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@inproceedings{DBLP:conf/isbra/AliMCAP24, author = {Sarwan Ali and Haris Mansoor and Prakash Chourasia and Yasir Ali and Murray Patterson}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Gaussian Beltrami-Klein Model for Protein Sequence Classification: {A} Hyperbolic Approach}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {52--62}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_5}, doi = {10.1007/978-981-97-5128-0\_5}, timestamp = {Tue, 23 Jul 2024 15:21:07 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AliMCAP24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AnBLGC24, author = {Ying An and Yaqi Bai and Yuan Liu and Lin Guo and Xianlai Chen}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {A Multimodal Federated Learning Framework for Modality Incomplete Scenarios in Healthcare}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {245--256}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_21}, doi = {10.1007/978-981-97-5131-0\_21}, timestamp = {Tue, 23 Jul 2024 15:21:07 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AnBLGC24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AnLZ24, author = {Kang An and Mingyu Lu and Yijia Zhang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {{DMSDR:} Drug Molecule Synergy-Enhanced Network for Drug Recommendation with Multi-source Domain Knowledge}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {164--175}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_15}, doi = {10.1007/978-981-97-5131-0\_15}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AnLZ24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AnZC24, author = {Ying An and Zhenrui Zhao and Xianlai Chen}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Multi-grained Cross-Modal Feature Fusion Network for Diagnosis Prediction}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {221--232}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_19}, doi = {10.1007/978-981-97-5131-0\_19}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AnZC24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AndrianovFGXKLVLT24, author = {Alexander M. Andrianov and Konstantin V. Furs and Anna V. Gonchar and Xiong Xie and Anna D. Karpenko and Yan V. Laikov and Danila A. Varabyeu and Hong Liu and Alexander V. Tuzikov}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Identification of Potential SARS-CoV-2 Main Protease Inhibitors Using Drug Repurposing and Molecular Modeling}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {439--448}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_36}, doi = {10.1007/978-981-97-5128-0\_36}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AndrianovFGXKLVLT24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BadalQLZ24, author = {Kushal Badal and Letu Qingge and Xiaowen Liu and Binhai Zhu}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Probabilistic and Machine Learning Models for the Protein Scaffold Gap Filling Problem}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {14956}, pages = {28--39}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5087-0\_3}, doi = {10.1007/978-981-97-5087-0\_3}, timestamp = {Sun, 08 Sep 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BadalQLZ24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BatainehNMA24, author = {Mohammad Bataineh and Kamal Al Nasr and Richard Mu and Mohammed Alamri}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Deep Learning Approach to Identify Protein's Secondary Structure Elements}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {461--472}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_38}, doi = {10.1007/978-981-97-5128-0\_38}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BatainehNMA24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BitonSAK24, author = {Noy Biton and Sharon Shoob and Ani Amar and Hillel Kugler}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Synthesis of Boolean Networks with Weak and Strong Regulators}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {119--131}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_11}, doi = {10.1007/978-981-97-5131-0\_11}, timestamp = {Fri, 02 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BitonSAK24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/CaiZZW24, author = {Yueyi Cai and Nan Zhou and Junran Zhao and Shunfang Wang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Learning an Adaptive Self-expressive Fusion Model for Multi-omics Cancer Subtype Prediction}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {274--285}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_22}, doi = {10.1007/978-981-97-5128-0\_22}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/CaiZZW24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/CaoGAW24, author = {Zeyu Cao and Fengyi Guo and Ying An and Jianxin Wang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Residual Spatio-Temporal Attention Based Prototypical Network for Rare Arrhythmia Classification}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {14956}, pages = {89--101}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5087-0\_8}, doi = {10.1007/978-981-97-5087-0\_8}, timestamp = {Wed, 28 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/CaoGAW24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChenHLJTP24, author = {Ming Chen and Zitao Hu and Xiujuan Lei and Chunyan Ji and Zhao Tong and Yi Pan}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Multi-filter Based Signed Graph Convolutional Networks for Predicting Interactions on Drug Networks}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {315--326}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_27}, doi = {10.1007/978-981-97-5131-0\_27}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChenHLJTP24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChenLZJS24, author = {Xinzi Chen and Pei Li and Weizhong Zhao and Xingpeng Jiang and Xianjun Shen}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {A Novel Combined Embedding Model Based on Heterogeneous Network for Inferring Microbe-Metabolite Interactions}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {196--211}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_16}, doi = {10.1007/978-981-97-5128-0\_16}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChenLZJS24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChenMWYY24, author = {Jingwei Chen and Weijie Miao and Wenyuan Wu and Linhan Yang and Haonan Yuan}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Secure Relative Detection in (Forensic) Database with Homomorphic Encryption}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {410--422}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_35}, doi = {10.1007/978-981-97-5131-0\_35}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChenMWYY24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChenNCZHCOFC24, author = {Xia Chen and Hao Nie and Quanwei Chen and Xiang Zhang and Zixing He and Xiuxiu Chao and Weihao Ou and Xiangzheng Fu and Haowen Chen}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {A Novel Approach for Subtype Identification via Multi-omics Data Using Adversarial Autoencoder}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {495--505}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_41}, doi = {10.1007/978-981-97-5128-0\_41}, timestamp = {Thu, 22 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChenNCZHCOFC24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChengFLX24, author = {Jianhong Cheng and Rui Feng and Jinyang Li and Jun Xu}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Incomplete Multimodal Learning with Modality-Aware Feature Interaction for Brain Tumor Segmentation}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {281--290}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_24}, doi = {10.1007/978-981-97-5131-0\_24}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChengFLX24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChuHDY24, author = {Shuang Chu and Xindi Huang and Guihua Duan and Cheng Yan}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Predicting Blood-Brain Barrier Permeability Through Multi-view Graph Neural Network with Global-Attention and Pre-trained Transformer}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {140--151}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_13}, doi = {10.1007/978-981-97-5131-0\_13}, timestamp = {Thu, 22 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChuHDY24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DaiLMFLY24, author = {Yidan Dai and Ye Li and Wenjun Ma and Xiaomao Fan and Ye Li and Huijun Yue}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {A Multi-scale Attention Network for Sleep Arousal Detection with Single-Channel {ECG}}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {71--82}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_7}, doi = {10.1007/978-981-97-5131-0\_7}, timestamp = {Wed, 07 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DaiLMFLY24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/FangGWZM24, author = {Donghai Fang and Yichen Gao and Zhaoying Wang and Fangfang Zhu and Wenwen Min}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Contrastive Masked Graph Autoencoders for Spatial Transcriptomics Data Analysis}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {76--88}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_7}, doi = {10.1007/978-981-97-5128-0\_7}, timestamp = {Fri, 02 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/FangGWZM24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GuoHLZ24, author = {Yi Guo and Xiaodi Hou and Zhi Liu and Yijia Zhang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {IFNet: An Image-Enhanced Cross-Modal Fusion Network for Radiology Report Generation}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {286--297}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_23}, doi = {10.1007/978-981-97-5128-0\_23}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GuoHLZ24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HeLLZ24, author = {Yongxin He and Jin Liu and Min Li and Ruiqing Zheng}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {scCoRR: {A} Data-Driven Self-correction Framework for Labeled scRNA-Seq Data}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {47--58}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_5}, doi = {10.1007/978-981-97-5131-0\_5}, timestamp = {Tue, 30 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HeLLZ24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HouWLPC24, author = {Jiale Hou and Zikai Wang and Haoran Lu and Xinzhe Pang and Yunpeng Cai}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {gaBERT: An Interpretable Pretrained Deep Learning Framework for Cancer Gene Marker Discovery}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {395--407}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_32}, doi = {10.1007/978-981-97-5128-0\_32}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HouWLPC24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/JiangPC24, author = {Limai Jiang and Yi Pan and Yunpeng Cai}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {{RFIR:} {A} Lightweight Network for Retinal Fundus Image Restoration}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {39--51}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_4}, doi = {10.1007/978-981-97-5128-0\_4}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/JiangPC24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/JiangZG24, author = {Yusheng Jiang and Hongyu Zhang and Jinting Guan}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {{UFGOT:} Unbalanced Filter Graph Alignment with Optimal Transport for Cancer Subtyping Based on Multi-omics Data}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {127--138}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_11}, doi = {10.1007/978-981-97-5128-0\_11}, timestamp = {Fri, 02 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/JiangZG24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/JuWLMXW24, author = {Zhen Ju and Mingyu Wang and Xuelei Li and Jintao Meng and Wenhui Xi and Yanjie Wei}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {An In-Depth Assessment of Sequence Clustering Software in Bioinformatics}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {359--370}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_29}, doi = {10.1007/978-981-97-5128-0\_29}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/JuWLMXW24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LanHSLCC24, author = {Wei Lan and Shengzu Huang and Xun Sun and Haibo Liao and Qingfeng Chen and Junyue Cao}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Single-Cell Multi-omics Clustering Algorithm Based on Adaptive Weighted Hyper-laplacian Regularization}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {373--382}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_32}, doi = {10.1007/978-981-97-5131-0\_32}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LanHSLCC24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LanZCZPC24, author = {Wei Lan and Weihao Zhou and Qingfeng Chen and Ruiqing Zheng and Yi Pan and Yi{-}Ping Phoebe Chen}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Modeling Single-Cell ATAC-Seq Data Based on Contrastive Learning}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {473--482}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_39}, doi = {10.1007/978-981-97-5128-0\_39}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LanZCZPC24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LeiTLHL24, author = {Yang Lei and Li Tang and HanYu Luo and WenJie Huang and Min Li}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {LoopNetica: Predicting Chromatin Loops Using Convolutional Neural Networks and Attention Mechanisms}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {14956}, pages = {14--27}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5087-0\_2}, doi = {10.1007/978-981-97-5087-0\_2}, timestamp = {Wed, 28 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LeiTLHL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiHTXCHZLWMZ24, author = {Xijian Li and Ying Huang and Runxuan Tang and Guangcheng Xiao and Xiaochuan Chen and Ruilin He and Zhaolei Zhang and Jiana Luo and Yanjie Wei and Yijun Mao and Huiling Zhang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {PmmNDD: Predicting the Pathogenicity of Missense Mutations in Neurodegenerative Diseases via Ensemble Learning}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {14956}, pages = {64--75}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5087-0\_6}, doi = {10.1007/978-981-97-5087-0\_6}, timestamp = {Wed, 28 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiHTXCHZLWMZ24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiL24, author = {Xiangyu Li and Liangliang Liu}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Patch-Based Coupled Attention Network to Predict {MSI} Status in Colon Cancer}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {132--139}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_12}, doi = {10.1007/978-981-97-5131-0\_12}, timestamp = {Fri, 02 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiLSL24, author = {Yunhai Li and Pengpai Li and Duanchen Sun and Zhi{-}Ping Liu}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Predicting Drug-Target Affinity Using Protein Pocket and Graph Convolution Network}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {1--12}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_1}, doi = {10.1007/978-981-97-5128-0\_1}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiLSL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiWLLLXD24, author = {Rongyuan Li and Jingli Wu and Gaoshi Li and Jiafei Liu and Jinlu Liu and Junbo Xuan and Zheng Deng}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {IntroGRN: Gene Regulatory Network Inference from Single-Cell {RNA} Data Based on Introspective {VAE}}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {427--438}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_35}, doi = {10.1007/978-981-97-5128-0\_35}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiWLLLXD24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiZW24, author = {Yuxiang Li and Haochen Zhao and Jianxin Wang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {{MEMDA:} {A} Multi-similarity Integration Pre-completion Algorithm with Error Correction for Predicting Microbe-Drug Associations}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {458--469}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_39}, doi = {10.1007/978-981-97-5131-0\_39}, timestamp = {Thu, 22 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiZW24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiangZW24, author = {Xiao Liang and Haochen Zhao and Jianxin Wang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {{KT-AMP:} Enhancing Antimicrobial Peptide Functions Prediction Through Knowledge Transfer on Protein Language Model}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {59--70}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_6}, doi = {10.1007/978-981-97-5131-0\_6}, timestamp = {Thu, 22 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiangZW24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuDMZT24, author = {Jin Liu and Hao Du and Junbin Mao and Jianchun Zhu and Xu Tian}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {A Novel Dual Interactive Network for Parkinson's Disease Diagnosis Based on Multi-modality Magnetic Resonance Imaging}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {434--444}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_37}, doi = {10.1007/978-981-97-5131-0\_37}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiuDMZT24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuLSZHW24, author = {Chang Liu and Tao Liu and Jingye Sheng and Jikun Zheng and Pengcheng Huang and Bin Wang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {The Dynamic Spatiotemporal Features Based on Rich Club Organization in Autism Spectrum Disorder}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {189--201}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_17}, doi = {10.1007/978-981-97-5131-0\_17}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiuLSZHW24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LongYGA24, author = {Jun Long and Jichao Yang and Lin Guo and Ying An}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {{KUMA-MI:} {A} 12-Lead Knowledge-Guided Multi-branch Attention Networks for Myocardial Infarction Localization}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {360--372}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_31}, doi = {10.1007/978-981-97-5131-0\_31}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LongYGA24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LuoDHGQW24, author = {Huiliang Luo and Guojian Deng and Riqian Hu and Ruiquan Ge and Feiwei Qin and Changmiao Wang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {CircMAN: Multi-channel Attention Networks Based on Feature Fusion for CircRNA-Binding Protein Site Prediction}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {169--181}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_14}, doi = {10.1007/978-981-97-5128-0\_14}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LuoDHGQW24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LuoZCSZY24, author = {Mai Luo and Yuansong Zeng and Jianing Chen and Ningyuan Shangguan and Wenhao Zhou and Yuedong Yang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Accurately Deciphering Novel Cell Type in Spatially Resolved Single-Cell Data Through Optimal Transport}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {107--118}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_10}, doi = {10.1007/978-981-97-5131-0\_10}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LuoZCSZY24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LvDZTJ24, author = {Xing Lv and Jie Deng and Weizhong Zhao and Xinhui Tu and Xingpeng Jiang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {A Hierarchical Classification Model for Annotating Antibacterial Biocide and Metal Resistance Genes via Fusing Global and Local Semantics}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {398--409}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_34}, doi = {10.1007/978-981-97-5131-0\_34}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LvDZTJ24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MaDZQ24, author = {Yantuanjin Ma and Xingli Deng and Hongqing Zhang and Yuan Qian}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Integrated Analysis of Autophagy-Related Genes Identifies Diagnostic Biomarkers and Immune Correlates in Preeclampsia}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {202--220}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_18}, doi = {10.1007/978-981-97-5131-0\_18}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MaDZQ24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/NguyenTYW24, author = {Phuc{-}Xuan{-}Quynh Nguyen and Hoai{-}Nhan Tran and Cheng Yan and Jianxin Wang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {A Deep Metric Learning Based Method for Predicting MiRNA-Disease Associations}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {262--273}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_21}, doi = {10.1007/978-981-97-5128-0\_21}, timestamp = {Wed, 24 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/NguyenTYW24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/NguyenWH24, author = {Thu Nguyen and Willy Wriggers and Jing He}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {A Data Set of Paired Structural Segments Between Protein Data Bank and AlphaFold {DB} for Medium-Resolution Cryo-EM Density Maps: {A} Gap in Overall Structural Quality}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {14956}, pages = {52--63}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5087-0\_5}, doi = {10.1007/978-981-97-5087-0\_5}, timestamp = {Sun, 08 Sep 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/NguyenWH24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/OuSLZTG24, author = {Yi Ou and Yaotong Song and Zhipeng Liu and Zhiming Zhang and Jun Tang and Shangce Gao}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Dendritic SE-ResNet Learning for Bioinformatic Classification}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {139--150}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_12}, doi = {10.1007/978-981-97-5128-0\_12}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/OuSLZTG24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/PangXXH24, author = {Yuhong Pang and Yantuan Xian and Yan Xiang and Yuxin Huang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Predictive Score-Guided Mixup for Medical Text Classification}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {237--249}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_19}, doi = {10.1007/978-981-97-5128-0\_19}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/PangXXH24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/PengCD24, author = {Wei Peng and Chuyue Chen and Wei Dai}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Patient Anticancer Drug Response Prediction Based on Single-Cell Deconvolution}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {14956}, pages = {40--51}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5087-0\_4}, doi = {10.1007/978-981-97-5087-0\_4}, timestamp = {Wed, 28 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/PengCD24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/PengDHLX24, author = {Xing Peng and Yuan Dang and Jingyun Huang and Shangyi Luo and Zhuang Xiong}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {{GSDRP:} Fusing Drug Sequence Features with Graph Features to Predict Drug Response}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {151--168}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_13}, doi = {10.1007/978-981-97-5128-0\_13}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/PengDHLX24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/PengJLYF24, author = {Xiaoqing Peng and Wenlong Jie and Zihao Li and Junjie You and Wentong Feng}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Noninvasive Diagnosis of Cancer Based on the Heterogeneity and Fragmentation Features of Cell-Free Mitochondrial {DNA}}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {423--433}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_36}, doi = {10.1007/978-981-97-5131-0\_36}, timestamp = {Fri, 02 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/PengJLYF24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/PengLDCFLL24, author = {Wei Peng and Jiangzhen Lin and Wei Dai and Gong Chen and Xiaodong Fu and Li Liu and Lijun Liu}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Hypergraph Representation Learning for Cancer Drug Response Prediction}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {339--349}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_29}, doi = {10.1007/978-981-97-5131-0\_29}, timestamp = {Thu, 25 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/PengLDCFLL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/PengZDXFLL24, author = {Wei Peng and Zhengnan Zhou and Wei Dai and Xinping Xu and Xiaodong Fu and Li Liu and Lijun Liu}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {{DGCL:} {A} Contrastive Learning Method for Predicting Cancer Driver Genes Based on Graph Diffusion}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {350--359}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_30}, doi = {10.1007/978-981-97-5131-0\_30}, timestamp = {Wed, 24 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/PengZDXFLL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/RahaLW24, author = {Rawshon Raha and Qiang Liu and Fang{-}Xiang Wu}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {An Ensemble Learning Model for Predicting Unseen TCR-Epitope Interactions}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {449--460}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_37}, doi = {10.1007/978-981-97-5128-0\_37}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/RahaLW24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/RenLALC24, author = {Linan Ren and Kaixin Li and Ying An and Yuan Liu and Xianlai Chen}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Feddaw: Dual Adaptive Weighted Federated Learning for Non-IID Medical Data}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {14956}, pages = {1--13}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5087-0\_1}, doi = {10.1007/978-981-97-5087-0\_1}, timestamp = {Wed, 28 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/RenLALC24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SahooJRPZ24, author = {Bikram Sahoo and Nikita Jinna and Padmashree Rida and Zandra Pinnix and Alex Zelikovsky}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Machine Learning-Driven Discovery of Quadruple-Negative Breast Cancer Subtypes from Gene Expression Data}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {182--195}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_15}, doi = {10.1007/978-981-97-5128-0\_15}, timestamp = {Fri, 02 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SahooJRPZ24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ShangLZLZL24, author = {Junliang Shang and Yahan Li and Xiaohan Zhang and Feng Li and Yuanyuan Zhang and Jin{-}Xing Liu}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {{CPSORCL:} {A} Cooperative Particle Swarm Optimization Method with Random Contrastive Learning for Interactive Feature Selection}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {327--338}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_28}, doi = {10.1007/978-981-97-5131-0\_28}, timestamp = {Fri, 26 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ShangLZLZL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ShiZWM24, author = {Zhiceng Shi and Fangfang Zhu and Changmiao Wang and Wenwen Min}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Spatial Gene Expression Prediction from Histology Images with STco}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {89--100}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_8}, doi = {10.1007/978-981-97-5128-0\_8}, timestamp = {Fri, 02 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ShiZWM24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SizovsSMRLCV24, author = {Andrejs Sizovs and Sandra Silina and Gatis Melkus and Peteris Rucevskis and Lelde Lace and Edgars Celms and Juris Viksna}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Exploration and Visualization Methods for Chromatin Interaction Data}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {101--113}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_9}, doi = {10.1007/978-981-97-5128-0\_9}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SizovsSMRLCV24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SunGL24, author = {Jialiang Sun and Jun Guo and Jian Liu}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {{CHASOS:} {A} Novel Deep Learning Approach for Chromatin Loop Predictions}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {250--261}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_20}, doi = {10.1007/978-981-97-5128-0\_20}, timestamp = {Fri, 02 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SunGL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/TangKXX24, author = {Zhan Tang and Xupeng Kou and Hongcheng Xue and Yuantian Xia}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Flat and Nested Protein Name Recognition Based on BioBERT and Biaffine Decoder}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {25--38}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_3}, doi = {10.1007/978-981-97-5128-0\_3}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/TangKXX24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/TangZW24, author = {Wuguo Tang and Qichang Zhao and Jianxin Wang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {{LLMDTA:} Improving Cold-Start Prediction in Drug-Target Affinity with Biological {LLM}}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {152--163}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_14}, doi = {10.1007/978-981-97-5131-0\_14}, timestamp = {Thu, 22 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/TangZW24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/TangZYZ24, author = {Guangyi Tang and Qingbao Zhang and Dengju Yao and Xiaojuan Zhan}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {LncRNA-Disease Association Prediction Based on Integrated Application of Matrix Decomposition and Graph Contrastive Learning}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {224--236}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_18}, doi = {10.1007/978-981-97-5128-0\_18}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/TangZYZ24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/TengYZL24, author = {Tianqi Teng and Feng Yang and Qiang Zhang and Juan Liu}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Variable-Length Promoter Strength Prediction Based on Graph Convolution}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {310--321}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_25}, doi = {10.1007/978-981-97-5128-0\_25}, timestamp = {Fri, 02 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/TengYZL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/VanJSL24, author = {Sau Van Nguyen Van and Hui Jiang and Feng Sha and Ye Li}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Early Prediction of {SGA-LGA} Fetus at the First Trimester Ending Through Weighted Voting Ensemble Learning Approach}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {383--397}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_33}, doi = {10.1007/978-981-97-5131-0\_33}, timestamp = {Thu, 22 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/VanJSL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangJWCZL24, author = {Shuang{-}Qing Wang and Cui{-}Na Jiao and Tian{-}Ru Wu and Xinchun Cui and Chun{-}Hou Zheng and Jin{-}Xing Liu}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Deep Hyper-Laplacian Regularized Self-representation Learning Based Structured Association Analysis for Brain Imaging Genetics}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {418--426}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_34}, doi = {10.1007/978-981-97-5128-0\_34}, timestamp = {Thu, 25 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangJWCZL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangLQLZ24, author = {Shilong Wang and Xiaobo Li and Wen Qu and Hongfei Lin and Yi{-}Jia Zhang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Hybrid Attention Knowledge Fusion Network for Automated Medical Code Assignment}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {298--309}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_24}, doi = {10.1007/978-981-97-5128-0\_24}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangLQLZ24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangM24, author = {Shaokai Wang and Bin Ma}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Novel Fine-Tuning Strategy on Pre-trained Protein Model Enhances {ACP} Functional Type Classification}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {371--382}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_30}, doi = {10.1007/978-981-97-5128-0\_30}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangM24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangW24, author = {Yixiao Wang and Ying Wang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {FunBGC: An Intelligent Framework for Fungal Biosynthetic Gene Cluster Identification}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {257--268}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_22}, doi = {10.1007/978-981-97-5131-0\_22}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangW24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangWCZC24, author = {Yaoyu Wang and Xiaohua Wan and Cheng Chen and Fa Zhang and Xuefeng Cui}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Central Feature Network Enables Accurate Detection of Both Small and Large Particles in Cryo-Electron Tomography}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {212--223}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_17}, doi = {10.1007/978-981-97-5128-0\_17}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangWCZC24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangYYYZDLSL24, author = {Mingkai Wang and Zekun Yin and Lifeng Yan and Yang Yang and Fangjin Zhu and Xiaohui Duan and Xin Li and Bertil Schmidt and Weiguo Liu}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {RabbitTrim: Highly Optimized Trimming of Illumina Sequencing Data on Multi-core Platforms}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {26--37}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_3}, doi = {10.1007/978-981-97-5131-0\_3}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangYYYZDLSL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangZW24, author = {Xuetao Wang and Qichang Zhao and Jianxin Wang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {FedKD-DTI: Drug-Target Interaction Prediction Based on Federated Knowledge Distillation}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {95--106}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_9}, doi = {10.1007/978-981-97-5131-0\_9}, timestamp = {Thu, 22 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangZW24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangZW24a, author = {Jinhui Wang and Xinyi Zhao and Jiayin Wang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {An Automatic Recommendation Method for Single-Cell {DNA} Variant Callers Based on Meta-Learning Framework}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {269--280}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_23}, doi = {10.1007/978-981-97-5131-0\_23}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangZW24a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WenFBXSM24, author = {Xinqiang Wen and Yugui Fu and Shenghui Bi and Ju Xiang and Xinliang Sun and Xiangmao Meng}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Subgraph-Aware Dynamic Attention Network for Drug Repositioning}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {303--314}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_26}, doi = {10.1007/978-981-97-5131-0\_26}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WenFBXSM24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WuJ24, author = {Jinting Wu and Haitao Jiang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Improved Inapproximability Gap and Approximation Algorithm for Scaffold Filling to Maximize Increased Duo-Preservations}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {14956}, pages = {76--88}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5087-0\_7}, doi = {10.1007/978-981-97-5087-0\_7}, timestamp = {Wed, 28 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WuJ24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XiTP24, author = {Peng Xi and Wenjuan Tang and Shaoliang Peng}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Fighting Fire with Fire: Medical {AI} Models Defend Against Backdoor Attacks via Self-learning}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {347--358}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_28}, doi = {10.1007/978-981-97-5128-0\_28}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/XiTP24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XiangCMZZL24, author = {Ju Xiang and Shengkai Chen and Xiangmao Meng and Ruiqing Zheng and Ying Zheng and Min Li}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {{MSMK:} Multiscale Module Kernel for Identifying Disease-Related Genes}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {13--24}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_2}, doi = {10.1007/978-981-97-5128-0\_2}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/XiangCMZZL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XieZW24, author = {Chenliang Xie and Haochen Zhao and Jianxin Wang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {{DVMPDC:} {A} Deep Learning Model Based on Dual-View Representation and Multi-Strategy Pooling for Predicting Synergistic Drug Combinations}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {445--457}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_38}, doi = {10.1007/978-981-97-5131-0\_38}, timestamp = {Thu, 22 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/XieZW24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XueZWM24, author = {Shuailin Xue and Fangfang Zhu and Changmiao Wang and Wenwen Min}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {stEnTrans: Transformer-Based Deep Learning for Spatial Transcriptomics Enhancement}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {63--75}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_6}, doi = {10.1007/978-981-97-5128-0\_6}, timestamp = {Fri, 02 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/XueZWM24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YanLFLL24, author = {Chaokun Yan and Jiabao Li and Qi Feng and Junwei Luo and Huimin Luo}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {ResDeepGS: {A} Deep Learning-Based Method for Crop Phenotype Prediction}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {470--481}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_40}, doi = {10.1007/978-981-97-5131-0\_40}, timestamp = {Thu, 22 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YanLFLL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YanYLYLL24, author = {Chaokun Yan and Menghan Yin and Wenjuan Liang and Haicao Yan and Huimin Luo and Junwei Luo}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Enhancing Privacy and Preserving Accuracy in Medical Image Classification with Limited Labeled Samples}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {383--394}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_31}, doi = {10.1007/978-981-97-5128-0\_31}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YanYLYLL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YanYLYZZDSL24, author = {Lifeng Yan and Zekun Yin and Jinjin Li and Yang Yang and Tong Zhang and Fangjin Zhu and Xiaohui Duan and Bertil Schmidt and Weiguo Liu}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {RabbitSAlign: Accelerating Short-Read Alignment for {CPU-GPU} Heterogeneous Platforms}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {83--94}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_8}, doi = {10.1007/978-981-97-5131-0\_8}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YanYLYZZDSL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YaoWZ24, author = {Dengju Yao and Yuehu Wu and Xiaojuan Zhan}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {A Graph Transformer-Based Method for Predicting LncRNA-Disease Associations Using Matrix Factorization and Automatic Meta-Path Generation}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {176--188}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_16}, doi = {10.1007/978-981-97-5131-0\_16}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YaoWZ24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YiX24, author = {Sichen Yi and MinZhu Xie}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {FCMEDriver: Identifying Cancer Driver Gene by Combining Mutual Exclusivity of Embedded Features and Optimized Mutation Frequency Score}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {14956}, pages = {130--141}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5087-0\_11}, doi = {10.1007/978-981-97-5087-0\_11}, timestamp = {Sun, 08 Sep 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YiX24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhaiYHWG24, author = {Haojie Zhai and Yusen Ye and Yuxuan Hu and Lanying Wang and Lin Gao}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Exploring Hierarchical Structures of Cell Types in scRNA-seq Data}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {1--13}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_1}, doi = {10.1007/978-981-97-5131-0\_1}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhaiYHWG24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhanSZLHY24, author = {Zehao Zhan and Yuping Sun and Bilian Zhu and Jie Ling and Manshi Hu and Shun Yao}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Multi-scale Mean Teacher for Unsupervised Cross-Modality Abdominal Organ Segmentation with Limited Annotations}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {291--302}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_25}, doi = {10.1007/978-981-97-5131-0\_25}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhanSZLHY24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangFPXPG24, author = {Bailu Zhang and Shichao Feng and Manushi Parajuli and Yi Xiong and Chongle Pan and Xuan Guo}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {SEMQuant: Extending Sipros-Ensemble with Match-Between-Runs for Comprehensive Quantitative Metaproteomics}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {14956}, pages = {102--115}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5087-0\_9}, doi = {10.1007/978-981-97-5087-0\_9}, timestamp = {Wed, 28 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhangFPXPG24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangL24, author = {Guoqing Zhang and Yang Li}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {A Geometric Algorithm for Blood Vessel Reconstruction from Skeletal Representation}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {114--126}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_10}, doi = {10.1007/978-981-97-5128-0\_10}, timestamp = {Fri, 02 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhangL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangLL24, author = {Pei Zhang and Zhihong Liu and Liangliang Liu}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {A Hybrid Feature Fusion Network for Predicting {HER2} Status on {H} {\&}E-Stained Histopathology Images}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {38--46}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_4}, doi = {10.1007/978-981-97-5131-0\_4}, timestamp = {Fri, 02 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhangLL24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangQXY24, author = {Xiang Zhang and Chenliang Qian and Jie Xia and Fan Yang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {{MOL-MOE:} Learning Drug Molecular Characterization Based on Mixture of Expert Mechanism}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {233--244}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_20}, doi = {10.1007/978-981-97-5131-0\_20}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhangQXY24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangYJGLT24, author = {Mingya Zhang and Yue Yu and Sun Jin and Limei Gu and Tingsheng Lin and Xianping Tao}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {{VM-UNET-V2:} Rethinking Vision Mamba UNet for Medical Image Segmentation}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {335--346}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_27}, doi = {10.1007/978-981-97-5128-0\_27}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhangYJGLT24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangYZLDTZ24, author = {Fenghui Zhang and Kuo Yang and Chenqian Zhao and Haixu Li and Xin Dong and Haoyu Tian and Xuezhong Zhou}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Benchmarking Biomedical Relation Knowledge in Large Language Models}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {482--495}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_41}, doi = {10.1007/978-981-97-5131-0\_41}, timestamp = {Thu, 22 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhangYZLDTZ24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhengX24, author = {Ying Zheng and Shibo Xu}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Predicting Frequencies of Drug Side Effects Using Graph Attention Networks with Multiple Features}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, pages = {14--25}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0\_2}, doi = {10.1007/978-981-97-5131-0\_2}, timestamp = {Fri, 02 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhengX24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhongYYW24, author = {Jiancheng Zhong and Chen Yang and Maoqi Yuan and Shaokai Wang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {PrSMBooster: Improving the Accuracy of Top-Down Proteoform Characterization Using Deep Learning Rescoring Models}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {14956}, pages = {116--129}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5087-0\_10}, doi = {10.1007/978-981-97-5087-0\_10}, timestamp = {Wed, 28 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhongYYW24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhouJWGS24, author = {Benjie Zhou and Hongyang Jiang and Yuezhu Wang and Yujie Gu and Huiyan Sun}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {ScMOGAE: {A} Graph Convolutional Autoencoder-Based Multi-omics Data Integration Framework for Single-Cell Clustering}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {322--334}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_26}, doi = {10.1007/978-981-97-5128-0\_26}, timestamp = {Thu, 22 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhouJWGS24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhouKWW24, author = {Jiancun Zhou and Hulin Kuang and Yahui Wang and Jianxin Wang}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Hybrid {CNN} and Low-Complexity Transformer Network with Attention-Based Feature Fusion for Predicting Lung Cancer Tumor After Neoadjuvant Chemoimmunotherapy}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {408--417}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_33}, doi = {10.1007/978-981-97-5128-0\_33}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhouKWW24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhuangXPZWY24, author = {Jinhu Zhuang and Linyan Xie and Chenxi Peng and Guangjian Zeng and Ming Wu and Xiaxia Yu}, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Continuous Identification of Sepsis-Associated Acute Heart Failure Patients: An Integrated LSTM-Based Algorithm}, booktitle = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, pages = {483--494}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0\_40}, doi = {10.1007/978-981-97-5128-0\_40}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhuangXPZWY24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2024-1, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {I}}, series = {Lecture Notes in Computer Science}, volume = {14954}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5128-0}, doi = {10.1007/978-981-97-5128-0}, isbn = {978-981-97-5127-3}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2024-1.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2024-2, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {II}}, series = {Lecture Notes in Computer Science}, volume = {14955}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5131-0}, doi = {10.1007/978-981-97-5131-0}, isbn = {978-981-97-5130-3}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2024-2.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2024-3, editor = {Wei Peng and Zhipeng Cai and Pavel Skums}, title = {Bioinformatics Research and Applications - 20th International Symposium, {ISBRA} 2024, Kunming, China, July 19-21, 2024, Proceedings, Part {III}}, series = {Lecture Notes in Computer Science}, volume = {14956}, publisher = {Springer}, year = {2024}, url = {https://doi.org/10.1007/978-981-97-5087-0}, doi = {10.1007/978-981-97-5087-0}, isbn = {978-981-97-5086-3}, timestamp = {Wed, 28 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2024-3.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AbbasiATDA23, author = {Ahtisham Fazeel Abbasi and Muhammad Nabeel Asim and Johan Trygg and Andreas Dengel and Sheraz Ahmed}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Deep Learning Architectures for the Prediction of YY1-Mediated Chromatin Loops}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {72--84}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_6}, doi = {10.1007/978-981-99-7074-2\_6}, timestamp = {Tue, 10 Oct 2023 15:52:57 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AbbasiATDA23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AliCP23, author = {Sarwan Ali and Pin{-}Yu Chen and Murray Patterson}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Unveiling the Robustness of Machine Learning Models in Classifying {COVID-19} Spike Sequences}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {1--15}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_1}, doi = {10.1007/978-981-99-7074-2\_1}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AliCP23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AliCP23a, author = {Sarwan Ali and Prakash Chourasia and Murray Patterson}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {PDB2Vec: Using 3D Structural Information for Improved Protein Analysis}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {376--386}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_29}, doi = {10.1007/978-981-99-7074-2\_29}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AliCP23a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AliMCP23, author = {Sarwan Ali and Haris Mansoor and Prakash Chourasia and Murray Patterson}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Hist2Vec: Kernel-Based Embeddings for Biological Sequence Classification}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {387--397}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_30}, doi = {10.1007/978-981-99-7074-2\_30}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AliMCP23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AliSKP23, author = {Sarwan Ali and Usama Sardar and Imdadullah Khan and Murray Patterson}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Efficient Sequence Embedding for SARS-CoV-2 Variants Classification}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {16--30}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_2}, doi = {10.1007/978-981-99-7074-2\_2}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/AliSKP23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AnXG23, author = {Ying An and Anxuan Xiong and Lin Guo}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {{DCNN:} Dual-Level Collaborative Neural Network for Imbalanced Heart Anomaly Detection}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {398--408}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_31}, doi = {10.1007/978-981-99-7074-2\_31}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AnXG23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AndersenBFFMS23, author = {Jakob L. Andersen and Sissel Banke and Rolf Fagerberg and Christoph Flamm and Daniel Merkle and Peter F. Stadler}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {On the Realisability of Chemical Pathways}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {409--419}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_32}, doi = {10.1007/978-981-99-7074-2\_32}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AndersenBFFMS23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BasakSDHMPSWSR23, author = {Joyanta Basak and Ahmed Soliman and Nachiket Deo and Kenneth Haase and Anup Mathur and Krista Park and Rebecca C. Steorts and Daniel Weinberg and Sartaj Sahni and Sanguthevar Rajasekaran}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {On Computing the Jaro Similarity Between Two Strings}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {31--44}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_3}, doi = {10.1007/978-981-99-7074-2\_3}, timestamp = {Tue, 20 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/BasakSDHMPSWSR23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BiJYZZW23, author = {Xuehua Bi and Chunyang Jiang and Cheng Yan and Kai Zhao and Linlin Zhang and Jianxin Wang}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Identifying miRNA-Disease Associations Based on Simple Graph Convolution with DropMessage and Jumping Knowledge}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {45--57}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_4}, doi = {10.1007/978-981-99-7074-2\_4}, timestamp = {Mon, 26 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/BiJYZZW23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BlekerGL23, author = {Carissa Bleker and Stephen K. Grady and Michael A. Langston}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {A Brief Study of Gene Co-expression Thresholding Algorithms}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {420--430}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_33}, doi = {10.1007/978-981-99-7074-2\_33}, timestamp = {Sat, 14 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BlekerGL23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BolteauBDG23, author = {Mathieu Bolteau and J{\'{e}}r{\'{e}}mie Bourdon and Laurent David and Carito Guziolowski}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Inferring Boolean Networks from Single-Cell Human Embryo Datasets}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {431--441}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_34}, doi = {10.1007/978-981-99-7074-2\_34}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BolteauBDG23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChourasiaMAP23, author = {Prakash Chourasia and Taslim Murad and Sarwan Ali and Murray Patterson}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Enhancing t-SNE Performance for Biological Sequencing Data Through Kernel Selection}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {442--452}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_35}, doi = {10.1007/978-981-99-7074-2\_35}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChourasiaMAP23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/EriksenAFM23, author = {Casper Asbj{\o}rn Eriksen and Jakob Lykke Andersen and Rolf Fagerberg and Daniel Merkle}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Reconciling Inconsistent Molecular Structures from Biochemical Databases}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {58--71}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_5}, doi = {10.1007/978-981-99-7074-2\_5}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/EriksenAFM23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/FarooqNJZ23, author = {Hafsa Farooq and Daniel Novikov and Akshay Juyal and Alexander Zelikovsky}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Genetic Algorithm with Evolutionary Jumps}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {453--463}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_36}, doi = {10.1007/978-981-99-7074-2\_36}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/FarooqNJZ23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GuanAGW23, author = {Yuxia Guan and Ying An and Fengyi Guo and Jianxin Wang}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {MPFNet: {ECG} Arrhythmias Classification Based on Multi-perspective Feature Fusion}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {85--96}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_7}, doi = {10.1007/978-981-99-7074-2\_7}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GuanAGW23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HossainRLPFW23, author = {Md. Tofazzal Hossain and Md. Selim Reza and Xuelei Li and Yin Peng and Shengzhong Feng and Yanjie Wei}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {{PCPI:} Prediction of circRNA and Protein Interaction Using Machine Learning Method}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {97--106}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_8}, doi = {10.1007/978-981-99-7074-2\_8}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HossainRLPFW23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HouSLLZ23, author = {Xiaodi Hou and Guoming Sang and Zhi Liu and Xiaobo Li and Yijia Zhang}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Radiology Report Generation via Visual Recalibration and Context Gating-Aware}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {107--119}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_9}, doi = {10.1007/978-981-99-7074-2\_9}, timestamp = {Thu, 01 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/HouSLLZ23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/KatrielMKZSS23, author = {Guy Katriel and Udi Mahanaymi and Christoph Koutschan and Doron Zeilberger and Mike Steel and Sagi Snir}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Using Generating Functions to Prove Additivity of Gene-Neighborhood Based Phylogenetics - Extended Abstract}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {120--135}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_10}, doi = {10.1007/978-981-99-7074-2\_10}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/KatrielMKZSS23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LeiHYCWWL23, author = {Hongyang Lei and Huazhen Huang and Bokai Yang and Guosheng Cui and Ruxin Wang and Dan Wu and Ye Li}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {{TCSA:} {A} Text-Guided Cross-View Medical Semantic Alignment Framework for Adaptive Multi-view Visual Representation Learning}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {136--149}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_11}, doi = {10.1007/978-981-99-7074-2\_11}, timestamp = {Tue, 23 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LeiHYCWWL23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiZWL23, author = {Yulong Li and Hongming Zhu and Xiaowen Wang and Qin Liu}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {HetBiSyn: Predicting Anticancer Synergistic Drug Combinations Featuring Bi-perspective Drug Embedding with Heterogeneous Data}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {464--475}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_37}, doi = {10.1007/978-981-99-7074-2\_37}, timestamp = {Sat, 14 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiZWL23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LohneysenSVYLHS23, author = {Sarah von L{\"{o}}hneysen and Thomas Spicher and Yuliia Varenyk and Hua{-}Ting Yao and Ronny Lorenz and Ivo L. Hofacker and Peter F. Stadler}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Phylogenetic Information as Soft Constraints in {RNA} Secondary Structure Prediction}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {267--279}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_21}, doi = {10.1007/978-981-99-7074-2\_21}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LohneysenSVYLHS23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LuanHHLJHDYGCN23, author = {Haijing Luan and Taiyuan Hu and Jifang Hu and Ruilin Li and Detao Ji and Jiayin He and Xiaohong Duan and Chunyan Yang and Yajun Gao and Fan Chen and Beifang Niu}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Multi-class Cancer Classification of Whole Slide Images Through Transformer and Multiple Instance Learning}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {150--164}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_12}, doi = {10.1007/978-981-99-7074-2\_12}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LuanHHLJHDYGCN23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MaZSCL23, author = {Huidong Ma and Cheng Zhong and Hui Sun and Danyang Chen and Haixiang Lin}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {ricME: Long-Read Based Mobile Element Variant Detection Using Sequence Realignment and Identity Calculation}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {165--177}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_13}, doi = {10.1007/978-981-99-7074-2\_13}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MaZSCL23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MelkusSSRLCV23, author = {Gatis Melkus and Sandra Silina and Andrejs Sizovs and Peteris Rucevskis and Lelde Lace and Edgars Celms and Juris Viksna}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Clique-Based Topological Characterization of Chromatin Interaction Hubs}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {476--486}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_38}, doi = {10.1007/978-981-99-7074-2\_38}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MelkusSSRLCV23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/QiaoLYDW23, author = {Tian{-}Jing Qiao and Feng Li and Shasha Yuan and Ling{-}Yun Dai and Juan Wang}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {scGASI: {A} Graph Autoencoder-Based Single-Cell Integration Clustering Method}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {178--189}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_14}, doi = {10.1007/978-981-99-7074-2\_14}, timestamp = {Wed, 24 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/QiaoLYDW23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/RenLLLS23, author = {Qianqian Ren and Yahan Li and Feng Li and Jin{-}Xing Liu and Junliang Shang}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {{ABCAE:} Artificial Bee Colony Algorithm with Adaptive Exploitation for Epistatic Interaction Detection}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {190--201}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_15}, doi = {10.1007/978-981-99-7074-2\_15}, timestamp = {Wed, 24 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/RenLLLS23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/RossignoloC23, author = {Enrico Rossignolo and Matteo Comin}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {{USTAR:} Improved Compression of k-mer Sets with Counters Using de Bruijn Graphs}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {202--213}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_16}, doi = {10.1007/978-981-99-7074-2\_16}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/RossignoloC23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SaghaianSIZ23, author = {Hossein Saghaian and Pavel Skums and Yurij Ionov and Alex Zelikovsky}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Graph-Based Motif Discovery in Mimotope Profiles of Serum Antibody Repertoire}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {214--226}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_17}, doi = {10.1007/978-981-99-7074-2\_17}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SaghaianSIZ23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SahooAPZ23, author = {Bikram Sahoo and Temitope Adeyeha and Zandra Pinnix and Alex Zelikovsky}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Exploring Racial Disparities in Triple-Negative Breast Cancer: Insights from Feature Selection Algorithms}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {487--497}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_39}, doi = {10.1007/978-981-99-7074-2\_39}, timestamp = {Sat, 14 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SahooAPZ23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SahooPZ23, author = {Bikram Sahoo and Zandra Pinnix and Alex Zelikovsky}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Deep Learning Reveals Biological Basis of Racial Disparities in Quadruple-Negative Breast Cancer}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {498--508}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_40}, doi = {10.1007/978-981-99-7074-2\_40}, timestamp = {Sat, 14 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SahooPZ23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SalgadoFF23, author = {Andr{\'{e}} Salgado and Francisco Fernandes and Ana Teresa Freitas}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {{CSA-MEM:} Enhancing Circular {DNA} Multiple Alignment Through Text Indexing Algorithms}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {509--517}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_41}, doi = {10.1007/978-981-99-7074-2\_41}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SalgadoFF23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SardarAASBKP23, author = {Usama Sardar and Sarwan Ali and Muhammad Sohaib Ayub and Muhammad Shoaib and Khurram Bashir and Imdadullah Khan and Murray Patterson}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Sequence-Based Nanobody-Antigen Binding Prediction}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {227--240}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_18}, doi = {10.1007/978-981-99-7074-2\_18}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SardarAASBKP23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SiqueiraAOJFD23, author = {Gabriel Siqueira and Alexsandro Oliveira Alexandrino and Andre Rodrigues Oliveira and G{\'{e}}raldine Jean and Guillaume Fertin and Zanoni Dias}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Approximating Rearrangement Distances with Replicas and Flexible Intergenic Regions}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {241--254}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_19}, doi = {10.1007/978-981-99-7074-2\_19}, timestamp = {Fri, 27 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SiqueiraAOJFD23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SouzaML23, author = {Michael Souza and Nilton Maia and Carlile Lavor}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {The Ordered Covering Problem in Distance Geometry}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {255--266}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_20}, doi = {10.1007/978-981-99-7074-2\_20}, timestamp = {Sat, 14 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SouzaML23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SturtzAZLQ23, author = {Jordan Sturtz and Richard Annan and Binhai Zhu and Xiaowen Liu and Letu Qingge}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {A Convolutional Denoising Autoencoder for Protein Scaffold Filling}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {518--529}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_42}, doi = {10.1007/978-981-99-7074-2\_42}, timestamp = {Sat, 14 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SturtzAZLQ23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/TayebiJZP23, author = {Zahra Tayebi and Akshay Juyal and Alexander Zelikovsky and Murray Patterson}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Simulating Tumor Evolution from scDNA-Seq as an Accumulation of both SNVs and CNAs}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {530--540}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_43}, doi = {10.1007/978-981-99-7074-2\_43}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/TayebiJZP23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangKLW23, author = {Tai{-}Ge Wang and Xiang{-}Zhen Kong and Shengjun Li and Juan Wang}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {{CHLPCA:} Correntropy-Based Hypergraph Regularized Sparse {PCA} for Single-Cell Type Identification}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {541--551}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_44}, doi = {10.1007/978-981-99-7074-2\_44}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangKLW23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangZM23, author = {Shaokai Wang and Ming Zhu and Bin Ma}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {NeoMS: Identification of Novel {MHC-I} Peptides with Tandem Mass Spectrometry}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {280--291}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_22}, doi = {10.1007/978-981-99-7074-2\_22}, timestamp = {Thu, 19 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangZM23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XuKBW23, author = {Shuo Xu and Liping Kang and Xingyu Bi and Xiaohui Wu}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Integrative Analysis of Gene Expression and Alternative Polyadenylation from Single-Cell RNA-seq Data}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {312--324}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_24}, doi = {10.1007/978-981-99-7074-2\_24}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/XuKBW23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XuTJWZZ23, author = {Huixiu Xu and Xin Tong and Haitao Jiang and Lusheng Wang and Binhai Zhu and Daming Zhu}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {On Sorting by Flanked Transpositions}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {292--311}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_23}, doi = {10.1007/978-981-99-7074-2\_23}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/XuTJWZZ23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YangLZHZ23, author = {Zhidong Yang and Hongjia Li and Dawei Zang and Renmin Han and Fa Zhang}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {SaID: Simulation-Aware Image Denoising Pre-trained Model for Cryo-EM Micrographs}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {325--336}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_25}, doi = {10.1007/978-981-99-7074-2\_25}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YangLZHZ23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZamanB23, author = {Sumaira Zaman and Mukul S. Bansal}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Reducing the Impact of Domain Rearrangement on Sequence Alignment and Phylogeny Reconstruction}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {337--350}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_26}, doi = {10.1007/978-981-99-7074-2\_26}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZamanB23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangHJXW23, author = {Jingjing Zhang and Md. Tofazzal Hossain and Zhen Ju and Wenhui Xi and Yanjie Wei}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Identification and Functional Annotation of circRNAs in Neuroblastoma Based on Bioinformatics}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {351--363}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_27}, doi = {10.1007/978-981-99-7074-2\_27}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhangHJXW23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangLTZ23, author = {Yan Zhang and Xin Liu and Panrui Tang and Zuping Zhang}, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {{SGMDD:} Subgraph Neural Network-Based Model for Analyzing Functional Connectivity Signatures of Major Depressive Disorder}, booktitle = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, pages = {364--375}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2\_28}, doi = {10.1007/978-981-99-7074-2\_28}, timestamp = {Wed, 04 Sep 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhangLTZ23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2023, editor = {Xuan Guo and Serghei Mangul and Murray Patterson and Alexander Zelikovsky}, title = {Bioinformatics Research and Applications - 19th International Symposium, {ISBRA} 2023, Wroc{\l}aw, Poland, October 9-12, 2023, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {14248}, publisher = {Springer}, year = {2023}, url = {https://doi.org/10.1007/978-981-99-7074-2}, doi = {10.1007/978-981-99-7074-2}, isbn = {978-981-99-7073-5}, timestamp = {Tue, 10 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2023.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AlexandrinoOJFD22, author = {Alexsandro Oliveira Alexandrino and Andre Rodrigues Oliveira and G{\'{e}}raldine Jean and Guillaume Fertin and Ulisses Dias and Zanoni Dias}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {Transposition Distance Considering Intergenic Regions for Unbalanced Genomes}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {100--113}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_10}, doi = {10.1007/978-3-031-23198-8\_10}, timestamp = {Tue, 31 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/AlexandrinoOJFD22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DengL22, author = {Juntao Deng and Min Liu}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {Deep Learning-Enhanced {MHC-II} Presentation Prediction and Peptidome Deconvolution}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {180--191}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_17}, doi = {10.1007/978-3-031-23198-8\_17}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/DengL22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GoldenbergSA22, author = {Meir Goldenberg and Sagi Snir and Adi Akavia}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {Private Epigenetic PaceMaker Detector Using Homomorphic Encryption - Extended Abstract}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {52--61}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_6}, doi = {10.1007/978-3-031-23198-8\_6}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/GoldenbergSA22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HuQTZLZ22, author = {Dongzheng Hu and Wubin Qu and Fan Tong and Xiangwen Zheng and Jiangyu Li and Dongsheng Zhao}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {An Efficient and User-Friendly Software for {PCR} Primer Design for Detection of Highly Variable Bacteria}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {138--147}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_13}, doi = {10.1007/978-3-031-23198-8\_13}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/HuQTZLZ22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HuangXWP22, author = {An Huang and Xiaolan Xie and Xiaoqi Wang and Shaoliang Peng}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {A Multimodal Data Fusion-Based Deep Learning Approach for Drug-Drug Interaction Prediction}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {275--285}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_25}, doi = {10.1007/978-3-031-23198-8\_25}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/HuangXWP22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/JuyalHNGZ22, author = {Akshay Juyal and Roya Hosseini and Daniel Novikov and Mark Grinshpon and Alex Zelikovsky}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {Entropy Based Clustering of Viral Sequences}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {369--380}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_33}, doi = {10.1007/978-3-031-23198-8\_33}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/JuyalHNGZ22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiLSLL22, author = {Han Li and Feng Li and Junliang Shang and Xikui Liu and Yan Li}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {A Network-Based Voting Method for Identification and Prioritization of Personalized Cancer Driver Genes}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {148--158}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_14}, doi = {10.1007/978-3-031-23198-8\_14}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiLSLL22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiZLWL22, author = {Xiaobo Li and Yijia Zhang and Xingwang Li and Jian Wang and Mingyu Lu}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {{NIDN:} Medical Code Assignment via Note-Code Interaction Denoising Network}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {62--74}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_7}, doi = {10.1007/978-3-031-23198-8\_7}, timestamp = {Sun, 16 Apr 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiZLWL22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuDGYW22, author = {Shuyue Liu and Junwen Duan and Feng Gong and Hailin Yue and Jianxin Wang}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {Fusing Label Relations for Chinese {EMR} Named Entity Recognition with Machine Reading Comprehension}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {41--51}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_5}, doi = {10.1007/978-3-031-23198-8\_5}, timestamp = {Tue, 17 Oct 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiuDGYW22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuDSL22, author = {Jingyi Liu and I. Duan and Santi Santichaivekin and Ran Libeskind{-}Hadas}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {Distance Profiles of Optimal {RNA} Foldings}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {315--329}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_29}, doi = {10.1007/978-3-031-23198-8\_29}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiuDSL22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuZYCL22, author = {Da Liu and Yi{-}Jia Zhang and Ming Yang and Fei Chen and Mingyu Lu}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {Gaussian-Enhanced Representation Model for Extracting Protein-Protein Interactions Affected by Mutations}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {303--314}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_28}, doi = {10.1007/978-3-031-23198-8\_28}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiuZYCL22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MwanikiP22, author = {Njagi Moses Mwaniki and Nadia Pisanti}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {Optimal Sequence Alignment to ED-Strings}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {204--216}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_19}, doi = {10.1007/978-3-031-23198-8\_19}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/MwanikiP22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/PandaPR22, author = {Abhinandan Panda and Srinivas Pinisetty and Partha S. Roop}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {Policy-Based Hypertension Monitoring Using Formal Runtime Verification Monitors}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {169--179}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_16}, doi = {10.1007/978-3-031-23198-8\_16}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/PandaPR22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/QiaoYSL22, author = {Qian Qiao and Shasha Yuan and Junliang Shang and Jin{-}Xing Liu}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {A Tensor Robust Model Based on Enhanced Tensor Nuclear Norm and Low-Rank Constraint for Multi-view Cancer Genomics Data}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {381--388}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_34}, doi = {10.1007/978-3-031-23198-8\_34}, timestamp = {Tue, 25 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/QiaoYSL22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ShenGLGL22, author = {Yi Shen and Ying{-}Lian Gao and Shu{-}Zhen Li and Boxin Guan and Jin{-}Xing Liu}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {A Locality-Constrained Linear Coding-Based Ensemble Learning Framework for Predicting Potentially Disease-Associated MiRNAs}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {295--302}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_27}, doi = {10.1007/978-3-031-23198-8\_27}, timestamp = {Tue, 25 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ShenGLGL22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ShengYHD22, author = {Yu Sheng and Shengyi Yang and Huirong Hu and Guihua Duan}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {Research on the Prediction Method of Disease Classification Based on Imaging Features}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {75--87}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_8}, doi = {10.1007/978-3-031-23198-8\_8}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ShengYHD22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SrivatsaLS22, author = {Arjun Srivatsa and Haoyun Lei and Russell Schwartz}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {A Clonal Evolution Simulator for Planning Somatic Evolution Studies}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {229--242}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_21}, doi = {10.1007/978-3-031-23198-8\_21}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/SrivatsaLS22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/TamazianKKPANKP22, author = {Gaik Tamazian and Andrey B. Komissarov and Dmitry Kobak and Dmitry Polyakov and Evgeny Andronov and Sergei Nechaev and Sergey Kryzhevich and Yuri Porozov and Eugene Stepanov}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {t-SNE Highlights Phylogenetic and Temporal Patterns of SARS-CoV-2 Spike and Nucleocapsid Protein Evolution}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {255--262}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_23}, doi = {10.1007/978-3-031-23198-8\_23}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/TamazianKKPANKP22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangGWSL22, author = {Ying Wang and Ying{-}Lian Gao and Juan Wang and Junliang Shang and Jin{-}Xing Liu}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {{MLMVFE:} {A} Machine Learning Approach Based on Muli-view Features Extraction for Drug-Disease Associations Prediction}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {1--8}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_1}, doi = {10.1007/978-3-031-23198-8\_1}, timestamp = {Tue, 25 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangGWSL22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangLMPW22, author = {Zhichao Wang and Xuelei Li and Jintao Meng and Yi Pan and Yanjie Wei}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {Simulating Spiking Neural Networks Based on SW26010pro}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {356--368}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_32}, doi = {10.1007/978-3-031-23198-8\_32}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/WangLMPW22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangLSDZW22, author = {Zhen{-}Chang Wang and Jin{-}Xing Liu and Junliang Shang and Ling{-}Yun Dai and Chun{-}Hou Zheng and Juan Wang}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {{ARGLRR:} An Adjusted Random Walk Graph Regularization Sparse Low-Rank Representation Method for Single-Cell RNA-Sequencing Data Clustering}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {126--137}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_12}, doi = {10.1007/978-3-031-23198-8\_12}, timestamp = {Tue, 25 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangLSDZW22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangW22, author = {Lei Wang and Yan Wang}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {GNN-Dom: An Unsupervised Method for Protein Domain Partition via Protein Contact Map}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {286--294}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_26}, doi = {10.1007/978-3-031-23198-8\_26}, timestamp = {Mon, 01 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangW22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XiaoWLP22, author = {Xia Xiao and Xiaoqi Wang and Shengyun Liu and Shaoliang Peng}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {{MPCDDI:} {A} Secure Multiparty Computation-Based Deep Learning Framework for Drug-Drug Interaction Predictions}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {263--274}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_24}, doi = {10.1007/978-3-031-23198-8\_24}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/XiaoWLP22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XingLCZZ22, author = {Tian{-}Yi Xing and Xiao{-}Xin Li and Zhi{-}Jie Chen and Xi{-}Yu Zheng and Fan Zhang}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {Effectively Training {MRI} Reconstruction Network via Sequentially Using Undersampled k-Space Data with Very Low Frequency Gaps}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {30--40}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_4}, doi = {10.1007/978-3-031-23198-8\_4}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/XingLCZZ22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XuOGGZHG22, author = {Zhenda Xu and Jiazi Ouyang and Qiang Gao and Aiqian Gan and Qihua Zhou and Jiahao Hu and Song Guo}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {2D Photogrammetry Image of Adolescent Idiopathic Scoliosis Screening Using Deep Learning}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {330--342}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_30}, doi = {10.1007/978-3-031-23198-8\_30}, timestamp = {Sun, 15 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/XuOGGZHG22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YangZYDZC22, author = {Bokai Yang and Ying Nan Zuo and Shunxiang Yang and Genqiang Deng and Suisong Zhu and Yunpeng Cai}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {M-US-EMRs: {A} Multi-modal Data Fusion Method of Ultrasonic Images and Electronic Medical Records Used for Screening of Coronary Heart Disease}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {88--99}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_9}, doi = {10.1007/978-3-031-23198-8\_9}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/YangZYDZC22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YordanovDGKW22, author = {Boyan Yordanov and Sara{-}Jane Dunn and Colin Gravill and Hillel Kugler and Christoph M. Wintersteiger}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {An SMT-Based Framework for Reasoning About Discrete Biological Models}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {114--125}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_11}, doi = {10.1007/978-3-031-23198-8\_11}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/YordanovDGKW22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YuDJW22, author = {Ying Yu and Junwen Duan and Han Jiang and Jian{-}Xin Wang}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {Automatic {ICD} Coding Based on Multi-granularity Feature Fusion}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {19--29}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_3}, doi = {10.1007/978-3-031-23198-8\_3}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/YuDJW22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangXLDRCW22, author = {Haodi Zhang and Chenyu Xu and Peirou Liang and Ke Duan and Hao Ren and Weibin Cheng and Kaishun Wu}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {{MMLN:} Leveraging Domain Knowledge for Multimodal Diagnosis}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {192--203}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_18}, doi = {10.1007/978-3-031-23198-8\_18}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ZhangXLDRCW22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangXLP22, author = {Xinglong Zhang and Peng Xi and Wenjuan Liu and Shaoliang Peng}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {EMRShareChain: {A} Privacy-Preserving {EMR} Sharing System Model Based on the Consortium Blockchain}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {343--355}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_31}, doi = {10.1007/978-3-031-23198-8\_31}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ZhangXLP22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhongCQWXZ22, author = {Jiancheng Zhong and Pan Cui and Zuohang Qu and Liuping Wang and Qiu Xiao and Yihong Zhu}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {Prediction of Drug-Disease Relationship on Heterogeneous Networks Based on Graph Convolution}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {243--254}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_22}, doi = {10.1007/978-3-031-23198-8\_22}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ZhongCQWXZ22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhouZCPL22, author = {Peixuan Zhou and Yi{-}Jia Zhang and Fei Chen and Kuo Pang and Mingyu Lu}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {Heterogeneous {PPI} Network Representation Learning for Protein Complex Identification}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {217--228}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_20}, doi = {10.1007/978-3-031-23198-8\_20}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhouZCPL22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhuPLMP22, author = {Xiaoshu Zhu and Liyuan Pang and Wei Lan and Shuang Meng and Xiaoqing Peng}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {STgcor: {A} Distribution-Based Correlation Measurement Method for Spatial Transcriptome Data}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {9--18}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_2}, doi = {10.1007/978-3-031-23198-8\_2}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhuPLMP22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZouSLWLS22, author = {Qi Zou and Yan Sun and Feng Li and Juan Wang and Jin{-}Xing Liu and Junliang Shang}, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {{TDCOSR:} {A} Multimodality Fusion Framework for Association Analysis Between Genes and ROIs of Alzheimer's Disease}, booktitle = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, pages = {159--168}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8\_15}, doi = {10.1007/978-3-031-23198-8\_15}, timestamp = {Tue, 25 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZouSLWLS22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2022, editor = {Mukul S. Bansal and Zhipeng Cai and Serghei Mangul}, title = {Bioinformatics Research and Applications - 18th International Symposium, {ISBRA} 2022, Haifa, Israel, November 14-17, 2022, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13760}, publisher = {Springer}, year = {2022}, url = {https://doi.org/10.1007/978-3-031-23198-8}, doi = {10.1007/978-3-031-23198-8}, isbn = {978-3-031-23197-1}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/2022.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/0003OZHD21, author = {Jiang Xie and Jiaming Ouyang and Chang Zhao and Hongjian He and Xin Dong}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {A Deep Learning Approach Based on Feature Reconstruction and Multi-dimensional Attention Mechanism for Drug-Drug Interaction Prediction}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {400--410}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_34}, doi = {10.1007/978-3-030-91415-8\_34}, timestamp = {Fri, 19 Nov 2021 15:46:37 +0100}, biburl = {https://dblp.org/rec/conf/isbra/0003OZHD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/0004SLSFCZCMHS21, author = {Zehua Guo and Kai Su and Liangjie Liu and Xianbin Su and Mofan Feng and Song Cao and Mingxuan Zhang and Runqiu Chi and Luming Meng and Guang He and Yi Shi}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Improving Protein-protein Interaction Prediction by Incorporating 3D Genome Information}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {511--520}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_43}, doi = {10.1007/978-3-030-91415-8\_43}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/0004SLSFCZCMHS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AliSUZPK21, author = {Sarwan Ali and Bikram Sahoo and Naimat Ullah and Alexander Zelikovskiy and Murray Patterson and Imdadullah Khan}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {A k-mer Based Approach for SARS-CoV-2 Variant Identification}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {153--164}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_14}, doi = {10.1007/978-3-030-91415-8\_14}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AliSUZPK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ArcamoneT021, author = {Francesco Arcamone and Yanlun Tu and Yang Yang}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Prediction of Protein Subcellular Localization from Microscopic Images via Few-Shot Learning}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {241--253}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_21}, doi = {10.1007/978-3-030-91415-8\_21}, timestamp = {Fri, 19 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ArcamoneT021.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BaiZZL21, author = {Tian Bai and Zhenting Zhang and Chen Zhao and Xiao Luo}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {A Novel Pseudo-Labeling Approach for Cell Detection Based on Adaptive Threshold}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {254--265}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_22}, doi = {10.1007/978-3-030-91415-8\_22}, timestamp = {Tue, 03 May 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BaiZZL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BianL0SLLCCL21, author = {Xuesheng Bian and Gang Li and Cheng Wang and Siqi Shen and Weiquan Liu and Xiuhong Lin and Zexin Chen and Mancheung Cheung and Xi{\'{o}}ngbiao Lu{\'{o}}}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {OrgaNet: {A} Deep Learning Approach for Automated Evaluation of Organoids Viability in Drug Screening}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {411--423}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_35}, doi = {10.1007/978-3-030-91415-8\_35}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/BianL0SLLCCL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/CavattoniC21, author = {Margherita Cavattoni and Matteo Comin}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Boosting Metagenomic Classification with Reads Overlap Graphs}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {521--533}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_44}, doi = {10.1007/978-3-030-91415-8\_44}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/CavattoniC21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChePDWL21, author = {Zicheng Che and Wei Peng and Wei Dai and Shoulin Wei and Wei Lan}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {A Heterogeneous Graph Convolutional Network-Based Deep Learning Model to Identify miRNA-Disease Association}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {130--141}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_12}, doi = {10.1007/978-3-030-91415-8\_12}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChePDWL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Chen0J21, author = {Ming Chen and Yi Pan and Chunyan Ji}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Predicting Drug Drug Interactions by Signed Graph Filtering-Based Convolutional Networks}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {375--387}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_32}, doi = {10.1007/978-3-030-91415-8\_32}, timestamp = {Fri, 19 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/Chen0J21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChengZXL21, author = {Jianhong Cheng and Qichang Zhao and Lei Xu and Jin Liu}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {A New Deep Learning Training Scheme: Application to Biomedical Data}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {451--459}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_38}, doi = {10.1007/978-3-030-91415-8\_38}, timestamp = {Tue, 10 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ChengZXL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChuKLWYD21, author = {He{-}Ming Chu and Xiang{-}Zhen Kong and Jin{-}Xing Liu and Juan Wang and Shasha Yuan and Ling{-}Yun Dai}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Joint {CC} and Bimax: {A} Biclustering Method for Single-Cell RNA-Seq Data Analysis}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {499--510}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_42}, doi = {10.1007/978-3-030-91415-8\_42}, timestamp = {Tue, 25 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChuKLWYD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/CuiXP21, author = {Yonghui Cui and Zhijian Xu and Shaoliang Peng}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {{IDOS:} Improved {D3DOCK} on Spark}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {436--447}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_37}, doi = {10.1007/978-3-030-91415-8\_37}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/CuiXP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DaiZHYF21, author = {Yidan Dai and Yuanyuan Zhuo and Xingxian Huang and Haibo Yu and Xiaomao Fan}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {A Novel Prediction Framework for Two-Year Stroke Recurrence Using Retinal Images}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {279--288}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_24}, doi = {10.1007/978-3-030-91415-8\_24}, timestamp = {Fri, 19 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/DaiZHYF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DaiZLFWZ21, author = {Zhongyang Dai and Haishan Zhang and Feifei Lin and Shengzhong Feng and Yanjie Wei and Jiaxiu Zhou}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {The Classification System and Biomarkers for Autism Spectrum Disorder: {A} Machine Learning Approach}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {289--299}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_25}, doi = {10.1007/978-3-030-91415-8\_25}, timestamp = {Fri, 19 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/DaiZLFWZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GaoYLS021, author = {Ying{-}Lian Gao and Meng{-}Meng Yin and Jin{-}Xing Liu and Junliang Shang and Chun{-}Hou Zheng}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {{MKL-LP:} Predicting Disease-Associated Microbes with Multiple-Similarity Kernel Learning-Based Label Propagation}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {3--10}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_1}, doi = {10.1007/978-3-030-91415-8\_1}, timestamp = {Tue, 25 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GaoYLS021.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GeLFJZX0W21, author = {Ruiquan Ge and Yizhang Luo and Guanwen Feng and Gangyong Jia and Hua Zhang and Chong Xu and Gang Xu and Pu Wang}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {SuccSPred: Succinylation Sites Prediction Using Fused Feature Representation and Ranking Method}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {191--202}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_17}, doi = {10.1007/978-3-030-91415-8\_17}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GeLFJZX0W21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GuWPZ21, author = {Yunchao Gu and Xinliang Wang and Junjun Pan and Zhong Zhou}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Diabetic Retinopathy Grading Base on Contrastive Learning and Semi-supervised Learning}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {68--79}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_7}, doi = {10.1007/978-3-030-91415-8\_7}, timestamp = {Fri, 19 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/GuWPZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GuanXLWA21, author = {Yuxia Guan and Jinrui Xu and Ning Liu and Jianxin Wang and Ying An}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {{ECG} Arrhythmia Detection Based on Hidden Attention Residual Neural Network}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {471--483}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_40}, doi = {10.1007/978-3-030-91415-8\_40}, timestamp = {Wed, 27 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GuanXLWA21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/JingLWZ21, author = {Ming Jing and Yunjing Liu and Xiaoxiao Wang and Li Zhang}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {StarLace: Nested Visualization of Temporal Brain Connectivity Data}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {348--359}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_30}, doi = {10.1007/978-3-030-91415-8\_30}, timestamp = {Wed, 19 Apr 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/JingLWZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/JuZMZLFPLW21, author = {Zhen Ju and Huiling Zhang and Jingtao Meng and Jingjing Zhang and Xuelei Li and Jianping Fan and Yi Pan and Weiguo Liu and Yanjie Wei}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {An Efficient Greedy Incremental Sequence Clustering Algorithm}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {596--607}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_50}, doi = {10.1007/978-3-030-91415-8\_50}, timestamp = {Fri, 29 Jul 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/JuZMZLFPLW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/KnyazevNGSASHBS21, author = {Sergey Knyazev and Daniel Novikov and Mark Grinshpon and Harman Singh and Ram Ayyala and Varuni Sarwal and Roya Hosseini and Pelin Icer Baykal and Pavel Skums and Ellsworth Campbell and Serghei Mangul and Alex Zelikovsky}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {A Novel Network Representation of SARS-CoV-2 Sequencing Data}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {165--175}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_15}, doi = {10.1007/978-3-030-91415-8\_15}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/KnyazevNGSASHBS21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LeeKLS021, author = {Hunmin Lee and Mingon Kang and Yingshu Li and Daehee Seo and Donghyun Kim}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Epidemic Vulnerability Index for Effective Vaccine Distribution Against Pandemic}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {22--34}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_3}, doi = {10.1007/978-3-030-91415-8\_3}, timestamp = {Fri, 19 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LeeKLS021.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiCG0021, author = {Hongjia Li and Ge Chen and Shan Gao and Jintao Li and Fa Zhang}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {PickerOptimizer: {A} Deep Learning-Based Particle Optimizer for Cryo-Electron Microscopy Particle-Picking Algorithms}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {549--560}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_46}, doi = {10.1007/978-3-030-91415-8\_46}, timestamp = {Fri, 19 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiCG0021.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiH21, author = {Jiyun Li and Peng Huang}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Task-Oriented Feature Representation for Spontaneous Speech of {AD} Patients}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {46--57}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_5}, doi = {10.1007/978-3-030-91415-8\_5}, timestamp = {Wed, 15 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiWG21, author = {Wen Li and Shulin Wang and Hu Guo}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {{LPI-FKLGCN:} Predicting LncRNA-Protein Interactions Through Fast Kernel Learning and Graph Convolutional Network}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {227--238}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_20}, doi = {10.1007/978-3-030-91415-8\_20}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiWG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiZCL21, author = {Jing Li and Shangping Zhong and Kaizhi Chen and Taibiao Li}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {SkeIn: Sketchy-Intensive Reading Comprehension Model for Multi-choice Biomedical Questions}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {561--571}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_47}, doi = {10.1007/978-3-030-91415-8\_47}, timestamp = {Fri, 19 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiZCL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LinZXNTQ21, author = {Shuting Lin and Jie Zhou and Yiqiong Xiao and Bridget Neary and Yong Teng and Peng Qiu}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Identification of Protein Markers Predictive of Drug-Specific Survival Outcome in Cancers}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {58--67}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_6}, doi = {10.1007/978-3-030-91415-8\_6}, timestamp = {Fri, 19 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LinZXNTQ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuXZ0P21, author = {Hao Liu and Xia Xiao and Xinglong Zhang and Kenli Li and Shaoliang Peng}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {{MIFS:} {A} Peer-to-Peer Medical Images Storage and Sharing System Based on Consortium Blockchain}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {336--347}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_29}, doi = {10.1007/978-3-030-91415-8\_29}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiuXZ0P21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuYD0YH21, author = {Lina Liu and Shuang Yao and Zhaoyun Ding and Maozu Guo and Donghua Yu and Keli Hu}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Drug-Target Interaction Prediction Based on Gaussian Interaction Profile and Information Entropy}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {388--399}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_33}, doi = {10.1007/978-3-030-91415-8\_33}, timestamp = {Wed, 15 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiuYD0YH21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuYHWWG21, author = {Xiangyu Liu and Chao Yu and Qikai Huang and Luhao Wang and Jianfeng Wu and Xiangdong Guan}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Combining Model-Based and Model-Free Reinforcement Learning Policies for More Efficient Sepsis Treatment}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {105--117}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_10}, doi = {10.1007/978-3-030-91415-8\_10}, timestamp = {Thu, 16 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiuYHWWG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LuLNZ21, author = {Shuai Lu and Yuguang Li and Xiaofei Nan and Shoutao Zhang}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {A Sequence-Based Antibody Paratope Prediction Model Through Combing Local-Global Information and Partner Features}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {179--190}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_16}, doi = {10.1007/978-3-030-91415-8\_16}, timestamp = {Wed, 15 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LuLNZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Luo21, author = {Sanbi Luo}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Image to Image Transfer Makes Malpositioned Teeth Orderly}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {324--335}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_28}, doi = {10.1007/978-3-030-91415-8\_28}, timestamp = {Fri, 19 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/Luo21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/PangZWZHWQ21, author = {Shanchen Pang and Kuijie Zhang and Shudong Wang and Yuanyuan Zhang and Sicheng He and Wenhao Wu and Sibo Qiao}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {{HGDD:} {A} Drug-Disease High-Order Association Information Extraction Method for Drug Repurposing via Hypergraph}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {424--435}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_36}, doi = {10.1007/978-3-030-91415-8\_36}, timestamp = {Wed, 15 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/PangZWZHWQ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SmithNBBP21, author = {Brendan Smith and Cristian Navarro{-}Martinez and Rebecca Buonopane and S. Ashley Byun and Murray Patterson}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Correlated Evolution in the Small Parsimony Framework}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {608--619}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_51}, doi = {10.1007/978-3-030-91415-8\_51}, timestamp = {Wed, 15 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/SmithNBBP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SongZLSJ21, author = {Anping Song and Hongtao Zhu and Lifang Liu and Ziheng Song and Hongyu Jin}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {An Efficient Two-Stage Fusion Network for Computer-Aided Diagnosis of Diabetic Foot}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {118--129}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_11}, doi = {10.1007/978-3-030-91415-8\_11}, timestamp = {Mon, 22 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/SongZLSJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangHLJCYF21, author = {Chen Wang and Jingzhao Hu and Ke Liu and Qiaomei Jia and Jiayue Chen and Kun Yang and Jun Feng}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {EEG-Based Emotion Recognition Fusing Spacial-Frequency Domain Features and Data-Driven Spectrogram-Like Features}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {460--470}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_39}, doi = {10.1007/978-3-030-91415-8\_39}, timestamp = {Thu, 16 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/WangHLJCYF21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangL021, author = {Yueyue Wang and Xiujuan Lei and Yi Pan}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Predicting Microbe-Disease Association via Tripartite Network and Relation Graph Convolutional Network}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {92--104}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_9}, doi = {10.1007/978-3-030-91415-8\_9}, timestamp = {Fri, 19 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/WangL021.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangMXL21, author = {Wenkang Wang and Xiangmao Meng and Ju Xiang and Min Li}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Overlapping Protein Complexes Detection Based on Multi-level Topological Similarities}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {215--226}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_19}, doi = {10.1007/978-3-030-91415-8\_19}, timestamp = {Tue, 16 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangMXL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangTLLSLYZ21, author = {Zixuan Wang and Xiaoyao Tan and Beichen Li and Yuhang Liu and Qi Shao and Zijing Li and Yihan Yang and Yongqing Zhang}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {BindTransNet: {A} Transferable Transformer-Based Architecture for Cross-Cell Type DNA-Protein Binding Sites Prediction}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {203--214}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_18}, doi = {10.1007/978-3-030-91415-8\_18}, timestamp = {Fri, 19 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/WangTLLSLYZ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangXTL21, author = {Yishu Wang and Lingyun Xu and Xuehan Tian and Zhe Lin}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Identification of Gastric Cancer Immune Microenvironment Related Genes with Poor Prognosis and Tumor Immune Infiltration}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {142--152}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_13}, doi = {10.1007/978-3-030-91415-8\_13}, timestamp = {Wed, 06 Dec 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/WangXTL21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WeiCWZ021, author = {Xiangyu Wei and Meifei Chen and Manxi Wu and Xiaowei Zhang and Bin Hu}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {EEG-Based Depression Detection with a Synthesis-Based Data Augmentation Strategy}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {484--496}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_41}, doi = {10.1007/978-3-030-91415-8\_41}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WeiCWZ021.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XinYWP21, author = {Bin Xin and Yaning Yang and Dongqing Wei and Shaoliang Peng}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {{CFCN:} {A} Multi-scale Fully Convolutional Network with Dilated Convolution for Nuclei Classification and Localization}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {314--323}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_27}, doi = {10.1007/978-3-030-91415-8\_27}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/XinYWP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XuGWWFWW21, author = {Kele Xu and Zijian Gao and Jilong Wang and Yang Wen and Ming Feng and Changjian Wang and Yin Wang}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Batch Weighted Nuclear-Norm Minimization for Medical Image Sequence Segmentation}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {360--371}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_31}, doi = {10.1007/978-3-030-91415-8\_31}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/XuGWWFWW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XuMJQ21, author = {Congmin Xu and Quoc D. Mac and Qiong Jia and Peng Qiu}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Immune-Microbiota Crosstalk Underlying Inflammatory Bowel Disease}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {11--21}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_2}, doi = {10.1007/978-3-030-91415-8\_2}, timestamp = {Fri, 19 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/XuMJQ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XuQ21, author = {Shuying Xu and Hongyan Quan}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {LiteTrans: Reconstruct Transformer with Convolution for Medical Image Segmentation}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {300--313}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_26}, doi = {10.1007/978-3-030-91415-8\_26}, timestamp = {Fri, 19 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/XuQ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangCZSP21, author = {Jitao Zhang and Shihong Chen and Haoling Zhang and Yue Shen and Zhi Ping}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {{DNA} Image Storage Using a Scheme Based on Fuzzy Matching on Natural Genome}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {572--583}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_48}, doi = {10.1007/978-3-030-91415-8\_48}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhangCZSP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhaoFLJ21, author = {Qing Zhao and Renyan Feng and Jianqiang Li and Yanhe Jia}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Exploiting Multi-granular Features for the Enhanced Predictive Modeling of {COPD} Based on Chinese EMRs}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {35--45}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_4}, doi = {10.1007/978-3-030-91415-8\_4}, timestamp = {Fri, 24 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ZhaoFLJ21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhaoW21, author = {Chang Zhao and Shunfang Wang}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Parameter Transfer Learning Measured by Image Similarity to Detect {CT} of {COVID-19}}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {266--278}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_23}, doi = {10.1007/978-3-030-91415-8\_23}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ZhaoW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhuDYW21, author = {Lingzhi Zhu and Guihua Duan and Cheng Yan and Jianxin Wang}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Prediction of Virus-Receptor Interactions Based on Similarity and Matrix Completion}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {584--595}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_49}, doi = {10.1007/978-3-030-91415-8\_49}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhuDYW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhuLLWP21, author = {Xiaoshu Zhu and Yongchang Lin and Jian Li and Jianxin Wang and Xiaoqing Peng}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {ScDA: {A} Denoising AutoEncoder Based Dimensionality Reduction for Single-cell RNA-seq Data}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {534--545}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_45}, doi = {10.1007/978-3-030-91415-8\_45}, timestamp = {Wed, 27 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhuLLWP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhuZRZLW21, author = {Jinhao Zhu and Yinjia Zhang and Weixiong Rao and Qinpei Zhao and Jiangfeng Li and Congrong Wang}, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Reinforcement Learning for Diabetes Blood Glucose Control with Meal Information}, booktitle = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, pages = {80--91}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8\_8}, doi = {10.1007/978-3-030-91415-8\_8}, timestamp = {Fri, 26 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ZhuZRZLW21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2021, editor = {Yanjie Wei and Min Li and Pavel Skums and Zhipeng Cai}, title = {Bioinformatics Research and Applications - 17th International Symposium, {ISBRA} 2021, Shenzhen, China, November 26-28, 2021, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {13064}, publisher = {Springer}, year = {2021}, url = {https://doi.org/10.1007/978-3-030-91415-8}, doi = {10.1007/978-3-030-91415-8}, isbn = {978-3-030-91414-1}, timestamp = {Fri, 19 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/2021.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AlqahtaniM20, author = {Fahad Alqahtani and Ion I. Mandoiu}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Mitochondrial Haplogroup Assignment for High-Throughput Sequencing Data from Single Individual and Mixed {DNA} Samples}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {1--12}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_1}, doi = {10.1007/978-3-030-57821-3\_1}, timestamp = {Wed, 26 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AlqahtaniM20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AndrianovNKKBT20, author = {Alexander M. Andrianov and Grigory I. Nikolaev and Yuri V. Kornoushenko and Anna D. Karpenko and Ivan P. Bosko and Alexander V. Tuzikov}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {In Silico-Guided Discovery of Potential {HIV-1} Entry Inhibitors Mimicking bNAb {N6:} Virtual Screening, Docking, Molecular Dynamics, and Post-Molecular Modeling Analysis}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {243--249}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_21}, doi = {10.1007/978-3-030-57821-3\_21}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AndrianovNKKBT20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AndrianovNKU20, author = {Alexander M. Andrianov and Grigory I. Nikolaev and Yuri V. Kornoushenko and Sergei A. Usanov}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {In Silico Design and Evaluation of Novel Triazole-Based Compounds as Promising Drug Candidates Against Breast Cancer}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {312--318}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_29}, doi = {10.1007/978-3-030-57821-3\_29}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AndrianovNKU20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AnsarifarM0E20, author = {Javad Ansarifar and Alexey Markin and Pawel G{\'{o}}recki and Oliver Eulenstein}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Integer Linear Programming Formulation for the Unified Duplication-Loss-Coalescence Model}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {229--242}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_20}, doi = {10.1007/978-3-030-57821-3\_20}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AnsarifarM0E20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BrandesLL20, author = {Nadav Brandes and Nathan Linial and Michal Linial}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Functional Evolutionary Modeling Exposes Overlooked Protein-Coding Genes Involved in Cancer}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {119--126}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_11}, doi = {10.1007/978-3-030-57821-3\_11}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BrandesLL20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BykovSGG20, author = {Nikolai S. Bykov and Olga M. Sigalova and Mikhail S. Gelfand and Aleksandra A. Galitsyna}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {HiChew: a Tool for {TAD} Clustering in Embryogenesis}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {381--388}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_37}, doi = {10.1007/978-3-030-57821-3\_37}, timestamp = {Wed, 26 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BykovSGG20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/CheloshkinaBP20, author = {Kseniia Cheloshkina and Islam Bzhikhatlov and Maria Poptsova}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Cancer Breakpoint Hotspots Versus Individual Breakpoints Prediction by Machine Learning Models}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {217--228}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_19}, doi = {10.1007/978-3-030-57821-3\_19}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/CheloshkinaBP20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DesaiPSW20, author = {Heta P. Desai and Anuja P. Parameshwaran and Rajshekhar Sunderraman and Michael Weeks}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Deep Ensemble Models for 16S Ribosomal Gene Classification}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {282--290}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_25}, doi = {10.1007/978-3-030-57821-3\_25}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DesaiPSW20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DharZMB20, author = {Saurav Dhar and Chengchen Zhang and Ion I. Mandoiu and Mukul S. Bansal}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {TNet: Phylogeny-Based Inference of Disease Transmission Networks Using Within-Host Strain Diversity}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {203--216}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_18}, doi = {10.1007/978-3-030-57821-3\_18}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DharZMB20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Fernandez-BacaL20, author = {David Fern{\'{a}}ndez{-}Baca and Lei Liu}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Testing the Agreement of Trees with Internal Labels}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {127--139}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_12}, doi = {10.1007/978-3-030-57821-3\_12}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Fernandez-BacaL20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GaoHZCLXZ20, author = {Shan Gao and Renmin Han and Xiangrui Zeng and Xuefeng Cui and Zhiyong Liu and Min Xu and Fa Zhang}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Dilated-DenseNet for Macromolecule Classification in Cryo-electron Tomography}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {82--94}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_8}, doi = {10.1007/978-3-030-57821-3\_8}, timestamp = {Wed, 20 Jan 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/GaoHZCLXZ20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GaoLW20, author = {Hao Gao and Min Li and Fang{-}Xiang Wu}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {{SPOC:} Identification of Drug Targets in Biological Networks via Set Preference Output Control}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {26--37}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_3}, doi = {10.1007/978-3-030-57821-3\_3}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GaoLW20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GuZWSCZ20, author = {Wenyan Gu and Aizhong Zhou and Lusheng Wang and Shiwei Sun and Xuefeng Cui and Daming Zhu}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {{SVLR:} Genome Structure Variant Detection Using Long Read Sequencing Data}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {140--153}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_13}, doi = {10.1007/978-3-030-57821-3\_13}, timestamp = {Sat, 09 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GuZWSCZ20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GuoYMW20, author = {Hongyu Guo and Wutao Yin and Sakib Mostafa and Fang{-}Xiang Wu}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Diagnosis of {ASD} from rs-fMRI Images Based on Brain Dynamic Networks}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {166--177}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_15}, doi = {10.1007/978-3-030-57821-3\_15}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GuoYMW20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HadarovichKT20, author = {Anna Hadarovich and Alexander Kalinouski and Alexander V. Tuzikov}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Deep Learning Approach with Rotate-Shift Invariant Input to Predict Protein Homodimer Structure}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {296--303}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_27}, doi = {10.1007/978-3-030-57821-3\_27}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HadarovichKT20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HellmuthMN20, author = {Marc Hellmuth and Daniel Merkle and Nikolai N{\o}jgaard}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Atom Tracking Using Cayley Graphs}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {406--415}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_41}, doi = {10.1007/978-3-030-57821-3\_41}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/HellmuthMN20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HuangWZY20, author = {Qiuyue Huang and Jun Wang and Xiangliang Zhang and Guoxian Yu}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Isoform-Disease Association Prediction by Data Fusion}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {44--55}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_5}, doi = {10.1007/978-3-030-57821-3\_5}, timestamp = {Wed, 24 Feb 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/HuangWZY20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/KimB20, author = {Wooyoung Kim and Zachary Arthur Brader}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {NemoLib: Network Motif Libraries for Network Motif Detection and Analysis}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {327--334}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_31}, doi = {10.1007/978-3-030-57821-3\_31}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/KimB20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/KorotkovKK20, author = {Eugene V. Korotkov and Anastasya M. Kamionskaya and Maria A. Korotkova}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Search for Tandem Repeats in the First Chromosome from the Rice Genome}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {291--295}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_26}, doi = {10.1007/978-3-030-57821-3\_26}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/KorotkovKK20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiDYWW20, author = {Na Li and Guihua Duan and Cheng Yan and Fang{-}Xiang Wu and Jianxin Wang}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {MiRNA-Disease Associations Prediction Based on Negative Sample Selection and Multi-layer Perceptron}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {178--188}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_16}, doi = {10.1007/978-3-030-57821-3\_16}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiDYWW20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuSPHW20, author = {Chun{-}Cheng Liu and Tao{-}Chuan Shih and Tun{-}Wen Pai and Chin{-}Hwa Hu and Lee{-}Jyi Wang}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Enhanced Functional Pathway Annotations for Differentially Expressed Gene Clusters}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {352--363}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_34}, doi = {10.1007/978-3-030-57821-3\_34}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiuSPHW20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LvLY20, author = {Xingfeng Lv and Jinbao Li and Qin Yan}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Automated Detection of Sleep Apnea from Abdominal Respiratory Signal Using Hilbert-Huang Transform}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {364--371}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_35}, doi = {10.1007/978-3-030-57821-3\_35}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LvLY20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MoussaM20, author = {Marmar Moussa and Ion I. Mandoiu}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {{SC1:} {A} Tool for Interactive Web-Based Single Cell RNA-Seq Data Analysis}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {389--397}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_39}, doi = {10.1007/978-3-030-57821-3\_39}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MoussaM20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MyasnikovaSS20, author = {Ekaterina M. Myasnikova and Victoria Yu. Samuta and Alexander V. Spirov}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Quantitative Analysis of the Dynamics of Maternal Gradients in the Early Drosophila Embryo}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {398--405}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_40}, doi = {10.1007/978-3-030-57821-3\_40}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MyasnikovaSS20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/NikolaevSATA20, author = {Grigory I. Nikolaev and Nikita A. Shuldov and Arseny I. Anischenko and Alexander V. Tuzikov and Alexander M. Andrianov}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Development of a Neural Network-Based Approach for Prediction of Potential {HIV-1} Entry Inhibitors Using Deep Learning and Molecular Modeling Methods}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {304--311}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_28}, doi = {10.1007/978-3-030-57821-3\_28}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/NikolaevSATA20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ParviniBF20, author = {Ghazaleh Parvini and Katherine Braught and David Fern{\'{a}}ndez{-}Baca}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Checking Phylogenetic Decisiveness in Theory and in Practice}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {189--202}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_17}, doi = {10.1007/978-3-030-57821-3\_17}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ParviniBF20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/PetukhovaGSM20, author = {D. A. Petukhova and E. E. Gurinova and A. L. Sukhomyasova and N. R. Maksimova}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Identification of a Novel Compound Heterozygous Variant in {NBAS} Causing Bone Fragility by the Type of Osteogenesis Imperfecta}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {38--43}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_4}, doi = {10.1007/978-3-030-57821-3\_4}, timestamp = {Wed, 26 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/PetukhovaGSM20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/RondelHSKMSMPZ20, author = {Filipp Rondel and Akram Sadat Hosseini and Bikram Sahoo and Sergey Knyazev and Igor Mandric and Frank Stewart and Ion I. Mandoiu and Bogdan Pasaniuc and Alex Zelikovsky}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Estimating Enzyme Participation in Metabolic Pathways for Microbial Communities from RNA-seq Data}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {335--343}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_32}, doi = {10.1007/978-3-030-57821-3\_32}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/RondelHSKMSMPZ20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SolovevOTDAPSP20, author = {Yaroslav V. Solovev and Daria S. Ostroverkhova and Gaik Tamazian and Anton V. Domnin and Anastasya A. Anashkina and Irina Yu. Petrushanko and Eugene O. Stepanov and Yuri B. Porozov}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Na/K-ATPase Glutathionylation: in silico Modeling of Reaction Mechanisms}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {372--380}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_36}, doi = {10.1007/978-3-030-57821-3\_36}, timestamp = {Wed, 26 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SolovevOTDAPSP20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/StoratoC20, author = {Davide Storato and Matteo Comin}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Improving Metagenomic Classification Using Discriminative k-mers from Sequencing Data}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {68--81}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_7}, doi = {10.1007/978-3-030-57821-3\_7}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/StoratoC20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/TinkovPGP20, author = {Oleg Tinkov and Pavel G. Polishchuk and Veniamin Yu. Grigor'ev and Yuri Porozov}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {The Cross-Interpretation of {QSAR} Toxicological Models}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {262--273}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_23}, doi = {10.1007/978-3-030-57821-3\_23}, timestamp = {Wed, 30 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/TinkovPGP20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangJCG20, author = {Sai Wang and Caiyan Jia and Zhineng Chen and Xieping Gao}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Signet Ring Cell Detection with Classification Reinforcement Detection Network}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {13--25}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_2}, doi = {10.1007/978-3-030-57821-3\_2}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangJCG20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangK20, author = {Yangxiao Wang and Wooyoung Kim}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Identification of Essential Genes with NemoProfile and Various Machine Learning Models}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {319--326}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_30}, doi = {10.1007/978-3-030-57821-3\_30}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangK20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangZZLL20, author = {Nian Wang and Min Zeng and Jiashuai Zhang and Yiming Li and Min Li}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Ess-NEXG: Predict Essential Proteins by Constructing a Weighted Protein Interaction Network Based on Node Embedding and XGBoost}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {95--104}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_9}, doi = {10.1007/978-3-030-57821-3\_9}, timestamp = {Mon, 09 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/WangZZLL20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WuYLW20, author = {Gaoyan Wu and Mengyun Yang and Yaohang Li and Jianxin Wang}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {De novo Prediction of Drug-Target Interaction via Laplacian Regularized Schatten-p Norm Minimization}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {154--165}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_14}, doi = {10.1007/978-3-030-57821-3\_14}, timestamp = {Fri, 21 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WuYLW20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XiePLTZ20, author = {Yuan Xie and Yulong Pei and Yun Lu and Haixu Tang and Yuan Zhou}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Learning Structural Genetic Information via Graph Neural Embedding}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {250--261}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_22}, doi = {10.1007/978-3-030-57821-3\_22}, timestamp = {Wed, 16 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/XiePLTZ20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Yang020, author = {Wen Yang and Lusheng Wang}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {mapAlign: An Efficient Approach for Mapping and Aligning Long Reads to Reference Genomes}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {105--118}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_10}, doi = {10.1007/978-3-030-57821-3\_10}, timestamp = {Wed, 26 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Yang020.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YukaY20, author = {Selcen Ari Yuka and Alper Yilmaz}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {A New Network-Based Tool to Analyse Competing Endogenous RNAs}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {274--281}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_24}, doi = {10.1007/978-3-030-57821-3\_24}, timestamp = {Wed, 26 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YukaY20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangYRGW20, author = {Huiling Zhang and Guoxian Yu and Wei Ren and Maozu Guo and Jun Wang}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {EpIntMC: Detecting Epistatic Interactions Using Multiple Clusterings}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {56--67}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_6}, doi = {10.1007/978-3-030-57821-3\_6}, timestamp = {Wed, 20 Jan 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ZhangYRGW20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhuYD20, author = {Lingzhi Zhu and Cheng Yan and Guihua Duan}, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Identification of Virus-Receptor Interactions Based on Network Enhancement and Similarity}, booktitle = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, pages = {344--351}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3\_33}, doi = {10.1007/978-3-030-57821-3\_33}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhuYD20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2020, editor = {Zhipeng Cai and Ion I. Mandoiu and Giri Narasimhan and Pavel Skums and Xuan Guo}, title = {Bioinformatics Research and Applications - 16th International Symposium, {ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {12304}, publisher = {Springer}, year = {2020}, url = {https://doi.org/10.1007/978-3-030-57821-3}, doi = {10.1007/978-3-030-57821-3}, isbn = {978-3-030-57820-6}, timestamp = {Fri, 21 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2020.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AcharyaCP19, author = {Sudipta Acharya and Laizhong Cui and Yi Pan}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Automated Hub-Protein Detection via a New Fused Similarity Measure-Based Multi-objective Clustering Framework}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {138--145}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_12}, doi = {10.1007/978-3-030-20242-2\_12}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AcharyaCP19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AndersenMR19, author = {Jakob L. Andersen and Daniel Merkle and Peter S. Rasmussen}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Graph Transformations, Semigroups, and Isotopic Labeling}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {196--207}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_17}, doi = {10.1007/978-3-030-20242-2\_17}, timestamp = {Mon, 27 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AndersenMR19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BritoJFODD19, author = {Klairton Lima Brito and G{\'{e}}raldine Jean and Guillaume Fertin and Andre Rodrigues Oliveira and Ulisses Dias and Zanoni Dias}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Sorting by Reversals, Transpositions, and Indels on Both Gene Order and Intergenic Sizes}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {28--39}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_3}, doi = {10.1007/978-3-030-20242-2\_3}, timestamp = {Fri, 31 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BritoJFODD19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BrunerS19, author = {Ariel Bruner and Roded Sharan}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {A Robustness Analysis of Dynamic Boolean Models of Cellular Circuits}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {183--195}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_16}, doi = {10.1007/978-3-030-20242-2\_16}, timestamp = {Mon, 27 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BrunerS19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChenULW19, author = {Zhi{-}Zhong Chen and Shohei Ueta and Jingyu Li and Lusheng Wang}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Computing a Consensus Phylogeny via Leaf Removal}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {3--15}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_1}, doi = {10.1007/978-3-030-20242-2\_1}, timestamp = {Mon, 10 Feb 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ChenULW19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DaiCPZL19, author = {Wei Dai and Qi Chang and Wei Peng and Jiancheng Zhong and Yongjiang Li}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Identifying Human Essential Genes by Network Embedding Protein-Protein Interaction Network}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {127--137}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_11}, doi = {10.1007/978-3-030-20242-2\_11}, timestamp = {Tue, 18 May 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DaiCPZL19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DaiLPSZW19, author = {Wei Dai and Xia Li and Wei Peng and Jurong Song and Jiancheng Zhong and Jianxin Wang}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Improving Identification of Essential Proteins by a Novel Ensemble Method}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {146--155}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_13}, doi = {10.1007/978-3-030-20242-2\_13}, timestamp = {Thu, 15 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DaiLPSZW19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DuON19, author = {Peng Du and Huw A. Ogilvie and Luay Nakhleh}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Unifying Gene Duplication, Loss, and Coalescence on Phylogenetic Networks}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {40--51}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_4}, doi = {10.1007/978-3-030-20242-2\_4}, timestamp = {Mon, 27 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DuON19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/FiosinaFB19, author = {Jelena Fiosina and Maksims Fiosins and Stefan Bonn}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Deep Learning and Random Forest-Based Augmentation of sRNA Expression Profiles}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {159--170}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_14}, doi = {10.1007/978-3-030-20242-2\_14}, timestamp = {Mon, 27 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/FiosinaFB19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GouveiaLM19, author = {Filipe Gouveia and In{\^{e}}s Lynce and Pedro T. Monteiro}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Model Revision of Boolean Regulatory Networks at Stable State}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {100--112}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_9}, doi = {10.1007/978-3-030-20242-2\_9}, timestamp = {Thu, 04 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GouveiaLM19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HaoMOK19, author = {Jie Hao and Mohammad Masum and Jung Hun Oh and Mingon Kang}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Gene- and Pathway-Based Deep Neural Network for Multi-omics Data Integration to Predict Cancer Survival Outcomes}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {113--124}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_10}, doi = {10.1007/978-3-030-20242-2\_10}, timestamp = {Fri, 31 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HaoMOK19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HeL19, author = {Zaobo He and Jianqiang Li}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Modeling SNP-Trait Associations and Realizing Privacy-Utility Tradeoff in Genomic Data Publishing}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {65--72}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_6}, doi = {10.1007/978-3-030-20242-2\_6}, timestamp = {Fri, 03 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/HeL19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiB19, author = {Lei Li and Mukul S. Bansal}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Simultaneous Multi-Domain-Multi-Gene Reconciliation Under the Domain-Gene-Species Reconciliation Model}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {73--86}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_7}, doi = {10.1007/978-3-030-20242-2\_7}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiB19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuJLZZ19, author = {Lixin Liu and Haitao Jiang and Peiqiang Liu and Binhai Zhu and Daming Zhu}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Maximum Stacking Base Pairs: Hardness and Approximation by Nonlinear LP-Rounding}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {244--256}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_21}, doi = {10.1007/978-3-030-20242-2\_21}, timestamp = {Mon, 27 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiuJLZZ19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MoonE19, author = {Jucheol Moon and Oliver Eulenstein}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {The Cluster Affinity Distance for Phylogenies}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {52--64}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_5}, doi = {10.1007/978-3-030-20242-2\_5}, timestamp = {Mon, 27 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MoonE19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/PetrucciNPC19, author = {Enrico Petrucci and Laurent No{\'{e}} and Cinzia Pizzi and Matteo Comin}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Iterative Spaced Seed Hashing: Closing the Gap Between Spaced Seed Hashing and k-mer Hashing}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {208--219}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_18}, doi = {10.1007/978-3-030-20242-2\_18}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/PetrucciNPC19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Snir19, author = {Sagi Snir}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Greedy Partition Distance Under Stochastic Models - Analytic Results}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {257--269}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_22}, doi = {10.1007/978-3-030-20242-2\_22}, timestamp = {Mon, 27 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Snir19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangZLLWZ19, author = {Zihao Wang and Jingrong Zhang and Xintong Liu and Zhiyong Liu and Xiaohua Wan and Fa Zhang}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {{DM-SIRT:} {A} Distributed Method for Multi-tilt Reconstruction in Electron Tomography}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {220--231}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_19}, doi = {10.1007/978-3-030-20242-2\_19}, timestamp = {Thu, 19 Nov 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/WangZLLWZ19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WimberleyH19, author = {Charles E. Wimberley and Steffen Heber}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {PeakPass: Automating ChIP-Seq Blacklist Creation}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {232--243}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_20}, doi = {10.1007/978-3-030-20242-2\_20}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WimberleyH19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YanDZW0W19, author = {Cheng Yan and Guihua Duan and Yayan Zhang and Fang{-}Xiang Wu and Yi Pan and Jianxin Wang}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {{IDNDDI:} An Integrated Drug Similarity Network Method for Predicting Drug-Drug Interactions}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {89--99}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_8}, doi = {10.1007/978-3-030-20242-2\_8}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YanDZW0W19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YangLZMLZ19, author = {Xiangyu Yang and Zhenghao Li and Jingtian Zhao and Tao Ma and Pengchao Li and Le Zhang}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {The Review of Bioinformatics Tool for 3D Plant Genomics Research}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {16--27}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_2}, doi = {10.1007/978-3-030-20242-2\_2}, timestamp = {Wed, 01 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/YangLZMLZ19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhaoSZSSSW19, author = {Fengpan Zhao and Pavel Skums and Alex Zelikovsky and Eric L. Sevigny and Monica Haavisto Swahn and Sheryl M. Strasser and Yubao Wu}, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Detecting Illicit Drug Ads in Google+ Using Machine Learning}, booktitle = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, pages = {171--179}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2\_15}, doi = {10.1007/978-3-030-20242-2\_15}, timestamp = {Mon, 15 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhaoSZSSSW19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2019, editor = {Zhipeng Cai and Pavel Skums and Min Li}, title = {Bioinformatics Research and Applications - 15th International Symposium, {ISBRA} 2019, Barcelona, Spain, June 3-6, 2019, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {11490}, publisher = {Springer}, year = {2019}, url = {https://doi.org/10.1007/978-3-030-20242-2}, doi = {10.1007/978-3-030-20242-2}, isbn = {978-3-030-20241-5}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2019.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AninditaMPHT18, author = {Satya Anindita and Atika Marnolia and Hersal Hermana Putra and Muhammad Chandra Haikal and Usman Sumo Friend Tambunan}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Novel Inhibitors of {T315I} Mutant {BCR-ABL1} Tyrosine Kinase for Chronic Myeloid Leukemia Disease Through Fragment-Based Drug Design}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {185--190}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_17}, doi = {10.1007/978-3-319-94968-0\_17}, timestamp = {Tue, 20 Aug 2024 07:54:43 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AninditaMPHT18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChurkinB18, author = {Alexander Churkin and Danny Barash}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {A Biologically Meaningful Extension of the Efficient Method for Deleterious Mutations Prediction in RNAs: Insertions and Deletions in Addition to Substitution Mutations}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {174--178}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_15}, doi = {10.1007/978-3-319-94968-0\_15}, timestamp = {Mon, 16 Jul 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChurkinB18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DengCLZLWL18, author = {Canshang Deng and Qingfeng Chen and Zhixian Liu and Ruiqing Zheng and Jin Liu and Jianxin Wang and Wei Lan}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {{KSIBW:} Predicting Kinase-Substrate Interactions Based on Bi-random Walk}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {151--162}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_13}, doi = {10.1007/978-3-319-94968-0\_13}, timestamp = {Fri, 21 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DengCLZLWL18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DengDL18, author = {Lei Deng and Zuojin Dong and Hui Liu}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {XPredRBR: Accurate and Fast Prediction of RNA-Binding Residues in Proteins Using eXtreme Gradient Boosting}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {163--173}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_14}, doi = {10.1007/978-3-319-94968-0\_14}, timestamp = {Thu, 16 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DengDL18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/FuXY18, author = {Xiaofeng Fu and Yiqun Xiao and Yang Yang}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Prediction of Type {III} Secreted Effectors Based on Word Embeddings for Protein Sequences}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {287--298}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_28}, doi = {10.1007/978-3-319-94968-0\_28}, timestamp = {Tue, 17 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/FuXY18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GogolewskiSCG18, author = {Krzysztof Gogolewski and Maciej Sykulski and Neo Christopher Chung and Anna Gambin}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Truncated Robust Principal Component Analysis and Noise Reduction for Single Cell RNA-seq Data}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {335--346}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_32}, doi = {10.1007/978-3-319-94968-0\_32}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GogolewskiSCG18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HaslamSWKSA018, author = {Devin Haslam and Salim Sazzed and Willy Wriggers and Julio Kovcas and Junha Song and Manfred Auer and Jing He}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {A Pattern Recognition Tool for Medium-Resolution Cryo-EM Density Maps and Low-Resolution Cryo-ET Density Maps}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {233--238}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_22}, doi = {10.1007/978-3-319-94968-0\_22}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HaslamSWKSA018.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HuangYLYCWH18, author = {Ke Huang and Shubo Yang and Zhaojian Luo and Ke Yang and Menghan Chen and Guopeng Wei and Jian Huang}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {A Fast Genome Sequence Aligner Based on Minimal Perfect Hash Algorithm Realized with {FPGA} Based Heterogeneous Computing Platform}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {227--232}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_21}, doi = {10.1007/978-3-319-94968-0\_21}, timestamp = {Wed, 05 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/HuangYLYCWH18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HuangZ18, author = {Suyun Huang and Xing{-}Ming Zhao}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Prediction of Drug Response with a Topology Based Dual-Layer Network Model}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {3--12}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_1}, doi = {10.1007/978-3-319-94968-0\_1}, timestamp = {Mon, 16 Jul 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HuangZ18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/IslamRYXZR18, author = {Tunazzina Islam and Desh Ranjan and Eleanor Young and Ming Xiao and Mohammad Zubair and Harold Riethman}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {{REXTAL:} Regional Extension of Assemblies Using Linked-Reads}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {63--78}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_6}, doi = {10.1007/978-3-319-94968-0\_6}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/IslamRYXZR18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/JingZCZ18, author = {Fang Jing and Shao{-}Wu Zhang and Zhen Cao and Shihua Zhang}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Combining Sequence and Epigenomic Data to Predict Transcription Factor Binding Sites Using Deep Learning}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {241--252}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_23}, doi = {10.1007/978-3-319-94968-0\_23}, timestamp = {Tue, 10 Nov 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/JingZCZ18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LetuSJZ18, author = {Letu Qingge and Killian Smith and Sean Jungst and Binhai Zhu}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {On Approaching the One-Sided Exemplar Adjacency Number Problem}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {275--286}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_27}, doi = {10.1007/978-3-319-94968-0\_27}, timestamp = {Tue, 02 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LetuSJZ18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiLSLZ18, author = {Huiyu Li and Shengjun Li and Junliang Shang and Jin{-}Xing Liu and Chun{-}Hou Zheng}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {An Improved Particle Swarm Optimization with Dynamic Scale-Free Network for Detecting Multi-omics Features}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {26--37}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_3}, doi = {10.1007/978-3-319-94968-0\_3}, timestamp = {Tue, 25 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiLSLZ18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuHZW18, author = {Liyuan Liu and Meng Han and Yiyun Zhou and Yan Wang}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {{LSTM} Recurrent Neural Networks for Influenza Trends Prediction}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {259--264}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_25}, doi = {10.1007/978-3-319-94968-0\_25}, timestamp = {Sat, 04 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiuHZW18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuS18, author = {Shuhui Liu and Xuequn Shang}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Hierarchical Similarity Network Fusion for Discovering Cancer Subtypes}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {125--136}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_11}, doi = {10.1007/978-3-319-94968-0\_11}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiuS18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuXYZ18, author = {Guangdi Liu and Yuan Xia and Chuanwei Yang and Le Zhang}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {The Review of the Major Entropy Methods and Applications in Biomedical Signal Research}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {87--100}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_8}, doi = {10.1007/978-3-319-94968-0\_8}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiuXYZ18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LuoTCXW18, author = {Ping Luo and Li{-}Ping Tian and Bolin Chen and Qianghua Xiao and Fang{-}Xiang Wu}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Predicting Gene-Disease Associations with Manifold Learning}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {265--271}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_26}, doi = {10.1007/978-3-319-94968-0\_26}, timestamp = {Thu, 01 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LuoTCXW18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MaX18, author = {Terry Ma and Xin Xing}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {A Scalable Reference-Free Metagenomic Binning Pipeline}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {79--83}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_7}, doi = {10.1007/978-3-319-94968-0\_7}, timestamp = {Mon, 16 Jul 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MaX18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MoonE18, author = {Jucheol Moon and Oliver Eulenstein}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Cluster Matching Distance for Rooted Phylogenetic Trees}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {321--332}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_31}, doi = {10.1007/978-3-319-94968-0\_31}, timestamp = {Mon, 16 Jul 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MoonE18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MoussaM18, author = {Marmar Moussa and Ion I. Mandoiu}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Locality Sensitive Imputation for Single-Cell RNA-Seq Data}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {347--360}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_33}, doi = {10.1007/978-3-319-94968-0\_33}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MoussaM18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/NgOS18, author = {Albert Ng and Adedayo Odesile and Dong Si}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {{GPU} Accelerated Ray Tracing for the Beta-Barrel Detection from Three-Dimensional Cryo-EM Maps}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {217--226}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_20}, doi = {10.1007/978-3-319-94968-0\_20}, timestamp = {Mon, 16 Jul 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/NgOS18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/RizkiNSET18, author = {Ilmi Fadhilah Rizki and Mochammad Arfin Fardiansyah Nasution and Syafrida Siregar and Mega Maulina Ekawati and Usman Sumo Friend Tambunan}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Screening of Sonic Hedgehog (Shh) Inhibitors in the Hedgehog Signaling Pathway from Traditional Chinese Medicine {(TCM)} Database Through Structure-Based Pharmacophore Design}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {179--184}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_16}, doi = {10.1007/978-3-319-94968-0\_16}, timestamp = {Sat, 19 Oct 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/RizkiNSET18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SchultzX18, author = {Daniel W. Schultz and Bojian Xu}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {On k-Mismatch Shortest Unique Substring Queries Using {GPU}}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {193--204}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_18}, doi = {10.1007/978-3-319-94968-0\_18}, timestamp = {Mon, 16 Jul 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SchultzX18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ShiGW18, author = {Kai Shi and Lin Gao and Bingbo Wang}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Inferring Dysregulated Pathways of Driving Cancer Subtypes Through Multi-omics Integration}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {101--112}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_9}, doi = {10.1007/978-3-319-94968-0\_9}, timestamp = {Mon, 08 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ShiGW18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Snir18, author = {Sagi Snir}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Bounds on Identification of Genome Evolution Pacemakers}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {51--62}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_5}, doi = {10.1007/978-3-319-94968-0\_5}, timestamp = {Mon, 16 Jul 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Snir18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SnirY18, author = {Sagi Snir and Ben Yohay}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Extending the Evolvability Model to the Prokaryotic World: Simulations and Results on Real Data}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {299--313}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_29}, doi = {10.1007/978-3-319-94968-0\_29}, timestamp = {Mon, 16 Jul 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SnirY18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WuSZRL18, author = {Yubao Wu and Pavel Skums and Alex Zelikovsky and David Stiven Campo Rendon and Xueting Liao}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Predicting Opioid Epidemic by Using Twitter Data}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {314--318}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_30}, doi = {10.1007/978-3-319-94968-0\_30}, timestamp = {Mon, 15 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WuSZRL18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YanLCP18, author = {Ming Yan and Ling Liu and Sihan Chen and Yi Pan}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {A Deep Learning Method for Prediction of Benign Epilepsy with Centrotemporal Spikes}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {253--258}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_24}, doi = {10.1007/978-3-319-94968-0\_24}, timestamp = {Tue, 18 Jun 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YanLCP18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangWCLZ18, author = {Jingrong Zhang and Zihao Wang and Yu Chen and Zhiyong Liu and Fa Zhang}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Memory-Efficient and Stabilizing Management System and Parallel Methods for {RELION} Using {CUDA} and {MPI}}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {205--216}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_19}, doi = {10.1007/978-3-319-94968-0\_19}, timestamp = {Thu, 19 Nov 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ZhangWCLZ18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangWLSLW018, author = {Zhen Zhang and Jianxin Wang and Junwei Luo and Juan Shang and Min Li and Fang{-}Xiang Wu and Yi Pan}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Sprites2: Detection of Deletions Based on an Accurate Alignment Strategy}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {139--150}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_12}, doi = {10.1007/978-3-319-94968-0\_12}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhangWLSLW018.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Zhao18, author = {Yue Zhao}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {An Extension of Deep Pathway Analysis: {A} Pathway Route Analysis Framework Incorporating Multi-dimensional Cancer Genomics Data}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {113--124}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_10}, doi = {10.1007/978-3-319-94968-0\_10}, timestamp = {Mon, 16 Jul 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Zhao18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhaoZCLWL18, author = {Siyu Zhao and Ruiqing Zheng and Xiang Chen and Yaohang Li and Fang{-}Xiang Wu and Min Li}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {PBMarsNet: {A} Multivariate Adaptive Regression Splines Based Method to Reconstruct Gene Regulatory Networks}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {38--48}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_4}, doi = {10.1007/978-3-319-94968-0\_4}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhaoZCLWL18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhuLDX18, author = {Qiao Zhu and Jiawei Luo and Pingjian Ding and Qiu Xiao}, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {{GRTR:} Drug-Disease Association Prediction Based on Graph Regularized Transductive Regression on Heterogeneous Network}, booktitle = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, pages = {13--25}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0\_2}, doi = {10.1007/978-3-319-94968-0\_2}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhuLDX18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2018, editor = {Fa Zhang and Zhipeng Cai and Pavel Skums and Shihua Zhang}, title = {Bioinformatics Research and Applications - 14th International Symposium, {ISBRA} 2018, Beijing, China, June 8-11, 2018, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10847}, publisher = {Springer}, year = {2018}, url = {https://doi.org/10.1007/978-3-319-94968-0}, doi = {10.1007/978-3-319-94968-0}, isbn = {978-3-319-94967-3}, timestamp = {Tue, 20 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2018.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AndersenK17, author = {Andrew Andersen and Wooyoung Kim}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {NemoLib: {A} Java Library for Efficient Network Motif Detection}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {403--407}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_42}, doi = {10.1007/978-3-319-59575-7\_42}, timestamp = {Thu, 15 Aug 2024 07:54:35 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AndersenK17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ArtyomenkoISRKZ17, author = {Alexander Artyomenko and Pelin B. Icer and Pavel Skums and Sumathi Ramachandran and Yury Khudyakov and Alex Zelikovsky}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Agent-Based in Silico Evolution of {HCV} Quasispecies}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {420--424}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_45}, doi = {10.1007/978-3-319-59575-7\_45}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ArtyomenkoISRKZ17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChangCYH17, author = {Kuang{-}Yu Chang and Yun Cui and Siu{-}Ming Yiu and Wing{-}Kai Hon}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Reconstructing One-Articulated Networks with Distance Matrices}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {34--45}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_4}, doi = {10.1007/978-3-319-59575-7\_4}, timestamp = {Sat, 16 Sep 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChangCYH17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChenHW17, author = {Zhi{-}Zhong Chen and Youta Harada and Lusheng Wang}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {A New 2-Approximation Algorithm for rSPR Distance}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {128--139}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_12}, doi = {10.1007/978-3-319-59575-7\_12}, timestamp = {Mon, 10 Feb 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ChenHW17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChenJS17, author = {Bolin Chen and Yuqiong Jin and Xuequn Shang}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Net2Image: {A} Network Representation Method for Identifying Cancer-Related Genes}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {337--343}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_31}, doi = {10.1007/978-3-319-59575-7\_31}, timestamp = {Wed, 31 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChenJS17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChenWLWSZ17, author = {Yu Chen and Zihao Wang and Lun Li and Xiaohua Wan and Fei Sun and Fa Zhang}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {A Fully Automatic Geometric Parameters Determining Method for Electron Tomography}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {385--389}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_39}, doi = {10.1007/978-3-319-59575-7\_39}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChenWLWSZ17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/CiachLMLVSG17, author = {Michal Aleksander Ciach and Mateusz Krzysztof Lacki and Blazej Miasojedow and Frederik Lermyte and Dirk Valkenborg and Frank Sobott and Anna Gambin}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Estimation of Rates of Reactions Triggered by Electron Transfer in Top-Down Mass Spectrometry}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {96--107}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_9}, doi = {10.1007/978-3-319-59575-7\_9}, timestamp = {Sat, 19 Oct 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/CiachLMLVSG17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/CuiJML17, author = {Jun Cui and Ning Jiang and Jun Meng and Yushi Luan}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Genome-Wide Analysis of Response Regulator Genes in Solanum lycopersicum}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {379--384}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_38}, doi = {10.1007/978-3-319-59575-7\_38}, timestamp = {Wed, 31 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/CuiJML17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/CzajaE17, author = {Wojciech Czaja and Jeremiah Emidih}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Heterogeneous Cancer Cell Line Data Fusion for Identifying Novel Response Determinants in Precision Medicine}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {414--419}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_44}, doi = {10.1007/978-3-319-59575-7\_44}, timestamp = {Wed, 31 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/CzajaE17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ElhefnawyLWL17, author = {Wessam Elhefnawy and Min Li and Jianxin Wang and Yaohang Li}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Construction of Protein Backbone Fragments Libraries on Large Protein Sets Using a Randomized Spectral Clustering Algorithm}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {108--119}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_10}, doi = {10.1007/978-3-319-59575-7\_10}, timestamp = {Fri, 21 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ElhefnawyLWL17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/FossoPRV17, author = {Bruno Fosso and Graziano Pesole and Francesc Rossell{\'{o}} and Gabriel Valiente}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Unbiased Taxonomic Annotation of Metagenomic Samples}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {162--173}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_15}, doi = {10.1007/978-3-319-59575-7\_15}, timestamp = {Wed, 25 Sep 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/FossoPRV17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GoreckiMMPE17, author = {Pawel G{\'{o}}recki and Alexey Markin and Agnieszka Mykowiecka and Jaroslaw Paszek and Oliver Eulenstein}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Phylogenetic Tree Reconciliation: Mean Values for Fixed Gene Trees}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {234--245}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_21}, doi = {10.1007/978-3-319-59575-7\_21}, timestamp = {Fri, 17 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GoreckiMMPE17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GudenasW17, author = {Brian L. Gudenas and Liangjiang Wang}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {A Genetic Algorithm for Finding Discriminative Functional Motifs in Long Non-coding RNAs}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {408--413}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_43}, doi = {10.1007/978-3-319-59575-7\_43}, timestamp = {Wed, 31 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GudenasW17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GuoLXYWSX17, author = {Kai Guo and Hongfei Lin and Bo Xu and Zhihao Yang and Jian Wang and Yuanyuan Sun and Kan Xu}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Detecting Potential Adverse Drug Reactions Using Association Rules and Embedding Models}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {373--378}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_37}, doi = {10.1007/978-3-319-59575-7\_37}, timestamp = {Fri, 27 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/GuoLXYWSX17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HahnMM17, author = {Alexander Hahn and Somya D. Mohanty and Prashanti Manda}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {What's Hot and What's Not? - Exploring Trends in Bioinformatics Literature Using Topic Modeling and Keyword Analysis}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {279--290}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_25}, doi = {10.1007/978-3-319-59575-7\_25}, timestamp = {Fri, 27 Dec 2019 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/HahnMM17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HeLLYGW17, author = {Zaobo He and Yingshu Li and Ji Li and Jiguo Yu and Hong Gao and Jinbao Wang}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Addressing the Threats of Inference Attacks on Traits and Genotypes from Individual Genomic Data}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {223--233}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_20}, doi = {10.1007/978-3-319-59575-7\_20}, timestamp = {Tue, 01 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HeLLYGW17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HeLW17, author = {Zaobo He and Yingshu Li and Jinbao Wang}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Differential Privacy Preserving Genomic Data Releasing via Factor Graph}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {350--355}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_33}, doi = {10.1007/978-3-319-59575-7\_33}, timestamp = {Wed, 31 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HeLW17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/JhaSZKS17, author = {Deeptanshu Jha and Pavel Skums and Alex Zelikovsky and Yury Khudyakov and Rahul Singh}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Modeling the Spread of {HIV} and {HCV} Infections Based on Identification and Characterization of High-Risk Communities Using Social Media}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {425--430}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_46}, doi = {10.1007/978-3-319-59575-7\_46}, timestamp = {Fri, 27 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/JhaSZKS17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/KhattakSBD17, author = {Naureen Aslam Khattak and Sheikh Arslan Sehgal and Yongsheng Bai and Youping Deng}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Structure Modeling and Molecular Docking Studies of Schizophrenia Candidate Genes, Synapsins 2 {(SYN2)} and Trace Amino Acid Receptor {(TAAR6)}}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {291--301}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_26}, doi = {10.1007/978-3-319-59575-7\_26}, timestamp = {Wed, 31 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/KhattakSBD17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/KimN17, author = {Sangwoo Kim and Hojung Nam}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {In Silico Simulation of Signal Cascades in Biomedical Networks Based on the Production Rule System}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {356--361}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_34}, doi = {10.1007/978-3-319-59575-7\_34}, timestamp = {Fri, 02 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/KimN17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuL17, author = {Wenping Liu and Guangjian Liu}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Mapping Paratope and Epitope Residues of Antibody Pembrolizumab via Molecular Dynamics Simulation}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {120--127}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_11}, doi = {10.1007/978-3-319-59575-7\_11}, timestamp = {Sun, 12 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiuL17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LotfiMV17, author = {Mahsa Lotfi and Burook Misganaw and Mathukumalli Vidyasagar}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Prediction of Time to Tumor Recurrence in Ovarian Cancer: Comparison of Three Sparse Regression Methods}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {1--11}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_1}, doi = {10.1007/978-3-319-59575-7\_1}, timestamp = {Wed, 31 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LotfiMV17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LovingSB17, author = {Joshua Loving and John P. Scaduto and Gary Benson}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {An {SIMD} Algorithm for Wraparound Tandem Alignment}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {140--149}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_13}, doi = {10.1007/978-3-319-59575-7\_13}, timestamp = {Wed, 31 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LovingSB17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MaWZ17, author = {Long Ma and Zhibo Wang and Yanqing Zhang}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Extracting Depression Symptoms from Social Networks and Web Blogs via Text Mining}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {325--330}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_29}, doi = {10.1007/978-3-319-59575-7\_29}, timestamp = {Wed, 05 Apr 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MaWZ17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MandricKPSMZ17, author = {Igor Mandric and Sergey Knyazev and Cory Padilla and Frank Stewart and Ion I. Mandoiu and Alex Zelikovsky}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Metabolic Analysis of Metatranscriptomic Data from Planktonic Communities}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {396--402}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_41}, doi = {10.1007/978-3-319-59575-7\_41}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MandricKPSMZ17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MishraDLRS17, author = {Rashika Mishra and Ovidiu Daescu and Patrick Leavey and Dinesh Rakheja and Anita Sengupta}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Histopathological Diagnosis for Viable and Non-viable Tumor Prediction for Osteosarcoma Using Convolutional Neural Network}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {12--23}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_2}, doi = {10.1007/978-3-319-59575-7\_2}, timestamp = {Sat, 19 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MishraDLRS17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/NgS17, author = {Albert Ng and Dong Si}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Genetic Algorithm Based Beta-Barrel Detection for Medium Resolution Cryo-EM Density Maps}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {174--185}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_16}, doi = {10.1007/978-3-319-59575-7\_16}, timestamp = {Wed, 31 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/NgS17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/NiLZDWLW17, author = {Peng Ni and Min Li and Ping Zhong and Guihua Duan and Jianxin Wang and Yaohang Li and Fang{-}Xiang Wu}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Relating Diseases Based on Disease Module Theory}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {24--33}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_3}, doi = {10.1007/978-3-319-59575-7\_3}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/NiLZDWLW17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/RosaG17, author = {Rog{\'{e}}rio S. Rosa and Katia S. Guimar{\~{a}}es}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Accurate Prediction of Haplotype Inference Errors by Feature Extraction}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {302--313}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_27}, doi = {10.1007/978-3-319-59575-7\_27}, timestamp = {Wed, 31 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/RosaG17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SouzaLA17, author = {Michael Souza and Carlile Lavor and Rafael Alves}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Modeling the Molecular Distance Geometry Problem Using Dihedral Angles}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {270--278}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_24}, doi = {10.1007/978-3-319-59575-7\_24}, timestamp = {Sat, 05 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SouzaLA17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SubramaniamZY17, author = {Meena Subramaniam and Noah Zaitlen and Jimmie Ye}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {PhAT-QTL: {A} Phase-Aware Test for {QTL} Detection}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {150--161}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_14}, doi = {10.1007/978-3-319-59575-7\_14}, timestamp = {Fri, 02 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/SubramaniamZY17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/TropeaVCHPFL17, author = {Augustus N. Tropea and Janey L. Valerio and Michael J. Camerino and Josh Hix and Emmalee Pecor and Peter G. Fuerst and S. Seth Long}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Computer Assisted Segmentation Tool: {A} Machine Learning Based Image Segmenting Tool for TrakEM2}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {246--257}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_22}, doi = {10.1007/978-3-319-59575-7\_22}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/TropeaVCHPFL17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangCZLWLSZ17, author = {Zihao Wang and Yu Chen and Jingrong Zhang and Lun Li and Xiaohua Wan and Zhiyong Liu and Fei Sun and Fa Zhang}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Accelerating Electron Tomography Reconstruction Algorithm {ICON} Using the Intel Xeon Phi Coprocessor on Tianhe-2 Supercomputer}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {258--269}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_23}, doi = {10.1007/978-3-319-59575-7\_23}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangCZLWLSZ17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangYCXLYZ17, author = {Lei Wang and Zhu{-}Hong You and Xing Chen and Shixiong Xia and Feng Liu and Xin Yan and Yong Zhou}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Computational Methods for the Prediction of Drug-Target Interactions from Drug Fingerprints and Protein Sequences by Stacked Auto-Encoder Deep Neural Network}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {46--58}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_5}, doi = {10.1007/978-3-319-59575-7\_5}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangYCXLYZ17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XiaZZFT17, author = {Ruofan Xia and Jun Zhou and Lingxi Zhou and Bing Feng and Jijun Tang}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {A Median Solver and Phylogenetic Inference Based on {DCJ} Sorting}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {211--222}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_19}, doi = {10.1007/978-3-319-59575-7\_19}, timestamp = {Wed, 31 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/XiaZZFT17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XiaoLZXP17, author = {Xiuchun Xiao and Bing Liu and Jing Zhang and Xueli Xiao and Yi Pan}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Detecting Change Points in fMRI Data via Bayesian Inference and Genetic Algorithm Model}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {314--324}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_28}, doi = {10.1007/978-3-319-59575-7\_28}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/XiaoLZXP17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YangG17, author = {Yongxiao Yang and Xinqi Gong}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Understanding Protein-Protein Interface Formation Mechanism in a New Probability Way at Amino Acid Level}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {368--372}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_36}, doi = {10.1007/978-3-319-59575-7\_36}, timestamp = {Wed, 31 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YangG17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YangZS17, author = {Heng Yang and Chunyu Zhao and Ahmet Sacan}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Unfolding the Protein Surface for Pattern Matching}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {84--95}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_8}, doi = {10.1007/978-3-319-59575-7\_8}, timestamp = {Wed, 31 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YangZS17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YuYGP17, author = {Ning Yu and Zeng Yu and Feng Gu and Yi Pan}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Evaluating the Impact of Encoding Schemes on Deep Auto-Encoders for {DNA} Annotation}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {390--395}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_40}, doi = {10.1007/978-3-319-59575-7\_40}, timestamp = {Fri, 03 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/YuYGP17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangAZZCWHYZL17, author = {Li Zhang and Haixin Ai and Qi Zhao and Junfeng Zhu and Wen Chen and Xuewei Wu and Liangchao Huang and Zimo Yin and Jian Zhao and Hongsheng Liu}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Computational Prediction of Influenza Neuraminidase Inhibitors Using Machine Learning Algorithms and Recursive Feature Elimination Method}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {344--349}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_32}, doi = {10.1007/978-3-319-59575-7\_32}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ZhangAZZCWHYZL17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangCW17, author = {Silu Zhang and Yixin Chen and Dawn Wilkins}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {A Probabilistic Approach to Multiple-Instance Learning}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {331--336}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_30}, doi = {10.1007/978-3-319-59575-7\_30}, timestamp = {Wed, 11 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ZhangCW17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangGYYGZC17, author = {Jingsong Zhang and Jianmei Guo and Xiaoqing Yu and Xiangtian Yu and Weifeng Guo and Tao Zeng and Luonan Chen}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Mining K-mers of Various Lengths in Biological Sequences}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {186--195}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_17}, doi = {10.1007/978-3-319-59575-7\_17}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhangGYYGZC17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangW17, author = {Bo Zhang and Yi{-}Chieh Wu}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Coestimation of Gene Trees and Reconciliations Under a Duplication-Loss-Coalescence Model}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {196--210}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_18}, doi = {10.1007/978-3-319-59575-7\_18}, timestamp = {Wed, 31 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhangW17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhaoFZZX17, author = {Jin Zhao and Haodi Feng and Daming Zhu and Chi Zhang and Ying Xu}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {IsoTree: De Novo Transcriptome Assembly from RNA-Seq Reads - (Extended Abstract)}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {71--83}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_7}, doi = {10.1007/978-3-319-59575-7\_7}, timestamp = {Tue, 30 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhaoFZZX17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhouLLZZ17, author = {Wei Zhou and Guangdi Liu and Jun Luo and Tingran Zhang and Le Zhang}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Using the Precision Medicine Analytical Method to Investigate the Impact of the Aerobic Exercise on the Hypertension for the Middle-Aged Women}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {362--367}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_35}, doi = {10.1007/978-3-319-59575-7\_35}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ZhouLLZZ17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhouQS17, author = {Yiqian Zhou and Rehman Qureshi and Ahmet Sacan}, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Analysis of Paired miRNA-mRNA Microarray Expression Data Using a Stepwise Multiple Linear Regression Model}, booktitle = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, pages = {59--70}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7\_6}, doi = {10.1007/978-3-319-59575-7\_6}, timestamp = {Wed, 31 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhouQS17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2017, editor = {Zhipeng Cai and Ovidiu Daescu and Min Li}, title = {Bioinformatics Research and Applications - 13th International Symposium, {ISBRA} 2017, Honolulu, HI, USA, May 29 - June 2, 2017, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {10330}, publisher = {Springer}, year = {2017}, url = {https://doi.org/10.1007/978-3-319-59575-7}, doi = {10.1007/978-3-319-59575-7}, isbn = {978-3-319-59574-0}, timestamp = {Thu, 15 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2017.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AganezovA16, author = {Sergey Aganezov Jr. and Max A. Alekseyev}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Multi-genome Scaffold Co-assembly Based on the Analysis of Gene Orders and Genomic Repeats}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {237--249}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_20}, doi = {10.1007/978-3-319-38782-6\_20}, timestamp = {Tue, 14 May 2019 10:00:51 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AganezovA16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AnishchenkoBDDT16, author = {Ivan V. Anishchenko and Varsha D. Badal and Taras Dauzhenka and Madhurima Das and Alexander V. Tuzikov and Petras J. Kundrotas and Ilya A. Vakser}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Genome-Wide Structural Modeling of Protein-Protein Interactions}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {95--105}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_8}, doi = {10.1007/978-3-319-38782-6\_8}, timestamp = {Sat, 24 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/AnishchenkoBDDT16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BonizzoniVPPR16, author = {Paola Bonizzoni and Gianluca Della Vedova and Yuri Pirola and Marco Previtali and Raffaella Rizzi}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {{FSG:} Fast String Graph Construction for De Novo Assembly of Reads Data}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {27--39}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_3}, doi = {10.1007/978-3-319-38782-6\_3}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BonizzoniVPPR16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/EgorovaGKLOSK16, author = {V. P. Egorova and Halina V. Grushevskaya and N. G. Krylova and I. V. Lipnevich and T. I. Orekhovskaja and Boris G. Shulitski and V. I. Krot}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {High-Performance Sensing of {DNA} Hybridization on Surface of Self-organized MWCNT-Arrays Decorated by Organometallic Complexes}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {52--66}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_5}, doi = {10.1007/978-3-319-38782-6\_5}, timestamp = {Tue, 28 Apr 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/EgorovaGKLOSK16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/EshlemanS16, author = {Ryan Eshleman and Rahul Singh}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Progression Reconstruction from Unsynchronized Biological Data using Cluster Spanning Trees}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {136--147}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_12}, doi = {10.1007/978-3-319-38782-6\_12}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/EshlemanS16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/FlynnS16, author = {Emily Flynn and Ileana Streinu}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Consistent Visualization of Multiple Rigid Domain Decompositions of Proteins}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {151--162}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_13}, doi = {10.1007/978-3-319-38782-6\_13}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/FlynnS16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GoreckiPM16, author = {Pawel G{\'{o}}recki and Jaroslaw Paszek and Agnieszka Mykowiecka}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Mean Values of Gene Duplication and Loss Cost Functions}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {189--199}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_16}, doi = {10.1007/978-3-319-38782-6\_16}, timestamp = {Fri, 17 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GoreckiPM16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Kirkpatrick16, author = {Bonnie Kirkpatrick}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Haplotype Inference for Pedigrees with Few Recombinations}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {269--283}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_23}, doi = {10.1007/978-3-319-38782-6\_23}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Kirkpatrick16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LegeayDR16, author = {Marc Legeay and B{\'{e}}atrice Duval and Jean{-}Pierre Renou}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Differential Functional Analysis and Change Motifs in Gene Networks to Explore the Role of Anti-sense Transcription}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {117--126}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_10}, doi = {10.1007/978-3-319-38782-6\_10}, timestamp = {Sat, 19 Oct 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LegeayDR16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LetuLZZ16, author = {Letu Qingge and Xiaowen Liu and Farong Zhong and Binhai Zhu}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Filling a Protein Scaffold with a Reference}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {175--186}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_15}, doi = {10.1007/978-3-319-38782-6\_15}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LetuLZZ16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiCNWP16, author = {Min Li and Xiaopei Chen and Peng Ni and Jianxin Wang and Yi Pan}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Identifying Essential Proteins by Purifying Protein Interaction Networks}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {106--116}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_9}, doi = {10.1007/978-3-319-38782-6\_9}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiCNWP16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiMLKXYCY16, author = {Menglu Li and Angel C. Y. Mak and Ernest T. Lam and Pui{-}Yan Kwok and Ming Xiao and Kevin Y. Yip and Ting{-}Fung Chan and Siu{-}Ming Yiu}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Towards a More Accurate Error Model for BioNano Optical Maps}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {67--79}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_6}, doi = {10.1007/978-3-319-38782-6\_6}, timestamp = {Wed, 25 Sep 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiMLKXYCY16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Lipinski-PaesTB16, author = {Thiago Lipinski{-}Paes and Michele dos Santos da Silva Tanus and Jos{\'{e}} Fernando Ruggiero Bachega and Osmar Norberto de Souza}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {A Multiagent Ab Initio Protein Structure Prediction Tool for Novices and Experts}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {163--174}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_14}, doi = {10.1007/978-3-319-38782-6\_14}, timestamp = {Fri, 02 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/Lipinski-PaesTB16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LuhmannTOWC16, author = {Nina Luhmann and Annelyse Th{\'{e}}venin and A{\"{\i}}da Ouangraoua and Roland Wittler and C{\'{e}}dric Chauve}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {The {SCJ} Small Parsimony Problem for Weighted Gene Adjacencies}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {200--210}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_17}, doi = {10.1007/978-3-319-38782-6\_17}, timestamp = {Thu, 15 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LuhmannTOWC16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MangulYHTZE16, author = {Serghei Mangul and Harry (Taegyun) Yang and Farhad Hormozdiari and Elizabeth Tseng and Alex Zelikovsky and Eleazar Eskin}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {HapIso: An Accurate Method for the Haplotype-Specific Isoforms Reconstruction from Long Single-Molecule Reads}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {80--92}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_7}, doi = {10.1007/978-3-319-38782-6\_7}, timestamp = {Wed, 25 Sep 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MangulYHTZE16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Marczyk16, author = {Michal Marczyk}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Improved Detection of 2D Gel Electrophoresis Spots by Using Gaussian Mixture Model}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {284--294}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_24}, doi = {10.1007/978-3-319-38782-6\_24}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Marczyk16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MarkinE16, author = {Alexey Markin and Oliver Eulenstein}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Path-Difference Median Trees}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {211--223}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_18}, doi = {10.1007/978-3-319-38782-6\_18}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MarkinE16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MoriyamaSCYIM16, author = {Takuya Moriyama and Yuichi Shiraishi and Kenichi Chiba and Rui Yamaguchi and Seiya Imoto and Satoru Miyano}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {OVarCall: Bayesian Mutation Calling Method Utilizing Overlapping Paired-End Reads}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {40--51}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_4}, doi = {10.1007/978-3-319-38782-6\_4}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MoriyamaSCYIM16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/PengLYWP16, author = {Wei Peng and Wei Lan and Zeng Yu and Jianxin Wang and Yi Pan}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Predicting MicroRNA-Disease Associations by Random Walking on Multiple Networks}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {127--135}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_11}, doi = {10.1007/978-3-319-38782-6\_11}, timestamp = {Tue, 16 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/PengLYWP16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SergeevKGRT16, author = {Roman Sergeev and Ivan Kavaliou and Andrei E. Gabrielian and Alex Rosenthal and Alexander Tuzikov}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Methods for Genome-Wide Analysis of {MDR} and {XDR} Tuberculosis from Belarus}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {258--268}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_22}, doi = {10.1007/978-3-319-38782-6\_22}, timestamp = {Thu, 29 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SergeevKGRT16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ThankachanCA16, author = {Sharma V. Thankachan and Sriram P. Chockalingam and Srinivas Aluru}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {An Efficient Algorithm for Finding All Pairs k-Mismatch Maximal Common Substrings}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {3--14}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_1}, doi = {10.1007/978-3-319-38782-6\_1}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ThankachanCA16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangZLD16, author = {Lu Wang and Dongxiao Zhu and Yan Li and Ming Dong}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Poisson-Markov Mixture Model and Parallel Algorithm for Binning Massive and Heterogenous {DNA} Sequencing Reads}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {15--26}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_2}, doi = {10.1007/978-3-319-38782-6\_2}, timestamp = {Thu, 04 Aug 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangZLD16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YeRJZM16, author = {Min Ye and Gabriela C. Racz and Qijia Jiang and Xiuwei Zhang and Bernard M. E. Moret}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {NEMo: An Evolutionary Model with Modularity for {PPI} Networks}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {224--236}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_19}, doi = {10.1007/978-3-319-38782-6\_19}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YeRJZM16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZaikaDG16, author = {Andrey V. Zaika and Iakov I. Davydov and Mikhail S. Gelfand}, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Selectoscope: {A} Modern Web-App for Positive Selection Analysis of Genomic Data}, booktitle = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, pages = {253--257}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6\_21}, doi = {10.1007/978-3-319-38782-6\_21}, timestamp = {Sat, 19 Oct 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZaikaDG16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2016, editor = {Anu G. Bourgeois and Pavel Skums and Xiang Wan and Alex Zelikovsky}, title = {Bioinformatics Research and Applications - 12th International Symposium, {ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9683}, publisher = {Springer}, year = {2016}, url = {https://doi.org/10.1007/978-3-319-38782-6}, doi = {10.1007/978-3-319-38782-6}, isbn = {978-3-319-38781-9}, timestamp = {Tue, 14 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2016.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Al-NasrH15, author = {Kamal Al{-}Nasr and Jing He}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Deriving Protein Backbone Using Traces Extracted from Density Maps at Medium Resolutions}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {1--11}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_1}, doi = {10.1007/978-3-319-19048-8\_1}, timestamp = {Tue, 14 May 2019 10:00:51 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Al-NasrH15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AyadaNHMI15, author = {Emi Ayada and Atsushi Niida and Takanori Hasegawa and Satoru Miyano and Seiya Imoto}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Binary Contingency Table Method for Analyzing Gene Mutation in Cancer Genome}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {12--23}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_2}, doi = {10.1007/978-3-319-19048-8\_2}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AyadaNHMI15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AzimIRS15, author = {Md. Aashikur Rahman Azim and Costas S. Iliopoulos and M. Sohel Rahman and M. Samiruzzaman}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {A Filter-Based Approach for Approximate Circular Pattern Matching}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {24--35}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_3}, doi = {10.1007/978-3-319-19048-8\_3}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AzimIRS15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BetkierSG15, author = {Arkadiusz Betkier and Pawel Szczesny and Pawel G{\'{o}}recki}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Fast Algorithms for Inferring Gene-Species Associations}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {36--47}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_4}, doi = {10.1007/978-3-319-19048-8\_4}, timestamp = {Fri, 17 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BetkierSG15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BhattacharyyaM15, author = {Sourya Bhattacharyya and Jayanta Mukhopadhyay}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Couplet Supertree Based Species Tree Estimation}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {48--59}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_5}, doi = {10.1007/978-3-319-19048-8\_5}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BhattacharyyaM15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BiswasRZH15, author = {Abhishek Biswas and Desh Ranjan and Mohammad Zubair and Jing He}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {A Novel Computational Method for Deriving Protein Secondary Structure Topologies Using Cryo-EM Density Maps and Multiple Secondary Structure Predictions}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {60--71}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_6}, doi = {10.1007/978-3-319-19048-8\_6}, timestamp = {Fri, 09 Feb 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/BiswasRZH15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BowersJS15, author = {John Christopher Bowers and Rose Tharail John and Ileana Streinu}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Managing Reproducible Computational Experiments with Curated Proteins in {KINARI-2}}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {72--83}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_7}, doi = {10.1007/978-3-319-19048-8\_7}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BowersJS15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DincPA15, author = {Imren Din{\c{c}} and Marc L. Pusey and Ramazan S. Ayg{\"{u}}n}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Protein Crystallization Screening Using Associative Experimental Design}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {84--95}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_8}, doi = {10.1007/978-3-319-19048-8\_8}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DincPA15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GalvaoBD15, author = {Gustavo Rodrigues Galv{\~{a}}o and Christian Baudet and Zanoni Dias}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Sorting Signed Circular Permutations by Super Short Reversals}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {272--283}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_23}, doi = {10.1007/978-3-319-19048-8\_23}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GalvaoBD15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GuoZCDP15, author = {Xuan Guo and Jing Zhang and Zhipeng Cai and Ding{-}Zhu Du and Yi Pan}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {{DAM:} {A} Bayesian Method for Detecting Genome-wide Associations on Multiple Diseases}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {96--107}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_9}, doi = {10.1007/978-3-319-19048-8\_9}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GuoZCDP15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HeWP15, author = {Dan He and Zhanyong Wang and Laxmi Parida}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {{MINED:} An Efficient Mutual Information Based Epistasis Detection Method to Improve Quantitative Genetic Trait Prediction}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {108--124}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_10}, doi = {10.1007/978-3-319-19048-8\_10}, timestamp = {Tue, 27 Mar 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HeWP15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HerndonC15, author = {Nic Herndon and Doina Caragea}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Domain Adaptation with Logistic Regression for the Task of Splice Site Prediction}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {125--137}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_11}, doi = {10.1007/978-3-319-19048-8\_11}, timestamp = {Sun, 25 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HerndonC15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HuMSAH15, author = {Qiwen Hu and Catharina Merchante and Anna N. Stepanova and Jos{\'{e}} M. Alonso and Steffen Heber}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {A Stacking-Based Approach to Identify Translated Upstream Open Reading Frames in Arabidopsis Thaliana}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {138--149}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_12}, doi = {10.1007/978-3-319-19048-8\_12}, timestamp = {Sat, 19 Oct 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HuMSAH15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HuangJJW15, author = {Yuanyuan Huang and Kejue Jia and Robert L. Jernigan and Zhijun Wu}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {{PRESS-PLOT:} An Online Server for Protein Structural Analysis and Evaluation with Residue-level Virtual Angle Correlation Plots}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {150--161}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_13}, doi = {10.1007/978-3-319-19048-8\_13}, timestamp = {Mon, 28 Nov 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/HuangJJW15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/JiLW15, author = {Hao Ji and Yaohang Li and Seth H. Weinberg}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Calcium Ion Fluctuations Alter Channel Gating in a Stochastic Luminal Calcium Release Site Model}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {162--174}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_14}, doi = {10.1007/978-3-319-19048-8\_14}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/JiLW15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/KordiB15, author = {Misagh Kordi and Mukul S. Bansal}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {On the Complexity of Duplication-Transfer-Loss Reconciliation with Non-binary Gene Trees}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {187--198}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_16}, doi = {10.1007/978-3-319-19048-8\_16}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/KordiB15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiCYHTLTWY15, author = {Menglu Li and Micheal Cheng and Yongtao Ye and Wing{-}Kai Hon and Hing{-}Fung Ting and Tak Wah Lam and Cy Tang and Thomas Wong and Siu{-}Ming Yiu}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Predicting {RNA} Secondary Structures: One-grammar-fits-all Solution}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {211--222}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_18}, doi = {10.1007/978-3-319-19048-8\_18}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiCYHTLTWY15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiNLL15, author = {Jin Li and Yen Kaow Ng and Xingwu Liu and Shuai Cheng Li}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {On the Near-Linear Correlation of the Eigenvalues Across {BLOSUM} Matrices}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {199--210}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_17}, doi = {10.1007/978-3-319-19048-8\_17}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiNLL15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuSLMZ15, author = {Yi Liu and Weiping Sun and Gilles A. Lajoie and Bin Ma and Kaizhong Zhang}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {An Approach for Matching Mixture {MS/MS} Spectra with a Pair of Peptide Sequences in a Protein Database}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {223--234}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_19}, doi = {10.1007/978-3-319-19048-8\_19}, timestamp = {Mon, 13 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiuSLMZ15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MakinenV15, author = {Veli M{\"{a}}kinen and Daniel Valenzuela}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Diploid Alignments and Haplotyping}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {235--246}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_20}, doi = {10.1007/978-3-319-19048-8\_20}, timestamp = {Wed, 20 Dec 2017 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/MakinenV15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MolloyS15, author = {Kevin Molloy and Amarda Shehu}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Interleaving Global and Local Search for Protein Motion Computation}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {175--186}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_15}, doi = {10.1007/978-3-319-19048-8\_15}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MolloyS15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/NunesVFBC15, author = {Vinicius Schmitz Nunes and Eveline Gomes Vasconcelos and Priscila Faria{-}Pinto and Carlos Cristiano H. Borges and Priscila V. S. Z. Capriles}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Structural Comparative Analysis of Ecto- NTPDase Models from S. Mansoni and H. Sapiens}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {247--259}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_21}, doi = {10.1007/978-3-319-19048-8\_21}, timestamp = {Mon, 06 Nov 2017 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/NunesVFBC15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/RajaramanCP15, author = {Ashok Rajaraman and C{\'{e}}dric Chauve and Yann Ponty}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Assessing the Robustness of Parsimonious Predictions for Gene Neighborhoods from Reconciled Phylogenies: Supplementary Material}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {260--271}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_22}, doi = {10.1007/978-3-319-19048-8\_22}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/RajaramanCP15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/RoyPM15, author = {Kaushik Roy and Satish Chandra Panigrahi and Asish Mukhopadhyay}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Multiple Alignment of Structures Using Center Of ProTeins}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {284--296}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_24}, doi = {10.1007/978-3-319-19048-8\_24}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/RoyPM15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SahaR15, author = {Subrata Saha and Sanguthevar Rajasekaran}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {{NRRC:} {A} Non-referential Reads Compression Algorithm}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {297--308}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_25}, doi = {10.1007/978-3-319-19048-8\_25}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SahaR15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ShafinKRAKHR15, author = {Md. Kishwar Shafin and Kazi Lutful Kabir and Iffatur Ridwan and Tasmiah Tamzid Anannya and Rashid Saadman Karim and Mohammad Mozammel Hoque and M. Sohel Rahman}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {New Heuristics for Clustering Large Biological Networks}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {309--319}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_26}, doi = {10.1007/978-3-319-19048-8\_26}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ShafinKRAKHR15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SunLMZ15, author = {Weiping Sun and Gilles A. Lajoie and Bin Ma and Kaizhong Zhang}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {A Novel Algorithm for Glycan de novo Sequencing Using Tandem Mass Spectrometry}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {320--330}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_27}, doi = {10.1007/978-3-319-19048-8\_27}, timestamp = {Mon, 13 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/SunLMZ15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/TangiralaHC15, author = {Karthik Tangirala and Nic Herndon and Doina Caragea}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Community Detection-Based Feature Construction for Protein Sequence Classification}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {331--342}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_28}, doi = {10.1007/978-3-319-19048-8\_28}, timestamp = {Sun, 25 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/TangiralaHC15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XuC15, author = {Jing Xu and Andrey N. Chernikov}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Curvilinear Triangular Discretization of Biomedical Images}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {343--354}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_29}, doi = {10.1007/978-3-319-19048-8\_29}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/XuC15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YangDCHCX15, author = {Yubo Yang and Cuihong Dai and Zhipeng Cai and Aiju Hou and Dayou Cheng and Dechang Xu}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {The Role of miRNAs in Cisplatin-Resistant HeLa Cells}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {355--365}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_30}, doi = {10.1007/978-3-319-19048-8\_30}, timestamp = {Wed, 14 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YangDCHCX15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YuGGP15, author = {Ning Yu and Xuan Guo and Feng Gu and Yi Pan}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {{DNA} {AS} {X:} An Information-Coding-Based Model to Improve the Sensitivity in Comparative Gene Analysis}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {366--377}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_31}, doi = {10.1007/978-3-319-19048-8\_31}, timestamp = {Fri, 03 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/YuGGP15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YuN15, author = {Yun Yu and Luay Nakhleh}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {A Distance-Based Method for Inferring Phylogenetic Networks in the Presence of Incomplete Lineage Sorting}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {378--389}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_32}, doi = {10.1007/978-3-319-19048-8\_32}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YuN15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhaoWWP15, author = {Bihai Zhao and Jianxin Wang and Fang{-}Xiang Wu and Yi Pan}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Predicting Protein Functions Based on Dynamic Protein Interaction Networks}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {390--401}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_33}, doi = {10.1007/978-3-319-19048-8\_33}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhaoWWP15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhouLHT15, author = {Jun Zhou and Yu Lin and William Hoskins and Jijun Tang}, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {An Iterative Approach for Phylogenetic Analysis of Tumor Progression Using {FISH} Copy Number}, booktitle = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, pages = {402--412}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8\_34}, doi = {10.1007/978-3-319-19048-8\_34}, timestamp = {Tue, 31 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhouLHT15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2015, editor = {Robert W. Harrison and Yaohang Li and Ion I. Mandoiu}, title = {Bioinformatics Research and Applications - 11th International Symposium, {ISBRA} 2015, Norfolk, VA, USA, June 7-10, 2015 Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9096}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-319-19048-8}, doi = {10.1007/978-3-319-19048-8}, isbn = {978-3-319-19047-1}, timestamp = {Tue, 14 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2015.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AcerbiS14, author = {Enzo Acerbi and Fabio Stella}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Continuous Time Bayesian Networks for Gene Network Reconstruction: {A} Comparative Study on Time Course Data}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {176--187}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_16}, doi = {10.1007/978-3-319-08171-7\_16}, timestamp = {Sun, 17 Dec 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/AcerbiS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AhmedM14, author = {Syed Ali Ahmed and Saad Mneimneh}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Multiple {RNA} Interaction with Sub-optimal Solutions}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {149--162}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_14}, doi = {10.1007/978-3-319-08171-7\_14}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AhmedM14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Al-RajabL14, author = {Murad M. Al{-}Rajab and Joan Lu}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Algorithms Implemented for Cancer Gene Searching and Classifications}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {59--70}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_6}, doi = {10.1007/978-3-319-08171-7\_6}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Al-RajabL14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChenRWWZ14, author = {Yu Chen and Fei Ren and Xiaohua Wan and Xuan Wang and Fa Zhang}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {An Improved Correlation Method Based on Rotation Invariant Feature for Automatic Particle Selection}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {114--125}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_11}, doi = {10.1007/978-3-319-08171-7\_11}, timestamp = {Wed, 14 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChenRWWZ14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChenX14, author = {Yang Chen and Rong Xu}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Network Analysis of Human Disease Comorbidity Patterns Based on Large-Scale Data Mining}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {243--254}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_22}, doi = {10.1007/978-3-319-08171-7\_22}, timestamp = {Wed, 16 Mar 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ChenX14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DengZ14, author = {Nan Deng and Dongxiao Zhu}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {dSpliceType: {A} Multivariate Model for Detecting Various Types of Differential Splicing Events Using RNA-Seq}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {322--333}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_29}, doi = {10.1007/978-3-319-08171-7\_29}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DengZ14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DingGZLW14, author = {Xiaojun Ding and Haihua Gu and Zhen Zhang and Min Li and Fang{-}Xiang Wu}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Searching {SNP} Combinations Related to Evolutionary Information of Human Populations on HapMap Data}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {278--288}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_25}, doi = {10.1007/978-3-319-08171-7\_25}, timestamp = {Wed, 17 Jul 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DingGZLW14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ForouzeshKM14, author = {Negin Forouzesh and Mohammad Reza Kazemi and Ali Mohades}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Structure-Based Analysis of Protein Binding Pockets Using Von Neumann Entropy}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {301--309}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_27}, doi = {10.1007/978-3-319-08171-7\_27}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ForouzeshKM14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GoreckiPE14, author = {Pawel G{\'{o}}recki and Jaroslaw Paszek and Oliver Eulenstein}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Duplication Cost Diameters}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {212--223}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_19}, doi = {10.1007/978-3-319-08171-7\_19}, timestamp = {Fri, 17 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GoreckiPE14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HokszaS14, author = {David Hoksza and Petr Skoda}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {2D Pharmacophore Query Generation}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {289--300}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_26}, doi = {10.1007/978-3-319-08171-7\_26}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/HokszaS14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Hu14, author = {Wei Hu}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Functional Interplay between Hemagglutinin and Neuraminidase of Pandemic 2009 {H1N1} from the Perspective of Virus Evolution}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {38--49}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_4}, doi = {10.1007/978-3-319-08171-7\_4}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Hu14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HuY14, author = {Jing Hu and Xianghe Yan}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Predicting Protein Submitochondrial Locations Using a K-Nearest Neighbors Method Based on the Bit-Score Weighted Euclidean Distance}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {50--58}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_5}, doi = {10.1007/978-3-319-08171-7\_5}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HuY14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/JiangHX14, author = {Xingpeng Jiang and Xiaohua Hu and Weiwei Xu}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Joint Analysis of Functional and Phylogenetic Composition for Human Microbiome Data}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {346--356}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_31}, doi = {10.1007/978-3-319-08171-7\_31}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/JiangHX14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiB14, author = {Xiao{-}Bo Li and Forbes J. Burkowski}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Conformational Transitions and Principal Geodesic Analysis on the Positive Semidefinite Matrix Manifold}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {334--345}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_30}, doi = {10.1007/978-3-319-08171-7\_30}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiB14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiLNWP14, author = {Min Li and Yu Lu and Zhibei Niu and Fang{-}Xiang Wu and Yi Pan}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Identification of Essential Proteins by Using Complexes and Interaction Network}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {255--265}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_23}, doi = {10.1007/978-3-319-08171-7\_23}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiLNWP14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuMZL14, author = {Yi Liu and Bin Ma and Kaizhong Zhang and Gilles A. Lajoie}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {An Effective Algorithm for Peptide de novo Sequencing from Mixture {MS/MS} Spectra}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {126--137}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_12}, doi = {10.1007/978-3-319-08171-7\_12}, timestamp = {Mon, 13 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiuMZL14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuWZ14, author = {Mingming Liu and Layne T. Watson and Liqing Zhang}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Classification of Mutations by Functional Impact Type: Gain of Function, Loss of Function, and Switch of Function}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {236--242}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_21}, doi = {10.1007/978-3-319-08171-7\_21}, timestamp = {Fri, 20 Jan 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiuWZ14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LuDHCCX14, author = {Xiyuan Lu and Cuihong Dai and Aiju Hou and Jie Cui and Dayou Cheng and Dechang Xu}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Dysregulated microRNA Profile in HeLa Cell Lines Induced by Lupeol}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {71--80}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_7}, doi = {10.1007/978-3-319-08171-7\_7}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LuDHCCX14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/PanigrahiM14, author = {Satish Ch. Panigrahi and Asish Mukhopadhyay}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {An Eigendecomposition Method for Protein Structure Alignment}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {24--37}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_3}, doi = {10.1007/978-3-319-08171-7\_3}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/PanigrahiM14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SteipeT14, author = {Boris Steipe and Bhooma Thiruv}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {schematikon: Detailed Sequence-Structure Relationships from Mining a Non-redundant Protein Structure Database - (Extended Abstract)}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {357--366}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_32}, doi = {10.1007/978-3-319-08171-7\_32}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SteipeT14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SunKT14, author = {Shuhao Sun and Fima C. Klebaner and Tianhai Tian}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {A New Mathematical Model for Inbreeding Depression in Large Populations}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {310--321}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_28}, doi = {10.1007/978-3-319-08171-7\_28}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/SunKT14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SunZWCDW14, author = {Ying Sun and Chunguang Zhou and Jiaxin Wang and Zhongbo Cao and Wei Du and Yan Wang}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Computational Prediction of Human Saliva-Secreted Proteins}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {92--101}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_9}, doi = {10.1007/978-3-319-08171-7\_9}, timestamp = {Thu, 30 Aug 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SunZWCDW14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/UlfenborgKO14, author = {Benjamin Ulfenborg and Karin Klinga{-}Levan and Bj{\"{o}}rn Olsson}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {GenoScan: Genomic Scanner for Putative miRNA Precursors}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {266--277}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_24}, doi = {10.1007/978-3-319-08171-7\_24}, timestamp = {Sat, 19 Oct 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/UlfenborgKO14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WuSLW14, author = {Lin Wu and Yichao Shen and Min Li and Fang{-}Xiang Wu}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Drug Target Identification Based on Structural Output Controllability of Complex Networks}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {188--199}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_17}, doi = {10.1007/978-3-319-08171-7\_17}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WuSLW14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Xia14, author = {Xuhua Xia}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Phylogenetic Bias in the Likelihood Method Caused by Missing Data Coupled with Among-Site Rate Variation: An Analytical Approach}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {12--23}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_2}, doi = {10.1007/978-3-319-08171-7\_2}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Xia14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/XuCLZODHCL14, author = {Dechang Xu and Zhipeng Cai and Ke Liu and Xiangmiao Zeng and Yujing Ouyang and Cuihong Dai and Aiju Hou and Dayou Cheng and Jianzhong Li}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {A Simulation for Proportional Biological Operational Mu-Circuit}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {81--91}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_8}, doi = {10.1007/978-3-319-08171-7\_8}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/XuCLZODHCL14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YanKW14, author = {Yan Yan and Anthony J. Kusalik and Fang{-}Xiang Wu}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {NovoGMET: De Novo Peptide Sequencing Using Graphs with Multiple Edge Types {(GMET)} for {ETD/ECD} Spectra}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {200--211}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_18}, doi = {10.1007/978-3-319-08171-7\_18}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YanKW14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YangYZZ14, author = {Jing Yang and Dengju Yao and Xiaojuan Zhan and Xiaorong Zhan}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Predicting Disease Risks Using Feature Selection Based on Random Forest and Support Vector Machine}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {1--11}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_1}, doi = {10.1007/978-3-319-08171-7\_1}, timestamp = {Sun, 05 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/YangYZZ14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YueWXC14, author = {Zongliang Yue and Ping Wan and Zhan Xie and Jake Y. Chen}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Computational Identification of De-Centric Genetic Regulatory Relationships from Functional Genomic Data}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {224--235}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_20}, doi = {10.1007/978-3-319-08171-7\_20}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YueWXC14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangWZRWL14, author = {Jingrong Zhang and Xiaohua Wan and Fa Zhang and Fei Ren and Xuan Wang and Zhiyong Liu}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {A Parallel Scheme for Three-Dimensional Reconstruction in Large-Field Electron Tomography}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {102--113}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_10}, doi = {10.1007/978-3-319-08171-7\_10}, timestamp = {Wed, 14 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhangWZRWL14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhuYH14, author = {Lin Zhu and Zhu{-}Hong You and De{-}Shuang Huang}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Identifying Spurious Interactions in the Protein-Protein Interaction Networks Using Local Similarity Preserving Embedding}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {138--148}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_13}, doi = {10.1007/978-3-319-08171-7\_13}, timestamp = {Fri, 27 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ZhuYH14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZohoraR14, author = {Fatema Tuz Zohora and M. Sohel Rahman}, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Application of Consensus String Matching in the Diagnosis of Allelic Heterogeneity - (Extended Abstract)}, booktitle = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, pages = {163--175}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7\_15}, doi = {10.1007/978-3-319-08171-7\_15}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZohoraR14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2014, editor = {Mitra Basu and Yi Pan and Jianxin Wang}, title = {Bioinformatics Research and Applications - 10th International Symposium, {ISBRA} 2014, Zhangjiajie, China, June 28-30, 2014. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {8492}, publisher = {Springer}, year = {2014}, url = {https://doi.org/10.1007/978-3-319-08171-7}, doi = {10.1007/978-3-319-08171-7}, isbn = {978-3-319-08170-0}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2014.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AshtawyM13, author = {Hossam M. Ashtawy and Nihar R. Mahapatra}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Does Accurate Scoring of Ligands against Protein Targets Mean Accurate Ranking?}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {298--310}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_29}, doi = {10.1007/978-3-642-38036-5\_29}, timestamp = {Thu, 20 Aug 2020 15:56:19 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AshtawyM13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Berger-Wolf13, author = {Tanya Y. Berger{-}Wolf}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Computational Behavioral Ecology}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {3}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_3}, doi = {10.1007/978-3-642-38036-5\_3}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Berger-Wolf13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Chen13, author = {Luonan Chen}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Identifying Critical Transitions of Biological Processes by Dynamical Network Biomarkers}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {2}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_2}, doi = {10.1007/978-3-642-38036-5\_2}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Chen13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/CrepinHKTR13, author = {Laurent Cr{\'{e}}pin and Fabrice Harrouet and S{\'{e}}bastien Kerd{\'{e}}lo and Jacques Tisseau and Pascal Redou}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Computational Methods for the Parallel 3D Simulation of Biochemical Kinetics at the Microscopic Scale}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {28--39}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_7}, doi = {10.1007/978-3-642-38036-5\_7}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/CrepinHKTR13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DingRMC13, author = {Liang Ding and Joseph Robertson and Russell L. Malmberg and Liming Cai}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Protein Closed Loop Prediction from Contact Probabilities}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {199--210}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_21}, doi = {10.1007/978-3-642-38036-5\_21}, timestamp = {Fri, 10 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/DingRMC13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GuoDYP13, author = {Xuan Guo and Xiaojun Ding and Meng Yu and Yi Pan}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Cloud Computing for \emph{De Novo} Metagenomic Sequence Assembly}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {185--198}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_20}, doi = {10.1007/978-3-642-38036-5\_20}, timestamp = {Thu, 08 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GuoDYP13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Harvey13, author = {Stephen C. Harvey}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Unusual {RNA} Structures: Information Content in RNAs from the "Prebiotic Ribosome" to Modern Viruses}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {4}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_4}, doi = {10.1007/978-3-642-38036-5\_4}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Harvey13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HauserKIMMGS13, author = {J{\"{o}}rg Hauser and Kassian Kobert and Fernando Izquierdo{-}Carrasco and Karen Meusemann and Bernhard Misof and Michael Gertz and Alexandros Stamatakis}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Heuristic Algorithms for the Protein Model Assignment Problem}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {137--148}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_16}, doi = {10.1007/978-3-642-38036-5\_16}, timestamp = {Mon, 07 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/HauserKIMMGS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HuZT13, author = {Fei Hu and Lingxi Zhou and Jijun Tang}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Reconstructing Ancestral Genomic Orders Using Binary Encoding and Probabilistic Models}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {17--27}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_6}, doi = {10.1007/978-3-642-38036-5\_6}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HuZT13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HuffnerKLN13, author = {Falk H{\"{u}}ffner and Christian Komusiewicz and Adrian Liebtrau and Rolf Niedermeier}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Partitioning Biological Networks into Highly Connected Clusters with Maximum Edge Coverage}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {99--111}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_13}, doi = {10.1007/978-3-642-38036-5\_13}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HuffnerKLN13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/JayBC13, author = {Jeremy J. Jay and Erich J. Baker and Elissa J. Chesler}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {A Context-Driven Gene Prioritization Method for Web-Based Functional Genomics}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {161--172}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_18}, doi = {10.1007/978-3-642-38036-5\_18}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/JayBC13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/KanjXZ13, author = {Iyad A. Kanj and Ge Xia and Binhai Zhu}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {The Radiation Hybrid Map Construction Problem Is {FPT}}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {5--16}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_5}, doi = {10.1007/978-3-642-38036-5\_5}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/KanjXZ13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuCTLY13, author = {Xuan Liu and David Wai{-}Lok Cheung and Hing{-}Fung Ting and Tak Wah Lam and Siu{-}Ming Yiu}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {LCR{\_}Finder: {A} de Novo Low Copy Repeat Finder for Human Genome}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {125--136}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_15}, doi = {10.1007/978-3-642-38036-5\_15}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiuCTLY13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuCZDKR13, author = {Wenting Liu and Kuiyu Chang and Jie Zheng and Jain Divya and Jung{-}Jae Kim and Jagath C. Rajapakse}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Gene Regulatory Networks from Gene Ontology}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {87--98}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_12}, doi = {10.1007/978-3-642-38036-5\_12}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiuCZDKR13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Ma13, author = {Bin Ma}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Peptide Identification from Mass Spectrometry}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {1}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_1}, doi = {10.1007/978-3-642-38036-5\_1}, timestamp = {Mon, 13 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/Ma13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MundraZNWR13, author = {Piyushkumar A. Mundra and Jie Zheng and Mahesan Niranjan and Roy E. Welsch and Jagath C. Rajapakse}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Inferring Time-Delayed Gene Regulatory Networks Using Cross-Correlation and Sparse Regression}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {64--75}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_10}, doi = {10.1007/978-3-642-38036-5\_10}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MundraZNWR13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/NaS13, author = {Hyuntae Na and Guang Song}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Ellipsoid-Weighted Protein Conformation Alignment}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {273--285}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_27}, doi = {10.1007/978-3-642-38036-5\_27}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/NaS13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/NasrLRB13, author = {Kamal Al{-}Nasr and Chunmei Liu and Mugizi Robert Rwebangira and Legand Burge}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {A Graph Approach to Bridge the Gaps in Volumetric Electron Cryo-microscopy Skeletons}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {211--223}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_22}, doi = {10.1007/978-3-642-38036-5\_22}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/NasrLRB13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SkumsGZDRGK13, author = {Pavel Skums and Olga Glebova and Alex Zelikovsky and Zoya Dimitrova and David Stiven Campo Rendon and Lilia Ganova{-}Raeva and Yuri Khudyakov}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Alignment of {DNA} Mass-Spectral Profiles Using Network Flows}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {149--160}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_17}, doi = {10.1007/978-3-642-38036-5\_17}, timestamp = {Wed, 25 Sep 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SkumsGZDRGK13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SongLSYW13, author = {Xuebo Song and Lin Li and Pradip K. Srimani and Philip S. Yu and James Z. Wang}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Measure the Semantic Similarity of {GO} Terms Using Aggregate Information Content}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {224--236}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_23}, doi = {10.1007/978-3-642-38036-5\_23}, timestamp = {Wed, 19 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/SongLSYW13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SrivastavaZLCM13, author = {Anuj Srivastava and Xiaoyu Zhang and Sal LaMarca and Liming Cai and Russell L. Malmberg}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Patterns of Chromatin-Modifications Discriminate Different Genomic Features in \emph{Arabidopsis}}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {52--63}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_9}, doi = {10.1007/978-3-642-38036-5\_9}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SrivastavaZLCM13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ValimakiR13, author = {Niko V{\"{a}}lim{\"{a}}ki and Eric Rivals}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Scalable and Versatile \emph{k}-mer Indexing for High-Throughput Sequencing Data}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {237--248}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_24}, doi = {10.1007/978-3-642-38036-5\_24}, timestamp = {Thu, 15 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ValimakiR13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/VoP13, author = {Nam S. Vo and Vinhthuy Phan}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Exploiting Dependencies of Patterns in Gene Expression Analysis Using Pairwise Comparisons}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {173--184}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_19}, doi = {10.1007/978-3-642-38036-5\_19}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/VoP13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/VuCHLSSY13, author = {Hoa Vu and Francis Y. L. Chin and Wing{-}Kai Hon and Henry C. M. Leung and Kunihiko Sadakane and Ken Wing{-}Kin Sung and Siu{-}Ming Yiu}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Reconstructing \emph{k}-Reticulated Phylogenetic Network from a Set of Gene Trees}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {112--124}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_14}, doi = {10.1007/978-3-642-38036-5\_14}, timestamp = {Fri, 27 Dec 2019 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/VuCHLSSY13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WiesekeLLM13, author = {Nicolas Wieseke and Marcus Lechner and Marcus Ludwig and Manja Marz}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {{POMAGO:} Multiple Genome-Wide Alignment Tool for Bacteria}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {249--260}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_25}, doi = {10.1007/978-3-642-38036-5\_25}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WiesekeLLM13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZengLXZQDHX13, author = {Xiangmiao Zeng and Ke Liu and Fangping Xie and Ying Zhang and Lei Qiao and Cuihong Dai and Aiju Hou and Dechang Xu}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {A Simulation of Synthetic \emph{agr} System in \emph{E.coli}}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {76--86}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_11}, doi = {10.1007/978-3-642-38036-5\_11}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZengLXZQDHX13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhaoWWP13, author = {Bihai Zhao and Jianxin Wang and Fang{-}Xiang Wu and Yi Pan}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Construction of Uncertain Protein-Protein Interaction Networks and Its Applications}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {286--297}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_28}, doi = {10.1007/978-3-642-38036-5\_28}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhaoWWP13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhengZ13, author = {Yu Zheng and Louxin Zhang}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {A Tool for Non-binary Tree Reconciliation}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {40--51}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_8}, doi = {10.1007/978-3-642-38036-5\_8}, timestamp = {Tue, 12 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhengZ13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhengZ13a, author = {Yu Zheng and Louxin Zhang}, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Effect of Incomplete Lineage Sorting on Tree-Reconciliation-Based Inference of Gene Duplication}, booktitle = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, pages = {261--272}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5\_26}, doi = {10.1007/978-3-642-38036-5\_26}, timestamp = {Tue, 12 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhengZ13a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2013, editor = {Zhipeng Cai and Oliver Eulenstein and Daniel Janies and Daniel Schwartz}, title = {Bioinformatics Research and Applications, 9th International Symposium, {ISBRA} 2013, Charlotte, NC, USA, May 20-22, 2013. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7875}, publisher = {Springer}, year = {2013}, url = {https://doi.org/10.1007/978-3-642-38036-5}, doi = {10.1007/978-3-642-38036-5}, isbn = {978-3-642-38035-8}, timestamp = {Thu, 20 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2013.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Al-TuraikiBM12, author = {Isra Al{-}Turaiki and Ghada Badr and Hassan Mathkour}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Trie-based Apriori Motif Discovery Approach}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {1--12}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_1}, doi = {10.1007/978-3-642-30191-9\_1}, timestamp = {Tue, 14 May 2019 10:00:51 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Al-TuraikiBM12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BulteauJ12, author = {Laurent Bulteau and Minghui Jiang}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Inapproximability of (1, 2)-Exemplar Distance}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {13--23}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_2}, doi = {10.1007/978-3-642-30191-9\_2}, timestamp = {Sun, 25 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BulteauJ12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/CatanzaroLH12, author = {Daniele Catanzaro and Martine Labb{\'{e}} and Bjarni V. Halld{\'{o}}rsson}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {A Mixed Integer Programming Model for the Parsimonious Loss of Heterozygosity Problem}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {24--35}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_3}, doi = {10.1007/978-3-642-30191-9\_3}, timestamp = {Sat, 19 Oct 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/CatanzaroLH12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChenWSRCX12, author = {Xi Chen and Chen Wang and Ayesha N. Shajahan and Rebecca B. Riggins and Robert Clarke and Jianhua Xuan}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Reconstruction of Transcription Regulatory Networks by Stability-Based Network Component Analysis}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {36--47}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_4}, doi = {10.1007/978-3-642-30191-9\_4}, timestamp = {Thu, 19 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChenWSRCX12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChristinatM12, author = {Yann Christinat and Bernard M. E. Moret}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {A Transcript Perspective on Evolution}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {48--59}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_5}, doi = {10.1007/978-3-642-30191-9\_5}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChristinatM12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/CrosbyW12, author = {Ralph W. Crosby and Tiffani L. Williams}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {A Fast Algorithm for Computing the Quartet Distance for Large Sets of Evolutionary Trees}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {60--71}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_6}, doi = {10.1007/978-3-642-30191-9\_6}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/CrosbyW12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DamaschkeM12, author = {Peter Damaschke and Leonid Molokov}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Error Propagation in Sparse Linear Systems with Peptide-Protein Incidence Matrices}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {72--83}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_7}, doi = {10.1007/978-3-642-30191-9\_7}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DamaschkeM12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DasGupta12, author = {Bhaskar DasGupta}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Models and Algorithmic Tools for Computational Processes in Cellular Biology: Recent Developments and Future Directions - (Invited Keynote Talk)}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {84--86}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_8}, doi = {10.1007/978-3-642-30191-9\_8}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DasGupta12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DeepakDF12, author = {Akshay Deepak and Jianrong Dong and David Fern{\'{a}}ndez{-}Baca}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Identifying Rogue Taxa through Reduced Consensus: NP-Hardness and Exact Algorithms}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {87--98}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_9}, doi = {10.1007/978-3-642-30191-9\_9}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DeepakDF12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Gibas12, author = {Cynthia Gibas}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Analytics Approaches for the Era of 10, 000* Genomes *and Counting}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {99--101}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_10}, doi = {10.1007/978-3-642-30191-9\_10}, timestamp = {Sun, 02 Jun 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Gibas12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GoreckiBE12, author = {Pawel G{\'{o}}recki and J. Gordon Burleigh and Oliver Eulenstein}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {{GTP} Supertrees from Unrooted Gene Trees: Linear Time Algorithms for {NNI} Based Local Searches}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {102--114}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_11}, doi = {10.1007/978-3-642-30191-9\_11}, timestamp = {Fri, 17 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GoreckiBE12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GoreckiE12, author = {Pawel G{\'{o}}recki and Oliver Eulenstein}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {A Robinson-Foulds Measure to Compare Unrooted Trees with Rooted Trees}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {115--126}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_12}, doi = {10.1007/978-3-642-30191-9\_12}, timestamp = {Fri, 17 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GoreckiE12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GuoLW12, author = {Fei Guo and Shuai Cheng Li and Lusheng Wang}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {P-Binder: {A} System for the Protein-Protein Binding Sites Identification}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {127--138}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_13}, doi = {10.1007/978-3-642-30191-9\_13}, timestamp = {Tue, 12 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GuoLW12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Kirkpatrick12, author = {Bonnie Kirkpatrick}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Non-identifiable Pedigrees and a Bayesian Solution}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {139--152}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_14}, doi = {10.1007/978-3-642-30191-9\_14}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Kirkpatrick12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiCK12, author = {Juntao Li and Kwok Pui Choi and R. Krishna Murthy Karuturi}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Iterative Piecewise Linear Regression to Accurately Assess Statistical Significance in Batch Confounded Differential Expression Analysis}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {153--164}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_15}, doi = {10.1007/978-3-642-30191-9\_15}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiCK12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiCWZ12, author = {Si Li and Kwok Pui Choi and Taoyang Wu and Louxin Zhang}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Reconstruction of Network Evolutionary History from Extant Network Topology and Duplication History}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {165--176}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_16}, doi = {10.1007/978-3-642-30191-9\_16}, timestamp = {Mon, 04 Jul 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiCWZ12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MissirianHCF12, author = {Victor Missirian and Isabelle Henry and Luca Comai and Vladimir Filkov}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {{POPE:} Pipeline of Parentally-Biased Expression}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {177--188}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_17}, doi = {10.1007/978-3-642-30191-9\_17}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MissirianHCF12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/NovakHLS12, author = {Jir{\'{\i}} Nov{\'{a}}k and David Hoksza and Jakub Lokoc and Tom{\'{a}}s Skopal}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {On Optimizing the Non-metric Similarity Search in Tandem Mass Spectra by Clustering}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {189--200}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_18}, doi = {10.1007/978-3-642-30191-9\_18}, timestamp = {Sat, 18 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/NovakHLS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/OuangraouaSB12, author = {A{\"{\i}}da Ouangraoua and Krister M. Swenson and Anne Bergeron}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {On the Comparison of Sets of Alternative Transcripts}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {201--212}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_19}, doi = {10.1007/978-3-642-30191-9\_19}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/OuangraouaSB12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ParkN12, author = {Hyun Jung Park and Luay Nakhleh}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {{MURPAR:} {A} Fast Heuristic for Inferring Parsimonious Phylogenetic Networks from Multiple Gene Trees}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {213--224}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_20}, doi = {10.1007/978-3-642-30191-9\_20}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ParkN12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ReV12, author = {Matteo Re and Giorgio Valentini}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Large Scale Ranking and Repositioning of Drugs with Respect to DrugBank Therapeutic Categories}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {225--236}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_21}, doi = {10.1007/978-3-642-30191-9\_21}, timestamp = {Sun, 02 Jun 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ReV12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SenguptaMB12, author = {Debarka Sengupta and Ujjwal Maulik and Sanghamitra Bandyopadhyay}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Score Based Aggregation of microRNA Target Orderings}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {237--248}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_22}, doi = {10.1007/978-3-642-30191-9\_22}, timestamp = {Sun, 02 Jun 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SenguptaMB12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Singh12, author = {Ambuj K. Singh}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Modeling Complex Diseases Using Discriminative Network Fragments - (Invited Keynote Talk)}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {249}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_23}, doi = {10.1007/978-3-642-30191-9\_23}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Singh12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SubramanianSS12, author = {Ayshwarya Subramanian and Stanley Shackney and Russell Schwartz}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Novel Multi-sample Scheme for Inferring Phylogenetic Markers from Whole Genome Tumor Profiles}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {250--262}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_24}, doi = {10.1007/978-3-642-30191-9\_24}, timestamp = {Sun, 02 Jun 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SubramanianSS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WeheBE12, author = {Andr{\'{e}} Wehe and J. Gordon Burleigh and Oliver Eulenstein}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Algorithms for Knowledge-Enhanced Supertrees}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {263--274}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_25}, doi = {10.1007/978-3-642-30191-9\_25}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WeheBE12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WienbrandtSS12, author = {Lars Wienbrandt and Daniel Siebert and Manfred Schimmler}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Improvement of BLASTp on the FPGA-Based High-Performance Computer {RIVYERA}}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {275--286}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_26}, doi = {10.1007/978-3-642-30191-9\_26}, timestamp = {Fri, 02 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/WienbrandtSS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WylieZ12, author = {Tim Wylie and Binhai Zhu}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {A Polynomial Time Solution for Protein Chain Pair Simplification under the Discrete Fr{\'{e}}chet Distance}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {287--298}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_27}, doi = {10.1007/978-3-642-30191-9\_27}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WylieZ12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YeasminS12, author = {Rukhsana Yeasmin and Steven Skiena}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Designing {RNA} Secondary Structures in Coding Regions}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {299--314}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_28}, doi = {10.1007/978-3-642-30191-9\_28}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YeasminS12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YuLYZCHW12, author = {Junjie Yu and Henry Chi{-}Ming Leung and Siu{-}Ming Yiu and Yong Zhang and Francis Y. L. Chin and Nathan Hobbs and Amy Y. X. Wang}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Phylogenetic Tree Reconstruction with Protein Linkage}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {315--327}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_29}, doi = {10.1007/978-3-642-30191-9\_29}, timestamp = {Thu, 22 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YuLYZCHW12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Zhang12, author = {Michael Q. Zhang}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Computational Modeling of Mammalian Promoters - (Invited Keynote Talk)}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {330}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_31}, doi = {10.1007/978-3-642-30191-9\_31}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Zhang12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangX12, author = {Jingfen Zhang and Dong Xu}, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Protein Structure Prediction and Clustering Using {MUFOLD}}, booktitle = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, pages = {328--329}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9\_30}, doi = {10.1007/978-3-642-30191-9\_30}, timestamp = {Thu, 23 Sep 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhangX12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2012, editor = {Leonidas G. Bleris and Ion I. Mandoiu and Russell Schwartz and Jianxin Wang}, title = {Bioinformatics Research and Applications - 8th International Symposium, {ISBRA} 2012, Dallas, TX, USA, May 21-23, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7292}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-30191-9}, doi = {10.1007/978-3-642-30191-9}, isbn = {978-3-642-30190-2}, timestamp = {Tue, 14 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2012.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BadrT11, author = {Ghada Badr and Marcel Turcotte}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Component-Based Matching for Multiple Interacting {RNA} Sequences}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {73--86}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_11}, doi = {10.1007/978-3-642-21260-4\_11}, timestamp = {Fri, 21 Aug 2020 17:12:20 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BadrT11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChangVKE11, author = {Wen{-}Chieh Chang and Sudheer Vakati and Roland Krause and Oliver Eulenstein}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Mining Biological Interaction Networks Using Weighted Quasi-Bicliques}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {428--439}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_40}, doi = {10.1007/978-3-642-21260-4\_40}, timestamp = {Sat, 24 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ChangVKE11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChaudharyBE11, author = {Ruchi Chaudhary and J. Gordon Burleigh and Oliver Eulenstein}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Algorithms for Rapid Error Correction for the Gene Duplication Problem}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {227--239}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_23}, doi = {10.1007/978-3-642-21260-4\_23}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChaudharyBE11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChaudharyBF11, author = {Ruchi Chaudhary and J. Gordon Burleigh and David Fern{\'{a}}ndez{-}Baca}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Fast Local Search for Unrooted Robinson-Foulds Supertrees}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {184--196}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_20}, doi = {10.1007/978-3-642-21260-4\_20}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChaudharyBF11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/EblenPRL11, author = {John D. Eblen and Charles A. Phillips and Gary L. Rogers and Michael A. Langston}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {The Maximum Clique Enumeration Problem: Algorithms, Applications and Implementations}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {306--319}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_30}, doi = {10.1007/978-3-642-21260-4\_30}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/EblenPRL11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/FuPYG11, author = {Yan Fu and Rong Pan and Qiang Yang and Wen Gao}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Query-Adaptive Ranking with Support Vector Machines for Protein Homology Prediction}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {320--331}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_31}, doi = {10.1007/978-3-642-21260-4\_31}, timestamp = {Sun, 02 Jun 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/FuPYG11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/FuZ11, author = {Bin Fu and Louxin Zhang}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {A Polynomial Algebra Method for Computing Exemplar Breakpoint Distance}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {297--305}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_29}, doi = {10.1007/978-3-642-21260-4\_29}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/FuZ11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GoreckiE11, author = {Pawel G{\'{o}}recki and Oliver Eulenstein}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {A Linear Time Algorithm for Error-Corrected Reconciliation of Unrooted Gene Trees}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {148--159}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_17}, doi = {10.1007/978-3-642-21260-4\_17}, timestamp = {Fri, 17 Jul 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GoreckiE11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GuoW11, author = {Fei Guo and Lusheng Wang}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Computing the Protein Binding Sites}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {25--36}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_7}, doi = {10.1007/978-3-642-21260-4\_7}, timestamp = {Tue, 12 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GuoW11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HasegawaYNIM11, author = {Takanori Hasegawa and Rui Yamaguchi and Masao Nagasaki and Seiya Imoto and Satoru Miyano}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Comprehensive Pharmacogenomic Pathway Screening by Data Assimilation}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {160--171}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_18}, doi = {10.1007/978-3-642-21260-4\_18}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HasegawaYNIM11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HodgkinsonK11, author = {Luqman Hodgkinson and Richard M. Karp}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Algorithms to Detect Multiprotein Modularity Conserved during Evolution}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {111--122}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_14}, doi = {10.1007/978-3-642-21260-4\_14}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HodgkinsonK11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HokszaS11, author = {David Hoksza and Daniel Svozil}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {{SETTER} - {RNA} SEcondary sTructure-based TERtiary Structure Similarity Algorithm}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {37--48}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_8}, doi = {10.1007/978-3-642-21260-4\_8}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HokszaS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HuBJ11, author = {Pingzhao Hu and Shelley B. Bull and Hui Jiang}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Gene Network Modules-Based Liner Discriminant Analysis of Microarray Gene Expression Data}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {286--296}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_28}, doi = {10.1007/978-3-642-21260-4\_28}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HuBJ11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/JancuraMPM11, author = {Pavol Jancura and Eleftheria Mavridou and Beatriz Pontes and Elena Marchiori}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Describing the Orthology Signal in a {PPI} Network at a Functional, Complex Level}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {209--226}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_22}, doi = {10.1007/978-3-642-21260-4\_22}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/JancuraMPM11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/JayEZBPSVCL11, author = {Jeremy J. Jay and John D. Eblen and Yun Zhang and Mikael Benson and Andy D. Perkins and Arnold M. Saxton and Brynn H. Voy and Elissa J. Chesler and Michael A. Langston}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {A Systematic Comparison of Genome Scale Clustering Algorithms - (Extended Abstract)}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {416--427}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_39}, doi = {10.1007/978-3-642-21260-4\_39}, timestamp = {Mon, 08 Apr 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/JayEZBPSVCL11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Jiang11, author = {Jonathan Q. Jiang}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Multi-label Correlated Semi-supervised Learning for Protein Function Prediction}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {368--379}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_35}, doi = {10.1007/978-3-642-21260-4\_35}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Jiang11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/KlemaHZT11, author = {Jir{\'{\i}} Kl{\'{e}}ma and Matej Holec and Filip Zelezn{\'{y}} and Jakub Tolar}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Comparative Evaluation of Set-Level Techniques in Microarray Classification}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {274--285}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_27}, doi = {10.1007/978-3-642-21260-4\_27}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/KlemaHZT11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LessaNGBW11, author = {Felipe Lessa and Daniele Martins Neto and K{\'{a}}tia Guimar{\~{a}}es and Marcelo M. Brigido and Maria Em{\'{\i}}lia Telles Walter}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Regene: Automatic Construction of a Multiple Component Dirichlet Mixture Priors Covariance Model to Identify Non-coding {RNA}}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {380--391}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_36}, doi = {10.1007/978-3-642-21260-4\_36}, timestamp = {Tue, 02 Mar 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LessaNGBW11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiHYZ11, author = {Chaojun Li and Jieyue He and Baoliu Ye and Wei Zhong}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {A Novel Core-Attachment Based Greedy Search Method for Mining Functional Modules in Protein Interaction Networks}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {332--343}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_32}, doi = {10.1007/978-3-642-21260-4\_32}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiHYZ11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiSLRBS11, author = {Hui Li and Lauren Scott and Chunmei Liu and Mugizi Robert Rwebangira and Legand Burge and William M. Southerland}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Rapid and Accurate Generation of Peptide Sequence Tags with a Graph Search Approach}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {253--261}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_25}, doi = {10.1007/978-3-642-21260-4\_25}, timestamp = {Thu, 31 Oct 2019 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiSLRBS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LinBE11, author = {Harris T. Lin and J. Gordon Burleigh and Oliver Eulenstein}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {The Deep Coalescence Consensus Tree Problem is Pareto on Clusters}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {172--183}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_19}, doi = {10.1007/978-3-642-21260-4\_19}, timestamp = {Thu, 15 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LinBE11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LinRM11, author = {Yu Lin and Vaibhav Rajan and Bernard M. E. Moret}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {A Metric for Phylogenetic Trees Based on Matching}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {197--208}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_21}, doi = {10.1007/978-3-642-21260-4\_21}, timestamp = {Tue, 31 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LinRM11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuCHT11, author = {Yu{-}Cheng Liu and Po{-}I Chiu and Hsuan{-}Cheng Huang and Vincent S. Tseng}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Prediction of Essential Genes by Mining Gene Ontology Semantics}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {49--60}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_9}, doi = {10.1007/978-3-642-21260-4\_9}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiuCHT11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ManuchPG11, author = {J{\'{a}}n Manuch and Murray Patterson and Arvind Gupta}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Towards a Characterisation of the Generalised Cladistic Character Compatibility Problem for Non-branching Character Trees}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {440--451}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_41}, doi = {10.1007/978-3-642-21260-4\_41}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ManuchPG11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Moret11, author = {Bernard M. E. Moret}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Phylogenetic Analysis of Whole Genomes - (Keynote Talk)}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {4--7}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_3}, doi = {10.1007/978-3-642-21260-4\_3}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Moret11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MozhayskiyT11, author = {Vadim Mozhayskiy and Ilias Tagkopoulos}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {\emph{In Silico} Evolution of Multi-scale Microbial Systems in the Presence of Mobile Genetic Elements and Horizontal Gene Transfer}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {262--273}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_26}, doi = {10.1007/978-3-642-21260-4\_26}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MozhayskiyT11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/NicolaeM11, author = {Marius Nicolae and Ion I. Mandoiu}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Accurate Estimation of Gene Expression Levels from {DGE} Sequencing Data}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {392--403}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_37}, doi = {10.1007/978-3-642-21260-4\_37}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/NicolaeM11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/RenWLWL11, author = {Jun Ren and Jianxin Wang and Min Li and Huan Wang and Binbin Liu}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Prediction of Essential Proteins by Integration of {PPI} Network Topology and Protein Complexes Information}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {12--24}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_6}, doi = {10.1007/978-3-642-21260-4\_6}, timestamp = {Fri, 21 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/RenWLWL11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Sankoff11, author = {David Sankoff}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {OMG! Orthologs for Multiple Genomes - Competing Formulations - (Keynote Talk)}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {2--3}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_2}, doi = {10.1007/978-3-642-21260-4\_2}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Sankoff11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Schwartz11, author = {Russell Schwartz}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Phylogenetics of Heterogeneous Samples - (Keynote Talk)}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {1}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_1}, doi = {10.1007/978-3-642-21260-4\_1}, timestamp = {Tue, 26 Jun 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Schwartz11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SwensonCPS11, author = {Krister M. Swenson and Eric C. H. Chen and Nicholas D. Pattengale and David Sankoff}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {The Kernel of Maximum Agreement Subtrees}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {123--135}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_15}, doi = {10.1007/978-3-642-21260-4\_15}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SwensonCPS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SzaboovaKEZT11, author = {Andrea Szab{\'{o}}ov{\'{a}} and Ondrej Kuzelka and Sergio Morales E. and Filip Zelezn{\'{y}} and Jakub Tolar}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Prediction of DNA-Binding Propensity of Proteins by the Ball-Histogram Method}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {358--367}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_34}, doi = {10.1007/978-3-642-21260-4\_34}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SzaboovaKEZT11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/TangK11, author = {Yi{-}Tsung Tang and Hung{-}Yu Kao}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {TransDomain: {A} Transitive Domain-Based Method in Protein-Protein Interaction Prediction}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {240--252}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_24}, doi = {10.1007/978-3-642-21260-4\_24}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/TangK11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WanZCL11, author = {Xiaohua Wan and Fa Zhang and Qi Chu and Zhiyong Liu}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {High-Performance Blob-Based Iterative Reconstruction of Electron Tomography on Multi-GPUs}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {61--72}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_10}, doi = {10.1007/978-3-642-21260-4\_10}, timestamp = {Thu, 19 Nov 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/WanZCL11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangFBLC11, author = {Han Wang and John Fazekas and Matthew Booth and Qi Liu and Dongsheng Che}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {An Integrative Approach for Genomic Island Prediction in Prokaryotic Genomes}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {404--415}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_38}, doi = {10.1007/978-3-642-21260-4\_38}, timestamp = {Wed, 18 May 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangFBLC11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangLWP11, author = {Huan Wang and Min Li and Jianxin Wang and Yi Pan}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {A New Method for Identifying Essential Proteins Based on Edge Clustering Coefficient}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {87--98}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_12}, doi = {10.1007/978-3-642-21260-4\_12}, timestamp = {Fri, 21 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangLWP11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Wei11, author = {Liping Wei}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Genetic and Pharmacogenetic Studies of Neuropsychiatric Disorders: Increasingly Critical Roles of Bioinformatics Research and Applications - (Keynote Talk)}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {8--10}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_4}, doi = {10.1007/978-3-642-21260-4\_4}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Wei11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Xing11, author = {Eric P. Xing}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Genome-Phenome Association Analysis of Complex Diseases a Structured Sparse Regression Approach - (Keynote Talk)}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {11}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_5}, doi = {10.1007/978-3-642-21260-4\_5}, timestamp = {Tue, 26 Jun 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Xing11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YangC11, author = {Jianyi Yang and Xin Chen}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {A Consensus Approach to Predicting Protein Contact Map via Logistic Regression}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {136--147}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_16}, doi = {10.1007/978-3-642-21260-4\_16}, timestamp = {Mon, 25 Dec 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/YangC11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangM11, author = {Xiuwei Zhang and Bernard M. E. Moret}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {ProPhyC: {A} Probabilistic Phylogenetic Model for Refining Regulatory Networks}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {344--357}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_33}, doi = {10.1007/978-3-642-21260-4\_33}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhangM11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhengS11, author = {Chunfang Zheng and David Sankoff}, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Gene Order in Rosid Phylogeny, Inferred from Pairwise Syntenies among Extant Genomes}, booktitle = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, pages = {99--110}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4\_13}, doi = {10.1007/978-3-642-21260-4\_13}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhengS11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2011, editor = {Jianer Chen and Jianxin Wang and Alexander Zelikovsky}, title = {Bioinformatics Research and Applications - 7th International Symposium, {ISBRA} 2011, Changsha, China, May 27-29, 2011. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6674}, publisher = {Springer}, year = {2011}, url = {https://doi.org/10.1007/978-3-642-21260-4}, doi = {10.1007/978-3-642-21260-4}, isbn = {978-3-642-21259-8}, timestamp = {Fri, 21 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2011.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Barbacioru10, author = {Catalin C. Barbacioru}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Tracing the Early Cell Divisions of Mouse Embryos by Single Cell RNA-Seq}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {1}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_1}, doi = {10.1007/978-3-642-13078-6\_1}, timestamp = {Tue, 14 May 2019 10:00:51 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Barbacioru10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Berman10, author = {Piotr Berman}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Successes and Failures of Elegant Algorithms in Computational Biology}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {2}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_2}, doi = {10.1007/978-3-642-13078-6\_2}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Berman10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BlinovRSM10, author = {Michael L. Blinov and Oliver Ruebenacker and James C. Schaff and Ion I. Moraru}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Modeling without Borders: Creating and Annotating VCell Models Using the Web}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {3--17}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_3}, doi = {10.1007/978-3-642-13078-6\_3}, timestamp = {Fri, 27 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/BlinovRSM10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DanielsKCM10, author = {Noah M. Daniels and Anoop Kumar and Lenore Cowen and Matthew Menke}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Touring Protein Space with Matt}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {18--28}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_4}, doi = {10.1007/978-3-642-13078-6\_4}, timestamp = {Thu, 15 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DanielsKCM10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DoanE10, author = {Duong Dai Doan and Patricia A. Evans}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Fixed-Parameter Algorithm for General Pedigrees with a Single Pair of Sites}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {29--37}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_5}, doi = {10.1007/978-3-642-13078-6\_5}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DoanE10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/EhlerRZBBCB10, author = {Martin Ehler and Vinodh N. Rajapakse and Barry Zeeberg and Brian P. Brooks and Jacob D. Brown and Wojciech Czaja and Robert F. Bonner}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Analysis of Temporal-spatial Co-variation within Gene Expression Microarray Data in an Organogenesis Model}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {38--49}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_6}, doi = {10.1007/978-3-642-13078-6\_6}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/EhlerRZBBCB10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/FerraroPPR10, author = {Nicola Ferraro and Luigi Palopoli and Simona Panni and Simona E. Rombo}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {"Master-Slave" Biological Network Alignment}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {215--229}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_24}, doi = {10.1007/978-3-642-13078-6\_24}, timestamp = {Mon, 18 Jul 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/FerraroPPR10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Gerstein10, author = {Mark B. Gerstein}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Human Genome Annotation}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {50--51}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_7}, doi = {10.1007/978-3-642-13078-6\_7}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Gerstein10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GyselG10, author = {Rob Gysel and Dan Gusfield}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Extensions and Improvements to the Chordal Graph Approach to the Multi-state Perfect Phylogeny Problem}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {52--60}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_8}, doi = {10.1007/978-3-642-13078-6\_8}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GyselG10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HigaLH10, author = {Carlos H. A. Higa and Vitor H. P. Louzada and Ronaldo Fumio Hashimoto}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Analysis of Gene Interactions Using Restricted Boolean Networks and Time-Series Data}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {61--76}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_9}, doi = {10.1007/978-3-642-13078-6\_9}, timestamp = {Fri, 27 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/HigaLH10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/KimS10, author = {Jay W. Kim and Rahul Singh}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Residue Contexts: Non-sequential Protein Structure Alignment Using Structural and Biochemical Features}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {77--88}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_10}, doi = {10.1007/978-3-642-13078-6\_10}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/KimS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiWWP10, author = {Min Li and Jianxin Wang and Huan Wang and Yi Pan}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Essential Proteins Discovery from Weighted Protein Interaction Networks}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {89--100}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_11}, doi = {10.1007/978-3-642-13078-6\_11}, timestamp = {Fri, 21 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiWWP10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiZELM10, author = {Juntao Li and Lei Zhu and Majid Eshaghi and Jianhua Liu and Karuturi R. Krishna Murthy}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Deciphering Transcription Factor Binding Patterns from Genome-Wide High Density ChIP-chip Tiling Array Data}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {230--240}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_25}, doi = {10.1007/978-3-642-13078-6\_25}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiZELM10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiuP10, author = {Bo Liu and Mihai Pop}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Identifying Differentially Abundant Metabolic Pathways in Metagenomic Datasets}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {101--112}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_12}, doi = {10.1007/978-3-642-13078-6\_12}, timestamp = {Wed, 17 Jul 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiuP10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MatthewsSW10, author = {Suzanne J. Matthews and Seung{-}Jin Sul and Tiffani L. Williams}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {A Novel Approach for Compressing Phylogenetic Trees}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {113--124}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_13}, doi = {10.1007/978-3-642-13078-6\_13}, timestamp = {Thu, 12 Sep 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MatthewsSW10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Ovcharenko10, author = {Ivan Ovcharenko}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Structure of Proximal and Distant Regulatory Elements in the Human Genome}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {125}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_14}, doi = {10.1007/978-3-642-13078-6\_14}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Ovcharenko10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Parida10, author = {Laxmi Parida}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Combinatorics in Recombinational Population Genomics}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {126--127}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_15}, doi = {10.1007/978-3-642-13078-6\_15}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Parida10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/PattengaleSM10, author = {Nicholas D. Pattengale and Krister M. Swenson and Bernard M. E. Moret}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Uncovering Hidden Phylogenetic Consensus}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {128--139}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_16}, doi = {10.1007/978-3-642-13078-6\_16}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/PattengaleSM10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/RenWCLC10, author = {Jun Ren and Jianxin Wang and Jianer Chen and Min Li and Gang Chen}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {An Agglomerate Algorithm for Mining Overlapping and Hierarchical Functional Modules in Protein Interaction Networks}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {140--151}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_17}, doi = {10.1007/978-3-642-13078-6\_17}, timestamp = {Fri, 21 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/RenWCLC10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ShibberuHL10, author = {Yosi Shibberu and Allen Holder and Kyla Lutz}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Fast Protein Structure Alignment}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {152--165}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_18}, doi = {10.1007/978-3-642-13078-6\_18}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ShibberuHL10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Singh10, author = {Mona Singh}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Predicting and Analyzing Cellular Networks}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {166}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_19}, doi = {10.1007/978-3-642-13078-6\_19}, timestamp = {Tue, 30 Oct 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/Singh10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/TsaiBRS10, author = {Ming{-}Chi Tsai and Guy E. Blelloch and R. Ravi and Russell Schwartz}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {A Consensus Tree Approach for Reconstructing Human Evolutionary History and Detecting Population Substructure}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {167--178}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_20}, doi = {10.1007/978-3-642-13078-6\_20}, timestamp = {Sun, 02 Jun 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/TsaiBRS10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WiedenhoeftKE10, author = {John Wiedenhoeft and Roland Krause and Oliver Eulenstein}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Inferring Evolutionary Scenarios for Protein Domain Compositions}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {179--190}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_21}, doi = {10.1007/978-3-642-13078-6\_21}, timestamp = {Sat, 24 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/WiedenhoeftKE10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WongCLY10, author = {Thomas K. F. Wong and Brenda W. Y. Cheung and Tak Wah Lam and Siu{-}Ming Yiu}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Local Structural Alignment of {RNA} with Affine Gap Model}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {191--202}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_22}, doi = {10.1007/978-3-642-13078-6\_22}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/WongCLY10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WuW10, author = {Yufeng Wu and Jiayin Wang}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Fast Computation of the Exact Hybridization Number of Two Phylogenetic Trees}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {203--214}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_23}, doi = {10.1007/978-3-642-13078-6\_23}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WuW10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhangW10, author = {Liqing Zhang and Layne T. Watson}, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {The Expected Fitness Cost of a Mutation Fixation under the One-Dimensional Fisher Model}, booktitle = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, pages = {241--252}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6\_26}, doi = {10.1007/978-3-642-13078-6\_26}, timestamp = {Tue, 26 Mar 2019 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ZhangW10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2010, editor = {Mark Borodovsky and Johann Peter Gogarten and Teresa M. Przytycka and Sanguthevar Rajasekaran}, title = {Bioinformatics Research and Applications, 6th International Symposium, {ISBRA} 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {6053}, publisher = {Springer}, year = {2010}, url = {https://doi.org/10.1007/978-3-642-13078-6}, doi = {10.1007/978-3-642-13078-6}, isbn = {978-3-642-13077-9}, timestamp = {Tue, 14 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2010.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Abu-halawehH09, author = {Na'el Abu{-}Halaweh and Robert W. Harrison}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Prediction and Classification of Real and Pseudo MicroRNA Precursors via Data Fuzzification and Fuzzy Decision Trees}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {323--334}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_31}, doi = {10.1007/978-3-642-01551-9\_31}, timestamp = {Fri, 24 Mar 2023 16:31:04 +0100}, biburl = {https://dblp.org/rec/conf/isbra/Abu-halawehH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BanhalmiBK09, author = {Andr{\'{a}}s B{\'{a}}nhalmi and R{\'{o}}bert Busa{-}Fekete and Bal{\'{a}}zs K{\'{e}}gl}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {A One-Class Classification Approach for Protein Sequences and Structures}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {310--322}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_30}, doi = {10.1007/978-3-642-01551-9\_30}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BanhalmiBK09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BaoB09, author = {Lichen Bao and Sergey Bereg}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Counting Faces in Split Networks}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {112--123}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_12}, doi = {10.1007/978-3-642-01551-9\_12}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BaoB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BlinSV09, author = {Guillaume Blin and Florian Sikora and St{\'{e}}phane Vialette}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Querying Protein-Protein Interaction Networks}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {52--62}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_6}, doi = {10.1007/978-3-642-01551-9\_6}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BlinSV09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BonizzoniVDPR09, author = {Paola Bonizzoni and Gianluca Della Vedova and Riccardo Dondi and Yuri Pirola and Romeo Rizzi}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Pure Parsimony Xor Haplotyping}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {186--197}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_19}, doi = {10.1007/978-3-642-01551-9\_19}, timestamp = {Mon, 15 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BonizzoniVDPR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GelfandKKLMRRRV09, author = {Mikhail S. Gelfand and Alexei E. Kazakov and Yuri D. Korostelev and Olga N. Laikova and Andrey A. Mironov and Aleksandra B. Rakhmaninova and Dmitry A. Ravcheev and Dmitry A. Rodionov and Alexei G. Vitreschak}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Evolution of Regulatory Systems in Bacteria (Invited Keynote Talk)}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {1--4}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_1}, doi = {10.1007/978-3-642-01551-9\_1}, timestamp = {Sat, 19 Oct 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GelfandKKLMRRRV09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GremalschiAAZ09, author = {Stefan Gremalschi and Gulsah Altun and Irina Astrovskaya and Alexander Zelikovsky}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Mean Square Residue Biclustering with Missing Data and Row Inversions}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {28--39}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_4}, doi = {10.1007/978-3-642-01551-9\_4}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GremalschiAAZ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HayesL09, author = {Matthew Hayes and Jing Li}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {A Linear-Time Algorithm for Analyzing Array {CGH} Data Using Log Ratio Triangulation}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {248--259}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_25}, doi = {10.1007/978-3-642-01551-9\_25}, timestamp = {Fri, 02 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/HayesL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HolderL09, author = {Allen Holder and Thomas M. Langley}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {A Decomposition of the Pure Parsimony Haplotyping Problem}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {198--208}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_20}, doi = {10.1007/978-3-642-01551-9\_20}, timestamp = {Mon, 05 Aug 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HolderL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HolecZKT09, author = {Matej Holec and Filip Zelezn{\'{y}} and Jir{\'{\i}} Kl{\'{e}}ma and Jakub Tolar}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Integrating Multiple-Platform Expression Data through Gene Set Features}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {5--17}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_2}, doi = {10.1007/978-3-642-01551-9\_2}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HolecZKT09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HowardSH09, author = {Brian E. Howard and Beate Sick and Steffen Heber}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Practical Quality Assessment of Microarray Data by Simulation of Differential Gene Expression}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {18--27}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_3}, doi = {10.1007/978-3-642-01551-9\_3}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HowardSH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Jimenez-MontanoH09, author = {Miguel A. Jim{\'{e}}nez{-}Monta{\~{n}}o and Matthew He}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Irreplaceable Amino Acids and Reduced Alphabets in Short-Term and Directed Protein Evolution}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {297--309}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_29}, doi = {10.1007/978-3-642-01551-9\_29}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Jimenez-MontanoH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/KimZHH09, author = {Jihye Kim and Sihui Zhao and Brian E. Howard and Steffen Heber}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Mining of cis-Regulatory Motifs Associated with Tissue-Specific Alternative Splicing}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {260--271}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_26}, doi = {10.1007/978-3-642-01551-9\_26}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/KimZHH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Kister09, author = {Alexander Kister}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Relationship between Amino Acids Sequences and Protein Structures: Folding Patterns and Sequence Patterns}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {124--134}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_13}, doi = {10.1007/978-3-642-01551-9\_13}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Kister09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/KundetiR09, author = {Vamsi Kundeti and Sanguthevar Rajasekaran}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Efficient Algorithms for Self Assembling Triangular and Other Nano Structures}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {148--158}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_15}, doi = {10.1007/978-3-642-01551-9\_15}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/KundetiR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LarsenD09, author = {Peter E. Larsen and Yang Dai}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Using Gene Expression Modeling to Determine Biological Relevance of Putative Regulatory Networks}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {40--51}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_5}, doi = {10.1007/978-3-642-01551-9\_5}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LarsenD09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiWCP09, author = {Min Li and Jianxin Wang and Jianer Chen and Yi Pan}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Hierarchical Organization of Functional Modules in Weighted Protein Interaction Networks Using Clustering Coefficient}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {75--86}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_8}, doi = {10.1007/978-3-642-01551-9\_8}, timestamp = {Fri, 21 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiWCP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiYLELM09, author = {Juntao Li and Fajrian Yunus and Zhu Lei and Majid Eshaghi and Jianhua Liu and Karuturi R. Krishna Murthy}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Modeling and Visualizing Heterogeneity of Spatial Patterns of Protein-DNA Interaction from High-Density Chromatin Precipitation Mapping Data}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {236--247}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_24}, doi = {10.1007/978-3-642-01551-9\_24}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiYLELM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MunozS09, author = {Adriana Mu{\~{n}}oz and David Sankoff}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Rearrangement Phylogeny of Genomes in Contig Form}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {160--172}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_17}, doi = {10.1007/978-3-642-01551-9\_17}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MunozS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/OuangraouaBMTC09, author = {A{\"{\i}}da Ouangraoua and Fr{\'{e}}d{\'{e}}ric Boyer and Andrew W. McPherson and Eric Tannier and C{\'{e}}dric Chauve}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Prediction of Contiguous Regions in the Amniote Ancestral Genome}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {173--185}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_18}, doi = {10.1007/978-3-642-01551-9\_18}, timestamp = {Thu, 10 Oct 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/OuangraouaBMTC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/PasaniucKM09, author = {Bogdan Pasaniuc and Justin Kennedy and Ion I. Mandoiu}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Imputation-Based Local Ancestry Inference in Admixed Populations}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {221--233}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_22}, doi = {10.1007/978-3-642-01551-9\_22}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/PasaniucKM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/RajasekaranSA09, author = {Sanguthevar Rajasekaran and Sahar Al Seesi and Reda A. Ammar}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Improved Algorithms for Parsing ESLTAGs: {A} Grammatical Model Suitable for {RNA} Pseudoknots}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {135--147}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_14}, doi = {10.1007/978-3-642-01551-9\_14}, timestamp = {Sun, 12 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/RajasekaranSA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SulW09, author = {Seung{-}Jin Sul and Tiffani L. Williams}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {An Experimental Analysis of Consensus Tree Algorithms for Large-Scale Tree Collections}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {100--111}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_11}, doi = {10.1007/978-3-642-01551-9\_11}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SulW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SulimovaMMMK09, author = {Valentina Sulimova and Vadim Mottl and Boris G. Mirkin and Ilya B. Muchnik and Casimir A. Kulikowski}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {A Class of Evolution-Based Kernels for Protein Homology Analysis: {A} Generalization of the {PAM} Model}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {284--296}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_28}, doi = {10.1007/978-3-642-01551-9\_28}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SulimovaMMMK09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Sunyaev09, author = {Shamil R. Sunyaev}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Interpreting Population Sequencing Data}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {234--235}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_23}, doi = {10.1007/978-3-642-01551-9\_23}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Sunyaev09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Tsinoremas09, author = {Nicholas F. Tsinoremas}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Bioinformatics Challenges in Translational Research}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {87}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_9}, doi = {10.1007/978-3-642-01551-9\_9}, timestamp = {Tue, 26 Jun 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Tsinoremas09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Ukkonen09, author = {Esko Ukkonen}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Motif Construction from High-Throughput {SELEX} Data}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {159}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_16}, doi = {10.1007/978-3-642-01551-9\_16}, timestamp = {Tue, 26 Jun 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Ukkonen09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/VenkatachalamAJG09, author = {Balaji Venkatachalam and Jim Apple and Katherine St. John and Dan Gusfield}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Untangling Tanglegrams: Comparing Trees by Their Drawings}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {88--99}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_10}, doi = {10.1007/978-3-642-01551-9\_10}, timestamp = {Thu, 23 Sep 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/VenkatachalamAJG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/VisvanathanPBTL09, author = {Mahesh Visvanathan and Bernhard Pfeifer and Christian Baumgartner and Bernhard Tilg and Gerald H. Lushington}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Integrative Approach for Combining TNFa-NFkB Mathematical Model to a Protein Interaction Connectivity Map}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {63--74}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_7}, doi = {10.1007/978-3-642-01551-9\_7}, timestamp = {Sat, 19 Oct 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/VisvanathanPBTL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Wu09, author = {Yufeng Wu}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Exact Computation of Coalescent Likelihood under the Infinite Sites Model}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {209--220}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_21}, doi = {10.1007/978-3-642-01551-9\_21}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Wu09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhaoKH09, author = {Sihui Zhao and Jihye Kim and Steffen Heber}, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Analysis of Cis-Regulatory Motifs in Cassette Exons by Incorporating Exon Skipping Rates}, booktitle = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, pages = {272--283}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9\_27}, doi = {10.1007/978-3-642-01551-9\_27}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhaoKH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2009, editor = {Ion I. Mandoiu and Giri Narasimhan and Yanqing Zhang}, title = {Bioinformatics Research and Applications, 5th International Symposium, {ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {5542}, publisher = {Springer}, year = {2009}, url = {https://doi.org/10.1007/978-3-642-01551-9}, doi = {10.1007/978-3-642-01551-9}, isbn = {978-3-642-01550-2}, timestamp = {Fri, 24 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/2009.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AgrawalBH08, author = {Ankit Agrawal and Volker Brendel and Xiaoqiu Huang}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Pairwise Statistical Significance Versus Database Statistical Significance for Local Alignment of Protein Sequences}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {50--61}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_6}, doi = {10.1007/978-3-540-79450-9\_6}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AgrawalBH08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AgrawalGH08, author = {Ankit Agrawal and Arka P. Ghosh and Xiaoqiu Huang}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Estimating Pairwise Statistical Significance of Protein Local Alignments Using a Clustering-Classification Approach Based on Amino Acid Composition}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {62--73}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_7}, doi = {10.1007/978-3-540-79450-9\_7}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AgrawalGH08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Ahmad08, author = {Shandar Ahmad}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Human Blood-Brain Differential Gene-Expression Correlates with Dipeptide Frequency of Gene Products}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {504--508}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_47}, doi = {10.1007/978-3-540-79450-9\_47}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/Ahmad08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Allen08, author = {Andrew S. Allen}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Invited Keynote Talk: Haplotype Sharing for Genome-Wide Case-Control Association Studies}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {183}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_17}, doi = {10.1007/978-3-540-79450-9\_17}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Allen08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AlmasriLCD08, author = {Eyad Almasri and Peter E. Larsen and Guanrao Chen and Yang Dai}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Incorporating Literature Knowledge in Bayesian Network for Inferring Gene Networks with Gene Expression Data}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {184--195}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_18}, doi = {10.1007/978-3-540-79450-9\_18}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AlmasriLCD08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ArnoldFDG08, author = {Nikita Arnold and Tema Fridman and Robert M. Day and Andrey Gorin}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Invited Keynote Talk: Computing P-Values for Peptide Identifications in Mass Spectrometry}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {100--109}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_10}, doi = {10.1007/978-3-540-79450-9\_10}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ArnoldFDG08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BansalE08, author = {Mukul S. Bansal and Oliver Eulenstein}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {The Gene-Duplication Problem: Near-Linear Time Algorithms for {NNI} Based Local Searches}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {14--25}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_3}, doi = {10.1007/978-3-540-79450-9\_3}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BansalE08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Buetow08, author = {Kenneth H. Buetow}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Invited Keynote Talk: Quiet Revolution: Connectivity in the Cancer Research Community}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {280}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_26}, doi = {10.1007/978-3-540-79450-9\_26}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Buetow08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/CampoDK08, author = {David S. Campo and Zoya Dimitrova and Yuri Khudyakov}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Physicochemical Correlation between Amino Acid Sites in Short Sequences under Selective Pressure}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {146--158}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_14}, doi = {10.1007/978-3-540-79450-9\_14}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/CampoDK08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/CheLJLX08, author = {Dongsheng Che and Guojun Li and Shane T. Jensen and Jun S. Liu and Ying Xu}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {{PFP:} {A} Computational Framework for Phylogenetic Footprinting in Prokaryotic Genomes}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {110--121}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_11}, doi = {10.1007/978-3-540-79450-9\_11}, timestamp = {Tue, 07 Nov 2017 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/CheLJLX08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DeradoLNBNRV08, author = {Gordana Derado and Kichun Sky Lee and Orietta Nicolis and F. DuBois Bowman and Mary Newell and Fabrizio F. Rugger and Brani Vidakovic}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Wavelet-Based 3-D Multifractal Spectrum with Applications in Breast {MRI} Images}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {281--292}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_27}, doi = {10.1007/978-3-540-79450-9\_27}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DeradoLNBNRV08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/EavensonJNMKY08, author = {Matthew Eavenson and Maciej Janik and Shravya Nimmagadda and John A. Miller and Krys J. Kochut and William S. York}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {GlycoBrowser: {A} Tool for Contextual Visualization of Biological Data and Pathways Using Ontologies}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {305--316}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_29}, doi = {10.1007/978-3-540-79450-9\_29}, timestamp = {Thu, 11 Apr 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/EavensonJNMKY08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/FranciscoOF08, author = {Alexandre P. Francisco and Arlindo L. Oliveira and Ana T. Freitas}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Identification of Transcription Factor Binding Sites in Promoter Regions by Modularity Analysis of the Motif Co-occurrence Graph}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {220--231}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_21}, doi = {10.1007/978-3-540-79450-9\_21}, timestamp = {Sat, 24 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/FranciscoOF08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GengAC08, author = {Huimin Geng and Hesham H. Ali and Wing C. Chan}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {A Hidden Markov Model Approach for Prediction of Genomic Alterations from Gene Expression Profiling}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {414--425}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_38}, doi = {10.1007/978-3-540-79450-9\_38}, timestamp = {Fri, 11 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GengAC08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GongXCRWHC08, author = {Ting Gong and Jianhua Xuan and Li Chen and Rebecca B. Riggins and Yue Joseph Wang and Eric P. Hoffman and Robert Clarke}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Sparse Decomposition of Gene Expression Data to Infer Transcriptional Modules Guided by Motif Information}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {244--255}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_23}, doi = {10.1007/978-3-540-79450-9\_23}, timestamp = {Wed, 25 Sep 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GongXCRWHC08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GotoS08, author = {Matthew A. Goto and Eric J. Schwabe}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {A Dynamic Programming Algorithm for De Novo Peptide Sequencing with Variable Scoring}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {171--182}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_16}, doi = {10.1007/978-3-540-79450-9\_16}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GotoS08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GremalschiA08, author = {Stefan Gremalschi and Gulsah Altun}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Mean Squared Residue Based Biclustering Algorithms}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {232--243}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_22}, doi = {10.1007/978-3-540-79450-9\_22}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GremalschiA08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Hoksza08, author = {David Hoksza}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Improved Alignment of Protein Sequences Based on Common Parts}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {87--99}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_9}, doi = {10.1007/978-3-540-79450-9\_9}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/Hoksza08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/KantLS08, author = {Mariana Kant and Maurice LeBon and David Sankoff}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Hierarchical Clustering Using Constraints}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {2--13}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_2}, doi = {10.1007/978-3-540-79450-9\_2}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/KantLS08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LamprechtMS08, author = {Anna{-}Lena Lamprecht and Tiziana Margaria and Bernhard Steffen}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Seven Variations of an Alignment Workflow - An Illustration of Agile Process Design and Management in Bio-jETI}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {445--456}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_42}, doi = {10.1007/978-3-540-79450-9\_42}, timestamp = {Sun, 02 Jun 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LamprechtMS08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LaraDK08, author = {James Lara and Zoya Dimitrova and Yuri Khudyakov}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Invited Keynote Talk: Integrative Viral Molecular Epidemiology: Hepatitis {C} Virus Modeling}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {355--366}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_33}, doi = {10.1007/978-3-540-79450-9\_33}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LaraDK08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LarsenACD08, author = {Peter E. Larsen and Eyad Almasri and Guanrao Chen and Yang Dai}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Incorporating Knowledge of Topology Improves Reconstruction of Interaction Networks from Microarray Data}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {434--443}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_40}, doi = {10.1007/978-3-540-79450-9\_40}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LarsenACD08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Leaver-FaySK08, author = {Andrew Leaver{-}Fay and Jack Snoeyink and Brian Kuhlman}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {On-the-Fly Rotamer Pair Energy Evaluation in Protein Design}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {343--354}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_32}, doi = {10.1007/978-3-540-79450-9\_32}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/Leaver-FaySK08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiLK08, author = {Juntao Li and Jianhua Liu and Karuturi R. Krishna Murthy}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Stepped Linear Regression to Accurately Assess Statistical Significance in Batch Confounded Differential Expression Analysis}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {481--491}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_45}, doi = {10.1007/978-3-540-79450-9\_45}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiLK08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiRGSG08, author = {Kejie Li and Reazur Rahman and Aditi Gupta and Prasad Siddavatam and Michael Gribskov}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Pattern Matching in {RNA} Structures}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {317--330}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_30}, doi = {10.1007/978-3-540-79450-9\_30}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LiRGSG08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiWC08, author = {Min Li and Jianxin Wang and Jianer Chen}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {A Graph-Theoretic Method for Mining Overlapping Functional Modules in Protein Interaction Networks}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {208--219}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_20}, doi = {10.1007/978-3-540-79450-9\_20}, timestamp = {Fri, 21 Aug 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiWC08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LoTB08, author = {Shin{-}Lian Lo and Kwok{-}Leung Tsui and Benjamin Barwick}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Invited Keynote Talk: Data Mining and Statistical Methods for Analyzing Microarray Experiments}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {444}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_41}, doi = {10.1007/978-3-540-79450-9\_41}, timestamp = {Fri, 02 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LoTB08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MartinezHR08, author = {Alexandra Mart{\'{\i}}nez and Joachim Hammer and Sanjay Ranka}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {BioDQ: Data Quality Estimation and Management for Genomics Databases}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {469--480}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_44}, doi = {10.1007/978-3-540-79450-9\_44}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MartinezHR08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MassoHPV08, author = {Majid Masso and Kahkeshan Hijazi and Nida Parvez and Iosif I. Vaisman}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Computational Mutagenesis of E. coliLacRepressor: Insight into Structure-Function Relationships and Accurate Prediction of Mutant Activity}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {390--401}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_36}, doi = {10.1007/978-3-540-79450-9\_36}, timestamp = {Sun, 04 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MassoHPV08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/NicolaeCWKS08, author = {Dan L. Nicolae and Omar De la Cruz and William Wen and Baoguan Ke and Minsun Song}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Invited Keynote Talk: Set-Level Analyses for Genome-Wide Association Data}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {1}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_1}, doi = {10.1007/978-3-540-79450-9\_1}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/NicolaeCWKS08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/OrdogG08, author = {Rafael {\"{O}}rd{\"{o}}g and Vince Grolmusz}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Evaluating Genetic Algorithms in Protein-Ligand Docking}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {402--413}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_37}, doi = {10.1007/978-3-540-79450-9\_37}, timestamp = {Thu, 15 Jun 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/OrdogG08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ParkSS08, author = {Yongjin Park and Stanley Shackney and Russell Schwartz}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Network-Based Inference of Cancer Progression from Microarray Data}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {268--279}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_25}, doi = {10.1007/978-3-540-79450-9\_25}, timestamp = {Sun, 02 Jun 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ParkSS08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Politis08, author = {Dimitris N. Politis}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Bagging Multiple Comparisons from Microarray Data}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {492--503}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_46}, doi = {10.1007/978-3-540-79450-9\_46}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Politis08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/QiuL08, author = {Shibin Qiu and Terran Lane}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Multiple Kernel Support Vector Regression for siRNA Efficacy Prediction}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {367--378}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_34}, doi = {10.1007/978-3-540-79450-9\_34}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/QiuL08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/StottsLR08, author = {David Stotts and Keith L. Lee and Ivan Rusyn}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Supporting Computational Systems Science: Genomic Analysis Tool Federations Using Aspects and {AOP}}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {457--468}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_43}, doi = {10.1007/978-3-540-79450-9\_43}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/StottsLR08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/TanTJZCK08, author = {Qihua Tan and Mads Thomassen and Kirsten M. Jochumsen and Jing Hua Zhao and Kaare Christensen and Torben Arvid Kruse}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Evolutionary Algorithm for Feature Subset Selection in Predicting Tumor Outcomes Using Microarray Data}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {426--433}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_39}, doi = {10.1007/978-3-540-79450-9\_39}, timestamp = {Sat, 19 Oct 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/TanTJZCK08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/TreangenDRM08, author = {Todd J. Treangen and Aaron E. Darling and Mark A. Ragan and Xavier Messeguer}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Gapped Extension for Local Multiple Alignment of Interspersed {DNA} Repeats}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {74--86}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_8}, doi = {10.1007/978-3-540-79450-9\_8}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/TreangenDRM08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangXCZWCH08, author = {Chen Wang and Jianhua Xuan and Li Chen and Po Zhao and Yue Joseph Wang and Robert Clarke and Eric P. Hoffman}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Integrative Network Component Analysis for Regulatory Network Reconstruction}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {196--207}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_19}, doi = {10.1007/978-3-540-79450-9\_19}, timestamp = {Wed, 25 Sep 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangXCZWCH08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WeiCBBSS08, author = {Xintao Wei and Lenore Cowen and Carla E. Brodley and Arthur Brady and D. Sculley and Donna K. Slonim}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {A Distance-Based Method for Detecting Horizontal Gene Transfer in Whole Genomes}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {26--37}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_4}, doi = {10.1007/978-3-540-79450-9\_4}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WeiCBBSS08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WestbrooksACKBZ08, author = {Kelly Westbrooks and Irina Astrovskaya and David S. Campo and Yuri Khudyakov and Piotr Berman and Alexander Zelikovsky}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {{HCV} Quasispecies Assembly Using Network Flows}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {159--170}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_15}, doi = {10.1007/978-3-540-79450-9\_15}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/WestbrooksACKBZ08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZaslavskyT08, author = {Leonid Zaslavsky and Tatiana A. Tatusova}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Accelerating the Neighbor-Joining Algorithm Using the Adaptive Bucket Data Structure}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {122--133}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_12}, doi = {10.1007/978-3-540-79450-9\_12}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZaslavskyT08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZengC08, author = {Qingguo Zeng and Yunmei Chen}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Accurate Inverse Consistent Non-rigid Image Registration and Its Application on Automatic Re-contouring}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {293--304}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_28}, doi = {10.1007/978-3-540-79450-9\_28}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZengC08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZengLYY08, author = {Xue{-}Qiang Zeng and Guo{-}Zheng Li and Jack Y. Yang and Mary Qu Yang}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {A Novel Metric for Redundant Gene Elimination Based on Discriminative Contribution}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {256--267}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_24}, doi = {10.1007/978-3-540-79450-9\_24}, timestamp = {Fri, 13 Sep 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZengLYY08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Zheng08, author = {Wei{-}Mou Zheng}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {The Use of a Conformational Alphabet for Fast Alignment of Protein Structures}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {331--342}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_31}, doi = {10.1007/978-3-540-79450-9\_31}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Zheng08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhongCSHD08, author = {Wei Zhong and Rick Chow and Richard Stolz and Jieyue He and Marsha Dowell}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Hierarchical Clustering Support Vector Machines for Classifying Type-2 Diabetes Patients}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {379--389}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_35}, doi = {10.1007/978-3-540-79450-9\_35}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhongCSHD08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhouCPW08, author = {Tingting Zhou and Keith C. C. Chan and Yi Pan and Zhenghua Wang}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {An Approach for Determining Evolutionary Distance in Network-Based Phylogenetic Analysis}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {38--49}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_5}, doi = {10.1007/978-3-540-79450-9\_5}, timestamp = {Mon, 28 Aug 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhouCPW08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhuACS08, author = {Qian Zhu and Zaky Adam and Vicky Choi and David Sankoff}, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Generalized Gene Adjacencies, Graph Bandwidth and Clusters in Yeast Evolution}, booktitle = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, pages = {134--145}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9\_13}, doi = {10.1007/978-3-540-79450-9\_13}, timestamp = {Sat, 26 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ZhuACS08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2008, editor = {Ion I. Mandoiu and Raj Sunderraman and Alexander Zelikovsky}, title = {Bioinformatics Research and Applications, Fourth International Symposium, {ISBRA} 2008, Atlanta, GA, USA, May 6-9, 2008. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4983}, publisher = {Springer}, year = {2008}, url = {https://doi.org/10.1007/978-3-540-79450-9}, doi = {10.1007/978-3-540-79450-9}, isbn = {978-3-540-79449-3}, timestamp = {Tue, 14 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2008.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/AltunHGHP07, author = {Gulsah Altun and Hae{-}Jin Hu and Stefan Gremalschi and Robert W. Harrison and Yi Pan}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {A Feature Selection Algorithm Based on Graph Theory and Random Forests for Protein Secondary Structure Prediction}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {590--600}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_54}, doi = {10.1007/978-3-540-72031-7\_54}, timestamp = {Tue, 14 May 2019 10:00:51 +0200}, biburl = {https://dblp.org/rec/conf/isbra/AltunHGHP07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BallaR07, author = {Sudha Balla and Sanguthevar Rajasekaran}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Space and Time Efficient Algorithms to Discover Endogenous RNAi Patterns in Complete Genome Data}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {260--269}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_24}, doi = {10.1007/978-3-540-72031-7\_24}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BallaR07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BarbutiMM07, author = {Roberto Barbuti and Andrea Maggiolo{-}Schettini and Paolo Milazzo}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Extending the Calculus of Looping Sequences to Model Protein Interaction at the Domain Level}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {638--649}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_58}, doi = {10.1007/978-3-540-72031-7\_58}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BarbutiMM07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BerntMM07, author = {Matthias Bernt and Daniel Merkle and Martin Middendorf}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {A Fast and Exact Algorithm for the Perfect Reversal Median Problem}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {305--316}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_28}, doi = {10.1007/978-3-540-72031-7\_28}, timestamp = {Sun, 04 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BerntMM07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Bi07, author = {Chengpeng Bi}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Multiple Sequence Local Alignment Using Monte Carlo {EM} Algorithm}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {465--476}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_42}, doi = {10.1007/978-3-540-72031-7\_42}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Bi07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Borodovsky07, author = {Mark Borodovsky}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Invited Talk: Ab Initio Gene Finding Engines: What Is Under the Hood}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {577}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_52}, doi = {10.1007/978-3-540-72031-7\_52}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Borodovsky07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BragaSST07, author = {Mar{\'{\i}}lia D. V. Braga and Marie{-}France Sagot and C{\'{e}}line Scornavacca and Eric Tannier}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {The Solution Space of Sorting by Reversals}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {293--304}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_27}, doi = {10.1007/978-3-540-72031-7\_27}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BragaSST07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/BuendiaN07, author = {Patricia Buendia and Giri Narasimhan}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Searching for Recombinant Donors in a Phylogenetic Network of Serial Samples}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {109--120}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_10}, doi = {10.1007/978-3-540-72031-7\_10}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/BuendiaN07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Busa-FeketeKB07, author = {R{\'{o}}bert Busa{-}Fekete and Andr{\'{a}}s Kocsor and Csaba Bagyinka}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {A Multi-Stack Based Phylogenetic Tree Building Method}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {49--60}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_5}, doi = {10.1007/978-3-540-72031-7\_5}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Busa-FeketeKB07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Calin-JagemanXPVK07, author = {Robert J. Calin{-}Jageman and Chao Xie and Yi Pan and Art Vandenberg and Paul S. Katz}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {NEURONgrid: {A} Toolkit for Generating Parameter-Space Maps Using {NEURON} in a Grid Environment}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {182--191}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_17}, doi = {10.1007/978-3-540-72031-7\_17}, timestamp = {Fri, 25 Aug 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Calin-JagemanXPVK07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChangCHTLZWCP07, author = {Margaret Dah{-}Tsyr Chang and Hao{-}Teng Chang and Rong{-}Yuan Huang and Wen{-}Shyong Tzou and Chih{-}Hong Liu and Wei{-}Jun Zhung and Hsien{-}Wei Wang and Chun{-}Tien Chang and Tun{-}Wen Pai}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {A Database for Prediction of Unique Peptide Motifs as Linear Epitopes}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {430--440}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_39}, doi = {10.1007/978-3-540-72031-7\_39}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChangCHTLZWCP07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChangKP07, author = {Kung{-}Hua Chang and Yong Kyun Kwon and Douglas Stott Parker Jr.}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Finding Minimal Sets of Informative Genes in Microarray Data}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {227--236}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_21}, doi = {10.1007/978-3-540-72031-7\_21}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChangKP07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChenGHE07, author = {Li Chen and Dmitry B. Goldgof and Lawrence O. Hall and Steven Eschrich}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Noise-Based Feature Perturbation as a Selection Method for Microarray Data}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {237--247}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_22}, doi = {10.1007/978-3-540-72031-7\_22}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChenGHE07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChenZZH07, author = {Xiujuan Chen and Yichuan Zhao and Yan{-}Qing Zhang and Robert W. Harrison}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Combining {SVM} Classifiers Using Genetic Fuzzy Systems Based on {AUC} for Gene Expression Data Analysis}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {496--505}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_45}, doi = {10.1007/978-3-540-72031-7\_45}, timestamp = {Thu, 23 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/ChenZZH07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ChoiJKL07, author = {Mun{-}Ho Choi and In{-}Seon Jeong and Seung{-}Ho Kang and Hyeong{-}Seok Lim}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {An Efficient Algorithm for Finding Gene-Specific Probes for {DNA} Microarrays}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {453--464}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_41}, doi = {10.1007/978-3-540-72031-7\_41}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ChoiJKL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/CohanKL07, author = {Frederick Cohan and Danny Krizanc and Yun Lu}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Estimating Bacterial Diversity from Environmental {DNA:} {A} Maximum Likelihood Approach}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {133--144}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_12}, doi = {10.1007/978-3-540-72031-7\_12}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/CohanKL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/DeradoBPNV07, author = {Gordana Derado and F. DuBois Bowman and Rajan Patel and Mary Newell and Brani Vidakovic}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Wavelet Image Interpolation {(WII):} {A} Wavelet-Based Approach to Enhancement of Digital Mammography Images}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {203--214}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_19}, doi = {10.1007/978-3-540-72031-7\_19}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/DeradoBPNV07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/FayyazKMK07, author = {Mudassir Fayyaz and Asifullah Khan and Adnan Mujahid and Alex Kavokin}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Using Multi Level Nearest Neighbor Classifiers for G-Protein Coupled Receptor Sub-families Prediction}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {564--576}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_51}, doi = {10.1007/978-3-540-72031-7\_51}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/FayyazKMK07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/FeiLPL07, author = {Xubo Fei and Shiyong Lu and Horia F. Pop and Lily R. Liang}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {{GFBA:} {A} Biclustering Algorithm for Discovering Value-Coherent Biclusters}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {1--12}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_1}, doi = {10.1007/978-3-540-72031-7\_1}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/FeiLPL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/FuCPH07, author = {Xuezheng Fu and Bernard Chen and Yi Pan and Robert W. Harrison}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Statistical Estimate for the Size of the Protein Structural Vocabulary}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {530--538}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_48}, doi = {10.1007/978-3-540-72031-7\_48}, timestamp = {Wed, 14 Mar 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/FuCPH07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GuptaMSZ07, author = {Arvind Gupta and J{\'{a}}n Manuch and Ladislav Stacho and Xiaohong Zhao}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Algorithm for Haplotype Inferring Via Galled-Tree Networks with Simple Galls}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {121--132}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_11}, doi = {10.1007/978-3-540-72031-7\_11}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GuptaMSZ07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/GuptaYIYM07, author = {Pramod K. Gupta and Ryo Yoshida and Seiya Imoto and Rui Yamaguchi and Satoru Miyano}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Statistical Absolute Evaluation of Gene Ontology Terms with Gene Expression Data}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {146--157}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_14}, doi = {10.1007/978-3-540-72031-7\_14}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/GuptaYIYM07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/He07, author = {Dan He}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {A Novel Greedy Algorithm for the Minimum Common String Partition Problem}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {441--452}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_40}, doi = {10.1007/978-3-540-72031-7\_40}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/He07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/HeathP07, author = {Lenwood S. Heath and Amrita Pati}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Genomic Signatures from {DNA} Word Graphs}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {317--328}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_29}, doi = {10.1007/978-3-540-72031-7\_29}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/HeathP07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/JiangMG07, author = {Minghui Jiang and Martin Mayne and Joel Gillespie}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Delta: {A} Toolset for the Structural Analysis of Biological Sequences on a 3D Triangular Lattice}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {518--529}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_47}, doi = {10.1007/978-3-540-72031-7\_47}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/JiangMG07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/JinNST07, author = {Guohua Jin and Luay Nakhleh and Sagi Snir and Tamir Tuller}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {A New Linear-Time Heuristic Algorithm for Computing the Parsimony Score of Phylogenetic Networks: Theoretical Bounds and Empirical Performance}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {61--72}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_6}, doi = {10.1007/978-3-540-72031-7\_6}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/JinNST07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/KimKH07, author = {Hyunmin Kim and Katherina J. Kechris and Lawrence Hunter}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Mining Discriminative Distance Context of Transcription Factor Binding Sites on ChIP Enriched Regions}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {338--349}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_31}, doi = {10.1007/978-3-540-72031-7\_31}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/KimKH07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/KimP07, author = {Hyunsoo Kim and Haesun Park}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Cancer Class Discovery Using Non-negative Matrix Factorization Based on Alternating Non-negativity-Constrained Least Squares}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {477--487}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_43}, doi = {10.1007/978-3-540-72031-7\_43}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/KimP07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LawsonZ07, author = {Mark J. Lawson and Liqing Zhang}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {The Identification of Antisense Gene Pairs Through Available Software}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {372--381}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_34}, doi = {10.1007/978-3-540-72031-7\_34}, timestamp = {Tue, 26 Mar 2019 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LawsonZ07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LeeRM07, author = {George Lee and Carlos Rodriguez and Anant Madabhushi}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {An Empirical Comparison of Dimensionality Reduction Methods for Classifying Gene and Protein Expression Datasets}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {170--181}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_16}, doi = {10.1007/978-3-540-72031-7\_16}, timestamp = {Wed, 25 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LeeRM07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Li07, author = {Ming Li}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Invited Talk: Modern Homology Search}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {145}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_13}, doi = {10.1007/978-3-540-72031-7\_13}, timestamp = {Tue, 30 Nov 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/Li07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiLM07, author = {Juntao Li and Jianhua Liu and Karuturi R. Krishna Murthy}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Data-Driven Smoothness Enhanced Variance Ratio Test to Unearth Responsive Genes in 0-Time Normalized Time-Course Microarray Data}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {25--36}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_3}, doi = {10.1007/978-3-540-72031-7\_3}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiLM07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LiaoL07, author = {Chen Liao and Shutao Li}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {A Support Vector Machine Ensemble for Cancer Classification Using Gene Expression Data}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {488--495}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_44}, doi = {10.1007/978-3-540-72031-7\_44}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/LiaoL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/LinLWHM07, author = {Cui Lin and Shiyong Lu and Danqing Wu and Jing Hua and Otto Muzik}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Coclustering Based Parcellation of Human Brain Cortex Using Diffusion Tensor {MRI}}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {539--550}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_49}, doi = {10.1007/978-3-540-72031-7\_49}, timestamp = {Fri, 18 Nov 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/LinLWHM07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Loganantharaj07, author = {Raja Loganantharaj}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Extensions of Naive Bayes and Their Applications to Bioinformatics}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {282--292}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_26}, doi = {10.1007/978-3-540-72031-7\_26}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Loganantharaj07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/MazloomBMSD07, author = {Amin R. Mazloom and Kalyan Basu and Subhrangsu S. Mandal and Mehran Sorourian and Sajal K. Das}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {{DNA} Sites Buried in Nucleosome Become Accessible at Room Temperature: {A} Discrete-Event-Simulation Based Modeling Approach}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {601--614}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_55}, doi = {10.1007/978-3-540-72031-7\_55}, timestamp = {Tue, 10 Sep 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/MazloomBMSD07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ShaikY07, author = {Jahangheer S. Shaik and Mohammed Yeasin}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Ranking Function Based on Higher Order Statistics {(RF-HOS)} for Two-Sample Microarray Experiments}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {97--108}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_9}, doi = {10.1007/978-3-540-72031-7\_9}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ShaikY07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Smith07, author = {Scott F. Smith}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {A Fast Approximate Covariance-Model-Based Database Search Method for Non-coding {RNA}}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {270--281}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_25}, doi = {10.1007/978-3-540-72031-7\_25}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Smith07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SongD07, author = {Dandan Song and Zhidong Deng}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {A {BP-SCFG} Based Approach for {RNA} Secondary Structure Prediction with Consecutive Bases Dependency and Their Relative Positions Information}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {506--517}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_46}, doi = {10.1007/978-3-540-72031-7\_46}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SongD07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SparksBD07, author = {Michael E. Sparks and Volker Brendel and Karin S. Dorman}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Markov Model Variants for Appraisal of Coding Potential in Plant {DNA}}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {394--405}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_36}, doi = {10.1007/978-3-540-72031-7\_36}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SparksBD07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/SridharLBRS07, author = {Srinath Sridhar and Fumei Lam and Guy E. Blelloch and R. Ravi and Russell Schwartz}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Efficiently Finding the Most Parsimonious Phylogenetic Tree Via Linear Programming}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {37--48}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_4}, doi = {10.1007/978-3-540-72031-7\_4}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/SridharLBRS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/TanDAVKK07, author = {Qihua Tan and Jesper Dahlgaard and Basem M. Abdallah and Werner Vach and Moustapha Kassem and Torben Arvid Kruse}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {A Bootstrap Correspondence Analysis for Factorial Microarray Experiments with Replications}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {73--84}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_7}, doi = {10.1007/978-3-540-72031-7\_7}, timestamp = {Mon, 15 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/TanDAVKK07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/TeggeRSS07, author = {Allison N. Tegge and Sandra L. Rodriguez{-}Zas and Jonathan V. Sweedler and Bruce R. Southey}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Enhanced Prediction of Cleavage in Bovine Precursor Sequences}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {350--360}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_32}, doi = {10.1007/978-3-540-72031-7\_32}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/TeggeRSS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ThorvaldsenYF07, author = {Steinar Thorvaldsen and Elinor Ytterstad and Tor Fl{\aa}}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Inferring Weak Adaptations and Selection Biases in Proteins from Composition and Substitution Matrices}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {382--393}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_35}, doi = {10.1007/978-3-540-72031-7\_35}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ThorvaldsenYF07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/TrajkovskiL07, author = {Igor Trajkovski and Nada Lavrac}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Efficient Generation of Biologically Relevant Enriched Gene Sets}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {248--259}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_23}, doi = {10.1007/978-3-540-72031-7\_23}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/TrajkovskiL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/VarshavskyHL07, author = {Roy Varshavsky and David Horn and Michal Linial}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Clustering Algorithms Optimizer: {A} Framework for Large Datasets}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {85--96}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_8}, doi = {10.1007/978-3-540-72031-7\_8}, timestamp = {Sun, 25 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/VarshavskyHL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/VassuraMMLFC07, author = {Marco Vassura and Luciano Margara and Filippo Medri and Pietro di Lena and Piero Fariselli and Rita Casadio}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Reconstruction of 3D Structures from Protein Contact Maps}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {578--589}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_53}, doi = {10.1007/978-3-540-72031-7\_53}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/VassuraMMLFC07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WangSP07, author = {Yanchao Wang and Rajshekhar Sunderraman and Piyaphol Phoungphol}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {High Level Programming Environment System for Protein Structure Data}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {215--226}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_20}, doi = {10.1007/978-3-540-72031-7\_20}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WangSP07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Wu07, author = {Fang{-}Xiang Wu}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Significance Analysis of Time-Course Gene Expression Profiles}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {13--24}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_2}, doi = {10.1007/978-3-540-72031-7\_2}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Wu07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WuL07, author = {Shiquan Wu and Jing Li}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Comparative Analysis of Gene-Coexpression Networks Across Species}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {615--626}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_56}, doi = {10.1007/978-3-540-72031-7\_56}, timestamp = {Wed, 12 Apr 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/WuL07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/WuMOX07, author = {Hongwei Wu and Fenglou Mao and Victor Olman and Ying Xu}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {An Algorithm for Hierarchical Classification of Genes of Prokaryotic Genomes}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {551--563}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_50}, doi = {10.1007/978-3-540-72031-7\_50}, timestamp = {Sun, 05 Nov 2017 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/isbra/WuMOX07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/Yang07, author = {Zheng Rong Yang}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Predicting Palmitoylation Sites Using a Regularised Bio-basis Function Neural Network}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {406--417}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_37}, doi = {10.1007/978-3-540-72031-7\_37}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/Yang07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YangE07, author = {Mary Qu Yang and Laura Elnitski}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Invited Talk: {A} Computational Study of Bidirectional Promoters in the Human Genome}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {361--371}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_33}, doi = {10.1007/978-3-540-72031-7\_33}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YangE07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/YuHZG07, author = {Hao Yu and Minlie Huang and Xiaoyan Zhu and Yabin Guo}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {A Novel Kernel-Based Approach for Predicting Binding Peptides for {HLA} Class {II} Molecules}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {418--429}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_38}, doi = {10.1007/978-3-540-72031-7\_38}, timestamp = {Thu, 08 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/YuHZG07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZaslavskyBT07, author = {Leonid Zaslavsky and Yiming Bao and Tatiana A. Tatusova}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {An Adaptive Resolution Tree Visualization of Large Influenza Virus Sequence Datasets}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {192--202}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_18}, doi = {10.1007/978-3-540-72031-7\_18}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZaslavskyBT07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZengN07, author = {Erliang Zeng and Giri Narasimhan}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Enhancing Motif Refinement by Incorporating Comparative Genomics Data}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {329--337}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_30}, doi = {10.1007/978-3-540-72031-7\_30}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZengN07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZhaoCC07, author = {Jizhen Zhao and Dongsheng Che and Liming Cai}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Comparative Pathway Prediction Via Unified Graph Modeling of Genomic Structure Information}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {627--637}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_57}, doi = {10.1007/978-3-540-72031-7\_57}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZhaoCC07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/isbra/ZoppisMAMM07, author = {Italo Zoppis and Daniele Merico and Marco Antoniotti and Bud Mishra and Giancarlo Mauri}, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Discovering Relations Among GO-Annotated Clusters by Graph Kernel Methods}, booktitle = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, pages = {158--169}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7\_15}, doi = {10.1007/978-3-540-72031-7\_15}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/ZoppisMAMM07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/isbra/2007, editor = {Ion I. Mandoiu and Alexander Zelikovsky}, title = {Bioinformatics Research and Applications, Third International Symposium, {ISBRA} 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {4463}, publisher = {Springer}, year = {2007}, url = {https://doi.org/10.1007/978-3-540-72031-7}, doi = {10.1007/978-3-540-72031-7}, isbn = {978-3-540-72030-0}, timestamp = {Tue, 14 May 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/isbra/2007.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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