/SteinfathRHSFS06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/StrasserSOB06,
  author       = {Wolfgang Stra{\ss}er and
                  Doris Siegl and
                  Kamil {\"{O}}nder and
                  Johann W. Bauer},
  title        = {InSilico Proteomics System: Integration and Application of Protein
                  and Protein-Protein Interaction Data using Microsoft .NET},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-27},
  doi          = {10.2390/BIECOLL-JIB-2006-27},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/StrasserSOB06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jib/StumpfT06,
  author       = {Michael P. H. Stumpf and
                  Thomas Thorne},
  title        = {Multi-model inference of network properties from incomplete data},
  journal      = {J. Integr. Bioinform.},
  volume       = {3},
  number       = {2},
  year         = {2006},
  url          = {https://doi.org/10.2390/biecoll-jib-2006-32},
  doi          = {10.2390/BIECOLL-JIB-2006-32},
  timestamp    = {Tue, 14 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jib/StumpfT06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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