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@inproceedings{DBLP:conf/cmsb/ArgyrisLTTV22, author = {Georgios Argyris and Alberto Lluch{-}Lafuente and Mirco Tribastone and Max Tschaikowski and Andrea Vandin}, editor = {Ion Petre and Andrei Paun}, title = {An Extension of {ERODE} to Reduce Boolean Networks By Backward Boolean Equivalence}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {294--301}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_16}, doi = {10.1007/978-3-031-15034-0\_16}, timestamp = {Thu, 25 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/ArgyrisLTTV22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/BraichenkoGS22, author = {Svitlana Braichenko and Ramon Grima and Guido Sanguinetti}, editor = {Ion Petre and Andrei Paun}, title = {Bayesian Learning of Effective Chemical Master Equations in Crowded Intracellular Conditions}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {239--258}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_12}, doi = {10.1007/978-3-031-15034-0\_12}, timestamp = {Thu, 25 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/BraichenkoGS22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/CravoFNP22, author = {Fabricio Cravo and Matthias F{\"{u}}gger and Thomas Nowak and Gayathri Prakash}, editor = {Ion Petre and Andrei Paun}, title = {MobsPy: {A} Meta-species Language for Chemical Reaction Networks}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {277--285}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_14}, doi = {10.1007/978-3-031-15034-0\_14}, timestamp = {Mon, 22 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/CravoFNP22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/DesoeuvresSR22, author = {Aur{\'{e}}lien Desoeuvres and Peter Szmolyan and Ovidiu Radulescu}, editor = {Ion Petre and Andrei Paun}, title = {Qualitative Dynamics of Chemical Reaction Networks: An Investigation Using Partial Tropical Equilibrations}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {61--85}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_4}, doi = {10.1007/978-3-031-15034-0\_4}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/cmsb/DesoeuvresSR22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/GreugnySF22, author = {El{\'{e}}a Thibault Greugny and Georgios N. Stamatas and Fran{\c{c}}ois Fages}, editor = {Ion Petre and Andrei Paun}, title = {Stability Versus Meta-stability in a Skin Microbiome Model}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {179--197}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_9}, doi = {10.1007/978-3-031-15034-0\_9}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/GreugnySF22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/HelfrichCKM22, author = {Martin Helfrich and Milan Ceska and Jan Kret{\'{\i}}nsk{\'{y}} and Stefan Marticek}, editor = {Ion Petre and Andrei Paun}, title = {Abstraction-Based Segmental Simulation of Chemical Reaction Networks}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {41--60}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_3}, doi = {10.1007/978-3-031-15034-0\_3}, timestamp = {Sat, 10 Sep 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/HelfrichCKM22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/HemeryF22, author = {Mathieu Hemery and Fran{\c{c}}ois Fages}, editor = {Ion Petre and Andrei Paun}, title = {Algebraic Biochemistry: {A} Framework for Analog Online Computation in Cells}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {3--20}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_1}, doi = {10.1007/978-3-031-15034-0\_1}, timestamp = {Mon, 22 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/HemeryF22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/Jimenez-PastorJ22, author = {Antonio Jim{\'{e}}nez{-}Pastor and Joshua Paul Jacob and Gleb Pogudin}, editor = {Ion Petre and Andrei Paun}, title = {Exact Linear Reduction for Rational Dynamical Systems}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {198--216}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_10}, doi = {10.1007/978-3-031-15034-0\_10}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/cmsb/Jimenez-PastorJ22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/LaitinenL22, author = {Ville Laitinen and Leo Lahti}, editor = {Ion Petre and Andrei Paun}, title = {Probabilistic Multivariate Early Warning Signals}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {259--274}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_13}, doi = {10.1007/978-3-031-15034-0\_13}, timestamp = {Thu, 25 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/LaitinenL22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/NiehrenVV22, author = {Joachim Niehren and Ath{\'{e}}na{\"{\i}}s Vaginay and Cristian Versari}, editor = {Ion Petre and Andrei Paun}, title = {Abstract Simulation of Reaction Networks via Boolean Networks}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {21--40}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_2}, doi = {10.1007/978-3-031-15034-0\_2}, timestamp = {Sat, 10 Sep 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/NiehrenVV22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/Pastva22, author = {Samuel Pastva}, editor = {Ion Petre and Andrei Paun}, title = {Variable Stabilisation in Boolean Monotonic Model Pools}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {122--137}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_6}, doi = {10.1007/978-3-031-15034-0\_6}, timestamp = {Mon, 22 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/Pastva22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/RedaD22, author = {Cl{\'{e}}mence R{\'{e}}da and Andr{\'{e}}e Delahaye{-}Duriez}, editor = {Ion Petre and Andrei Paun}, title = {Prioritization of Candidate Genes Through Boolean Networks}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {89--121}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_5}, doi = {10.1007/978-3-031-15034-0\_5}, timestamp = {Thu, 25 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/RedaD22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/RoncalliP22, author = {Th{\'{e}}o Roncalli and Lo{\"{\i}}c Paulev{\'{e}}}, editor = {Ion Petre and Andrei Paun}, title = {Variable-Depth Simulation of Most Permissive Boolean Networks}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {138--157}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_7}, doi = {10.1007/978-3-031-15034-0\_7}, timestamp = {Thu, 25 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/RoncalliP22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/SunFM22, author = {Honglu Sun and Maxime Folschette and Morgan Magnin}, editor = {Ion Petre and Andrei Paun}, title = {Limit Cycle Analysis of a Class of Hybrid Gene Regulatory Networks}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {217--236}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_11}, doi = {10.1007/978-3-031-15034-0\_11}, timestamp = {Thu, 25 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/SunFM22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/TrinhBHS22, author = {Van{-}Giang Trinh and Belaid Benhamou and Kunihiko Hiraishi and Sylvain Soliman}, editor = {Ion Petre and Andrei Paun}, title = {Minimal Trap Spaces of Logical Models are Maximal Siphons of Their Petri Net Encoding}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {158--176}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_8}, doi = {10.1007/978-3-031-15034-0\_8}, timestamp = {Thu, 25 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/TrinhBHS22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/TrojakSBB22, author = {Matej Troj{\'{a}}k and David Safr{\'{a}}nek and Branislav Brozmann and Lubos Brim}, editor = {Ion Petre and Andrei Paun}, title = {eBCSgen 2.0: Modelling and Analysis of Regulated Rule-Based Systems}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {302--309}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_17}, doi = {10.1007/978-3-031-15034-0\_17}, timestamp = {Mon, 22 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/TrojakSBB22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/cmsb/WiederandersMZ22, author = {Hanna Josephine Wiederanders and Anne{-}Lena Moor and Christoph Zechner}, editor = {Ion Petre and Andrei Paun}, title = {Automated Generation of Conditional Moment Equations for Stochastic Reaction Networks}, booktitle = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, pages = {286--293}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0\_15}, doi = {10.1007/978-3-031-15034-0\_15}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/WiederandersMZ22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/cmsb/2022, editor = {Ion Petre and Andrei Paun}, title = {Computational Methods in Systems Biology - 20th International Conference, {CMSB} 2022, Bucharest, Romania, September 14-16, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13447}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-15034-0}, doi = {10.1007/978-3-031-15034-0}, isbn = {978-3-031-15033-3}, timestamp = {Mon, 22 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/cmsb/2022.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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