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@article{DBLP:journals/ejbsb/DridiGGTHCGDLGR17,
author = {Noura Dridi and
Audrey Giremus and
Jean{-}Fran{\c{c}}ois Giovannelli and
Caroline Truntzer and
Melita Hadzagic and
Jean{-}Philippe Charrier and
Laurent Gerfault and
Patrick Ducoroy and
Bruno Lacroix and
Pierre Grangeat and
Pascal Roy},
title = {Bayesian inference for biomarker discovery in proteomics: an analytic
solution},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2017},
pages = {9},
year = {2017},
url = {https://doi.org/10.1186/s13637-017-0062-4},
doi = {10.1186/S13637-017-0062-4},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/DridiGGTHCGDLGR17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/HuangZWLS17,
author = {Thomas S. Huang and
Jiayu Zhou and
Zhangyang Wang and
Qing Ling and
Yang Shen},
title = {Biomedical informatics with optimization and machine learning},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2017},
pages = {4},
year = {2017},
url = {https://doi.org/10.1186/s13637-017-0058-0},
doi = {10.1186/S13637-017-0058-0},
timestamp = {Fri, 01 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/HuangZWLS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/LiOQD17,
author = {Xiangfang Li and
Oluwaseyi Omotere and
Lijun Qian and
Edward R. Dougherty},
title = {Review of stochastic hybrid systems with applications in biological
systems modeling and analysis},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2017},
pages = {8},
year = {2017},
url = {https://doi.org/10.1186/s13637-017-0061-5},
doi = {10.1186/S13637-017-0061-5},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/LiOQD17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/LouisAHH17,
author = {Wael Louis and
Shahad Abdulnour and
Sahar Javaher Haghighi and
Dimitrios Hatzinakos},
title = {On biometric systems: electrocardiogram Gaussianity and data synthesis},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2017},
pages = {5},
year = {2017},
url = {https://doi.org/10.1186/s13637-017-0056-2},
doi = {10.1186/S13637-017-0056-2},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/LouisAHH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/MurugesanABN17,
author = {Gurusamy Murugesan and
Sabenabanu Abdulkadhar and
Balu Bhasuran and
Jeyakumar Natarajan},
title = {{BCC-NER:} bidirectional, contextual clues named entity tagger for
gene/protein mention recognition},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2017},
pages = {7},
year = {2017},
url = {https://doi.org/10.1186/s13637-017-0060-6},
doi = {10.1186/S13637-017-0060-6},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/MurugesanABN17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/NikolayPKT17,
author = {Fabio Nikolay and
Marius Pesavento and
George Kritikos and
Nassos Typas},
title = {Learning directed acyclic graphs from large-scale genomics data},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2017},
pages = {10},
year = {2017},
url = {https://doi.org/10.1186/s13637-017-0063-3},
doi = {10.1186/S13637-017-0063-3},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/NikolayPKT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/OgundijoEW17,
author = {Oyetunji E. Ogundijo and
Abdulkadir Elmas and
Xiaodong Wang},
title = {Reverse engineering gene regulatory networks from measurement with
missing values},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2017},
pages = {2},
year = {2017},
url = {https://doi.org/10.1186/s13637-016-0055-8},
doi = {10.1186/S13637-016-0055-8},
timestamp = {Thu, 24 Feb 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/OgundijoEW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/Sinha17,
author = {Shriprakash Sinha},
title = {A pedagogical walkthrough of computational modeling and simulation
of Wnt signaling pathway using static causal models in {MATLAB}},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2017},
pages = {1},
year = {2017},
url = {https://doi.org/10.1186/s13637-016-0044-y},
doi = {10.1186/S13637-016-0044-Y},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/Sinha17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/VellaZMMS17,
author = {Danila Vella and
Italo Zoppis and
Giancarlo Mauri and
Pierluigi Mauri and
Dario Silvestre},
title = {From protein-protein interactions to protein co-expression networks:
a new perspective to evaluate large-scale proteomic data},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2017},
pages = {6},
year = {2017},
url = {https://doi.org/10.1186/s13637-017-0059-z},
doi = {10.1186/S13637-017-0059-Z},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/VellaZMMS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/YuanHSL17,
author = {Jianbo Yuan and
Chester Holtz and
Tristram H. Smith and
Jiebo Luo},
title = {Autism spectrum disorder detection from semi-structured and unstructured
medical data},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2017},
pages = {3},
year = {2017},
url = {https://doi.org/10.1186/s13637-017-0057-1},
doi = {10.1186/S13637-017-0057-1},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/YuanHSL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/AkbariHNC16,
author = {Mohammad Akbari and
Xia Hu and
Liqiang Nie and
Tat{-}Seng Chua},
title = {Towards organizing health knowledge on community-based health services},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {18},
year = {2016},
url = {https://doi.org/10.1186/s13637-016-0053-x},
doi = {10.1186/S13637-016-0053-X},
timestamp = {Sun, 28 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/AkbariHNC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/AndreiA16,
author = {Victor Andrei and
Ognjen Arandjelovic},
title = {Complex temporal topic evolution modelling using the Kullback-Leibler
divergence and the Bhattacharyya distance},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {16},
year = {2016},
url = {https://doi.org/10.1186/s13637-016-0050-0},
doi = {10.1186/S13637-016-0050-0},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/AndreiA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/BaytasLWJZ16,
author = {Inci M. Baytas and
Kaixiang Lin and
Fei Wang and
Anil K. Jain and
Jiayu Zhou},
title = {Stochastic convex sparse principal component analysis},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {15},
year = {2016},
url = {https://doi.org/10.1186/s13637-016-0045-x},
doi = {10.1186/S13637-016-0045-X},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/BaytasLWJZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/ChenN16,
author = {Ting Chen and
Ulisses M. Braga{-}Neto},
title = {Bayesian estimation of the discrete coefficient of determination},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {1},
year = {2016},
url = {https://doi.org/10.1186/s13637-015-0035-4},
doi = {10.1186/S13637-015-0035-4},
timestamp = {Fri, 24 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/ChenN16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/DadanehQ16,
author = {Siamak Zamani Dadaneh and
Xiaoning Qian},
title = {Bayesian module identification from multiple noisy networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {5},
year = {2016},
url = {https://doi.org/10.1186/s13637-016-0038-9},
doi = {10.1186/S13637-016-0038-9},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/DadanehQ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/DuLW16,
author = {Tianchuan Du and
Li Liao and
Cathy H. Wu},
title = {Enhancing interacting residue prediction with integrated contact matrix
prediction in protein-protein interaction},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {17},
year = {2016},
url = {https://doi.org/10.1186/s13637-016-0051-z},
doi = {10.1186/S13637-016-0051-Z},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/DuLW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/DumitruMS16,
author = {Mircea Dumitru and
Ali Mohammad{-}Djafari and
Simona Baghai Sain},
title = {Precise periodic components estimation for chronobiological signals
through Bayesian Inference with sparsity enforcing prior},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {3},
year = {2016},
url = {https://doi.org/10.1186/s13637-015-0033-6},
doi = {10.1186/S13637-015-0033-6},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/DumitruMS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/GiroldiniPBMT16,
author = {William Giroldini and
Luciano Pederzoli and
Marco Bilucaglia and
Simone Melloni and
Patrizio Tressoldi},
title = {A new method to detect event-related potentials based on Pearson's
correlation},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {11},
year = {2016},
url = {https://doi.org/10.1186/s13637-016-0043-z},
doi = {10.1186/S13637-016-0043-Z},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/GiroldiniPBMT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/HuRSLALM16,
author = {Xia Hu and
Peter D. Reaven and
Aramesh Saremi and
Ninghao Liu and
Mohammad Ali Abbasi and
Huan Liu and
Raymond Q. Migrino},
title = {Machine learning to predict rapid progression of carotid atherosclerosis
in patients with impaired glucose tolerance},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {14},
year = {2016},
url = {https://doi.org/10.1186/s13637-016-0049-6},
doi = {10.1186/S13637-016-0049-6},
timestamp = {Sun, 28 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/HuRSLALM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/HuangLW16,
author = {Lei Huang and
Li Liao and
Cathy H. Wu},
title = {Inference of protein-protein interaction networks from multiple heterogeneous
data},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {8},
year = {2016},
url = {https://doi.org/10.1186/s13637-016-0040-2},
doi = {10.1186/S13637-016-0040-2},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/HuangLW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/JinSZH16,
author = {Yan Jin and
Yi Su and
Xiao{-}Hua Zhou and
Shuai Huang},
title = {Heterogeneous multimodal biomarkers analysis for Alzheimer's disease
via Bayesian network},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {12},
year = {2016},
url = {https://doi.org/10.1186/s13637-016-0046-9},
doi = {10.1186/S13637-016-0046-9},
timestamp = {Sun, 27 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/JinSZH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/KamatukaHS16,
author = {Kenta Kamatuka and
Masahiro Hattori and
Tomoyasu Sugiyama},
title = {shRNA target prediction informed by comprehensive enquiry {(SPICE):}
a supporting system for high-throughput screening of shRNA library},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {7},
year = {2016},
url = {https://doi.org/10.1186/s13637-016-0039-8},
doi = {10.1186/S13637-016-0039-8},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/KamatukaHS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/NigatuHSM16,
author = {Dawit Nigatu and
Werner Henkel and
Patrick Sobetzko and
Georgi Muskhelishvili},
title = {Relationship between digital information and thermodynamic stability
in bacterial genomes},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {4},
year = {2016},
url = {https://doi.org/10.1186/s13637-016-0037-x},
doi = {10.1186/S13637-016-0037-X},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/NigatuHSM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SalamaHM16,
author = {Mostafa A. Salama and
Aboul Ella Hassanien and
Ahmad Mostafa},
title = {The prediction of virus mutation using neural networks and rough set
techniques},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {10},
year = {2016},
url = {https://doi.org/10.1186/s13637-016-0042-0},
doi = {10.1186/S13637-016-0042-0},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/SalamaHM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SolvangFKRLBKA16,
author = {Hiroko K. Solvang and
Arnoldo Frigessi and
Fateme Kaveh and
Margit L. H. Riis and
Torben L{\"{u}}ders and
Ida R. K. Bukholm and
Vessela N. Kristensen and
Bettina K. Andreassen},
title = {Gene expression analysis supports tumor threshold over 2.0 cm for
T-category breast cancer},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {6},
year = {2016},
url = {https://doi.org/10.1186/s13637-015-0034-5},
doi = {10.1186/S13637-015-0034-5},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/SolvangFKRLBKA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SulaimanovK16,
author = {Nurgazy Sulaimanov and
Heinz Koeppl},
title = {Graph reconstruction using covariance-based methods},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {19},
year = {2016},
url = {https://doi.org/10.1186/s13637-016-0052-y},
doi = {10.1186/S13637-016-0052-Y},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/SulaimanovK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/WangL16,
author = {Kuan Wang and
Jiebo Luo},
title = {Detecting Visually Observable Disease Symptoms from Faces},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {13},
year = {2016},
url = {https://doi.org/10.1186/s13637-016-0048-7},
doi = {10.1186/S13637-016-0048-7},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/WangL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/WangQ16,
author = {Yijie Wang and
Xiaoning Qian},
title = {Stochastic block coordinate Frank-Wolfe algorithm for large-scale
biological network alignment},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {9},
year = {2016},
url = {https://doi.org/10.1186/s13637-016-0041-1},
doi = {10.1186/S13637-016-0041-1},
timestamp = {Mon, 01 Mar 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/WangQ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/ZollanvariD16,
author = {Amin Zollanvari and
Edward R. Dougherty},
title = {Incorporating prior knowledge induced from stochastic differential
equations in the classification of stochastic observations},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2016},
pages = {2},
year = {2016},
url = {https://doi.org/10.1186/s13637-016-0036-y},
doi = {10.1186/S13637-016-0036-Y},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/ZollanvariD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/AcharyaRZ15,
author = {Lipi R. Acharya and
Robert G. Reynolds and
Dongxiao Zhu},
title = {Network inference through synergistic subnetwork evolution},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2015},
pages = {12},
year = {2015},
url = {https://doi.org/10.1186/s13637-015-0027-4},
doi = {10.1186/S13637-015-0027-4},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/AcharyaRZ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/AyatiECK15,
author = {Marzieh Ayati and
Sinan Erten and
Mark R. Chance and
Mehmet Koyut{\"{u}}rk},
title = {{MOBAS:} identification of disease-associated protein subnetworks
using modularity-based scoring},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2015},
pages = {7},
year = {2015},
url = {https://doi.org/10.1186/s13637-015-0025-6},
doi = {10.1186/S13637-015-0025-6},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/AyatiECK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/DaltonY15,
author = {Lori A. Dalton and
Mohammadmahdi R. Yousefi},
title = {On optimal Bayesian classification and risk estimation under multiple
classes},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2015},
pages = {8},
year = {2015},
url = {https://doi.org/10.1186/s13637-015-0028-3},
doi = {10.1186/S13637-015-0028-3},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/DaltonY15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/Davydyan15,
author = {Garri Davydyan},
title = {Carcinogenesis: alterations in reciprocal interactions of normal functional
structure of biologic systems},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2015},
pages = {11},
year = {2015},
url = {https://doi.org/10.1186/s13637-015-0030-9},
doi = {10.1186/S13637-015-0030-9},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/Davydyan15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/FaisalMCM15,
author = {Fazle Elahi Faisal and
Lei Meng and
Joseph Crawford and
Tijana Milenkovic},
title = {The post-genomic era of biological network alignment},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2015},
pages = {3},
year = {2015},
url = {https://doi.org/10.1186/s13637-015-0022-9},
doi = {10.1186/S13637-015-0022-9},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/FaisalMCM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/GabrRGK15,
author = {Haitham Gabr and
Juan Carlos Rivera{-}Mulia and
David M. Gilbert and
Tamer Kahveci},
title = {Computing interaction probabilities in signaling networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2015},
pages = {10},
year = {2015},
url = {https://doi.org/10.1186/s13637-015-0031-8},
doi = {10.1186/S13637-015-0031-8},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/GabrRGK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/GanguliCCS15,
author = {Piyali Ganguli and
Saikat Chowdhury and
Shomeek Chowdhury and
Ram Rup Sarkar},
title = {Identification of Th1/Th2 regulatory switch to promote healing response
during leishmaniasis: a computational approach},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2015},
pages = {13},
year = {2015},
url = {https://doi.org/10.1186/s13637-015-0032-7},
doi = {10.1186/S13637-015-0032-7},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/GanguliCCS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/GuzziMTTC15,
author = {Pietro Hiram Guzzi and
Maria Teresa Di Martino and
Pierosandro Tagliaferri and
Pierfrancesco Tassone and
Mario Cannataro},
title = {Analysis of miRNA, mRNA, and {TF} interactions through network-based
methods},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2015},
pages = {4},
year = {2015},
url = {https://doi.org/10.1186/s13637-015-0023-8},
doi = {10.1186/S13637-015-0023-8},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/GuzziMTTC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/HouSC15,
author = {Jie Hou and
Gary Stacey and
Jianlin Cheng},
title = {Exploring soybean metabolic pathways based on probabilistic graphical
model and knowledge-based methods},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2015},
pages = {5},
year = {2015},
url = {https://doi.org/10.1186/s13637-015-0026-5},
doi = {10.1186/S13637-015-0026-5},
timestamp = {Tue, 27 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/HouSC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/KhuwajaHH15,
author = {Gulzar A. Khuwaja and
Sahar Javaher Haghighi and
Dimitrios Hatzinakos},
title = {40-Hz {ASSR} fusion classification system for observing sleep patterns},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2015},
pages = {2},
year = {2015},
url = {https://doi.org/10.1186/s13637-014-0021-2},
doi = {10.1186/S13637-014-0021-2},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/KhuwajaHH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/LarjoL15,
author = {Antti Larjo and
Harri L{\"{a}}hdesm{\"{a}}ki},
title = {Using multi-step proposal distribution for improved {MCMC} convergence
in Bayesian network structure learning},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2015},
pages = {6},
year = {2015},
url = {https://doi.org/10.1186/s13637-015-0024-7},
doi = {10.1186/S13637-015-0024-7},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/LarjoL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/MurrugarraD15,
author = {David Murrugarra and
Elena S. Dimitrova},
title = {Molecular network control through boolean canalization},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2015},
pages = {9},
year = {2015},
url = {https://doi.org/10.1186/s13637-015-0029-2},
doi = {10.1186/S13637-015-0029-2},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/MurrugarraD15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/YousefiD15,
author = {Mohammadmahdi R. Yousefi and
Lori A. Dalton},
title = {Optimal cancer prognosis under network uncertainty},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2015},
pages = {1},
year = {2015},
url = {https://doi.org/10.1186/s13637-014-0020-3},
doi = {10.1186/S13637-014-0020-3},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/YousefiD15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/Atashpaz-Gargari14,
author = {Esmaeil Atashpaz{-}Gargari and
Ulisses M. Braga{-}Neto and
Edward R. Dougherty},
title = {Modeling and systematic analysis of biomarker validation using selected
reaction monitoring},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {17},
year = {2014},
url = {https://doi.org/10.1186/s13637-014-0017-y},
doi = {10.1186/S13637-014-0017-Y},
timestamp = {Fri, 24 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/Atashpaz-Gargari14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/BerlowDKP14,
author = {Noah Berlow and
Lara E. Davis and
Charles Keller and
Ranadip Pal},
title = {Inference of dynamic biological networks based on responses to drug
perturbations},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {14},
year = {2014},
url = {https://doi.org/10.1186/s13637-014-0014-1},
doi = {10.1186/S13637-014-0014-1},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/BerlowDKP14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/FangOSDL14,
author = {Jie Fang and
Hongjia Ouyang and
Liangzhong Shen and
Edward R. Dougherty and
Wenbin Liu},
title = {Using the minimum description length principle to reduce the rate
of false positives of best-fit algorithms},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {13},
year = {2014},
url = {https://doi.org/10.1186/s13637-014-0013-2},
doi = {10.1186/S13637-014-0013-2},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/FangOSDL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/IliadisAW14,
author = {Alexandros Iliadis and
Dimitris Anastassiou and
Xiaodong Wang},
title = {A sequential Monte Carlo framework for haplotype inference in {CNV/SNP}
genotype data},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {7},
year = {2014},
url = {https://doi.org/10.1186/1687-4153-2014-7},
doi = {10.1186/1687-4153-2014-7},
timestamp = {Thu, 24 Feb 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/IliadisAW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/JiaW14,
author = {Bin Jia and
Xiaodong Wang},
title = {Regularized {EM} algorithm for sparse parameter estimation in nonlinear
dynamic systems with application to gene regulatory network inference},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {5},
year = {2014},
url = {https://doi.org/10.1186/1687-4153-2014-5},
doi = {10.1186/1687-4153-2014-5},
timestamp = {Thu, 24 Feb 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/JiaW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/KhanBF14,
author = {Jehandad Khan and
Nidhal Bouaynaya and
Hassan M. Fathallah{-}Shaykh},
title = {Tracking of time-varying genomic regulatory networks with a LASSO-Kalman
smoother},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {3},
year = {2014},
url = {https://doi.org/10.1186/1687-4153-2014-3},
doi = {10.1186/1687-4153-2014-3},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/KhanBF14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/KhunlertgitY14,
author = {Navadon Khunlertgit and
Byung{-}Jun Yoon},
title = {Simultaneous identification of robust synergistic subnetwork markers
for effective cancer prognosis},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {19},
year = {2014},
url = {https://doi.org/10.1186/s13637-014-0019-9},
doi = {10.1186/S13637-014-0019-9},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/KhunlertgitY14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/KingATW14,
author = {Brian R. King and
Maurice Aburdene and
Alex Thompson and
Zach Warres},
title = {Application of discrete Fourier inter-coefficient difference for assessing
genetic sequence similarity},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {8},
year = {2014},
url = {https://doi.org/10.1186/1687-4153-2014-8},
doi = {10.1186/1687-4153-2014-8},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/KingATW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/LiGLPWZ14,
author = {Peng Li and
Ping Gong and
Haoni Li and
Edward J. Perkins and
Nan Wang and
Chaoyang Zhang},
title = {Gene regulatory network inference and validation using relative change
ratio analysis and time-delayed dynamic Bayesian network},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {12},
year = {2014},
url = {https://doi.org/10.1186/s13637-014-0012-3},
doi = {10.1186/S13637-014-0012-3},
timestamp = {Tue, 24 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/LiGLPWZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/LiR14,
author = {Genyuan Li and
Herschel A. Rabitz},
title = {Analysis of gene network robustness based on saturated fixed point
attractors},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {4},
year = {2014},
url = {https://doi.org/10.1186/1687-4153-2014-4},
doi = {10.1186/1687-4153-2014-4},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/LiR14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/MessaoudiOL14,
author = {Imen Messaoudi and
Afef Elloumi Oueslati and
Zied Lachiri},
title = {Wavelet analysis of frequency chaos game signal: a time-frequency
signature of the C. elegans {DNA}},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {16},
year = {2014},
url = {https://doi.org/10.1186/s13637-014-0016-z},
doi = {10.1186/S13637-014-0016-Z},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/MessaoudiOL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/NakayamaNIAI14,
author = {Minoru Nakayama and
Wioletta Nowak and
Hitoshi Ishikawa and
Ken Asakawa and
Yoshiaki Ichibe},
title = {Discovering irregular pupil light responses to chromatic stimuli using
waveform shapes of pupillograms},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {18},
year = {2014},
url = {https://doi.org/10.1186/s13637-014-0018-x},
doi = {10.1186/S13637-014-0018-X},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/NakayamaNIAI14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/OuyangFSDL14,
author = {Hongjia Ouyang and
Jie Fang and
Liangzhong Shen and
Edward R. Dougherty and
Wenbin Liu},
title = {Learning restricted Boolean network model by time-series data},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {10},
year = {2014},
url = {https://doi.org/10.1186/s13637-014-0010-5},
doi = {10.1186/S13637-014-0010-5},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/OuyangFSDL14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/RoyB14,
author = {Manidipa Roy and
Soma Barman},
title = {Effective gene prediction by high resolution frequency estimator based
on least-norm solution technique},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {2},
year = {2014},
url = {https://doi.org/10.1186/1687-4153-2014-2},
doi = {10.1186/1687-4153-2014-2},
timestamp = {Mon, 08 Mar 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/RoyB14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/VerdicchioK14,
author = {Michael P. Verdicchio and
Seungchan Kim},
title = {Template-based intervention in Boolean network models of biological
systems},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {11},
year = {2014},
url = {https://doi.org/10.1186/s13637-014-0011-4},
doi = {10.1186/S13637-014-0011-4},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/VerdicchioK14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/VuSBD14,
author = {Thang T. Vu and
Chao Sima and
Ulisses M. Braga{-}Neto and
Edward R. Dougherty},
title = {Unbiased bootstrap error estimation for linear discriminant analysis},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {15},
year = {2014},
url = {https://doi.org/10.1186/s13637-014-0015-0},
doi = {10.1186/S13637-014-0015-0},
timestamp = {Fri, 24 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/VuSBD14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/YousefiD14,
author = {Mohammadmahdi R. Yousefi and
Edward R. Dougherty},
title = {A comparison study of optimal and suboptimal intervention policies
for gene regulatory networks in the presence of uncertainty},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {6},
year = {2014},
url = {https://doi.org/10.1186/1687-4153-2014-6},
doi = {10.1186/1687-4153-2014-6},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/YousefiD14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/ZouWW14,
author = {Sai Zou and
Lei Wang and
Junfeng Wang},
title = {A 2D graphical representation of the sequences of {DNA} based on triplets
and its application},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2014},
pages = {1},
year = {2014},
url = {https://doi.org/10.1186/1687-4153-2014-1},
doi = {10.1186/1687-4153-2014-1},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/ZouWW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/AdlQXVK13,
author = {Amin Ahmadi Adl and
Xiaoning Qian and
Ping Xu and
Kendra Vehik and
Jeffrey P. Krischer},
title = {Feature ranking based on synergy networks to identify prognostic markers
in {DPT-1}},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2013},
pages = {12},
year = {2013},
url = {https://doi.org/10.1186/1687-4153-2013-12},
doi = {10.1186/1687-4153-2013-12},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/AdlQXVK13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/Dougherty13,
author = {Edward R. Dougherty},
title = {On the impoverishment of scientific education},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2013},
pages = {15},
year = {2013},
url = {https://doi.org/10.1186/1687-4153-2013-15},
doi = {10.1186/1687-4153-2013-15},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/Dougherty13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/DoughertyD13,
author = {Edward R. Dougherty and
Lori A. Dalton},
title = {Scientific knowledge is possible with small-sample classification},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2013},
pages = {10},
year = {2013},
url = {https://doi.org/10.1186/1687-4153-2013-10},
doi = {10.1186/1687-4153-2013-10},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/DoughertyD13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/HeckelSB13,
author = {Reinhard Heckel and
Steffen Schober and
Martin Bossert},
title = {Harmonic analysis of Boolean networks: determinative power and perturbations},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2013},
pages = {6},
year = {2013},
url = {https://doi.org/10.1186/1687-4153-2013-6},
doi = {10.1186/1687-4153-2013-6},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/HeckelSB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/HsiaoCRWC13,
author = {Tzu{-}Hung Hsiao and
Hung{-}I Harry Chen and
Stephanie Roessler and
Xin Wei Wang and
Yidong Chen},
title = {Identification of genomic functional hotspots with copy number alteration
in liver cancer},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2013},
pages = {14},
year = {2013},
url = {https://doi.org/10.1186/1687-4153-2013-14},
doi = {10.1186/1687-4153-2013-14},
timestamp = {Tue, 28 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/HsiaoCRWC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/JenningsMCMB13,
author = {Elizabeth M. Jennings and
Jeffrey S. Morris and
Raymond J. Carroll and
Ganiraju Manyam and
Veerabhadran Baladandayuthapani},
title = {Bayesian methods for expression-based integration of various types
of genomics data},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2013},
pages = {13},
year = {2013},
url = {https://doi.org/10.1186/1687-4153-2013-13},
doi = {10.1186/1687-4153-2013-13},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/JenningsMCMB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/JiaW13,
author = {Bin Jia and
Xiaodong Wang},
title = {Gene regulatory network inference by point-based Gaussian approximation
filters incorporating the prior information},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2013},
pages = {16},
year = {2013},
url = {https://doi.org/10.1186/1687-4153-2013-16},
doi = {10.1186/1687-4153-2013-16},
timestamp = {Thu, 24 Feb 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/JiaW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/Karlebach13,
author = {Guy Karlebach},
title = {Inferring Boolean network states from partial information},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2013},
pages = {11},
year = {2013},
url = {https://doi.org/10.1186/1687-4153-2013-11},
doi = {10.1186/1687-4153-2013-11},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/Karlebach13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/KlotzFSBES13,
author = {Johannes Georg Klotz and
Ronny Feuer and
Oliver Sawodny and
Martin Bossert and
Michael Ederer and
Steffen Schober},
title = {Properties of Boolean networks and methods for their tests},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2013},
pages = {1},
year = {2013},
url = {https://doi.org/10.1186/1687-4153-2013-1},
doi = {10.1186/1687-4153-2013-1},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/KlotzFSBES13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/LiuJQ13,
author = {Yihua Liu and
Yuan Ji and
Peng Qiu},
title = {Identification of thresholds for dichotomizing {DNA} methylation data},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2013},
pages = {8},
year = {2013},
url = {https://doi.org/10.1186/1687-4153-2013-8},
doi = {10.1186/1687-4153-2013-8},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/LiuJQ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/QabajaABA13,
author = {Ala Qabaja and
Mohammed Al{-}Shalalfa and
Tarek A. Bismar and
Reda Alhajj},
title = {Protein network-based Lasso regression model for the construction
of disease-miRNA functional interactions},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2013},
pages = {3},
year = {2013},
url = {https://doi.org/10.1186/1687-4153-2013-3},
doi = {10.1186/1687-4153-2013-3},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/QabajaABA13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SrivastavaWMOB13,
author = {Sanvesh Srivastava and
Wenyi Wang and
Ganiraju Manyam and
Carlos Ordonez and
Veerabhadran Baladandayuthapani},
title = {Integrating multi-platform genomic data using hierarchical Bayesian
relevance vector machines},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2013},
pages = {9},
year = {2013},
url = {https://doi.org/10.1186/1687-4153-2013-9},
doi = {10.1186/1687-4153-2013-9},
timestamp = {Fri, 26 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/SrivastavaWMOB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/TabusSA13,
author = {Ioan Tabus and
Erchin Serpedin and
Jaakko Astola},
title = {Obituary: Professor Paul Dan Cristea},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2013},
pages = {7},
year = {2013},
url = {https://doi.org/10.1186/1687-4153-2013-7},
doi = {10.1186/1687-4153-2013-7},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/TabusSA13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/TangDZW13,
author = {Wenlong Tang and
Junbo Duan and
Ji{-}Gang Zhang and
Yu{-}Ping Wang},
title = {Subtyping glioblastoma by combining miRNA and mRNA expression data
using compressed sensing-based approach},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2013},
pages = {2},
year = {2013},
url = {https://doi.org/10.1186/1687-4153-2013-2},
doi = {10.1186/1687-4153-2013-2},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/TangDZW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/VillaniS13,
author = {Marco Villani and
Roberto Serra},
title = {On the dynamical properties of a model of cell differentiation},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2013},
pages = {4},
year = {2013},
url = {https://doi.org/10.1186/1687-4153-2013-4},
doi = {10.1186/1687-4153-2013-4},
timestamp = {Thu, 10 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/VillaniS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/WangW13,
author = {Liming Wang and
Xiaodong Wang},
title = {Hierarchical Dirichlet process model for gene expression clustering},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2013},
pages = {5},
year = {2013},
url = {https://doi.org/10.1186/1687-4153-2013-5},
doi = {10.1186/1687-4153-2013-5},
timestamp = {Thu, 24 Feb 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/WangW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/AndreychenkoMSW12,
author = {Aleksandr Andreychenko and
Linar Mikeev and
David Spieler and
Verena Wolf},
title = {Approximate maximum likelihood estimation for stochastic chemical
kinetics},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {9},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-9},
doi = {10.1186/1687-4153-2012-9},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/AndreychenkoMSW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/BesozziCPMCM12,
author = {Daniela Besozzi and
Paolo Cazzaniga and
Dario Pescini and
Giancarlo Mauri and
Sonia Colombo and
Enzo Martegani},
title = {The role of feedback control mechanisms on the establishment of oscillatory
regimes in the Ras/cAMP/PKA pathway in S. cerevisiae},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {10},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-10},
doi = {10.1186/1687-4153-2012-10},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/BesozziCPMCM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/BresslerLERKRKBS12,
author = {Ryan Bressler and
Jake Lin and
Andrea Eakin and
Thomas Robinson and
Richard Kreisberg and
Hector Rovira and
Theo A. Knijnenburg and
John Boyle and
Ilya Shmulevich},
title = {Fastbreak: a tool for analysis and visualization of structural variations
in genomic data},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {15},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-15},
doi = {10.1186/1687-4153-2012-15},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/BresslerLERKRKBS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/DurstonCWL12,
author = {Kirk K. Durston and
David K. Y. Chiu and
Andrew K. C. Wong and
Gary C. L. Li},
title = {Statistical discovery of site inter-dependencies in sub-molecular
hierarchical protein structuring},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {8},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-8},
doi = {10.1186/1687-4153-2012-8},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/DurstonCWL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/FeuerGVKSBSSE12,
author = {Ronny Feuer and
Katrin Gottlieb and
Gero Viertel and
Johannes Georg Klotz and
Steffen Schober and
Martin Bossert and
Oliver Sawodny and
Georg A. Sprenger and
Michael Ederer},
title = {Model-based analysis of an adaptive evolution experiment with Escherichia
coli in a pyruvate limited continuous culture with glycerol},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {14},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-14},
doi = {10.1186/1687-4153-2012-14},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/FeuerGVKSBSSE12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/HasenauerHDSWA12,
author = {Jan Hasenauer and
Julian Heinrich and
Malgorzata Doszczak and
Peter Scheurich and
Daniel Weiskopf and
Frank Allg{\"{o}}wer},
title = {A visual analytics approach for models of heterogeneous cell populations},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {4},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-4},
doi = {10.1186/1687-4153-2012-4},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/HasenauerHDSWA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/HiroiKICYTOKOOMUFK12,
author = {Noriko Hiroi and
Michael Klann and
Keisuke Iba and
Pablo de Heras Ciechomski and
Shuji Yamashita and
Akito Tabira and
Takahiro Okuhara and
Takeshi Kubojima and
Yasunori Okada and
Kotaro Oka and
Robin Mange and
Michael Unger and
Akira Funahashi and
Heinz Koeppl},
title = {From Microscopy Data to in silico Environments for in vivo Oriented
Simulations},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {7},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-7},
doi = {10.1186/1687-4153-2012-7},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/HiroiKICYTOKOOMUFK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/IgnacSG12,
author = {Tomasz M. Ignac and
Nikita A. Sakhanenko and
David J. Galas},
title = {Relations between the set-complexity and the structure of graphs and
their sub-graphs},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {13},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-13},
doi = {10.1186/1687-4153-2012-13},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/IgnacSG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/KakumaniAD12,
author = {Rajasekhar Kakumani and
M. Omair Ahmad and
Vijay Kumar Devabhaktuni},
title = {Identification of CpG Islands in {DNA} Sequences using Statistically
Optimal Null Filters},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {12},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-12},
doi = {10.1186/1687-4153-2012-12},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/KakumaniAD12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/KumarC12,
author = {Chetan Kumar and
Alok Choudhary},
title = {A top-down approach to classify enzyme functional classes and sub-classes
using random forest},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {1},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-1},
doi = {10.1186/1687-4153-2012-1},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/KumarC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/LiQD12,
author = {Xiangfang Li and
Lijun Qian and
Edward R. Dougherty},
title = {Dynamical modeling of drug effect using hybrid systems},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {19},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-19},
doi = {10.1186/1687-4153-2012-19},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/LiQD12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/MurrugarraVAAL12,
author = {David Murrugarra and
Alan Veliz{-}Cuba and
Boris Aguilar and
Seda Arat and
Reinhard C. Laubenbacher},
title = {Modeling stochasticity and variability in gene regulatory networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {5},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-5},
doi = {10.1186/1687-4153-2012-5},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/MurrugarraVAAL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/NabaviW12,
author = {Seyedbehzad Nabavi and
Cranos M. Williams},
title = {A novel cost function to estimate parameters of oscillatory biochemical
systems},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {3},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-3},
doi = {10.1186/1687-4153-2012-3},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/NabaviW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/NigschHCSMBLJ12,
author = {Florian Nigsch and
Janna Hutz and
Ben Cornett and
Douglas W. Selinger and
Gregory McAllister and
Somnath Bandyopadhyay and
Joseph Loureiro and
Jeremy L. Jenkins},
title = {Determination of minimal transcriptional signatures of compounds for
target prediction},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {2},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-2},
doi = {10.1186/1687-4153-2012-2},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/NigschHCSMBLJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/PuchingerZKGK12,
author = {Martin Puchinger and
Clemens Zarzer and
Philipp K{\"{u}}gler and
Erwin Gaubitzer and
Gottfried K{\"{o}}hler},
title = {In vitro detection of adrenocorticotropic hormone levels by fluorescence
correlation spectroscopy immunoassay for mathematical modeling of
glucocorticoid-mediated feedback mechanisms},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {17},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-17},
doi = {10.1186/1687-4153-2012-17},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/PuchingerZKGK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/RushdiTS12,
author = {Ahmad A. Rushdi and
Jamal Tuqan and
Thomas Strohmer},
title = {Map-invariant spectral analysis for the identification of {DNA} periodicities},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {16},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-16},
doi = {10.1186/1687-4153-2012-16},
timestamp = {Wed, 13 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/RushdiTS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SuvakD12,
author = {Onder Suvak and
Alper Demir},
title = {Phase computations and phase models for discrete molecular oscillators},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {6},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-6},
doi = {10.1186/1687-4153-2012-6},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/SuvakD12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/WajidSNN12,
author = {Bilal Wajid and
Erchin Serpedin and
Mohamed N. Nounou and
Hazem N. Nounou},
title = {Optimal reference sequence selection for genome assembly using minimum
description length principle},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {18},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-18},
doi = {10.1186/1687-4153-2012-18},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/WajidSNN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/ZikmanisK12,
author = {Peteris Zikmanis and
Inara Kampenusa},
title = {Relationships between kinetic constants and the amino acid composition
of enzymes from the yeast Saccharomyces cerevisiae glycolysis pathway},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2012},
pages = {11},
year = {2012},
url = {https://doi.org/10.1186/1687-4153-2012-11},
doi = {10.1186/1687-4153-2012-11},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/ZikmanisK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/AcimovicMHTL11,
author = {Jugoslava Acimovic and
Tuomo M{\"{a}}ki{-}Marttunen and
Riikka Havela and
Heidi Teppola and
Marja{-}Leena Linne},
title = {Modeling of Neuronal Growth \emph{In Vitro}: Comparison of Simulation
Tools {NETMORPH} and {CX3D}},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2011},
year = {2011},
url = {https://doi.org/10.1155/2011/616382},
doi = {10.1155/2011/616382},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/AcimovicMHTL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/BakerPJ11,
author = {Syed Murtuza Baker and
C. Hart Poskar and
Bj{\"{o}}rn H. Junker},
title = {Unscented Kalman filter with parameter identifiability analysis for
the estimation of multiple parameters in kinetic models},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2011},
pages = {7},
year = {2011},
url = {https://doi.org/10.1186/1687-4153-2011-7},
doi = {10.1186/1687-4153-2011-7},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/BakerPJ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/DimitrovaMJ11,
author = {Elena S. Dimitrova and
Indranil Mitra and
Abdul Salam Jarrah},
title = {Probabilistic polynomial dynamical systems for reverse engineering
of gene regulatory networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2011},
pages = {1},
year = {2011},
url = {https://doi.org/10.1186/1687-4153-2011-1},
doi = {10.1186/1687-4153-2011-1},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/DimitrovaMJ11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/EmigKA11,
author = {Dorothea Emig and
Tim Kacprowski and
Mario Albrecht},
title = {Measuring and analyzing tissue specificity of human genes and protein
complexes},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2011},
pages = {5},
year = {2011},
url = {https://doi.org/10.1186/1687-4153-2011-5},
doi = {10.1186/1687-4153-2011-5},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/EmigKA11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/HenkelNHSSEH11,
author = {Sebastian Henkel and
Thomas N{\"{a}}gele and
Imke H{\"{o}}rmiller and
Thomas Sauter and
Oliver Sawodny and
Michael Ederer and
Arnd G. Heyer},
title = {A systems biology approach to analyse leaf carbohydrate metabolism
in Arabidopsis thaliana},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2011},
pages = {2},
year = {2011},
url = {https://doi.org/10.1186/1687-4153-2011-2},
doi = {10.1186/1687-4153-2011-2},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/HenkelNHSSEH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/MannerstromYR11,
author = {Henrik Mannerstr{\"{o}}m and
Olli Yli{-}Harja and
Andre S. Ribeiro},
title = {Inference of Kinetic Parameters of Delayed Stochastic Models of Gene
Expression Using a Markov Chain Approximation},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2011},
year = {2011},
url = {https://doi.org/10.1155/2011/572876},
doi = {10.1155/2011/572876},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/MannerstromYR11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/ManninenHTL11,
author = {Tiina Manninen and
Katri Hituri and
Eeva Toivari and
Marja{-}Leena Linne},
title = {Modeling Signal Transduction Leading to Synaptic Plasticity: Evaluation
and Comparison of Five Models},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2011},
year = {2011},
url = {https://doi.org/10.1155/2011/797250},
doi = {10.1155/2011/797250},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/ManninenHTL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SchoberKHB11,
author = {Steffen Schober and
David Kracht and
Reinhard Heckel and
Martin Bossert},
title = {Detecting controlling nodes of boolean regulatory networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2011},
pages = {6},
year = {2011},
url = {https://doi.org/10.1186/1687-4153-2011-6},
doi = {10.1186/1687-4153-2011-6},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/SchoberKHB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/WittBSEKS11,
author = {Johannes Witt and
Sandra Barisic and
Oliver Sawodny and
Michael Ederer and
Dagmar Kulms and
Thomas Sauter},
title = {Modeling time delay in the NF{\(\kappa\)}B signaling pathway following
low dose {IL-1} stimulation},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2011},
pages = {3},
year = {2011},
url = {https://doi.org/10.1186/1687-4153-2011-3},
doi = {10.1186/1687-4153-2011-3},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/WittBSEKS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/XuC11,
author = {Zhouyi Xu and
Xiaodong Cai},
title = {Weighted next reaction method and parameter selection for efficient
simulation of rare events in biochemical reaction systems},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2011},
pages = {4},
year = {2011},
url = {https://doi.org/10.1186/1687-4153-2011-4},
doi = {10.1186/1687-4153-2011-4},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/XuC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/Almudevar10,
author = {Anthony Almudevar},
title = {A Hypothesis Test for Equality of Bayesian Network Models},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2010},
year = {2010},
url = {https://doi.org/10.1155/2010/947564},
doi = {10.1155/2010/947564},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/Almudevar10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/ChenYWD10,
author = {Jie Chen and
Ayten Yigiter and
Yu{-}Ping Wang and
Hong{-}Wen Deng},
title = {A Bayesian Analysis for Identifying {DNA} Copy Number Variations Using
a Compound Poisson Process},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2010},
year = {2010},
url = {https://doi.org/10.1155/2010/268513},
doi = {10.1155/2010/268513},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/ChenYWD10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/KobayashiIH10,
author = {Koichi Kobayashi and
Jun{-}ichi Imura and
Kunihiko Hiraishi},
title = {Polynomial-Time Algorithm for Controllability Test of a Class of Boolean
Biological Networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2010},
year = {2010},
url = {https://doi.org/10.1155/2010/210685},
doi = {10.1155/2010/210685},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/KobayashiIH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/Oyana10,
author = {Tonny J. Oyana},
title = {A New-Fangled \emph{FES-k}-Means Clustering Algorithm for Disease
Discovery and Visual Analytics},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2010},
year = {2010},
url = {https://doi.org/10.1155/2010/746021},
doi = {10.1155/2010/746021},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/Oyana10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/ShamirROFG10,
author = {Lior Shamir and
Salim Rahimi and
Nikita Orlov and
Luigi Ferrucci and
Ilya G. Goldberg},
title = {Progression Analysis and Stage Discovery in Continuous Physiological
Processes Using Image Computing},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2010},
year = {2010},
url = {https://doi.org/10.1155/2010/107036},
doi = {10.1155/2010/107036},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/ShamirROFG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/WeirR10,
author = {Michael P. Weir and
Michael D. Rice},
title = {{TRII:} {A} Probabilistic Scoring of \emph{Drosophila melanogaster}
Translation Initiation Sites},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2010},
year = {2010},
url = {https://doi.org/10.1155/2010/814127},
doi = {10.1155/2010/814127},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/WeirR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/Almudevar09,
author = {Anthony Almudevar},
title = {Selection of Statistical Thresholds in Graphical Models},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/878013},
doi = {10.1155/2009/878013},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/Almudevar09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/AndorfGSWAR09,
author = {Sandra Andorf and
Tanja G{\"{a}}rtner and
Matthias Steinfath and
Hanna Witucka{-}Wall and
Thomas Altmann and
Dirk Repsilber},
title = {Towards Systems Biology of Heterosis: {A} Hypothesis about Molecular
Network Structure Applied for the Arabidopsis Metabolome},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/147157},
doi = {10.1155/2009/147157},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/AndorfGSWAR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/DaiSMB09,
author = {Wei Dai and
Mona A. Sheikh and
Olgica Milenkovic and
Richard G. Baraniuk},
title = {Compressive Sensing {DNA} Microarrays},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/162824},
doi = {10.1155/2009/162824},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/DaiSMB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/EbenhohH09,
author = {Oliver Ebenh{\"{o}}h and
Thomas Handorf},
title = {Functional Classification of Genome-Scale Metabolic Networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/570456},
doi = {10.1155/2009/570456},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/EbenhohH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/Epps09,
author = {Julien Epps},
title = {A Hybrid Technique for the Periodicity Characterization of Genomic
Sequence Data},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/924601},
doi = {10.1155/2009/924601},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/Epps09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/FaryabiVCDD09,
author = {Babak Faryabi and
Golnaz Vahedi and
Jean{-}Fran{\c{c}}ois Chamberland and
Aniruddha Datta and
Edward R. Dougherty},
title = {Intervention in Context-Sensitive Probabilistic Boolean Networks Revisited},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/360864},
doi = {10.1155/2009/360864},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/FaryabiVCDD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/GaoPS09,
author = {Xin Gao and
Daniel Q. Pu and
Peter X. K. Song},
title = {Transition Dependency: {A} Gene-Gene Interaction Measure for Times
Series Microarray Data},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/535869},
doi = {10.1155/2009/535869},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/GaoPS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/HacheLH09,
author = {Hendrik Hache and
Hans Lehrach and
Ralf Herwig},
title = {Reverse Engineering of Gene Regulatory Networks: {A} Comparative Study},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/617281},
doi = {10.1155/2009/617281},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/HacheLH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/HestilowH09,
author = {Travis J. Hestilow and
Yufei Huang},
title = {Clustering of Gene Expression Data Based on Shape Similarity},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/195712},
doi = {10.1155/2009/195712},
timestamp = {Tue, 28 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/HestilowH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/KohWSK09,
author = {Chushin Koh and
Fang{-}Xiang Wu and
Gopalan Selvaraj and
Anthony J. Kusalik},
title = {Using a State-Space Model and Location Analysis to Infer Time-Delayed
Regulatory Networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/484601},
doi = {10.1155/2009/484601},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/KohWSK09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/LinH09,
author = {Kuang Lin and
Dirk Husmeier},
title = {Modelling Transcriptional Regulation with a Mixture of Factor Analyzers
and Variational Bayesian Expectation Maximization},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/601068},
doi = {10.1155/2009/601068},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/LinH09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/NesBRR09,
author = {Peter van Nes and
Domenico Bellomo and
Marcel J. T. Reinders and
Dick de Ridder},
title = {Stability from Structure: Metabolic Networks Are Unlike Other Biological
Networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/630695},
doi = {10.1155/2009/630695},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/NesBRR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/OlsenMB09,
author = {Catharina Olsen and
Patrick E. Meyer and
Gianluca Bontempi},
title = {On the Impact of Entropy Estimation on Transcriptional Regulatory
Network Inference Based on Mutual Information},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/308959},
doi = {10.1155/2009/308959},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/OlsenMB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/Radde09,
author = {Nicole Radde},
title = {The Impact of Time Delays on the Robustness of Biological Oscillators
and the Effect of Bifurcations on the Inverse Problem},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/327503},
doi = {10.1155/2009/327503},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/Radde09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/RepsilberMB09,
author = {Dirk Repsilber and
Thomas Martinetz and
Mats Bj{\"{o}}rklund},
title = {Adaptive Dynamics of Regulatory Networks: Size Matters},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/618502},
doi = {10.1155/2009/618502},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/RepsilberMB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/Rosenfeld09,
author = {Simon Rosenfeld},
title = {Origins of Stochasticity and Burstiness in High-Dimensional Biochemical
Networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/362309},
doi = {10.1155/2009/362309},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/Rosenfeld09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SchbathLS09,
author = {Sophie Schbath and
Vincent Lacroix and
Marie{-}France Sagot},
title = {Assessing the Exceptionality of Coloured Motifs in Networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/616234},
doi = {10.1155/2009/616234},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/SchbathLS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SehgalGDC09,
author = {Muhammad Shoaib B. Sehgal and
Iqbal Gondal and
Laurence S. Dooley and
Ross L. Coppel},
title = {How to Improve Postgenomic Knowledge Discovery Using Imputation},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/717136},
doi = {10.1155/2009/717136},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/SehgalGDC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SelbigSR09,
author = {Joachim Selbig and
Matthias Steinfath and
Dirk Repsilber},
title = {Network Structure and Biological Function: Reconstruction, Modeling,
and Statistical Approaches},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/714985},
doi = {10.1155/2009/714985},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/SelbigSR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SerpedinGHB09,
author = {Erchin Serpedin and
Javier Garcia{-}Fr{\'{\i}}as and
Yufei Huang and
Ulisses M. Braga{-}Neto},
title = {Applications of Signal Processing Techniques to Bioinformatics, Genomics,
and Proteomics},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/250306},
doi = {10.1155/2009/250306},
timestamp = {Mon, 03 Jun 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/SerpedinGHB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SongLLCYLLB09,
author = {Mingzhou (Joe) Song and
Chris K. Lewis and
Eric R. Lance and
Elissa J. Chesler and
Roumyana Kirova Yordanova and
Michael A. Langston and
Kerrie H. Lodowski and
Susan E. Bergeson},
title = {Reconstructing Generalized Logical Networks of Transcriptional Regulation
in Mouse Brain from Temporal Gene Expression Data},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/545176},
doi = {10.1155/2009/545176},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/SongLLCYLLB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SunBD09,
author = {Youting Sun and
Ulisses M. Braga{-}Neto and
Edward R. Dougherty},
title = {Impact of Missing Value Imputation on Classification for {DNA} Microarray
Gene Expression Data - {A} Model-Based Study},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/504069},
doi = {10.1155/2009/504069},
timestamp = {Fri, 24 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/SunBD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/VuB09,
author = {Thang T. Vu and
Ulisses M. Braga{-}Neto},
title = {Is Bagging Effective in the Classification of Small-Sample Genomic
and Proteomic Data?},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/158368},
doi = {10.1155/2009/158368},
timestamp = {Fri, 24 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/VuB09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/XuC09,
author = {Zhouyi Xu and
Xiaodong Cai},
title = {Stochastic Simulation of Delay-Induced Circadian Rhythms in \emph{Drosophila}},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/386853},
doi = {10.1155/2009/386853},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/XuC09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/Yoon09,
author = {Byung{-}Jun Yoon},
title = {Efficient Alignment of RNAs with Pseudoknots Using Sequence Alignment
Constraints},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/491074},
doi = {10.1155/2009/491074},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/Yoon09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/ZellerFT09,
author = {Cordula Zeller and
Holger Fr{\"{o}}hlich and
Achim Tresch},
title = {A Bayesian Network View on Nested Effects Models},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/195272},
doi = {10.1155/2009/195272},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/ZellerFT09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/ZhaoSD09,
author = {Wentao Zhao and
Erchin Serpedin and
Edward R. Dougherty},
title = {Spectral Preprocessing for Clustering Time-Series Gene Expressions},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/713248},
doi = {10.1155/2009/713248},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/ZhaoSD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/ZhaoSD09a,
author = {Wentao Zhao and
Erchin Serpedin and
Edward R. Dougherty},
title = {Identifying Genes Involved in Cyclic Processes by Combining Gene Expression
Analysis and Prior Knowledge},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2009},
year = {2009},
url = {https://doi.org/10.1155/2009/683463},
doi = {10.1155/2009/683463},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/ZhaoSD09a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/BrunXD08,
author = {Marcel Brun and
Qian Xu and
Edward R. Dougherty},
title = {Which Is Better: Holdout or Full-Sample Classifier Design?},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2008},
year = {2008},
url = {https://doi.org/10.1155/2008/297945},
doi = {10.1155/2008/297945},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ejbsb/BrunXD08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/DoughertyTA08,
author = {John Dougherty and
Ioan Tabus and
Jaakko Astola},
title = {Inference of Gene Regulatory Networks Based on a Universal Minimum
Description Length},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2008},
year = {2008},
url = {https://doi.org/10.1155/2008/482090},
doi = {10.1155/2008/482090},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/DoughertyTA08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/FaryabiVCDD08,
author = {Babak Faryabi and
Golnaz Vahedi and
Jean{-}Fran{\c{c}}ois Chamberland and
Aniruddha Datta and
Edward R. Dougherty},
title = {Optimal Constrained Stationary Intervention in Gene Regulatory Networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2008},
year = {2008},
url = {https://doi.org/10.1155/2008/620767},
doi = {10.1155/2008/620767},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/FaryabiVCDD08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/GaudanJLR08,
author = {Sylvain Gaudan and
Antonio Jimeno{-}Yepes and
Vivian Lee and
Dietrich Rebholz{-}Schuhmann},
title = {Combining Evidence, Specificity, and Proximity towards the Normalization
of Gene Ontology Terms in Text},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2008},
year = {2008},
url = {https://doi.org/10.1155/2008/342746},
doi = {10.1155/2008/342746},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/GaudanJLR08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/GuptaAKTA08,
author = {Rashi Gupta and
Elja Arjas and
Sangita Kulathinal and
Andrew Thomas and
Petri Auvinen},
title = {Bayesian Hierarchical Model for Estimating Gene Expression Intensity
Using Multiple Scanned Microarrays},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2008},
year = {2008},
url = {https://doi.org/10.1155/2008/231950},
doi = {10.1155/2008/231950},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/GuptaAKTA08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/GuptaMS08,
author = {Ravi Gupta and
Ankush Mittal and
Kuldip Singh},
title = {A Time-Series-Based Feature Extraction Approach for Prediction of
Protein Structural Class},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2008},
year = {2008},
url = {https://doi.org/10.1155/2008/235451},
doi = {10.1155/2008/235451},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/GuptaMS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/HayashidaTAZC08,
author = {Morihiro Hayashida and
Takeyuki Tamura and
Tatsuya Akutsu and
Shuqin Zhang and
Wai{-}Ki Ching},
title = {Algorithms and Complexity Analyses for Control of Singleton Attractors
in Boolean Networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2008},
year = {2008},
url = {https://doi.org/10.1155/2008/521407},
doi = {10.1155/2008/521407},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/HayashidaTAZC08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/LiSB08,
author = {Linzhong Li and
Robert M. Seymour and
Stephen Baigent},
title = {Integrating Biosystem Models Using Waveform Relaxation},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2008},
year = {2008},
url = {https://doi.org/10.1155/2008/308623},
doi = {10.1155/2008/308623},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/LiSB08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/LiangW08,
author = {Kuo{-}ching Liang and
Xiaodong Wang},
title = {Gene Regulatory Network Reconstruction Using Conditional Mutual Information},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2008},
year = {2008},
url = {https://doi.org/10.1155/2008/253894},
doi = {10.1155/2008/253894},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/LiangW08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/LiuLDS08,
author = {Wenbin Liu and
Harri L{\"{a}}hdesm{\"{a}}ki and
Edward R. Dougherty and
Ilya Shmulevich},
title = {Inference of Boolean Networks Using Sensitivity Regularization},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2008},
year = {2008},
url = {https://doi.org/10.1155/2008/780541},
doi = {10.1155/2008/780541},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/LiuLDS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/PournaraW08,
author = {Iosifina Pournara and
Lorenz Wernisch},
title = {Using Temporal Correlation in Factor Analysis for Reconstructing Transcription
Factor Activities},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2008},
year = {2008},
url = {https://doi.org/10.1155/2008/172840},
doi = {10.1155/2008/172840},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/PournaraW08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/ZhaoASD08,
author = {Wentao Zhao and
Kwadwo Agyepong and
Erchin Serpedin and
Edward R. Dougherty},
title = {Detecting Periodic Genes from Irregularly Sampled Gene Expressions:
{A} Comparison Study},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2008},
year = {2008},
url = {https://doi.org/10.1155/2008/769293},
doi = {10.1155/2008/769293},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/ZhaoASD08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/ZhaoSD08,
author = {Wentao Zhao and
Erchin Serpedin and
Edward R. Dougherty},
title = {Recovering Genetic Regulatory Networks from Chromatin Immunoprecipitation
and Steady-State Microarray Data},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2008},
year = {2008},
url = {https://doi.org/10.1155/2008/248747},
doi = {10.1155/2008/248747},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/ZhaoSD08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/AburataniSSHKH07,
author = {Sachiyo Aburatani and
Fuyan Sun and
Shigeru Saito and
Masao Honda and
Shuichi Kaneko and
Katsuhisa Horimoto},
title = {Gene Systems Network Inferred from Expression Profiles in Hepatocellular
Carcinogenesis by Graphical Gaussian Model},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/47214},
doi = {10.1155/2007/47214},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/AburataniSSHKH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/AktulgaKLSGS07,
author = {Hasan Metin Aktulga and
Ioannis Kontoyiannis and
Leszek Alex Lyznik and
Lukasz Szpankowski and
Ananth Grama and
Wojciech Szpankowski},
title = {Identifying Statistical Dependence in Genomic Sequences via Mutual
Information Estimates},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/14741},
doi = {10.1155/2007/14741},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/AktulgaKLSGS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/BenedettoCC07,
author = {Dario Benedetto and
Emanuele Caglioti and
Claudia Chica},
title = {Compressing Proteomes: The Relevance of Medium Range Correlations},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/60723},
doi = {10.1155/2007/60723},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/BenedettoCC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/BollmanCO07,
author = {Dorothy Bollman and
Omar Col{\'{o}}n{-}Reyes and
Edusmildo Orozco},
title = {Fixed Points in Discrete Models for Regulatory Genetic Networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/97356},
doi = {10.1155/2007/97356},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/BollmanCO07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/BrunKCD07,
author = {Marcel Brun and
Seungchan Kim and
Woonjung Choi and
Edward R. Dougherty},
title = {Comparison of Gene Regulatory Networks via Steady-State Trajectories},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/82702},
doi = {10.1155/2007/82702},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/BrunKCD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/Conery07,
author = {John S. Conery},
title = {Aligning Sequences by Minimum Description Length},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/72936},
doi = {10.1155/2007/72936},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/Conery07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/DejeanMBB07,
author = {S{\'{e}}bastien D{\'{e}}jean and
Pascal G. P. Martin and
Alain Baccini and
Philippe Besse},
title = {Clustering Time-Series Gene Expression Data Using Smoothing Spline
Derivatives},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/70561},
doi = {10.1155/2007/70561},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/DejeanMBB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/DoughertyACT07,
author = {Edward R. Dougherty and
Tatsuya Akutsu and
Paul Dan Cristea and
Ahmed H. Tewfik},
title = {Genetic Regulatory Networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/17321},
doi = {10.1155/2007/17321},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/DoughertyACT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/EvansKMMCT07,
author = {Scott C. Evans and
Antonis Kourtidis and
T. Stephen Markham and
Jonathan Miller and
Douglas S. Conklin and
Andrew S. Torres},
title = {MicroRNA Target Detection and Analysis for Genes Related to Breast
Cancer Using MDLcompress},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/43670},
doi = {10.1155/2007/43670},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/EvansKMMCT07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/FabrisST07,
author = {Francesco Fabris and
Andrea Sgarro and
Alessandro Tossi},
title = {Splitting the {BLOSUM} Score into Numbers of Biological Significance},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/31450},
doi = {10.1155/2007/31450},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/FabrisST07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/FuS07,
author = {Li M. Fu and
Thomas M. Shinnick},
title = {Genome-Wide Analysis of Intergenic Regions of \emph{Mycobacterium
tuberculosis} H37Rv Using Affymetrix GeneChips},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/23054},
doi = {10.1155/2007/23054},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/FuS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/GuptaSMS07,
author = {Ravi Gupta and
Divya Sarthi and
Ankush Mittal and
Kuldip Singh},
title = {A Novel Signal Processing Measure to Identify Exact and Inexact Tandem
Repeat Patterns in {DNA} Sequences},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/43596},
doi = {10.1155/2007/43596},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/GuptaSMS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/HanczarHD07,
author = {Blaise Hanczar and
Jianping Hua and
Edward R. Dougherty},
title = {Decorrelation of the True and Estimated Classifier Errors in High-Dimensional
Settings},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/38473},
doi = {10.1155/2007/38473},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/HanczarHD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/HemmerichK07,
author = {Christopher Michael Hemmerich and
Sun Kim},
title = {A Study of Residue Correlation within Protein Sequences and Its Application
to Sequence Classification},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/87356},
doi = {10.1155/2007/87356},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/HemmerichK07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/JoseTD07,
author = {Hena Jose and
Vadivukarasi Thangavel and
Jyothi Devakumar},
title = {Extraction of Protein Interaction Data: {A} Comparative Analysis of
Methods in Use},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/53096},
doi = {10.1155/2007/53096},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/JoseTD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/KontkanenWM07,
author = {Petri Kontkanen and
Hannes Wettig and
Petri Myllym{\"{a}}ki},
title = {{NML} Computation Algorithms for Tree-Structured Multinomial Bayesian
Networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/90947},
doi = {10.1155/2007/90947},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/KontkanenWM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/LiSZ07,
author = {Huai Li and
Yu Sun and
Ming Zhan},
title = {Analysis of Gene Coexpression by B-Spline Based CoD Estimation},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/49478},
doi = {10.1155/2007/49478},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/LiSZ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/MarshallYXD07,
author = {Stephen Marshall and
Le Yu and
Yufei Xiao and
Edward R. Dougherty},
title = {Inference of a Probabilistic Boolean Network from a Single Observed
Temporal Sequence},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/32454},
doi = {10.1155/2007/32454},
timestamp = {Mon, 24 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/MarshallYXD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/MeyerKLB07,
author = {Patrick E. Meyer and
Kevin Kontos and
Fr{\'{e}}d{\'{e}}ric Lafitte and
Gianluca Bontempi},
title = {Information-Theoretic Inference of Large Transcriptional Regulatory
Networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/79879},
doi = {10.1155/2007/79879},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/MeyerKLB07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/NiemistoNAJMARTLY07,
author = {Antti Niemist{\"{o}} and
Matti Nykter and
Tommi Aho and
Henna Jalovaara and
Kalle Marjanen and
Miika Ahdesm{\"{a}}ki and
Pekka Ruusuvuori and
Mikko Tiainen and
Marja{-}Leena Linne and
Olli Yli{-}Harja},
title = {Computational Methods for Estimation of Cell Cycle Phase Distributions
of Yeast Cells},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/46150},
doi = {10.1155/2007/46150},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/NiemistoNAJMARTLY07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/RaoHSE07,
author = {Arvind Rao and
Alfred O. Hero III and
David J. States and
James Douglas Engel},
title = {Inferring Time-Varying Network Topologies from Gene Expression Data},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/51947},
doi = {10.1155/2007/51947},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/RaoHSE07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/RaoHSE07a,
author = {Arvind Rao and
Alfred O. Hero III and
David J. States and
James Douglas Engel},
title = {Motif Discovery in Tissue-Specific Regulatory Sequences Using Directed
Information},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/13853},
doi = {10.1155/2007/13853},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/RaoHSE07a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/RissanenGHMRR07,
author = {Jorma Rissanen and
Peter D. Gr{\"{u}}nwald and
Jukka Heikkonen and
Petri Myllym{\"{a}}ki and
Teemu Roos and
Juho Rousu},
title = {Information Theoretic Methods for Bioinformatics},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/79128},
doi = {10.1155/2007/79128},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/RissanenGHMRR07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SarkarMF07,
author = {Anamika Sarkar and
Marina Meila and
B. Robert Franza},
title = {I{\(\kappa\)}B, NF-{\(\kappa\)}B Regulation Model: Simulation Analysis
of Small Number of Molecules},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/25250},
doi = {10.1155/2007/25250},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/SarkarMF07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SondhiRKM07,
author = {Parikshit Sondhi and
Purushottam Raj and
V. Vinod Kumar and
Ankush Mittal},
title = {Question Processing and Clustering in {INDOC:} {A} Biomedical Question
Answering System},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/28576},
doi = {10.1155/2007/28576},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/SondhiRKM07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SongDWS07,
author = {Jiuzhou Z. Song and
Kan{-}Ming Duan and
T. Ware and
Michael G. Surette},
title = {The Wavelet-Based Cluster Analysis for Temporal Gene Expression Data},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/39382},
doi = {10.1155/2007/39382},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/SongDWS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SuzukiST07,
author = {Haruo Suzuki and
Rintaro Saito and
Masaru Tomita},
title = {Variation in the Correlation of {G} + {C} Composition with Synonymous
Codon Usage Bias among Bacteria},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/61374},
doi = {10.1155/2007/61374},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/SuzukiST07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/Tienda-LunaHYPP07,
author = {Isabel M. Tienda{-}Luna and
Yufei Huang and
Yufang Yin and
Diego Pablo Ruiz Padillo and
Maria Carmen Carrion Perez},
title = {Uncovering Gene Regulatory Networks from Time-Series Microarray Data
with Variational Bayesian Structural Expectation Maximization},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/71312},
doi = {10.1155/2007/71312},
timestamp = {Tue, 28 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/Tienda-LunaHYPP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/TrepodeABBGH07,
author = {Nestor Walter Trepode and
Hugo Aguirre Armelin and
Michael L. Bittner and
Junior Barrera and
Marco Dimas Gubitoso and
Ronaldo Fumio Hashimoto},
title = {A Robust Structural {PGN} Model for Control of Cell-Cycle Progression
Stabilized by Negative Feedbacks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/73109},
doi = {10.1155/2007/73109},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/TrepodeABBGH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/XiaoHD07,
author = {Yufei Xiao and
Jianping Hua and
Edward R. Dougherty},
title = {Quantification of the Impact of Feature Selection on the Variance
of Cross-Validation Error Estimation},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/16354},
doi = {10.1155/2007/16354},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/XiaoHD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/XuanWDFWKBWPWCCH07,
author = {Jianhua Xuan and
Yue Joseph Wang and
Yibin Dong and
Yuanjian Feng and
Bin Wang and
Javed I. Khan and
Marina Bakay and
Zuyi Wang and
Lauren Pachman and
Sara Winokur and
Yi{-}Wen Chen and
Robert Clarke and
Eric P. Hoffman},
title = {Gene Selection for Multiclass Prediction by Weighted Fisher Criterion},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/64628},
doi = {10.1155/2007/64628},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/XuanWDFWKBWPWCCH07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/ZhangHACN07,
author = {Shuqin Zhang and
Morihiro Hayashida and
Tatsuya Akutsu and
Wai{-}Ki Ching and
Michael Kwok{-}Po Ng},
title = {Algorithms for Finding Small Attractors in Boolean Networks},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2007},
year = {2007},
url = {https://doi.org/10.1155/2007/20180},
doi = {10.1155/2007/20180},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/ZhangHACN07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/ChiuW06,
author = {David K. Y. Chiu and
Yan Wang},
title = {Multipattern Consensus Regions in Multiple Aligned Protein Sequences
and Their Segmentation},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2006},
year = {2006},
url = {https://doi.org/10.1155/BSB/2006/35809},
doi = {10.1155/BSB/2006/35809},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/ChiuW06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/GeorgievPG06,
author = {Nikola Georgiev and
Valko Petrov and
Georgi Georgiev},
title = {Reaction-Diffusion Modeling {ERK-} and STAT-Interaction Dynamics},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2006},
year = {2006},
url = {https://doi.org/10.1155/BSB/2006/85759},
doi = {10.1155/BSB/2006/85759},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/GeorgievPG06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/HuaBCLBXSD06,
author = {Jianping Hua and
Yoganand Balagurunathan and
Yidong Chen and
James Lowey and
Michael L. Bittner and
Zixiang Xiong and
Edward Suh and
Edward R. Dougherty},
title = {Normalization Benefits Microarray-Based Classification},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2006},
year = {2006},
url = {https://doi.org/10.1155/BSB/2006/43056},
doi = {10.1155/BSB/2006/43056},
timestamp = {Tue, 28 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/HuaBCLBXSD06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/PonnalaSBV06,
author = {Lalit Ponnala and
Anne{-}Marie Stomp and
Donald L. Bitzer and
Mladen A. Vouk},
title = {Analysis of Free Energy Signals Arising from Nucleotide Hybridization
Between rRNA and mRNA Sequences during Translation in Eubacteria},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2006},
year = {2006},
url = {https://doi.org/10.1155/BSB/2006/23613},
doi = {10.1155/BSB/2006/23613},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/PonnalaSBV06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/Rosenfeld06,
author = {Simon Rosenfeld},
title = {Stochastic Oscillations in Genetic Regulatory Networks: Application
to Microarray Experiments},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2006},
year = {2006},
url = {https://doi.org/10.1155/BSB/2006/59526},
doi = {10.1155/BSB/2006/59526},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/Rosenfeld06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/XiaoGY06,
author = {Yuanhui Xiao and
Alexander Gordon and
Andrei Yakovlev},
title = {The L1-Version of the Cram{\'{e}}r-von Mises Test for Two-Sample
Comparisons in Microarray Data Analysis},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2006},
year = {2006},
url = {https://doi.org/10.1155/BSB/2006/85769},
doi = {10.1155/BSB/2006/85769},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/XiaoGY06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/Zhang06,
author = {Yingjie Zhang},
title = {An Improved Algorithm for the Piecewise-Smooth Mumford and Shah Model
in Image Segmentation},
journal = {{EURASIP} J. Bioinform. Syst. Biol.},
volume = {2006},
year = {2006},
url = {https://doi.org/10.1155/BSB/2006/84397},
doi = {10.1155/BSB/2006/84397},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ejbsb/Zhang06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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