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@inproceedings{DBLP:conf/isbra/BadrT11,
author = {Ghada Badr and
Marcel Turcotte},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Component-Based Matching for Multiple Interacting {RNA} Sequences},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {73--86},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_11},
doi = {10.1007/978-3-642-21260-4\_11},
timestamp = {Fri, 21 Aug 2020 17:12:20 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BadrT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChangVKE11,
author = {Wen{-}Chieh Chang and
Sudheer Vakati and
Roland Krause and
Oliver Eulenstein},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Mining Biological Interaction Networks Using Weighted Quasi-Bicliques},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {428--439},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_40},
doi = {10.1007/978-3-642-21260-4\_40},
timestamp = {Sat, 24 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/ChangVKE11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChaudharyBE11,
author = {Ruchi Chaudhary and
J. Gordon Burleigh and
Oliver Eulenstein},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Algorithms for Rapid Error Correction for the Gene Duplication Problem},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {227--239},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_23},
doi = {10.1007/978-3-642-21260-4\_23},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChaudharyBE11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ChaudharyBF11,
author = {Ruchi Chaudhary and
J. Gordon Burleigh and
David Fern{\'{a}}ndez{-}Baca},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Fast Local Search for Unrooted Robinson-Foulds Supertrees},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {184--196},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_20},
doi = {10.1007/978-3-642-21260-4\_20},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ChaudharyBF11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/EblenPRL11,
author = {John D. Eblen and
Charles A. Phillips and
Gary L. Rogers and
Michael A. Langston},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {The Maximum Clique Enumeration Problem: Algorithms, Applications and
Implementations},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {306--319},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_30},
doi = {10.1007/978-3-642-21260-4\_30},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/EblenPRL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/FuPYG11,
author = {Yan Fu and
Rong Pan and
Qiang Yang and
Wen Gao},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Query-Adaptive Ranking with Support Vector Machines for Protein Homology
Prediction},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {320--331},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_31},
doi = {10.1007/978-3-642-21260-4\_31},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/FuPYG11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/FuZ11,
author = {Bin Fu and
Louxin Zhang},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {A Polynomial Algebra Method for Computing Exemplar Breakpoint Distance},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {297--305},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_29},
doi = {10.1007/978-3-642-21260-4\_29},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/FuZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GoreckiE11,
author = {Pawel G{\'{o}}recki and
Oliver Eulenstein},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {A Linear Time Algorithm for Error-Corrected Reconciliation of Unrooted
Gene Trees},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {148--159},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_17},
doi = {10.1007/978-3-642-21260-4\_17},
timestamp = {Fri, 17 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GoreckiE11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GuoW11,
author = {Fei Guo and
Lusheng Wang},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Computing the Protein Binding Sites},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {25--36},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_7},
doi = {10.1007/978-3-642-21260-4\_7},
timestamp = {Tue, 12 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/GuoW11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HasegawaYNIM11,
author = {Takanori Hasegawa and
Rui Yamaguchi and
Masao Nagasaki and
Seiya Imoto and
Satoru Miyano},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Comprehensive Pharmacogenomic Pathway Screening by Data Assimilation},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {160--171},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_18},
doi = {10.1007/978-3-642-21260-4\_18},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HasegawaYNIM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HodgkinsonK11,
author = {Luqman Hodgkinson and
Richard M. Karp},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Algorithms to Detect Multiprotein Modularity Conserved during Evolution},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {111--122},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_14},
doi = {10.1007/978-3-642-21260-4\_14},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HodgkinsonK11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HokszaS11,
author = {David Hoksza and
Daniel Svozil},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {{SETTER} - {RNA} SEcondary sTructure-based TERtiary Structure Similarity
Algorithm},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {37--48},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_8},
doi = {10.1007/978-3-642-21260-4\_8},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HokszaS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/HuBJ11,
author = {Pingzhao Hu and
Shelley B. Bull and
Hui Jiang},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Gene Network Modules-Based Liner Discriminant Analysis of Microarray
Gene Expression Data},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {286--296},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_28},
doi = {10.1007/978-3-642-21260-4\_28},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/HuBJ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/JancuraMPM11,
author = {Pavol Jancura and
Eleftheria Mavridou and
Beatriz Pontes and
Elena Marchiori},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Describing the Orthology Signal in a {PPI} Network at a Functional,
Complex Level},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {209--226},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_22},
doi = {10.1007/978-3-642-21260-4\_22},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/JancuraMPM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/JayEZBPSVCL11,
author = {Jeremy J. Jay and
John D. Eblen and
Yun Zhang and
Mikael Benson and
Andy D. Perkins and
Arnold M. Saxton and
Brynn H. Voy and
Elissa J. Chesler and
Michael A. Langston},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {A Systematic Comparison of Genome Scale Clustering Algorithms - (Extended
Abstract)},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {416--427},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_39},
doi = {10.1007/978-3-642-21260-4\_39},
timestamp = {Mon, 08 Apr 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/JayEZBPSVCL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Jiang11,
author = {Jonathan Q. Jiang},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Multi-label Correlated Semi-supervised Learning for Protein Function
Prediction},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {368--379},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_35},
doi = {10.1007/978-3-642-21260-4\_35},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Jiang11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/KlemaHZT11,
author = {Jir{\'{\i}} Kl{\'{e}}ma and
Matej Holec and
Filip Zelezn{\'{y}} and
Jakub Tolar},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Comparative Evaluation of Set-Level Techniques in Microarray Classification},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {274--285},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_27},
doi = {10.1007/978-3-642-21260-4\_27},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/KlemaHZT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LessaNGBW11,
author = {Felipe Lessa and
Daniele Martins Neto and
K{\'{a}}tia Guimar{\~{a}}es and
Marcelo M. Brigido and
Maria Em{\'{\i}}lia Telles Walter},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Regene: Automatic Construction of a Multiple Component Dirichlet Mixture
Priors Covariance Model to Identify Non-coding {RNA}},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {380--391},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_36},
doi = {10.1007/978-3-642-21260-4\_36},
timestamp = {Tue, 02 Mar 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LessaNGBW11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiHYZ11,
author = {Chaojun Li and
Jieyue He and
Baoliu Ye and
Wei Zhong},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {A Novel Core-Attachment Based Greedy Search Method for Mining Functional
Modules in Protein Interaction Networks},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {332--343},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_32},
doi = {10.1007/978-3-642-21260-4\_32},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiHYZ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiSLRBS11,
author = {Hui Li and
Lauren Scott and
Chunmei Liu and
Mugizi Robert Rwebangira and
Legand Burge and
William M. Southerland},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Rapid and Accurate Generation of Peptide Sequence Tags with a Graph
Search Approach},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {253--261},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_25},
doi = {10.1007/978-3-642-21260-4\_25},
timestamp = {Thu, 31 Oct 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/LiSLRBS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LinBE11,
author = {Harris T. Lin and
J. Gordon Burleigh and
Oliver Eulenstein},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {The Deep Coalescence Consensus Tree Problem is Pareto on Clusters},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {172--183},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_19},
doi = {10.1007/978-3-642-21260-4\_19},
timestamp = {Thu, 15 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LinBE11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LinRM11,
author = {Yu Lin and
Vaibhav Rajan and
Bernard M. E. Moret},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {A Metric for Phylogenetic Trees Based on Matching},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {197--208},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_21},
doi = {10.1007/978-3-642-21260-4\_21},
timestamp = {Tue, 31 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LinRM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/LiuCHT11,
author = {Yu{-}Cheng Liu and
Po{-}I Chiu and
Hsuan{-}Cheng Huang and
Vincent S. Tseng},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Prediction of Essential Genes by Mining Gene Ontology Semantics},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {49--60},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_9},
doi = {10.1007/978-3-642-21260-4\_9},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/LiuCHT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ManuchPG11,
author = {J{\'{a}}n Manuch and
Murray Patterson and
Arvind Gupta},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Towards a Characterisation of the Generalised Cladistic Character
Compatibility Problem for Non-branching Character Trees},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {440--451},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_41},
doi = {10.1007/978-3-642-21260-4\_41},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ManuchPG11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Moret11,
author = {Bernard M. E. Moret},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Phylogenetic Analysis of Whole Genomes - (Keynote Talk)},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {4--7},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_3},
doi = {10.1007/978-3-642-21260-4\_3},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Moret11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/MozhayskiyT11,
author = {Vadim Mozhayskiy and
Ilias Tagkopoulos},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {\emph{In Silico} Evolution of Multi-scale Microbial Systems in the
Presence of Mobile Genetic Elements and Horizontal Gene Transfer},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {262--273},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_26},
doi = {10.1007/978-3-642-21260-4\_26},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/MozhayskiyT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/NicolaeM11,
author = {Marius Nicolae and
Ion I. Mandoiu},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Accurate Estimation of Gene Expression Levels from {DGE} Sequencing
Data},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {392--403},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_37},
doi = {10.1007/978-3-642-21260-4\_37},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/NicolaeM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/RenWLWL11,
author = {Jun Ren and
Jianxin Wang and
Min Li and
Huan Wang and
Binbin Liu},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Prediction of Essential Proteins by Integration of {PPI} Network Topology
and Protein Complexes Information},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {12--24},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_6},
doi = {10.1007/978-3-642-21260-4\_6},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/RenWLWL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Sankoff11,
author = {David Sankoff},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {OMG! Orthologs for Multiple Genomes - Competing Formulations - (Keynote
Talk)},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {2--3},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_2},
doi = {10.1007/978-3-642-21260-4\_2},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Sankoff11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Schwartz11,
author = {Russell Schwartz},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Phylogenetics of Heterogeneous Samples - (Keynote Talk)},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {1},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_1},
doi = {10.1007/978-3-642-21260-4\_1},
timestamp = {Tue, 26 Jun 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Schwartz11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SwensonCPS11,
author = {Krister M. Swenson and
Eric C. H. Chen and
Nicholas D. Pattengale and
David Sankoff},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {The Kernel of Maximum Agreement Subtrees},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {123--135},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_15},
doi = {10.1007/978-3-642-21260-4\_15},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SwensonCPS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/SzaboovaKEZT11,
author = {Andrea Szab{\'{o}}ov{\'{a}} and
Ondrej Kuzelka and
Sergio Morales E. and
Filip Zelezn{\'{y}} and
Jakub Tolar},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Prediction of DNA-Binding Propensity of Proteins by the Ball-Histogram
Method},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {358--367},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_34},
doi = {10.1007/978-3-642-21260-4\_34},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/SzaboovaKEZT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/TangK11,
author = {Yi{-}Tsung Tang and
Hung{-}Yu Kao},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {TransDomain: {A} Transitive Domain-Based Method in Protein-Protein
Interaction Prediction},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {240--252},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_24},
doi = {10.1007/978-3-642-21260-4\_24},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/TangK11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WanZCL11,
author = {Xiaohua Wan and
Fa Zhang and
Qi Chu and
Zhiyong Liu},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {High-Performance Blob-Based Iterative Reconstruction of Electron Tomography
on Multi-GPUs},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {61--72},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_10},
doi = {10.1007/978-3-642-21260-4\_10},
timestamp = {Thu, 19 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/WanZCL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangFBLC11,
author = {Han Wang and
John Fazekas and
Matthew Booth and
Qi Liu and
Dongsheng Che},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {An Integrative Approach for Genomic Island Prediction in Prokaryotic
Genomes},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {404--415},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_38},
doi = {10.1007/978-3-642-21260-4\_38},
timestamp = {Wed, 18 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WangFBLC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/WangLWP11,
author = {Huan Wang and
Min Li and
Jianxin Wang and
Yi Pan},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {A New Method for Identifying Essential Proteins Based on Edge Clustering
Coefficient},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {87--98},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_12},
doi = {10.1007/978-3-642-21260-4\_12},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/WangLWP11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Wei11,
author = {Liping Wei},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Genetic and Pharmacogenetic Studies of Neuropsychiatric Disorders:
Increasingly Critical Roles of Bioinformatics Research and Applications
- (Keynote Talk)},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {8--10},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_4},
doi = {10.1007/978-3-642-21260-4\_4},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Wei11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/Xing11,
author = {Eric P. Xing},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Genome-Phenome Association Analysis of Complex Diseases a Structured
Sparse Regression Approach - (Keynote Talk)},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {11},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_5},
doi = {10.1007/978-3-642-21260-4\_5},
timestamp = {Tue, 26 Jun 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/Xing11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/YangC11,
author = {Jianyi Yang and
Xin Chen},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {A Consensus Approach to Predicting Protein Contact Map via Logistic
Regression},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {136--147},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_16},
doi = {10.1007/978-3-642-21260-4\_16},
timestamp = {Mon, 25 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbra/YangC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhangM11,
author = {Xiuwei Zhang and
Bernard M. E. Moret},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {ProPhyC: {A} Probabilistic Phylogenetic Model for Refining Regulatory
Networks},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {344--357},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_33},
doi = {10.1007/978-3-642-21260-4\_33},
timestamp = {Sun, 04 Jun 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhangM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZhengS11,
author = {Chunfang Zheng and
David Sankoff},
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Gene Order in Rosid Phylogeny, Inferred from Pairwise Syntenies among
Extant Genomes},
booktitle = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
pages = {99--110},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4\_13},
doi = {10.1007/978-3-642-21260-4\_13},
timestamp = {Thu, 25 May 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZhengS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/isbra/2011,
editor = {Jianer Chen and
Jianxin Wang and
Alexander Zelikovsky},
title = {Bioinformatics Research and Applications - 7th International Symposium,
{ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6674},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21260-4},
doi = {10.1007/978-3-642-21260-4},
isbn = {978-3-642-21259-8},
timestamp = {Fri, 21 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/2011.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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