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@article{DBLP:journals/bmcbi/0002VKE12,
author = {Wen{-}Chieh Chang and
Sudheer Vakati and
Roland Krause and
Oliver Eulenstein},
title = {Exploring biological interaction networks with tailored weighted quasi-bicliques},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S16},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S16},
doi = {10.1186/1471-2105-13-S10-S16},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/0002VKE12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/0007WSMPMWC12,
author = {Hui Huang and
Xiaogang Wu and
Madhankumar Sonachalam and
Sammed N. Mandape and
Ragini Pandey and
Karl F. MacDorman and
Ping Wan and
Jake Y. Chen},
title = {{PAGED:} a pathway and gene-set enrichment database to enable molecular
phenotype discoveries},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-15}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S15-S2},
doi = {10.1186/1471-2105-13-S15-S2},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/0007WSMPMWC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AbbasAB12,
author = {Mostafa M. Abbas and
Mohamed Abouelhoda and
Hazem M. Bahig},
title = {A hybrid method for the exact planted (l, d) motif finding problem
and its parallelization},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S10},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S10},
doi = {10.1186/1471-2105-13-S17-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AbbasAB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AbdeltawabLWK12,
author = {Nourtan Abdeltawab and
Lu Lu and
Robert W. Williams and
Malak Kotb},
title = {Meta-analysis of genes within QTLs of group {A} streptococcal sepsis
and their expression QTLs reveal pathways modulating host differential
response to streptococcal sepsis},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A6},
doi = {10.1186/1471-2105-13-S12-A6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AbdeltawabLWK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AganezovA12,
author = {Sergey Aganezov Jr. and
Max A. Alekseyev},
title = {On pairwise distances and median score of three genomes under {DCJ}},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S1},
doi = {10.1186/1471-2105-13-S19-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AganezovA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Alexandrov12,
author = {Theodore Alexandrov},
title = {{MALDI} imaging mass spectrometry: statistical data analysis and current
computational challenges},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-16}},
pages = {S11},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S16-S11},
doi = {10.1186/1471-2105-13-S16-S11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Alexandrov12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AnLOSM12,
author = {Li An and
Haibin Ling and
Zoran Obradovic and
Desmond J. Smith and
Vasileios Megalooikonomou},
title = {Learning pair-wise gene functional similarity by multiplex gene expression
maps},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-3}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S3-S1},
doi = {10.1186/1471-2105-13-S3-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AnLOSM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AndreiCZLMPZ12,
author = {Raluca Mihaela Andrei and
Marco Callieri and
Maria Francesca Zini and
Tiziana Loni and
Giuseppe Maraziti and
Mike Chen Pan and
Monica Zopp{\`{e}}},
title = {Intuitive representation of surface properties of biomolecules using
BioBlender},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S16},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S16},
doi = {10.1186/1471-2105-13-S4-S16},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AndreiCZLMPZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AyDK12,
author = {Ferhat Ay and
Michael Dang and
Tamer Kahveci},
title = {Metabolic network alignment in large scale by network compression},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-3}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S3-S2},
doi = {10.1186/1471-2105-13-S3-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AyDK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AyadiEH12,
author = {Wassim Ayadi and
Mourad Elloumi and
Jin{-}Kao Hao},
title = {Pattern-driven neighborhood search for biclustering of microarray
data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-7}},
pages = {S11},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S7-S11},
doi = {10.1186/1471-2105-13-S7-S11},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/AyadiEH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AzadPP12,
author = {Ariful Azad and
Saumyadipta Pyne and
Alex Pothen},
title = {Matching phosphorylation response patterns of antigen-receptor-stimulated
{T} cells via flow cytometry},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-2}},
pages = {S10},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S2-S10},
doi = {10.1186/1471-2105-13-S2-S10},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/AzadPP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BabbageNLF12,
author = {Jonathan Babbage and
Naga Nagisetty and
Steven P. Larmore and
Jacqueline Fiore},
title = {Delivering informatics for clinical research in developing countries},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A24},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A24},
doi = {10.1186/1471-2105-13-S12-A24},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BabbageNLF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BartlettCHPLJBVHNSAR12,
author = {Christopher W. Bartlett and
Soo Yeon Cheong and
Liping Hou and
Jesse Paquette and
Pek Yee Lum and
G{\"{u}}nter J{\"{a}}ger and
Florian Battke and
Corinna Vehlow and
Julian Heinrich and
Kay Nieselt and
Ryo Sakai and
Jan Aerts and
William C. Ray},
title = {An eQTL biological data visualization challenge and approaches from
the visualization community},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-8}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S8-S8},
doi = {10.1186/1471-2105-13-S8-S8},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BartlettCHPLJBVHNSAR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BeckY12,
author = {Marc Beck and
Roman V. Yampolskiy},
title = {{DNA} as a medium for hiding data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A23},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A23},
doi = {10.1186/1471-2105-13-S12-A23},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BeckY12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BellazziMMSR12,
author = {Riccardo Bellazzi and
Marco Masseroli and
Shawn N. Murphy and
Amnon Shabo and
Paolo Romano},
title = {Clinical Bioinformatics: challenges and opportunities},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-14}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S14-S1},
doi = {10.1186/1471-2105-13-S14-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BellazziMMSR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BeltranTF12,
author = {Alejandra N. Gonz{\'{a}}lez{-}Beltr{\'{a}}n and
Ben Tagger and
Anthony Finkelstein},
title = {Federated ontology-based queries over cancer data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-1}},
pages = {S9},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S1-S9},
doi = {10.1186/1471-2105-13-S1-S9},
timestamp = {Thu, 30 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BeltranTF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BemisEFCV12,
author = {Kyle D. Bemis and
Livia Eberlin and
Christina Ferreira and
R. Cooks and
Olga Vitek},
title = {Spatial segmentation and feature selection for desi imaging mass spectrometry
data with spatially-aware sparse clustering},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-18}},
pages = {A8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S18-A8},
doi = {10.1186/1471-2105-13-S18-A8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BemisEFCV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BessarabovaIJNN12,
author = {Marina Bessarabova and
Alexander Ishkin and
Lellean JeBailey and
Tatiana Nikolskaya and
Yuri Nikolsky},
title = {Knowledge-based analysis of proteomics data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-16}},
pages = {S13},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S16-S13},
doi = {10.1186/1471-2105-13-S16-S13},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BessarabovaIJNN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BevilacquaPACPT12,
author = {Vitoantonio Bevilacqua and
Paolo Pannarale and
Mirko Abbrescia and
Claudia Cava and
Angelo Paradiso and
Stefania Tommasi},
title = {Comparison of data-merging methods with {SVM} attribute selection
and classification in breast cancer gene expression},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-7}},
pages = {S9},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S7-S9},
doi = {10.1186/1471-2105-13-S7-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BevilacquaPACPT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BiancaCPP12,
author = {Carlo Bianca and
Ferdinando Chiacchio and
Francesco Pappalardo and
Marzio Pennisi},
title = {Mathematical modeling of the immune system recognition to mammary
carcinoma antigen},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S21},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S21},
doi = {10.1186/1471-2105-13-S17-S21},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BiancaCPP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BianchiGHA12,
author = {Valerio Bianchi and
Pier Federico Gherardini and
Manuela Helmer{-}Citterich and
Gabriele Ausiello},
title = {Identification of binding pockets in protein structures using a knowledge-based
potential derived from local structural similarities},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S17},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S17},
doi = {10.1186/1471-2105-13-S4-S17},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BianchiGHA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BisginLKFXT12,
author = {Halil Bisgin and
Zhichao Liu and
Reagan Kelly and
Hong Fang and
Xiaowei Xu and
Weida Tong},
title = {Investigating drug repositioning opportunities in {FDA} drug labels
through topic modeling},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-15}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S15-S6},
doi = {10.1186/1471-2105-13-S15-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BisginLKFXT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BiswalDKT12,
author = {Devendra Kumar Biswal and
Manish Debnath and
Shakti Kumar and
Pramod Tandon},
title = {Phylogenetic reconstruction in the Order Nymphaeales: {ITS2} secondary
structure analysis and in silico testing of maturase k (matK) as a
potential marker for {DNA} bar coding},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S26},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S26},
doi = {10.1186/1471-2105-13-S17-S26},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BiswalDKT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BjorneGS12,
author = {Jari Bj{\"{o}}rne and
Filip Ginter and
Tapio Salakoski},
title = {University of Turku in the BioNLP'11 Shared Task},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-11}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S11-S4},
doi = {10.1186/1471-2105-13-S11-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BjorneGS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Blanchette12,
author = {Mathieu Blanchette},
title = {Exploiting ancestral mammalian genomes for the prediction of human
transcription factor binding sites},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S2},
doi = {10.1186/1471-2105-13-S19-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Blanchette12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BonfertCZF12,
author = {Thomas Bonfert and
Gergely Csaba and
Ralf Zimmer and
Caroline C. Friedel},
title = {A context-based approach to identify the most likely mapping for RNA-seq
experiments},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-6}},
pages = {S9},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S6-S9},
doi = {10.1186/1471-2105-13-S6-S9},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BonfertCZF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BossyJMVAGBN12,
author = {Robert Bossy and
Julien Jourde and
Alain{-}Pierre Manine and
Philippe Veber and
{\'{E}}rick Alphonse and
Maarten van de Guchte and
Philippe Bessi{\`{e}}res and
Claire Nedellec},
title = {BioNLP Shared Task - The Bacteria Track},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-11}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S11-S3},
doi = {10.1186/1471-2105-13-S11-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BossyJMVAGBN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BramucciPBP12,
author = {Emanuele Bramucci and
Alessandro Paiardini and
Francesco Bossa and
Stefano Pascarella},
title = {PyMod: sequence similarity searches, multiple sequence-structure alignments,
and homology modeling within PyMOL},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S2},
doi = {10.1186/1471-2105-13-S4-S2},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BramucciPBP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BriacheMKDHLM12,
author = {Abdelaali Briache and
Kamar Marrakchi and
Amine Kerzazi and
Ismael Navas{-}Delgado and
Badr Din Rossi Hassani and
Khalid Lairini and
Jos{\'{e}} Francisco Aldana Montes},
title = {Transparent mediation-based access to multiple yeast data sources
using an ontology driven interface},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-1}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S1-S7},
doi = {10.1186/1471-2105-13-S1-S7},
timestamp = {Wed, 15 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BriacheMKDHLM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BroomDS12,
author = {Bradley M. Broom and
Kim{-}Anh Do and
Devika Subramanian},
title = {Model averaging strategies for structure learning in Bayesian networks
with limited data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-13}},
pages = {S10},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S13-S10},
doi = {10.1186/1471-2105-13-S13-S10},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/BroomDS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BurgerP0MS12,
author = {Albert Burger and
Adrian Paschke and
Paolo Romano and
M. Scott Marshall and
Andrea Splendiani},
title = {Semantic Web Applications and Tools for the Life Sciences: {SWAT4LS}
2010},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-1}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S1-S1},
doi = {10.1186/1471-2105-13-S1-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BurgerP0MS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/BurtonK12,
author = {Christopher Burton and
Sujin Kim},
title = {The development of a three-frame timeline for clinical concepts extracted
from discharge summaries},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A14},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A14},
doi = {10.1186/1471-2105-13-S12-A14},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/BurtonK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CaballeroBYC12,
author = {Ignacio S. Caballero and
Gracia Bonilla and
Judy Y. Yen and
John H. Connor},
title = {Diagnosing Lassa virus infection by tracking the antiviral response},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-18}},
pages = {A13},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S18-A13},
doi = {10.1186/1471-2105-13-S18-A13},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/CaballeroBYC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CaiLLHLMJL12,
author = {Guoshuai Cai and
Hua Li and
Yue Lu and
Xuelin Huang and
Juhee Lee and
Peter M{\"{u}}ller and
Yuan Ji and
Shoudan Liang},
title = {Accuracy of RNA-Seq and its dependence on sequencing depth},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-13}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S13-S5},
doi = {10.1186/1471-2105-13-S13-S5},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/CaiLLHLMJL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CalabreseSA12,
author = {Francesco Maria Calabrese and
Domenico Simone and
Marcella Attimonelli},
title = {Primates and mouse NumtS in the {UCSC} Genome Browser},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S15},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S15},
doi = {10.1186/1471-2105-13-S4-S15},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/CalabreseSA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CaravagnaBd12,
author = {Giulio Caravagna and
Roberto Barbuti and
Alberto d'Onofrio},
title = {Fine-tuning anti-tumor immunotherapies via stochastic simulations},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S8},
doi = {10.1186/1471-2105-13-S4-S8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CaravagnaBd12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CatalanoPSF12,
author = {Domenico Catalano and
Domenico Pignone and
Gabriella Sonnante and
Mariella M. Finetti{-}Sialer},
title = {In-silico and in-vivo analyses of {EST} databases unveil conserved
miRNAs from Carthamus tinctorius and Cynara cardunculus},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S12},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S12},
doi = {10.1186/1471-2105-13-S4-S12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CatalanoPSF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChangTTN12,
author = {Jia{-}Ming Chang and
Paolo Di Tommaso and
Jean{-}Fran{\c{c}}ois Taly and
C{\'{e}}dric Notredame},
title = {Accurate multiple sequence alignment of transmembrane proteins with
PSI-Coffee},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S1},
doi = {10.1186/1471-2105-13-S4-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChangTTN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChaudharyBE12,
author = {Ruchi Chaudhary and
J. Gordon Burleigh and
Oliver Eulenstein},
title = {Efficient error correction algorithms for gene tree reconciliation
based on duplication, duplication and loss, and deep coalescence},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S11},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S11},
doi = {10.1186/1471-2105-13-S10-S11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChaudharyBE12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChenMSWZ12,
author = {Jianer Chen and
Ion I. Mandoiu and
Raj Sunderraman and
Jianxin Wang and
Alexander Zelikovsky},
title = {Guest Editors' Introduction},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S1},
doi = {10.1186/1471-2105-13-S10-S1},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ChenMSWZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChintaTW12,
author = {Rambabu Chinta and
Joo Huang Tan and
Martin Wasser},
title = {The study of muscle remodeling in Drosophila metamorphosis using in
vivo microscopy and bioimage informatics},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S14},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S14},
doi = {10.1186/1471-2105-13-S17-S14},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChintaTW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChristinatM12,
author = {Yann Christinat and
Bernard M. E. Moret},
title = {Inferring transcript phylogenies},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-9}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S9-S1},
doi = {10.1186/1471-2105-13-S9-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ChristinatM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CloteLL12,
author = {Peter Clote and
Feng Lou and
William Andrew Lorenz},
title = {Maximum expected accuracy structural neighbors of an {RNA} secondary
structure},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-5}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S5-S6},
doi = {10.1186/1471-2105-13-S5-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CloteLL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CloughTRAV12,
author = {Timothy Clough and
Safia Thaminy and
Susanne Ragg and
Ruedi Aebersold and
Olga Vitek},
title = {Statistical protein quantification and significance analysis in label-free
{LC-MS} experiments with complex designs},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-16}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S16-S6},
doi = {10.1186/1471-2105-13-S16-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CloughTRAV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ColvinL12,
author = {Robert A. Colvin and
Jundong Liu},
title = {Preface},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-2}},
pages = {I1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S2-I1},
doi = {10.1186/1471-2105-13-S2-I1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ColvinL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ConsiglioCCFGGILPPRL12,
author = {Arianna Consiglio and
Massimo Carella and
Giorgio De Caro and
Gianfranco Delle Foglie and
Candida Giovannelli and
Giorgio Grillo and
Massimo Ianigro and
Flavio Licciulli and
Orazio Palumbo and
Ada Piepoli and
Elena Ranieri and
Sabino Liuni},
title = {{BEAT:} Bioinformatics Exon Array Tool to store, analyze and visualize
Affymetrix GeneChip Human Exon Array data from disease experiments},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S21},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S21},
doi = {10.1186/1471-2105-13-S4-S21},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ConsiglioCCFGGILPPRL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CorneroAFVSEBBBV12,
author = {Andrea Cornero and
Massimo Acquaviva and
Paolo Fardin and
Rogier Versteeg and
Alexander Schramm and
Alessandra Eva and
Maria Bosco and
Fabiola Blengio and
Sara Barzaghi and
Luigi Varesio},
title = {Design of a multi-signature ensemble classifier predicting neuroblastoma
patients' outcome},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S13},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S13},
doi = {10.1186/1471-2105-13-S4-S13},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CorneroAFVSEBBBV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CoutantCLLPCLD12,
author = {Sophie Coutant and
Chlo{\'{e}} Cabot and
Arnaud Lefebvre and
Martine L{\'{e}}onard and
{\'{E}}lise Prieur{-}Gaston and
Dominique Campion and
Thierry Lecroq and
H{\'{e}}l{\`{e}}ne Dauchel},
title = {{EVA:} Exome Variation Analyzer, an efficient and versatile tool for
filtering strategies in medical genomics},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-14}},
pages = {S9},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S14-S9},
doi = {10.1186/1471-2105-13-S14-S9},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/CoutantCLLPCLD12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CoxM12,
author = {J{\"{u}}rgen Cox and
Matthias Mann},
title = {1D and 2D annotation enrichment: a statistical method integrating
quantitative proteomics with complementary high-throughput data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-16}},
pages = {S12},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S16-S12},
doi = {10.1186/1471-2105-13-S16-S12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CoxM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/CuiFH12,
author = {Guangyu Cui and
Chao Fang and
Kyungsook Han},
title = {Prediction of protein-protein interactions between viruses and human
by an {SVM} model},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-7}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S7-S5},
doi = {10.1186/1471-2105-13-S7-S5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/CuiFH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DagaF12,
author = {Mayank Daga and
Wu{-}chun Feng},
title = {Multi-dimensional characterization of electrostatic surface potential
computation on graphics processors},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-5}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S5-S4},
doi = {10.1186/1471-2105-13-S5-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DagaF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DalmanDND12,
author = {Mark R. Dalman and
Anthony Deeter and
Gayathri Nimishakavi and
Zhong{-}Hui Duan},
title = {Fold change and p-value cutoffs significantly alter microarray interpretations},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-2}},
pages = {S11},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S2-S11},
doi = {10.1186/1471-2105-13-S2-S11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DalmanDND12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Dinh12,
author = {Huy Q. Dinh},
title = {Epi-letters - how to describe epigenetic signatures},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-18}},
pages = {A4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S18-A4},
doi = {10.1186/1471-2105-13-S18-A4},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Dinh12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DittwaldOKG12,
author = {Piotr Dittwald and
Jerzy Ostrowski and
Jakub Karczmarski and
Anna Gambin},
title = {Inferring serum proteolytic activity from {LC-MS/MS} data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-5}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S5-S7},
doi = {10.1186/1471-2105-13-S5-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DittwaldOKG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DoerrTS12,
author = {Daniel Doerr and
Annelyse Th{\'{e}}venin and
Jens Stoye},
title = {Gene family assignment-free comparative genomics},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S3},
doi = {10.1186/1471-2105-13-S19-S3},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/DoerrTS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/EblenPRL12,
author = {John D. Eblen and
Charles A. Phillips and
Gary L. Rogers and
Michael A. Langston},
title = {The maximum clique enumeration problem: algorithms, applications,
and implementations},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S5},
doi = {10.1186/1471-2105-13-S10-S5},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/EblenPRL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/EdwardsG12,
author = {Matthew D. Edwards and
David K. Gifford},
title = {High-resolution genetic mapping with pooled sequencing},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-6}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S6-S8},
doi = {10.1186/1471-2105-13-S6-S8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/EdwardsG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/EfrosH12,
author = {Anatoly Efros and
Eran Halperin},
title = {Haplotype reconstruction using perfect phylogeny and sequence data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-6}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S6-S3},
doi = {10.1186/1471-2105-13-S6-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/EfrosH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/El-KaliobyAKGSWT12,
author = {Mohamed El{-}Kalioby and
Mohamed Abouelhoda and
Jan Kr{\"{u}}ger and
Robert Giegerich and
Alexander Sczyrba and
Dennis P. Wall and
Peter J. Tonellato},
title = {Personalized cloud-based bioinformatics services for research and
education: use cases and the elasticHPC package},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S22},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S22},
doi = {10.1186/1471-2105-13-S17-S22},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/El-KaliobyAKGSWT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ElHefnawiEF12,
author = {Mahmoud ElHefnawi and
Mohammad ElGamacy and
Mohamed Fares},
title = {Multiple virtual screening approaches for finding new Hepatitis c
virus RNA-dependent {RNA} polymerase inhibitors: Structure-based screens
and molecular dynamics for the pursue of new poly pharmacological
inhibitors},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S5},
doi = {10.1186/1471-2105-13-S17-S5},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ElHefnawiEF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Esquivel-RodriguezK12,
author = {Juan Esquivel{-}Rodr{\'{\i}}guez and
Daisuke Kihara},
title = {Evaluation of multiple protein docking structures using correctly
predicted pairwise subunits},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-2}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S2-S6},
doi = {10.1186/1471-2105-13-S2-S6},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/Esquivel-RodriguezK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FaldaTPLCFCVF12,
author = {Marco Falda and
Stefano Toppo and
Alessandro Pescarolo and
Enrico Lavezzo and
Barbara Di Camillo and
Andrea Facchinetti and
Elisa Cilia and
Riccardo Velasco and
Paolo Fontana},
title = {Argot2: a large scale function prediction tool relying on semantic
similarity of weighted Gene Ontology terms},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S14},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S14},
doi = {10.1186/1471-2105-13-S4-S14},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FaldaTPLCFCVF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FarfanMSMJ12,
author = {Fernando Farf{\'{a}}n and
Jun Ma and
Maureen A. Sartor and
George Michailidis and
H. V. Jagadish},
title = {{THINK} Back: KNowledge-based Interpretation of High Throughput data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-2}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S2-S4},
doi = {10.1186/1471-2105-13-S2-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FarfanMSMJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FioravantiHN12,
author = {Fabio Fioravanti and
Manuela Helmer{-}Citterich and
Enrico Nardelli},
title = {Modeling gene regulatory network motifs using statecharts},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S20},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S20},
doi = {10.1186/1471-2105-13-S4-S20},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FioravantiHN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FogolariCYJVE12,
author = {Federico Fogolari and
Alessandra Corazza and
Vijaylakshmi Yarra and
Anusha Jalaru and
Paolo Viglino and
Gennaro Esposito},
title = {Bluues: a program for the analysis of the electrostatic properties
of proteins based on generalized Born radii},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S18},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S18},
doi = {10.1186/1471-2105-13-S4-S18},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FogolariCYJVE12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/FuNLPDCWD12,
author = {Gang Fu and
Xiaofei Nan and
Haining Liu and
Ronak Y. Patel and
Pankaj R. Daga and
Yixin Chen and
Dawn Wilkins and
Robert J. Doerksen},
title = {Implementation of multiple-instance learning in drug activity prediction},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-15}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S15-S3},
doi = {10.1186/1471-2105-13-S15-S3},
timestamp = {Wed, 11 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/FuNLPDCWD12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GagnonBE12,
author = {Yves Gagnon and
Mathieu Blanchette and
Nadia El{-}Mabrouk},
title = {A flexible ancestral genome reconstruction method based on gapped
adjacencies},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S4},
doi = {10.1186/1471-2105-13-S19-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GagnonBE12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GannonSGB12,
author = {Matt Gannon and
Rachel Stevens and
Molly Griffith and
Mark Bardgett},
title = {The effects of early-life risperidone administration on forebrain
neurotrophin expression during adulthood},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A19},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A19},
doi = {10.1186/1471-2105-13-S12-A19},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GannonSGB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GoncearencoGBMA12,
author = {Alexander Goncearenco and
Priscila Grynberg and
Olga B. Botvinnik and
Geoff MacIntyre and
Thomas Abeel},
title = {Highlights from the Eighth International Society for Computational
Biology {(ISCB)} Student Council Symposium 2012},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-18}},
pages = {A1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S18-A1},
doi = {10.1186/1471-2105-13-S18-A1},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GoncearencoGBMA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GongTZG12,
author = {Jing Gong and
Yin Tong and
Hong{-}Mei Zhang and
An{-}Yuan Guo},
title = {miRNASNP: a database of miRNA related SNPs and their effects on miRNA
function},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-18}},
pages = {A2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S18-A2},
doi = {10.1186/1471-2105-13-S18-A2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GongTZG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GoreckiE12,
author = {Pawel G{\'{o}}recki and
Oliver Eulenstein},
title = {Algorithms: simultaneous error-correction and rooting for gene tree
reconciliation and the gene duplication problem},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S14},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S14},
doi = {10.1186/1471-2105-13-S10-S14},
timestamp = {Fri, 17 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GoreckiE12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GranholmNK12,
author = {Viktor Granholm and
William Stafford Noble and
Lukas K{\"{a}}ll},
title = {A cross-validation scheme for machine learning algorithms in shotgun
proteomics},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-16}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S16-S3},
doi = {10.1186/1471-2105-13-S16-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GranholmNK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GromihaH12,
author = {M. Michael Gromiha and
De{-}Shuang Huang},
title = {Introduction: advanced intelligent computing theories and their applications
in bioinformatics},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-7}},
pages = {I1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S7-I1},
doi = {10.1186/1471-2105-13-S7-I1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GromihaH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GromihaHSF12,
author = {M. Michael Gromiha and
K. Harini and
R. Sowdhamini and
Kazuhiko Fukui},
title = {Relationship between amino acid properties and functional parameters
in olfactory receptors and discrimination of mutants with enhanced
specificity},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-7}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S7-S1},
doi = {10.1186/1471-2105-13-S7-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/GromihaHSF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GuoW12,
author = {Fei Guo and
Lusheng Wang},
title = {Computing the protein binding sites},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S2},
doi = {10.1186/1471-2105-13-S10-S2},
timestamp = {Tue, 12 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/GuoW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HaghighiS12,
author = {Maryam Haghighi and
David Sankoff},
title = {Medians seek the corners, and other conjectures},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S5},
doi = {10.1186/1471-2105-13-S19-S5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HaghighiS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HanTPHMH12,
author = {Zhi Han and
Lu Tian and
Thierry P{\'{e}}cot and
Tim Hui{-}Ming Huang and
Raghu Machiraju and
Kun Huang},
title = {A signal processing approach for enriched region detection in {RNA}
polymerase {II} ChIP-seq data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-2}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S2-S2},
doi = {10.1186/1471-2105-13-S2-S2},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HanTPHMH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Harris12,
author = {Paul A. Harris},
title = {Research Electronic Data Capture (REDCap) - planning, collecting and
managing data for clinical and translational research},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A15},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A15},
doi = {10.1186/1471-2105-13-S12-A15},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Harris12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HarrisonFERP12,
author = {Benjamin J. Harrison and
Robert M. Flight and
Abdallah Eteleeb and
Eric C. Rouchka and
Jeffrey C. Petruska},
title = {RNASeq profiling of {UTR} expression during neuronal plasticity},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A4},
doi = {10.1186/1471-2105-13-S12-A4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HarrisonFERP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HeFB12,
author = {Lu He and
Alan M. Friedman and
Chris Bailey{-}Kellogg},
title = {Algorithms for optimizing cross-overs in {DNA} shuffling},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-3}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S3-S3},
doi = {10.1186/1471-2105-13-S3-S3},
timestamp = {Wed, 08 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HeFB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HeLYZ12,
author = {Jieyue He and
Chaojun Li and
Baoliu Ye and
Wei Zhong},
title = {Efficient and accurate greedy search methods for mining functional
modules in protein interaction networks},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S19},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S19},
doi = {10.1186/1471-2105-13-S10-S19},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HeLYZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HeinrichVBJWN12,
author = {Julian Heinrich and
Corinna Vehlow and
Florian Battke and
G{\"{u}}nter J{\"{a}}ger and
Daniel Weiskopf and
Kay Nieselt},
title = {iHAT: interactive Hierarchical Aggregation Table for Genetic Association
Data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-8}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S8-S2},
doi = {10.1186/1471-2105-13-S8-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HeinrichVBJWN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Hernandez-RosalesHWHMS12,
author = {Maribel Hernandez{-}Rosales and
Marc Hellmuth and
Nicolas Wieseke and
Katharina T. Huber and
Vincent Moulton and
Peter F. Stadler},
title = {From event-labeled gene trees to species trees},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S6},
doi = {10.1186/1471-2105-13-S19-S6},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/Hernandez-RosalesHWHMS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HerskovicSCBBB12,
author = {Jorge R. Herskovic and
Devika Subramanian and
Trevor Cohen and
Pamela A. Bozzo{-}Silva and
Charles F. Bearden and
Elmer V. Bernstam},
title = {Graph-based signal integration for high-throughput phenotyping},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-13}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S13-S2},
doi = {10.1186/1471-2105-13-S13-S2},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HerskovicSCBBB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HoLCHHP12,
author = {Hsiu J. Ho and
Tsung{-}I Lin and
Hannah H. Chang and
Steven B. Haase and
Sui Huang and
Saumyadipta Pyne},
title = {Parametric modeling of cellular state transitions as measured with
flow cytometry},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-5}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S5-S5},
doi = {10.1186/1471-2105-13-S5-S5},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HoLCHHP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HolecKZT12,
author = {Matej Holec and
Jir{\'{\i}} Kl{\'{e}}ma and
Filip Zelezn{\'{y}} and
Jakub Tolar},
title = {Comparative evaluation of set-level techniques in predictive classification
of gene expression samples},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S15},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S15},
doi = {10.1186/1471-2105-13-S10-S15},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HolecKZT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HolfordMCK12,
author = {Matthew Holford and
Jamie P. McCusker and
Kei{-}Hoi Cheung and
Michael Krauthammer},
title = {A semantic web framework to integrate cancer omics data with biological
knowledge},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-1}},
pages = {S10},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S1-S10},
doi = {10.1186/1471-2105-13-S1-S10},
timestamp = {Thu, 16 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HolfordMCK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HsiaoL12,
author = {Yu{-}Ting Hsiao and
Wei{-}Po Lee},
title = {Inferring robust gene networks from expression data by a sensitivity-based
incremental evolution method},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-7}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S7-S8},
doi = {10.1186/1471-2105-13-S7-S8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HsiaoL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuBJ12,
author = {Pingzhao Hu and
Shelley B. Bull and
Hui Jiang},
title = {Gene network modular-based classification of microarray samples},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S17},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S17},
doi = {10.1186/1471-2105-13-S10-S17},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuBJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuHH12,
author = {Qinmin Hu and
Jimmy X. Huang and
Xiaohua Hu},
title = {Modeling and mining term association for improving biomedical information
retrieval performance},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-9}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S9-S2},
doi = {10.1186/1471-2105-13-S9-S2},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HuHH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuangCKLCHHSCH12,
author = {Hui{-}Ling Huang and
Phasit Charoenkwan and
Te{-}Fen Kao and
Hua{-}Chin Lee and
Fang{-}Lin Chang and
Wen{-}Lin Huang and
Shinn{-}Jang Ho and
Li{-}Sun Shu and
Wen{-}Liang Chen and
Shinn{-}Ying Ho},
title = {Prediction and analysis of protein solubility using a novel scoring
card method with dipeptide composition},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S3},
doi = {10.1186/1471-2105-13-S17-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuangCKLCHHSCH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HuangWWGJ12,
author = {Yue Huang and
Lishi Wang and
Robert W. Williams and
Weikuan Gu and
Yan Jiao},
title = {Evaluation of potential role of Atp5g3 in modulating alcohol preference
and obesity},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A17},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A17},
doi = {10.1186/1471-2105-13-S12-A17},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HuangWWGJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HughesREBDRQF12,
author = {Adam Hughes and
Yang Ruan and
Saliya Ekanayake and
Seung{-}Hee Bae and
Qunfeng Dong and
Mina Rho and
Judy Qiu and
Geoffrey C. Fox},
title = {Interpolative multidimensional scaling techniques for the identification
of clusters in very large sequence sets},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-2}},
pages = {S9},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S2-S9},
doi = {10.1186/1471-2105-13-S2-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/HughesREBDRQF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/IacucciTPPMSM12,
author = {Ernesto Iacucci and
L{\'{e}}on{-}Charles Tranchevent and
Dusan Popovic and
Georgios A. Pavlopoulos and
Bart De Moor and
Reinhard Schneider and
Yves Moreau},
title = {A bioinformatics e-dating story: computational prediction and prioritization
of receptor-ligand pairs},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-18}},
pages = {A7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S18-A7},
doi = {10.1186/1471-2105-13-S18-A7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/IacucciTPPMSM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JahnSS12,
author = {Katharina Jahn and
Henner Sudek and
Jens Stoye},
title = {Multiple genome comparison based on overlap regions of pairwise local
alignments},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S7},
doi = {10.1186/1471-2105-13-S19-S7},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JahnSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JahnZKS12,
author = {Katharina Jahn and
Chunfang Zheng and
Jakub Kov{\'{a}}c and
David Sankoff},
title = {A consolidation algorithm for genomes fractionated after higher order
polyploidization},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S8},
doi = {10.1186/1471-2105-13-S19-S8},
timestamp = {Thu, 09 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/JahnZKS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JancuraMPM12,
author = {Pavol Jancura and
Eleftheria Mavridou and
Enrique Carrillo{-}de Santa Pau and
Elena Marchiori},
title = {A methodology for detecting the orthology signal in a {PPI} network
at a functional complex level},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S18},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S18},
doi = {10.1186/1471-2105-13-S10-S18},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/JancuraMPM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JangGL12,
author = {Richard Jang and
Xin Gao and
Ming Li},
title = {Combining automated peak tracking in {SAR} by {NMR} with structure-based
backbone assignment from \({}^{\mbox{15}}\)N-NOESY},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-3}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S3-S4},
doi = {10.1186/1471-2105-13-S3-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JangGL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JayEZBPSVCL12,
author = {Jeremy J. Jay and
John D. Eblen and
Yun Zhang and
Mikael Benson and
Andy D. Perkins and
Arnold M. Saxton and
Brynn H. Voy and
Elissa J. Chesler and
Michael A. Langston},
title = {A systematic comparison of genome-scale clustering algorithms},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S7},
doi = {10.1186/1471-2105-13-S10-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JayEZBPSVCL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JayaramSMMSS12,
author = {Bhyravabhotla Jayaram and
Tanya Singh and
Goutam Mukherjee and
Abhinav Mathur and
Shashank Shekhar and
Vandana Shekhar},
title = {Sanjeevini: a freely accessible web-server for target directed lead
molecule discovery},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S7},
doi = {10.1186/1471-2105-13-S17-S7},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JayaramSMMSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JentzschH12,
author = {Franziska Jentzsch and
Jennifer V. Hines},
title = {Interfacing medicinal chemistry with structural bioinformatics: implications
for {T} box riboswitch {RNA} drug discovery},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-2}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S2-S5},
doi = {10.1186/1471-2105-13-S2-S5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JentzschH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JeongKB12,
author = {Kyowon Jeong and
Sangtae Kim and
Nuno Bandeira},
title = {False discovery rates in spectral identification},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-16}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S16-S2},
doi = {10.1186/1471-2105-13-S16-S2},
timestamp = {Fri, 20 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JeongKB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JhaL12,
author = {Sumit Kumar Jha and
Christopher James Langmead},
title = {Exploring behaviors of stochastic differential equation models of
biological systems using change of measures},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-5}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S5-S8},
doi = {10.1186/1471-2105-13-S5-S8},
timestamp = {Wed, 19 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/JhaL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JiMQJMLLL12,
author = {Yuan Ji and
Riten Mitra and
Fernando Quintana and
Alejandro Jara and
Peter M{\"{u}}ller and
Ping Liu and
Yue Lu and
Shoudan Liang},
title = {{BM-BC:} a Bayesian method of base calling for Solexa sequence data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-13}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S13-S6},
doi = {10.1186/1471-2105-13-S13-S6},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JiMQJMLLL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JiangW12,
author = {Jonathan Q. Jiang and
Maoying Wu},
title = {Predicting multiplex subcellular localization of proteins using protein-protein
interaction network: a comparative study},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S20},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S20},
doi = {10.1186/1471-2105-13-S10-S20},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JiangW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JiaoMLG12,
author = {Yan Jiao and
Yonghui Ma and
Xiaoyun Liu and
Weikuan Gu},
title = {Evaluation of potential role of vitamin {C} in differential skeletal
development between female and male mice using a mouse model},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A18},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A18},
doi = {10.1186/1471-2105-13-S12-A18},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JiaoMLG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JoungKSZ12,
author = {Je{-}Gun Joung and
Soo{-}Jin Kim and
Soo{-}Yong Shin and
Byoung{-}Tak Zhang},
title = {A probabilistic coevolutionary biclustering algorithm for discovering
coherent patterns in gene expression dataset},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S12},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S12},
doi = {10.1186/1471-2105-13-S17-S12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JoungKSZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JungMKKP12,
author = {Kwang Su Jung and
Sanghoon Moon and
Young Kim and
Bong{-}Jo Kim and
Kiejung Park},
title = {Genovar: a detection and visualization tool for genomic variants},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-7}},
pages = {S12},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S7-S12},
doi = {10.1186/1471-2105-13-S7-S12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JungMKKP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/JuppHIKOSWS12,
author = {Simon Jupp and
Matthew Horridge and
Luigi Iannone and
Julie Klein and
Stuart Owen and
Joost Schanstra and
Katy Wolstencroft and
Robert Stevens},
title = {Populous: a tool for building {OWL} ontologies from templates},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-1}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S1-S5},
doi = {10.1186/1471-2105-13-S1-S5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/JuppHIKOSWS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KaewkamnerdUIPCT12,
author = {Saowaluck Kaewkamnerd and
Chairat Uthaipibull and
Apichart Intarapanich and
Montri Pannarut and
Sastra Chaotheing and
Sissades Tongsima},
title = {An automatic device for detection and classification of malaria parasite
species in thick blood film},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S18},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S18},
doi = {10.1186/1471-2105-13-S17-S18},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KaewkamnerdUIPCT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KakaradovXLJF12,
author = {Boyko Kakaradov and
Hui Yuan Xiong and
Leo J. Lee and
Nebojsa Jojic and
Brendan J. Frey},
title = {Challenges in estimating percent inclusion of alternatively spliced
junctions from RNA-seq data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-6}},
pages = {S11},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S6-S11},
doi = {10.1186/1471-2105-13-S6-S11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KakaradovXLJF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KarpievitchDS12,
author = {Yuliya V. Karpievitch and
Alan R. Dabney and
Richard D. Smith},
title = {Normalization and missing value imputation for label-free {LC-MS}
analysis},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-16}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S16-S5},
doi = {10.1186/1471-2105-13-S16-S5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KarpievitchDS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KemperHRK12,
author = {Alexander Kemper and
Musa Hindi and
Kenneth S. Ramos and
Theodore S. Kalbfleisch},
title = {Comprehensive characterization of an individual's {LINE-1} insertion
profile using next generation sequencing data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A2},
doi = {10.1186/1471-2105-13-S12-A2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KemperHRK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KennedyR12,
author = {Jessie Kennedy and
Jos B. T. M. Roerdink},
title = {Highlights of the 1st {IEEE} Symposium on Biological Data Visualization},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-8}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S8-S1},
doi = {10.1186/1471-2105-13-S8-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KennedyR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Key12,
author = {Melissa Key},
title = {A tutorial in displaying mass spectrometry-based proteomic data using
heat maps},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-16}},
pages = {S10},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S16-S10},
doi = {10.1186/1471-2105-13-S16-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Key12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KhrameevaG12,
author = {Ekaterina Khrameeva and
Mikhail S. Gelfand},
title = {Biases in read coverage demonstrated by interlaboratory and interplatform
comparison of 117 mRNA and genome sequencing experiments},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-6}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S6-S4},
doi = {10.1186/1471-2105-13-S6-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KhrameevaG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KilicogluB12,
author = {Halil Kilicoglu and
Sabine Bergler},
title = {Biological event composition},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-11}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S11-S7},
doi = {10.1186/1471-2105-13-S11-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KilicogluB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KimCG12,
author = {Bong{-}Hyun Kim and
Bhadrachalam Chitturi and
Nick V. Grishin},
title = {Self consistency grouping: a stringent clustering method},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-13}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S13-S3},
doi = {10.1186/1471-2105-13-S13-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KimCG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KimNWTTY12,
author = {Jin{-}Dong Kim and
Ngan L. T. Nguyen and
Yue Wang and
Jun'ichi Tsujii and
Toshihisa Takagi and
Akinori Yonezawa},
title = {The Genia Event and Protein Coreference tasks of the BioNLP Shared
Task 2011},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-11}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S11-S1},
doi = {10.1186/1471-2105-13-S11-S1},
timestamp = {Tue, 02 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/KimNWTTY12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KoesslerJURP12,
author = {Denise R. Koessler and
Elizabeth G. Johnson and
Jordan M. Utley and
Harry A. Richards and
Cynthia B. Peterson},
title = {Building better interdisciplinary scientists: creating graduate level
courses to address the communication gap in interdisciplinary research},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A9},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A9},
doi = {10.1186/1471-2105-13-S12-A9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KoesslerJURP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KohPTW12,
author = {Chuan Hock Koh and
Sucheendra K. Palaniappan and
P. S. Thiagarajan and
Limsoon Wong},
title = {Improved statistical model checking methods for pathway analysis},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S15},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S15},
doi = {10.1186/1471-2105-13-S17-S15},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KohPTW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KrugerRO12,
author = {Felix A. Kr{\"{u}}ger and
Raghd Rostom and
John P. Overington},
title = {Mapping small molecule binding data to structural domains},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S11},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S11},
doi = {10.1186/1471-2105-13-S17-S11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KrugerRO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LahiriSSAC12,
author = {Chandrajit Lahiri and
Pawar Shrikant and
Radhakrishnan Sabarinathan and
M. Izhar Ashraf and
Dipshikha Chakravortty},
title = {Identifying indispensable proteins of the type {III} secretion systems
of Salmonella enterica serovar Typhimurium strain {LT2}},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A10},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A10},
doi = {10.1186/1471-2105-13-S12-A10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LahiriSSAC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LaiWJW12,
author = {En{-}Yu Lai and
Wei{-}Bung Wang and
Tao Jiang and
Kun{-}Pin Wu},
title = {A linear-time algorithm for reconstructing zero-recombinant haplotype
configuration on a pedigree},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S19},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S19},
doi = {10.1186/1471-2105-13-S17-S19},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LaiWJW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LandeghemBABSP12,
author = {Sofie Van Landeghem and
Jari Bj{\"{o}}rne and
Thomas Abeel and
Bernard De Baets and
Tapio Salakoski and
Yves Van de Peer},
title = {Semantically linking molecular entities in literature through entity
relationships},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-11}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S11-S6},
doi = {10.1186/1471-2105-13-S11-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LandeghemBABSP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Lazzerini-OspriSLM12,
author = {Lorenzo Lazzerini{-}Ospri and
Pasquale Stano and
Pier Luigi Luisi and
Roberto Marangoni},
title = {Characterization of the emergent properties of a synthetic quasi-cellular
system},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S9},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S9},
doi = {10.1186/1471-2105-13-S4-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Lazzerini-OspriSLM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LeccaM12,
author = {Paola Lecca and
Daniele Morpurgo},
title = {Modelling non-homogeneous stochastic reaction-diffusion systems: the
case study of gemcitabine-treated non-small cell lung cancer growth},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-14}},
pages = {S14},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S14-S14},
doi = {10.1186/1471-2105-13-S14-S14},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LeccaM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LeeK12,
author = {Minho Lee and
Dongsup Kim},
title = {Large-scale reverse docking profiles and their applications},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S6},
doi = {10.1186/1471-2105-13-S17-S6},
timestamp = {Thu, 05 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LeeK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LeePFT12,
author = {Heewook Lee and
Ellen Popodi and
Patricia L. Foster and
Haixu Tang},
title = {Detecting structural variants involving repetitive elements: capturing
transposition events of {IS} elements in the genome of Escherichia
coli},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-18}},
pages = {A12},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S18-A12},
doi = {10.1186/1471-2105-13-S18-A12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LeePFT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LeiYJZH12,
author = {Ying{-}Ke Lei and
Zhuhong You and
Zhen Ji and
Lin Zhu and
De{-}Shuang Huang},
title = {Assessing and predicting protein interactions by combining manifold
embedding with multiple information integration},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-7}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S7-S3},
doi = {10.1186/1471-2105-13-S7-S3},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LeiYJZH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiR12,
author = {Yong Fuga Li and
Predrag Radivojac},
title = {Computational approaches to protein inference in shotgun proteomics},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-16}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S16-S4},
doi = {10.1186/1471-2105-13-S16-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiZ12,
author = {Yuan Li and
Shaojie Zhang},
title = {Predicting folding pathways between {RNA} conformational structures
guided by {RNA} stacks},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-3}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S3-S5},
doi = {10.1186/1471-2105-13-S3-S5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiangXZW12,
author = {Xijun Liang and
Zhonghang Xia and
Li{-}Wei Zhang and
Fang{-}Xiang Wu},
title = {Inference of gene regulatory subnetworks from time course gene expression
data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-9}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S9-S3},
doi = {10.1186/1471-2105-13-S9-S3},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LiangXZW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LimFK12,
author = {Kyungtaek Lim and
Yoshikazu Furuta and
Ichizo Kobayashi},
title = {Unexpected variations in translation initiation machinery},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-18}},
pages = {A5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S18-A5},
doi = {10.1186/1471-2105-13-S18-A5},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/LimFK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LimW12,
author = {Kevin Lim and
Limsoon Wong},
title = {{CMPF:} Class-switching minimized pathfinding in metabolic networks},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S17},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S17},
doi = {10.1186/1471-2105-13-S17-S17},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LimW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LinBE12,
author = {Harris T. Lin and
J. Gordon Burleigh and
Oliver Eulenstein},
title = {Consensus properties for the deep coalescence problem and their application
for scalable tree search},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S12},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S12},
doi = {10.1186/1471-2105-13-S10-S12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LinBE12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LioPMAMV12,
author = {Pietro Li{\`{o}} and
Nicola Paoletti and
Mohammad Ali Moni and
Kathryn Atwell and
Emanuela Merelli and
Marco Viceconti},
title = {Modelling osteomyelitis},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-14}},
pages = {S12},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S14-S12},
doi = {10.1186/1471-2105-13-S14-S12},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LioPMAMV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuMY12,
author = {Zhifa Liu and
Brandon M. Malone and
Changhe Yuan},
title = {Empirical evaluation of scoring functions for Bayesian network model
selection},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-15}},
pages = {S14},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S15-S14},
doi = {10.1186/1471-2105-13-S15-S14},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuMY12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LiuWQLZTC12,
author = {Zhi{-}Ping Liu and
Jiguang Wang and
Yu{-}Qing Qiu and
Ross K. K. Leung and
Xiang{-}Sun Zhang and
Stephen Kwok{-}Wing Tsui and
Luonan Chen},
title = {Inferring a protein interaction map of Mycobacterium tuberculosis
based on sequences and interologs},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-7}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S7-S6},
doi = {10.1186/1471-2105-13-S7-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LiuWQLZTC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LivengoodM0E12,
author = {Philip Livengood and
Ross Maciejewski and
Wei Chen and
David S. Ebert},
title = {OmicsVis: an interactive tool for visually analyzing metabolomics
data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-8}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S8-S6},
doi = {10.1186/1471-2105-13-S8-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LivengoodM0E12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LlavoriJN12,
author = {Rafael Berlanga Llavori and
Ernesto Jim{\'{e}}nez{-}Ruiz and
Victoria Nebot},
title = {Exploring and linking biomedical resources through multidimensional
semantic spaces},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-1}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S1-S6},
doi = {10.1186/1471-2105-13-S1-S6},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LlavoriJN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LuoC12,
author = {Weimin Luo and
Keith C. C. Chan},
title = {Discovering patterns in drug-protein interactions based on their fingerprints},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-9}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S9-S4},
doi = {10.1186/1471-2105-13-S9-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/LuoC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MaJZG12,
author = {Yonghui Ma and
Yan Jiao and
Fusheng Zhao and
Weikuan Gu},
title = {Evaluation of gene expression in muscle in mouse model lacking of
vitamin {C} synthesis},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A11},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A11},
doi = {10.1186/1471-2105-13-S12-A11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MaJZG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MaVN12,
author = {Kelvin Ma and
Olga Vitek and
Alexey I. Nesvizhskii},
title = {A statistical model-building perspective to identification of {MS/MS}
spectra with PeptideProphet},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-16}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S16-S1},
doi = {10.1186/1471-2105-13-S16-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MaVN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MadahianKKH12,
author = {Behrouz Madahian and
Robert C. Klesges and
Lisa Klesges and
Ramin Homayouni},
title = {System dynamics modeling of childhood obesity},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A13},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A13},
doi = {10.1186/1471-2105-13-S12-A13},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MadahianKKH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MahantaABK12,
author = {Priyakshi Mahanta and
Hasin Afzal Ahmed and
Dhruba K. Bhattacharyya and
Jugal K. Kalita},
title = {An effective method for network module extraction from microarray
data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-13}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S13-S4},
doi = {10.1186/1471-2105-13-S13-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MahantaABK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MahmoodyKR12,
author = {Ahmad Mahmoody and
Crystal L. Kahn and
Benjamin J. Raphael},
title = {Reconstructing genome mixtures from partial adjacencies},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S9},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S9},
doi = {10.1186/1471-2105-13-S19-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MahmoodyKR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MailletLCLP12,
author = {Nicolas Maillet and
Claire Lemaitre and
Rayan Chikhi and
Dominique Lavenier and
Pierre Peterlongo},
title = {Compareads: comparing huge metagenomic experiments},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S10},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S10},
doi = {10.1186/1471-2105-13-S19-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MailletLCLP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MaloviniBBM12,
author = {Alberto Malovini and
Nicola Barbarini and
Riccardo Bellazzi and
Francesca De Michelis},
title = {Hierarchical Naive Bayes for genetic association studies},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-14}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S14-S6},
doi = {10.1186/1471-2105-13-S14-S6},
timestamp = {Thu, 23 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MaloviniBBM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MangulCBMZ12,
author = {Serghei Mangul and
Adrian Caciula and
Dumitru Brinza and
Ion I. Mandoiu and
Alex Zelikovsky},
title = {{TRIP:} a method for novel transcript reconstruction from paired-end
RNA-seq reads},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-18}},
pages = {A11},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S18-A11},
doi = {10.1186/1471-2105-13-S18-A11},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MangulCBMZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ManiAC12,
author = {Deepak R. Mani and
Susan E. Abbatiello and
Steven A. Carr},
title = {Statistical characterization of multiple-reaction monitoring mass
spectrometry {(MRM-MS)} assays for quantitative proteomics},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-16}},
pages = {S9},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S16-S9},
doi = {10.1186/1471-2105-13-S16-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ManiAC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ManuchPWCT12,
author = {J{\'{a}}n Manuch and
Murray Patterson and
Roland Wittler and
C{\'{e}}dric Chauve and
Eric Tannier},
title = {Linearization of ancestral multichromosomal genomes},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S11},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S11},
doi = {10.1186/1471-2105-13-S19-S11},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ManuchPWCT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MarshallDDP12,
author = {Dana Marshall and
Jianan Dong and
Leon Dent and
Siddharth Pratap},
title = {The antibiotic resistance proteome of Acinetobacter baumanii {MDR}
isolate MMC{\#}4},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A20},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A20},
doi = {10.1186/1471-2105-13-S12-A20},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MarshallDDP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Mavelli12,
author = {Fabio Mavelli},
title = {Stochastic simulations of minimal cells: the Ribocell model},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S10},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S10},
doi = {10.1186/1471-2105-13-S4-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Mavelli12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MayerichBTR12,
author = {David Mayerich and
Christopher Bj{\"{o}}rnsson and
Jonothan Taylor and
Badrinath Roysam},
title = {NetMets: software for quantifying and visualizing errors in biological
network segmentation},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-8}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S8-S7},
doi = {10.1186/1471-2105-13-S8-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MayerichBTR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/McCarthyVW12,
author = {E. Luke McCarthy and
Benjamin P. Vandervalk and
Mark D. Wilkinson},
title = {{SPARQL} Assist language-neutral query composer},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-1}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S1-S2},
doi = {10.1186/1471-2105-13-S1-S2},
timestamp = {Tue, 04 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/McCarthyVW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/McCloskyRSMM12,
author = {David McClosky and
Sebastian Riedel and
Mihai Surdeanu and
Andrew McCallum and
Christopher D. Manning},
title = {Combining joint models for biomedical event extraction},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-11}},
pages = {S9},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S11-S9},
doi = {10.1186/1471-2105-13-S11-S9},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/McCloskyRSMM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/McEachinSCKVS12,
author = {Richard C. McEachin and
Keerthi S. Sannareddy and
James D. Cavalcoli and
Alla Karnovsky and
Jacqueline M. Vink and
Maureen A. Sartor},
title = {Convergence of genetic influences in comorbidity},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-2}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S2-S8},
doi = {10.1186/1471-2105-13-S2-S8},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/McEachinSCKVS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/McLeodFB12,
author = {Kenneth McLeod and
Gus Ferguson and
Albert Burger},
title = {Argudas: lessons for argumentation in biology based on a gene expression
use case},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-1}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S1-S8},
doi = {10.1186/1471-2105-13-S1-S8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/McLeodFB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MenonGGR12,
author = {Ranjeeta Menon and
Gagan Garg and
Robin B. Gasser and
Shoba Ranganathan},
title = {TranSeqAnnotator: large-scale analysis of transcriptomic data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S24},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S24},
doi = {10.1186/1471-2105-13-S17-S24},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MenonGGR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MerelliVM12,
author = {Ivan Merelli and
Federica Viti and
Luciano Milanesi},
title = {IBDsite: a Galaxy-interacting, integrative database for supporting
inflammatory bowel disease high throughput data analysis},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-14}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S14-S5},
doi = {10.1186/1471-2105-13-S14-S5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MerelliVM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MijatovicISXMPMM12,
author = {Vladan Mijatovic and
Ilaria Iacobucci and
Marco Sazzini and
Luciano Xumerle and
Antonio Mori and
Pier Franco Pignatti and
Giovanni Martinelli and
Giovanni Malerba},
title = {Imputation reliability on {DNA} biallelic markers for drug metabolism
studies},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-14}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S14-S7},
doi = {10.1186/1471-2105-13-S14-S7},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MijatovicISXMPMM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MironovSBASK12,
author = {Vladimir Mironov and
Nirmala Seethappan and
Ward Blond{\'{e}} and
Erick Antezana and
Andrea Splendiani and
Martin Kuiper},
title = {Gauging triple stores with actual biological data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-1}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S1-S3},
doi = {10.1186/1471-2105-13-S1-S3},
timestamp = {Tue, 16 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/MironovSBASK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MogilSL12,
author = {Lauren S. Mogil and
Kamil Slowikowski and
Howard M. Laten},
title = {Computational and experimental analyses of retrotransposon-associated
minisatellite DNAs in the soybean genome},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-2}},
pages = {S13},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S2-S13},
doi = {10.1186/1471-2105-13-S2-S13},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MogilSL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MooreJS12,
author = {Neil Moore and
Jerzy W. Jaromczyk and
Christopher L. Schardl},
title = {Finding long protein products of alternatively spliced genes},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A12},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A12},
doi = {10.1186/1471-2105-13-S12-A12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MooreJS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MoslehMMMS12,
author = {Mogeeb A. A. Mosleh and
Hayat Manssor and
Sorayya Malek and
Pozi Milow and
Aishah Salleh},
title = {A preliminary study on automated freshwater algae recognition and
classification system},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S25},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S25},
doi = {10.1186/1471-2105-13-S17-S25},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MoslehMMMS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MozhayskiyT12,
author = {Vadim Mozhayskiy and
Ilias Tagkopoulos},
title = {Guided evolution of in silico microbial populations in complex environments
accelerates evolutionary rates through a step-wise adaptation},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S10},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S10},
doi = {10.1186/1471-2105-13-S10-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MozhayskiyT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MozhayskiyT12a,
author = {Vadim Mozhayskiy and
Ilias Tagkopoulos},
title = {Horizontal gene transfer dynamics and distribution of fitness effects
during microbial in silico evolution},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S13},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S13},
doi = {10.1186/1471-2105-13-S10-S13},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MozhayskiyT12a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MunozS12,
author = {Adriana Mu{\~{n}}oz and
David Sankoff},
title = {Detection of gene expression changes at chromosomal rearrangement
breakpoints in evolution},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-3}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S3-S6},
doi = {10.1186/1471-2105-13-S3-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MunozS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NadalinVP12,
author = {Francesca Nadalin and
Francesco Vezzi and
Alberto Policriti},
title = {GapFiller: a de novo assembly approach to fill the gap within paired
reads},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-14}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S14-S8},
doi = {10.1186/1471-2105-13-S14-S8},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/NadalinVP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NahnsenK12,
author = {Sven Nahnsen and
Oliver Kohlbacher},
title = {In silico design of targeted SRM-based experiments},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-16}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S16-S8},
doi = {10.1186/1471-2105-13-S16-S8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/NahnsenK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NakamuraHSSS12,
author = {Masaomi Nakamura and
Tsuyoshi Hachiya and
Yutaka Saito and
Kengo Sato and
Yasubumi Sakakibara},
title = {An efficient algorithm for de novo predictions of biochemical pathways
between chemical compounds},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S8},
doi = {10.1186/1471-2105-13-S17-S8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/NakamuraHSSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NanduPP12,
author = {Tulip Nandu and
Meeta Pradhan and
Mathew J. Palakal},
title = {Elucidating gene signatures that control the circadian rhythm in cyanobacteria
using bioinformatics methods},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-18}},
pages = {A9},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S18-A9},
doi = {10.1186/1471-2105-13-S18-A9},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/NanduPP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ObergM12,
author = {Ann L. Oberg and
Douglas W. Mahoney},
title = {Statistical methods for quantitative mass spectrometry proteomic experiments
with labeling},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-16}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S16-S7},
doi = {10.1186/1471-2105-13-S16-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ObergM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/OesperRADR12,
author = {Layla Oesper and
Anna M. Ritz and
Sarah J. Aerni and
Ryan Drebin and
Benjamin J. Raphael},
title = {Reconstructing cancer genomes from paired-end sequencing data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-6}},
pages = {S10},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S6-S10},
doi = {10.1186/1471-2105-13-S6-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/OesperRADR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/OhLKWHP12,
author = {Sohee Oh and
Jaehoon Lee and
Min{-}Seok Kwon and
Bruce Weir and
Kyooseob Ha and
Taesung Park},
title = {A novel method to identify high order gene-gene interactions in genome-wide
association studies: Gene-based {MDR}},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-9}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S9-S5},
doi = {10.1186/1471-2105-13-S9-S5},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/OhLKWHP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PannaraleCCGLPRSL12,
author = {Paolo Pannarale and
Domenico Catalano and
Giorgio De Caro and
Giorgio Grillo and
Pietro Leo and
Graziano Pappad{\`{a}} and
Francesco Rubino and
Gaetano Scioscia and
Flavio Licciulli},
title = {{GIDL:} a rule based expert system for GenBank Intelligent Data Loading
into the Molecular Biodiversity database},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S4},
doi = {10.1186/1471-2105-13-S4-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PannaraleCCGLPRSL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParkLH12,
author = {Byungkyu Park and
Wook Lee and
Kyungsook Han},
title = {Modeling the interactions of Alzheimer-related genes from the whole
brain microarray data and diffusion tensor images of human brain},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-7}},
pages = {S10},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S7-S10},
doi = {10.1186/1471-2105-13-S7-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ParkLH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParkN12,
author = {Hyun Jung Park and
Luay Nakhleh},
title = {Inference of reticulate evolutionary histories by maximum likelihood:
the performance of information criteria},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S12},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S12},
doi = {10.1186/1471-2105-13-S19-S12},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ParkN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParkSH12,
author = {Sungin Park and
Soo{-}Yong Shin and
Kyu{-}Baek Hwang},
title = {{CFMDS:} CUDA-based fast multidimensional scaling for genome-scale
data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S23},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S23},
doi = {10.1186/1471-2105-13-S17-S23},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ParkSH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ParryPW12,
author = {R. Mitchell Parry and
John H. Phan and
May D. Wang},
title = {Win percentage: a novel measure for assessing the suitability of machine
classifiers for biological problems},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-3}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S3-S7},
doi = {10.1186/1471-2105-13-S3-S7},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ParryPW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PatersonGKL12,
author = {Trevor Paterson and
Martin Graham and
Jessie B. Kennedy and
Andy Law},
title = {{VIPER:} a visualisation tool for exploring inheritance inconsistencies
in genotyped pedigrees},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-8}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S8-S5},
doi = {10.1186/1471-2105-13-S8-S5},
timestamp = {Tue, 26 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PatersonGKL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PattonJN12,
author = {Kristopher L. Patton and
David J. John and
James L. Norris},
title = {Bayesian probabilistic network modeling from multiple independent
replicates},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-9}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S9-S6},
doi = {10.1186/1471-2105-13-S9-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PattonJN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PechanG12,
author = {Tibor Pechan and
Steven R. Gwaltney},
title = {Calculations of relative intensities of fragment ions in the {MSMS}
spectra of a doubly charged penta-peptide},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-15}},
pages = {S13},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S15-S13},
doi = {10.1186/1471-2105-13-S15-S13},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PechanG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PellegriniRV12,
author = {Marco Pellegrini and
Maria Elena Renda and
Alessio Vecchio},
title = {Ab initio detection of fuzzy amino acid tandem repeats in protein
sequences},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-3}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S3-S8},
doi = {10.1186/1471-2105-13-S3-S8},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/PellegriniRV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PellegriniRV12a,
author = {Marco Pellegrini and
Maria Elena Renda and
Alessio Vecchio},
title = {Tandem repeats discovery service (TReaDS) applied to finding novel
cis-acting factors in repeat expansion diseases},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S3},
doi = {10.1186/1471-2105-13-S4-S3},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/PellegriniRV12a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PiovesanPMC12,
author = {Damiano Piovesan and
Giuseppe Profiti and
Pier Luigi Martelli and
Rita Casadio},
title = {The human "magnesome": detecting magnesium binding sites on human
proteins},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-14}},
pages = {S10},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S14-S10},
doi = {10.1186/1471-2105-13-S14-S10},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PiovesanPMC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PirolaRPPVB12,
author = {Yuri Pirola and
Raffaella Rizzi and
Ernesto Picardi and
Graziano Pesole and
Gianluca Della Vedova and
Paola Bonizzoni},
title = {PIntron: a fast method for detecting the gene structure due to alternative
splicing via maximal pairings of a pattern and a text},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-5}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S5-S2},
doi = {10.1186/1471-2105-13-S5-S2},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/PirolaRPPVB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ProkopLDM12,
author = {Jeremy W. Prokop and
Thomas C. Leeper and
Zhong{-}Hui Duan and
Amy Milsted},
title = {Amino acid function and docking site prediction through combining
disease variants, structure alignments, sequence alignments, and molecular
dynamics: a study of the {HMG} domain},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-2}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S2-S3},
doi = {10.1186/1471-2105-13-S2-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ProkopLDM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PtitsynM12,
author = {Andrey A. Ptitsyn and
Leonid L. Moroz},
title = {Computational workflow for analysis of gain and loss of genes in distantly
related genomes},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-15}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S15-S5},
doi = {10.1186/1471-2105-13-S15-S5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PtitsynM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/PyysaloORSMWSTA12,
author = {Sampo Pyysalo and
Tomoko Ohta and
Rafal Rak and
Daniel E. Sullivan and
Chunhong Mao and
Chunxia Wang and
Bruno W. S. Sobral and
Jun'ichi Tsujii and
Sophia Ananiadou},
title = {Overview of the ID, {EPI} and {REL} tasks of BioNLP Shared Task 2011},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-11}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S11-S2},
doi = {10.1186/1471-2105-13-S11-S2},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/PyysaloORSMWSTA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/QiuZ12,
author = {Peng Qiu and
Li Zhang},
title = {Identification of markers associated with global changes in {DNA}
methylation regulation in cancers},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-13}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S13-S7},
doi = {10.1186/1471-2105-13-S13-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/QiuZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RajadinakaranSRRS12,
author = {Gopinath Rajadinakaran and
Huifang Sun and
Claire Rinehart and
Eric C. Rouchka and
Michael E. Smith},
title = {Regulation of cell proliferation and apoptosis by growth hormone during
zebrafish auditory hair cell regeneration},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A3},
doi = {10.1186/1471-2105-13-S12-A3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RajadinakaranSRRS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RatkovicGW12,
author = {Zorana Ratkovic and
Wiktoria Golik and
Pierre Warnier},
title = {Event extraction of bacteria biotopes: a knowledge-intensive NLP-based
approach},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-11}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S11-S8},
doi = {10.1186/1471-2105-13-S11-S8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RatkovicGW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ReV12,
author = {Matteo Re and
Giorgio Valentini},
title = {Cancer module genes ranking using kernelized score functions},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-14}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S14-S3},
doi = {10.1186/1471-2105-13-S14-S3},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ReV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ReddyKWLBN12,
author = {Joseph S. Reddy and
Ranjit Kumar and
James M. Watt and
Mark L. Lawrence and
Shane C. Burgess and
Bindu Nanduri},
title = {Transcriptome profile of a bovine respiratory disease pathogen: Mannheimia
haemolytica {PHL213}},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-15}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S15-S4},
doi = {10.1186/1471-2105-13-S15-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ReddyKWLBN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RempeBEB12,
author = {Caroline Rempe and
Charles R. Budinoff and
T. Effler and
Alison Buchan},
title = {The influence of sample biases on estimations of marine microbial
diversity},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A5},
doi = {10.1186/1471-2105-13-S12-A5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RempeBEB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RiehleCJMTPRMSRDSAVM12,
author = {Kevin Riehle and
Cristian Coarfa and
Andrew R. Jackson and
Jun Ma and
Arpit Tandon and
Sameer Paithankar and
Sriram Raghuraman and
Toni{-}Ann Mistretta and
Delphine Saulnier and
Sabeen Raza and
Maria Diaz and
Robert Shulman and
Kjersti Aagaard and
James Versalovic and
Aleksandar Milosavljevic},
title = {The Genboree Microbiome Toolset and the analysis of 16S rRNA microbial
sequences},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-13}},
pages = {S11},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S13-S11},
doi = {10.1186/1471-2105-13-S13-S11},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/RiehleCJMTPRMSRDSAVM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RiveraTM12,
author = {Corban G. Rivera and
Brett M. Tyler and
T. M. Murali},
title = {Sensitive detection of pathway perturbations in cancers},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-3}},
pages = {S9},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S3-S9},
doi = {10.1186/1471-2105-13-S3-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RiveraTM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RomanoH12,
author = {Paolo Romano and
Manuela Helmer{-}Citterich},
title = {Bioinformatics in Italy: BITS2011, the Eighth Annual Meeting of the
Italian Society of Bioinformatics},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {I1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-I1},
doi = {10.1186/1471-2105-13-S4-I1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RomanoH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RouchkaFM12,
author = {Eric C. Rouchka and
Robert M. Flight and
Hunter N. B. Moseley},
title = {Proceedings of the Eleventh Annual {UT-ORNL-KBRIN} Bioinformatics
Summit 2012},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A1},
doi = {10.1186/1471-2105-13-S12-A1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RouchkaFM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RozovHS12,
author = {Roye Rozov and
Eran Halperin and
Ron Shamir},
title = {{MGMR:} leveraging RNA-Seq population data to optimize expression
estimation},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-6}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S6-S2},
doi = {10.1186/1471-2105-13-S6-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/RozovHS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SacomotoKCUASPL12,
author = {Gustavo Akio Tominaga Sacomoto and
Janice Kielbassa and
Rayan Chikhi and
Raluca Uricaru and
Pavlos Antoniou and
Marie{-}France Sagot and
Pierre Peterlongo and
Vincent Lacroix},
title = {{KISSPLICE:} de-novo calling alternative splicing events from RNA-seq
data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-6}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S6-S5},
doi = {10.1186/1471-2105-13-S6-S5},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SacomotoKCUASPL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SaelK12,
author = {Lee Sael and
Daisuke Kihara},
title = {Constructing patch-based ligand-binding pocket database for predicting
function of proteins},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-2}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S2-S7},
doi = {10.1186/1471-2105-13-S2-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SaelK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SamboTCTC12,
author = {Francesco Sambo and
Emanuele Trifoglio and
Barbara Di Camillo and
Gianna Maria Toffolo and
Claudio Cobelli},
title = {Bag of Na{\"{\i}}ve Bayes: biomarker selection and classification
from genome-wide {SNP} data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-14}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S14-S2},
doi = {10.1186/1471-2105-13-S14-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SamboTCTC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SanaviaAMBC12,
author = {Tiziana Sanavia and
Fabio Aiolli and
Giovanni Da San Martino and
Andrea Bisognin and
Barbara Di Camillo},
title = {Improving biomarker list stability by integration of biological knowledge
in the learning process},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S22},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S22},
doi = {10.1186/1471-2105-13-S4-S22},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SanaviaAMBC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Sanchez-LinaresSCG12,
author = {Irene S{\'{a}}nchez{-}Linares and
Horacio Emilio P{\'{e}}rez S{\'{a}}nchez and
Jos{\'{e}} M. Cecilia and
Jos{\'{e}} M. Garc{\'{\i}}a},
title = {High-Throughput parallel blind Virtual Screening using {BINDSURF}},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-14}},
pages = {S13},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S14-S13},
doi = {10.1186/1471-2105-13-S14-S13},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/Sanchez-LinaresSCG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SavardS12,
author = {Olivier Tremblay Savard and
Krister M. Swenson},
title = {A graph-theoretic approach for inparalog detection},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S16},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S16},
doi = {10.1186/1471-2105-13-S19-S16},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SavardS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ScheinBLCPNLF12,
author = {Catherine H. Schein and
David M. Bowen and
Jessica A. Lewis and
Kyung Choi and
Aniko Paul and
Gerbrand J. van der Heden van Noort and
Wenzhe Lu and
Dmitri V. Filippov},
title = {Physicochemical property consensus sequences for functional analysis,
design of multivalent antigens and targeted antivirals},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-13}},
pages = {S9},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S13-S9},
doi = {10.1186/1471-2105-13-S13-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ScheinBLCPNLF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SchonbachTCBTR12,
author = {Christian Sch{\"{o}}nbach and
Sissades Tongsima and
Jonathan H. Chan and
Vladimir Brusic and
Tin Wee Tan and
Shoba Ranganathan},
title = {InCoB2012 Conference: from biological data to knowledge to technological
breakthroughs},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S1},
doi = {10.1186/1471-2105-13-S17-S1},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SchonbachTCBTR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SeahBDY12,
author = {Boon{-}Siew Seah and
Sourav S. Bhowmick and
C. Forbes Dewey Jr. and
Hanry Yu},
title = {{FUSE:} a profit maximization approach for functional summarization
of biological networks},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-3}},
pages = {S10},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S3-S10},
doi = {10.1186/1471-2105-13-S3-S10},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SeahBDY12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SegagniTDZPB12,
author = {Daniele Segagni and
Valentina Tibollo and
Arianna Dagliati and
Alberto Zambelli and
Silvia G. Priori and
Riccardo Bellazzi},
title = {An {ICT} infrastructure to integrate clinical and molecular data in
oncology research},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S5},
doi = {10.1186/1471-2105-13-S4-S5},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SegagniTDZPB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ShaoL12,
author = {Mingfu Shao and
Yu Lin},
title = {Approximating the edit distance for genomes with duplicate genes under
DCJ, insertion and deletion},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S13},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S13},
doi = {10.1186/1471-2105-13-S19-S13},
timestamp = {Tue, 31 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ShaoL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ShihP12,
author = {Yu{-}Keng Shih and
Srinivasan Parthasarathy},
title = {Scalable global alignment for multiple biological networks},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-3}},
pages = {S11},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S3-S11},
doi = {10.1186/1471-2105-13-S3-S11},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ShihP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SilvaMDB12,
author = {Poly H. da Silva and
Raphael Machado and
Simone Dantas and
Mar{\'{\i}}lia D. V. Braga},
title = {Restricted DCJ-indel model: sorting linear genomes with {DCJ} and
indels},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S14},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S14},
doi = {10.1186/1471-2105-13-S19-S14},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SilvaMDB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SkumsDCVRFYZK12,
author = {Pavel Skums and
Zoya Dimitrova and
David S. Campo and
Gilberto Vaughan and
Livia Rossi and
Joseph C. Forbi and
Jonny Yokosawa and
Alex Zelikovsky and
Yuri Khudyakov},
title = {Efficient error correction for next-generation sequencing of viral
amplicons},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S6},
doi = {10.1186/1471-2105-13-S10-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SkumsDCVRFYZK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SmithXSFM12,
author = {Adam M. Smith and
Wen Xu and
Yao Sun and
James R. Faeder and
G. Elisabeta Marai},
title = {RuleBender: integrated modeling, simulation and visualization for
rule-based intracellular biochemistry},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-8}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S8-S3},
doi = {10.1186/1471-2105-13-S8-S3},
timestamp = {Thu, 24 Feb 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SmithXSFM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SoualmiaPMLD12,
author = {Lina Fatima Soualmia and
{\'{E}}lise Prieur{-}Gaston and
Zied Moalla and
Thierry Lecroq and
St{\'{e}}fan Jacques Darmoni},
title = {Matching health information seekers' queries to medical terms},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-14}},
pages = {S11},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S14-S11},
doi = {10.1186/1471-2105-13-S14-S11},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SoualmiaPMLD12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SrihariL12,
author = {Sriganesh Srihari and
Hon Wai Leong},
title = {Temporal dynamics of protein complexes in {PPI} Networks: a case study
using yeast cell cycle dynamics},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S16},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S16},
doi = {10.1186/1471-2105-13-S17-S16},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SrihariL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/StrobeltBBDGMM12,
author = {Hendrik Strobelt and
Enrico Bertini and
Joachim Braun and
Oliver Deussen and
Ulrich Groth and
Thomas U. Mayer and
Dorit Merhof},
title = {HiTSEE {KNIME:} a visualization tool for hit selection and analysis
in high-throughput screening experiments for the {KNIME} platform},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-8}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S8-S4},
doi = {10.1186/1471-2105-13-S8-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/StrobeltBBDGMM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SuCCSH12,
author = {Emily Chia{-}Yu Su and
Jia{-}Ming Chang and
Cheng{-}Wei Cheng and
Ting{-}Yi Sung and
Wen{-}Lian Hsu},
title = {Prediction of nuclear proteins using nuclear translocation signals
proposed by probabilistic latent semantic indexing},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S13},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S13},
doi = {10.1186/1471-2105-13-S17-S13},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SuCCSH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SunALL12,
author = {Yanni Sun and
Osama Aljawad and
Jikai Lei and
Alex Liu},
title = {Genome-scale {NCRNA} homology search using a Hamming distance-based
filtration strategy},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-3}},
pages = {S12},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S3-S12},
doi = {10.1186/1471-2105-13-S3-S12},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SunALL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SunWXZ12,
author = {Jingchun Sun and
Yonghui Wu and
Hua Xu and
Zhongming Zhao},
title = {DTome: a web-based tool for drug-target interactome construction},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-9}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S9-S7},
doi = {10.1186/1471-2105-13-S9-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SunWXZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SundbergCSVWC12,
author = {Kenneth Sundberg and
Mark J. Clement and
Quinn Snell and
Dan Ventura and
Michael Whiting and
Keith A. Crandall},
title = {Phylogenetic search through partial tree mixing},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-13}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S13-S8},
doi = {10.1186/1471-2105-13-S13-S8},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SundbergCSVWC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SveinbjornssonH12,
author = {J{\'{o}}n Sveinbj{\"{o}}rnsson and
Bjarni V. Halld{\'{o}}rsson},
title = {{PAIR:} polymorphic Alu insertion recognition},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-6}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S6-S7},
doi = {10.1186/1471-2105-13-S6-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SveinbjornssonH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SwensonE12,
author = {Krister M. Swenson and
Nadia El{-}Mabrouk},
title = {Gene trees and species trees: irreconcilable differences},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S15},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S15},
doi = {10.1186/1471-2105-13-S19-S15},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SwensonE12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SyRMRCR12,
author = {Mohameth{-}Fran{\c{c}}ois Sy and
Sylvie Ranwez and
Jacky Montmain and
Armelle Regnault and
Michel Crampes and
Vincent Ranwez},
title = {User centered and ontology based information retrieval system for
life sciences},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-1}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S1-S4},
doi = {10.1186/1471-2105-13-S1-S4},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/SyRMRCR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/SzaboovaKZT12,
author = {Andrea Szab{\'{o}}ov{\'{a}} and
Ondrej Kuzelka and
Filip Zelezn{\'{y}} and
Jakub Tolar},
title = {Prediction of DNA-binding propensity of proteins by the ball-histogram
method using automatic template search},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S3},
doi = {10.1186/1471-2105-13-S10-S3},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/SzaboovaKZT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TeoSCSRWT12,
author = {Chian Teo and
Steven R. Shave and
Adam Leow Thean Chor and
Abu Salleh and
Mohd Basyaruddin Abdul Rahman and
Malcolm D. Walkinshaw and
Bimo Ario Tejo},
title = {Discovery of a new class of inhibitors for the protein arginine deiminase
type 4 {(PAD4)} by structure-based virtual screening},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S4},
doi = {10.1186/1471-2105-13-S17-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/TeoSCSRWT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TharatipyakulNWI12,
author = {Atima Tharatipyakul and
Somrak Numnark and
Duangdao Wichadakul and
Supawadee Ingsriswang},
title = {ChemEx: information extraction system for chemical data curation},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S9},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S9},
doi = {10.1186/1471-2105-13-S17-S9},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/TharatipyakulNWI12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/UmetonND12,
author = {Renato Umeton and
Giuseppe Nicosia and
C. Forbes Dewey Jr.},
title = {OREMPdb: a semantic dictionary of computational pathway models},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S6},
doi = {10.1186/1471-2105-13-S4-S6},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/UmetonND12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/UtroCLMP12,
author = {Filippo Utro and
Omar Cornejo and
Donald Livingstone and
Juan Motamayor and
Laxmi Parida},
title = {ARG-based genome-wide analysis of cacao cultivars},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S17},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S17},
doi = {10.1186/1471-2105-13-S19-S17},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/UtroCLMP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VangoneOC12,
author = {Anna Vangone and
Romina Oliva and
Luigi Cavallo},
title = {{CONS-COCOMAPS:} a novel tool to measure and visualize the conservation
of inter-residue contacts in multiple docking solutions},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S19},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S19},
doi = {10.1186/1471-2105-13-S4-S19},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/VangoneOC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VermaM12,
author = {Ruchi Verma and
Ulrich Melcher},
title = {A Support Vector Machine based method to distinguish proteobacterial
proteins from eukaryotic plant proteins},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-15}},
pages = {S9},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S15-S9},
doi = {10.1186/1471-2105-13-S15-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/VermaM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VinekarVG12,
author = {Rithvik Vinekar and
Chandra Verma and
Indira Ghosh},
title = {Functional relevance of dynamic properties of Dimeric NADP-dependent
Isocitrate Dehydrogenases},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S2},
doi = {10.1186/1471-2105-13-S17-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/VinekarVG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ViswanathY12,
author = {Shruthi Viswanath and
Chengyong Yang},
title = {Color call improvement in next generation sequencing using multi-class
support vector machines},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-18}},
pages = {A3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S18-A3},
doi = {10.1186/1471-2105-13-S18-A3},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ViswanathY12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VlachosC12,
author = {Andreas Vlachos and
Mark Craven},
title = {Biomedical event extraction from abstracts and full papers using search-based
structured prediction},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-11}},
pages = {S5},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S11-S5},
doi = {10.1186/1471-2105-13-S11-S5},
timestamp = {Tue, 03 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/VlachosC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/VoggenreiterBG12,
author = {Oliver Voggenreiter and
Stefan Bleuler and
Wilhelm Gruissem},
title = {Exact biclustering algorithm for the analysis of large gene expression
data sets},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-18}},
pages = {A10},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S18-A10},
doi = {10.1186/1471-2105-13-S18-A10},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/VoggenreiterBG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WanZCL12,
author = {Xiaohua Wan and
Fa Zhang and
Qi Chu and
Zhiyong Liu},
title = {High-performance blob-based iterative three-dimensional reconstruction
in electron tomography using multi-GPUs},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S4},
doi = {10.1186/1471-2105-13-S10-S4},
timestamp = {Thu, 19 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WanZCL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangGWL12,
author = {Jingyan Wang and
Xin Gao and
Quanquan Wang and
Yongping Li},
title = {ProDis-ContSHC: learning protein dissimilarity measures and hierarchical
context coherently for protein-protein comparison in protein database
retrieval},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-7}},
pages = {S2},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S7-S2},
doi = {10.1186/1471-2105-13-S7-S2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangGWL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangLC12,
author = {Xuesong Wang and
Lijing Li and
Yuhu Cheng},
title = {An overlapping module identification method in protein-protein interaction
networks},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-7}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S7-S4},
doi = {10.1186/1471-2105-13-S7-S4},
timestamp = {Mon, 28 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WangLC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangLSHLMLWJG12,
author = {Lishi Wang and
Wenli Lu and
Rachel Scheib and
Yue Huang and
Xiaoyun Liu and
Linda Myers and
Lu Lu and
Robert W. Williams and
Yan Jiao and
Weikuan Gu},
title = {QTLs for bone mineral density of femurs and tibias in recombinant
inbred strains derived from {C57BL/6J} and {DBA/2J} inbred strains},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A7},
doi = {10.1186/1471-2105-13-S12-A7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangLSHLMLWJG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangMSSLMC12,
author = {Yingfeng Wang and
Amir Manzour and
Pooya Shareghi and
Timothy I. Shaw and
Ying{-}Wai Li and
Russell L. Malmberg and
Liming Cai},
title = {Stable stem enabled Shannon entropies distinguish non-coding RNAs
from random backgrounds},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-5}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S5-S1},
doi = {10.1186/1471-2105-13-S5-S1},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangMSSLMC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangVM12,
author = {Jeremy R. Wang and
Fernando Pardo{-}Manuel de Villena and
Leonard McMillan},
title = {Comparative analysis and visualization of multiple collinear genomes},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-3}},
pages = {S13},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S3-S13},
doi = {10.1186/1471-2105-13-S3-S13},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WangVM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangXSZ12,
author = {Yin{-}Ying Wang and
Ke{-}Jia Xu and
Jiangning Song and
Xing{-}Ming Zhao},
title = {Exploring drug combinations in genetic interaction network},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-7}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S7-S7},
doi = {10.1186/1471-2105-13-S7-S7},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WangXSZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WeiLWJ12,
author = {Yingying Wei and
Xia Li and
Qianfei Wang and
Hongkai Ji},
title = {iASeq: integrating multiple chip-seq datasets for detecting allele-specific
binding},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-18}},
pages = {A6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S18-A6},
doi = {10.1186/1471-2105-13-S18-A6},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/WeiLWJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WrenDBKBK12,
author = {Jonathan D. Wren and
Mikhail G. Dozmorov and
Dennis Burian and
Rakesh Kaundal and
Susan Bridges and
Doris M. Kupfer},
title = {Proceedings of the 2012 MidSouth computational biology and bioinformatics
society {(MCBIOS)} conference},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-15}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S15-S1},
doi = {10.1186/1471-2105-13-S15-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WrenDBKBK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Wu0SRSPC12,
author = {Xiaogang Wu and
Hui Huang and
Madhankumar Sonachalam and
Sina Reinhard and
Jeffrey Shen and
Ragini Pandey and
Jake Y. Chen},
title = {Reordering based integrative expression profiling for microarray classification},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-2}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S2-S1},
doi = {10.1186/1471-2105-13-S2-S1},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/Wu0SRSPC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WuHHHCM12,
author = {Xiaolong Wu and
Yun Heo and
Izzat El Hajj and
Wen{-}mei W. Hwu and
Deming Chen and
Jian Ma},
title = {{TIGER:} tiled iterative genome assembler},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-19}},
pages = {S18},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S19-S18},
doi = {10.1186/1471-2105-13-S19-S18},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/WuHHHCM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/XiangZH12,
author = {Yang Xiang and
Cun{-}Quan Zhang and
Kun Huang},
title = {Predicting glioblastoma prognosis networks using weighted gene co-expression
network analysis on {TCGA} data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-2}},
pages = {S12},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S2-S12},
doi = {10.1186/1471-2105-13-S2-S12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/XiangZH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YaghoubyZSCDOS12,
author = {Farid Yaghouby and
Ting Zhang and
Martin Striz and
James Crawford and
Kevin D. Donohue and
Bruce F. O'Hara and
Sridhar Sunderam},
title = {Experimental and computational analysis of mouse sleep-wake dynamics},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A21},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A21},
doi = {10.1186/1471-2105-13-S12-A21},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YaghoubyZSCDOS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangCO12,
author = {Lei Yang and
En Cheng and
Z. Meral {\"{O}}zsoyoglu},
title = {Efficient path-based computations on pedigree graphs with compact
encodings},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-3}},
pages = {S14},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S3-S14},
doi = {10.1186/1471-2105-13-S3-S14},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangCO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangHGBCDK12,
author = {Xian Yang and
Rui Han and
Yike Guo and
Jeremy T. Bradley and
Benita Cox and
Robert Dickinson and
Richard Kitney},
title = {Modelling and performance analysis of clinical pathways using the
stochastic process algebra {PEPA}},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-14}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S14-S4},
doi = {10.1186/1471-2105-13-S14-S4},
timestamp = {Thu, 29 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/YangHGBCDK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangNK12,
author = {Youngik Yang and
Kenneth P. Nephew and
Sun Kim},
title = {A novel k-mer mixture logistic regression for methylation susceptibility
modeling of CpG dinucleotides in human gene promoters},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-3}},
pages = {S15},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S3-S15},
doi = {10.1186/1471-2105-13-S3-S15},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangNK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YangS12,
author = {Zhenyu Yang and
David Sankoff},
title = {Generalized adjacency and the conservation of gene clusters in genetic
networks defined by synthetic lethals},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-9}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S9-S8},
doi = {10.1186/1471-2105-13-S9-S8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YangS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YaoWXSYS12,
author = {Dongxia Yao and
Qiang Wei and
Wenying Xu and
Ryan D. Syrenne and
Joshua S. Yuan and
Zhen Su},
title = {Comparative genomic analysis of {NAC} transcriptional factors to dissect
the regulatory mechanisms for cell wall biosynthesis},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-15}},
pages = {S10},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S15-S10},
doi = {10.1186/1471-2105-13-S15-S10},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YaoWXSYS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/YeMCPY12,
author = {Chengxi Ye and
Zhanshan (Sam) Ma and
Charles H. Cannon and
Mihai Pop and
Douglas W. Yu},
title = {Exploiting sparseness in de novo genome assembly},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-6}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S6-S1},
doi = {10.1186/1471-2105-13-S6-S1},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/YeMCPY12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZappaSR12,
author = {Achille Zappa and
Andrea Splendiani and
Paolo Romano},
title = {Towards linked open gene mutations data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S7},
doi = {10.1186/1471-2105-13-S4-S7},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZappaSR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangBWLCW12,
author = {Lifeng Zhang and
Daniel Berleant and
Yi Wang and
Ling Li and
Diane J. Cook and
Eve Syrkin Wurtele},
title = {BirdsEyeView {(BEV):} graphical overviews of experimental data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-15}},
pages = {S11},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S15-S11},
doi = {10.1186/1471-2105-13-S15-S11},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangBWLCW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangC12,
author = {Jiexin Zhang and
Kevin R. Coombes},
title = {Sources of variation in false discovery rate estimation include sample
size, correlation, and inherent differences between groups},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-13}},
pages = {S1},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S13-S1},
doi = {10.1186/1471-2105-13-S13-S1},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangD12,
author = {Fan Zhang and
Renee Drabier},
title = {{IPAD:} the Integrated Pathway Analysis Database for Systematic Enrichment
Analysis},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-15}},
pages = {S7},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S15-S7},
doi = {10.1186/1471-2105-13-S15-S7},
timestamp = {Sun, 06 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangD12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangLDY12,
author = {Yixiang Zhang and
Sanmin Liu and
Susie Y. Dai and
Joshua S. Yuan},
title = {Integration of shot-gun proteomics and bioinformatics analysis to
explore plant hormone responses},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-15}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S15-S8},
doi = {10.1186/1471-2105-13-S15-S8},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangLDY12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangMAPLQC12,
author = {Yuhong Zhang and
Sanchit Misra and
Ankit Agrawal and
Md. Mostofa Ali Patwary and
Wei{-}keng Liao and
Zhiguang Qin and
Alok N. Choudhary},
title = {Accelerating pairwise statistical significance estimation for local
alignment by harvesting GPU's power},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-5}},
pages = {S3},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S5-S3},
doi = {10.1186/1471-2105-13-S5-S3},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangMAPLQC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangS12,
author = {Gaihua Zhang and
Zhen Su},
title = {Inferences from structural comparison: flexibility, secondary structure
wobble and sequence alignment optimization},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-15}},
pages = {S12},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S15-S12},
doi = {10.1186/1471-2105-13-S15-S12},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhangWW12,
author = {Jin Zhang and
Jiayin Wang and
Yufeng Wu},
title = {An improved approach for accurate and efficient calling of structural
variations with low-coverage sequence data},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-6}},
pages = {S6},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S6-S6},
doi = {10.1186/1471-2105-13-S6-S6},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhangWW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhaoMJWHWG12,
author = {Fusheng Zhao and
Yonghui Ma and
Yan Jiao and
Lishi Wang and
Yue Huang and
Wei Wei and
Weikuan Gu},
title = {Identification of hearing loss relevant genes in {QTL} on mouse chromosome
16},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A8},
doi = {10.1186/1471-2105-13-S12-A8},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhaoMJWHWG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhaoWLHL12,
author = {Liang Zhao and
Limsoon Wong and
Lanyuan Lu and
Steven C. H. Hoi and
Jinyan Li},
title = {B-cell epitope prediction through a graph model},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-17}},
pages = {S20},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S17-S20},
doi = {10.1186/1471-2105-13-S17-S20},
timestamp = {Fri, 16 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhaoWLHL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhaoZCS12,
author = {Wenyuan Zhao and
Tieqian Zhao and
Yuanjian Chen and
Yao Sun},
title = {Temporal and spatial relationship of gene expression in the infarcted
rat heart},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A16},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A16},
doi = {10.1186/1471-2105-13-S12-A16},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhaoZCS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhengS12,
author = {Chunfang Zheng and
David Sankoff},
title = {Gene order in rosid phylogeny, inferred from pairwise syntenies among
extant genomes},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S9},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S9},
doi = {10.1186/1471-2105-13-S10-S9},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhengS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZhouGLW12,
author = {Zhan Zhou and
Jianying Gu and
Yong{-}Quan Li and
Yufeng Wang},
title = {Genome plasticity and systems evolution in Streptomyces},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-10}},
pages = {S8},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S10-S8},
doi = {10.1186/1471-2105-13-S10-S8},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZhouGLW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZieglerDEM12,
author = {Uta Ziegler and
Yuanan Diao and
Claus Ernst and
Anthony Montemayor},
title = {Computational investigation of {DNA} packing in confinement},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-12}},
pages = {A22},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S12-A22},
doi = {10.1186/1471-2105-13-S12-A22},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/ZieglerDEM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ZuccaPMAM12,
author = {Susanna Zucca and
Lorenzo Pasotti and
Giuliano Mazzini and
Maria Gabriella Cusella De Angelis and
Paolo Magni},
title = {Characterization of an inducible promoter in different {DNA} copy
number conditions},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-4}},
pages = {S11},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S4-S11},
doi = {10.1186/1471-2105-13-S4-S11},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/ZuccaPMAM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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