default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDSearch dblp for Publications
export results for "stream:conf/icbo:"
download as .bib file
@inproceedings{DBLP:conf/icbo/0001DHKDN23,
author = {Stefan Schulz and
Warren Del{-}Pinto and
Lifeng Han and
Markus Kreuzthaler and
Sareh Aghaei Dinani and
Goran Nenadic},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Towards Principles of Ontology-Based Annotation of Clinical Narratives},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {36--47},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Paper4.pdf},
timestamp = {Sat, 13 Jan 2024 01:49:11 +0100},
biburl = {https://dblp.org/rec/conf/icbo/0001DHKDN23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AcunaARM23,
author = {Cindy Acu{\~{n}}a and
Yasmine Anch{\'{e}}n and
Edelweis Rohrer and
Regina Motz},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {An Ontology for Mammography Screening Recommendation},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {48--59},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Paper5.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AcunaARM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AlmeidaE23,
author = {Maur{\'{\i}}cio B. Almeida and
Jeanne Louize Emygdio},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {{BFO} as a Top-Level Ontology for Information Systems Modeling},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {212},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Tutorial2.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AlmeidaE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AlperSDM23,
author = {Brian S. Alper and
Khalid Shahin and
Joanne Dehnbostel and
Cau{\^{e}} F. Monaco},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Ontology Development in {FHIR} Resources with the Fast Evidence Interoperability
Resources (FEvIR) Platform},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {214},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/SoftwareDemoAbstract1.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AlperSDM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BernabeJSR23,
author = {C{\'{e}}sar Henrique Bernab{\'{e}} and
Annika Jacobsen and
Luiz Olavo Bonino da Silva Santos and
Marco Roos},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {A Method to Facilitate the Identification of FAIRification Objectives},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {179},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Poster1.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BernabeJSR23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Cardoso23,
author = {Evellin Cardoso},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Integrating Declarative and Procedural Knowledge in Infectious Disease
Scenario for Epidemiological Monitoring},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {193--198},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/workshopOIIDDS2.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Cardoso23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CarvalhoSRBT23,
author = {Cilenir Carla de Carvalho and
Andreia Soprani dos Santos and
Silvia das Dores Rissino and
Susana Bubach and
Maria das Gra{\c{c}}as da Silva Teixeira},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {The OntoWoH Ontology - a Women's Health Reference Ontology Detailing
the Fragment of Climacteric and Menopause},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {106--117},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Paper10.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CarvalhoSRBT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ColleHB23,
author = {Giacomo De Colle and
Ali Hasanzadeh and
John Beverley},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Ontology Development Strategies and the Infectious Disease Ontology
Ecosystem},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {184--192},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/workshopOIIDDS1.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ColleHB23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/DevkotaMM23,
author = {Pratik Devkota and
Somya D. Mohanty and
Prashanti Manda},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Using Ontology Embeddings With Deep Learning Architectures to Improve
Prediction of Ontology Concepts From Literature},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {118--129},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Paper11.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/DevkotaMM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/DowlandGBB23,
author = {S. Clint Dowland and
Melody L. Greer and
Sudeepa Bhattacharyya and
Mathias Brochhausen},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Ontology-based Integration of Consumer Data and {EHR} Systems to Fill
Gaps in Social Determinants of Health Data},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {166--172},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/ShortPaper1.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/DowlandGBB23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FabryBE23,
author = {Paul Fabry and
Adrien Barton and
Jean{-}Fran{\c{c}}ois Ethier},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Version Control for Interdependent Ontologies: Challenges and First
Propositions},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {154--165},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Paper14.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FabryBE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Guizzardi23,
author = {Giancarlo Guizzardi},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Ontology-Driven Conceptual Modeling with UFO, gUFO, and OntoUML},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {213},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Tutorial3.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Guizzardi23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HuffmanOBS0MWH23,
author = {Anthony Huffman and
Edison Ong and
Timothy Brunson and
Nasim Sanati and
Jie Zheng and
Anna Maria Masci and
Guanming Wu and
Yongqun He},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Ontology-based Representation and Analysis of Conditional Vaccine
Immune Responses Using Omics Data},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {1--12},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Paper1.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HuffmanOBS0MWH23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Iseminger0CDGGS23,
author = {Madeline Iseminger and
Muhammad Zohaib Anwar and
Rhiannon Cameron and
Damion M. Dooley and
Paul Gordon and
Emma J. Griffiths and
Anoosha Sehar and
Khushi Vora and
William Hsiao},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Tracking the Functional Effects of SARS-CoV-2 Genomic Variants: an
Ontology-Driven Approach},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {182--183},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Poster4.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Iseminger0CDGGS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/KafkasTA23,
author = {Senay Kafkas and
Sumyyah Toonsi and
Sakhaa Alsaedi},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Natural Language Processing Tutorial for Biomedical Text Mining},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {211},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Tutorial1.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/KafkasTA23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/KindermannS23,
author = {Christian Kindermann and
Martin Georg Skj{\ae}veland},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Concrete Names for Complex Expressions in Ontologies: {A} Survey of
Biomedical Ontologies},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {82--93},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Paper8.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/KindermannS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/KochS23,
author = {Peter Koch and
Barry Smith},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Beyond the Goods-Service Continuum},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {173--178},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Shortpaper2.pdf},
timestamp = {Wed, 17 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/KochS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Lubiana23,
author = {Tiago Lubiana},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {The Interplay of Wikidata and the Cell Ontology},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {181},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Poster3.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Lubiana23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MkrtchianK23,
author = {Avetis Mkrtchian and
Petr Kremen},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {An Interactive Dashboard for Ontology Quality Monitoring},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {204--210},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/workshopFOHTI.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MkrtchianK23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MuhajabAH23,
author = {Areej Muhajab and
Alia I. Abdelmoty and
Athanasios Hassoulas},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Reuse and Enrichment for Building an Ontology for Obsessive-Compulsive
Disorder},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {142--153},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Paper13.pdf},
timestamp = {Mon, 16 Sep 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icbo/MuhajabAH23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/NikiemaMJ023,
author = {Jean No{\"{e}}l Nikiema and
Fleur Mougin and
Vianney Jouhet and
Stefan Schulz},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {KOSonto: an Ontology for Knowledge Organization Systems, Their Constituents,
and Their Referents},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {130--141},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Paper12.pdf},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/NikiemaMJ023.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/RabenbergPC23,
author = {Michael Rabenberg and
Anuwat Pengput and
Werner Ceusters},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {An Extendible Realism-Based Ontology for Kinship},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {25--35},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Paper3.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/RabenbergPC23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SahilK23,
author = {Sahil and
P. Sreenivasa Kumar},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Leveraging Biomedical Ontologies to Boost Performance of BERT-Based
Models for Answering Medical MCQs},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {94--105},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Paper9.pdf},
timestamp = {Wed, 17 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SahilK23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SouzaFFFA23,
author = {Amanda Damasceno de Souza and
Fernanda Farinelli and
Eduardo Ribeiro Felipe and
Armando S{\'{e}}rgio de Aguiar Filho and
Mauricio Barcellos Almeida},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {An Application of Natural Language Processing and Ontologies to Electronic
Healthcare Records in the Field of Gynecology},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {60--69},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Paper6.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SouzaFFFA23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SteliotesBL23,
author = {Emily Steliotes and
Daniela Barile and
Matthew Lange},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Multi-Ontology framework of Maternal Milk for Immune Systems {(MOMMIS)}},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {199--203},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/workshopOIIDDS3.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SteliotesBL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ToonsiKH23,
author = {Sumyyah Toonsi and
Senay Kafkas and
Robert Hoehndorf},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Exploring the Use of Ontology Components for Distantly-Supervised
Disease and Phenotype Named Entity Recognition},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {13--24},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Paper2.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ToonsiKH23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/VieiraJA23,
author = {Josina da Silva Vieira and
Let{\'{\i}}cia Santos de Jesus and
Tain{\'{a}} Batista de Assis},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Taxonomy Proposal for Controlled Vocabulary Planning in the Pinakes
Catalogue With Tematres},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {180},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Poster2.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/VieiraJA23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Wulff23,
author = {Enrique Wulff},
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {The Potential of Ontologies for the Empirical Assessment of Machine
Learning Techniques in Operational Oceanography},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
pages = {70--81},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603/Paper7.pdf},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Wulff23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icbo/2023,
editor = {Fernanda Farinelli and
Amanda Damasceno de Souza and
Eduardo Ribeiro Felipe},
title = {Proceedings of the International Conference on Biomedical Ontologies
2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated
Disease Data Science {(OIIDDS} 2023) and the {FAIR} Ontology Harmonization
and {TRUST} Data Interoperability Workshop {(FOHTI} 2023), Bras{\'{\i}}lia,
Brazil, August 28 - September 1, 2023},
series = {{CEUR} Workshop Proceedings},
volume = {3603},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3603},
urn = {urn:nbn:de:0074-3603-6},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/2023.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icbo/2021,
editor = {Janna Hastings and
Adrien Barton},
title = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
publisher = {CEUR-WS.org},
year = {2022},
url = {https://ceur-ws.org/Vol-3073},
urn = {urn:nbn:de:0074-3073-0},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/2021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AllyC21,
author = {Irshad Ally and
Werner Ceusters},
editor = {Janna Hastings and
Adrien Barton},
title = {Challenges in Realism-Based Ontology Design: {A} Case Study on Creating
an Ontology for Motivational Learning Theories},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {63--69},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper7.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:23 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AllyC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Barton21,
author = {Adrien Barton},
editor = {Janna Hastings and
Adrien Barton},
title = {Foundations for an Ontology of Nudges},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {174--183},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper27.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Barton21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BelloAS21,
author = {Susan M. Bello and
Anna V. Anagnostopoulos and
Cynthia L. Smith},
editor = {Janna Hastings and
Adrien Barton},
title = {Expanding the Mammalian Phenotype Ontology to Meet the Needs of {COVID-19}
Model Curation},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {137--140},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper21.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BelloAS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BucheCDIOW21,
author = {Patrice Buche and
Julien Cufi and
St{\'{e}}phane Dervaux and
Liliana Ibanescu and
Alrick Oudot and
Magalie Weber},
editor = {Janna Hastings and
Adrien Barton},
title = {Managing Incompleteness and Validating the Content of Nutritional
Food Sources using FoodOn as Pivot Ontology},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {128--130},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper18.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BucheCDIOW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ChanVTMDMH21,
author = {Lauren E. Chan and
Nicole A. Vasilevsky and
Anne E. Thessen and
Nicolas Matentzoglu and
William D. Duncan and
Christopher J. Mungall and
Melissa A. Haendel},
editor = {Janna Hastings and
Adrien Barton},
title = {A Semantic Model Leveraging Pattern-based Ontology Terms to Bridge
Environmental Exposures and Health Outcomes},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {48--55},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper5.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ChanVTMDMH21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ClarksonDPR21,
author = {Melissa D. Clarkson and
Landon T. Detwiler and
Kristen M. Platt and
Steven K. Roggenkamp},
editor = {Janna Hastings and
Adrien Barton},
title = {Assessing the Consistency of Modeling in Complex Ontologies: {A} Study
of the Musculoskeletal System of the Foundational Model of Anatomy},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {13--23},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper2.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ClarksonDPR21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CoxJWKBD21,
author = {Alexander P. Cox and
Kiernan L. Johnson and
Lauren Wishnie and
Aaron S. Kemp and
Jonathan P. Bona and
Alexander D. Diehl},
editor = {Janna Hastings and
Adrien Barton},
title = {Recent Refinements of the NeuroPsychological Testing Ontology},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {152--154},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper25.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CoxJWKBD21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/DuncanAABBBBCCC21,
author = {William D. Duncan and
Faiza Ahmed and
Fnu Anubhav and
Jeffrey Baumes and
Jonathan Beezley and
Mark Borkum and
Lisa M. Bramer and
Shane Canon and
Patrick S. G. Chain and
Danielle Christianson and
Yuri Corilo and
Karen Davenport and
Brandon Davis and
Meghan Drake and
Kjiersten Fagnan and
Mark Flynn and
David Hays and
Bin Hu and
Marcel Huntemann and
Julia Kelliher and
Sofya Lebedeva and
Po{-}E Li and
Mary Lipton and
Chien{-}Chi Lo and
Douglas Mans and
Stanton Martin and
Lee Ann McCue and
David Millard and
Kayd Miller and
Nigel Mouncey and
Paul D. Piehowski and
Elais Player Jackson and
Anastasiya Prymolenna and
Samuel O. Purvine and
T. B. K. Reddy and
Rachel Richardson and
Migun Shakya and
Montana Smith and
Jagadish Chandrabose Sundaramurthi and
Mark A. Miller and
Deepak R. Unni and
Pajau Vangay and
Bruce Wilson and
Donald Winston and
Elisha M. Wood{-}Charlson and
Yan Xu and
Emiley A. Eloe{-}Fadrosh and
Christopher J. Mungall},
editor = {Janna Hastings and
Adrien Barton},
title = {Leveraging Ontologies within the National Microbiome Data Collaborative},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {141--143},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper22.pdf},
timestamp = {Fri, 15 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/DuncanAABBBBCCC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FabryGBE21,
author = {Paul Fabry and
Fran{\c{c}}ois Goyer and
Adrien Barton and
Jean{-}Fran{\c{c}}ois Ethier},
editor = {Janna Hastings and
Adrien Barton},
title = {An Ontological Analysis of Health Procedure Information},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {36--47},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper4.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FabryGBE21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FoxR21,
author = {Mark Fox and
Kate Ruff},
editor = {Janna Hastings and
Adrien Barton},
title = {{CIDS:} An Ontology for Representing Social and Environmental Impact},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {162--173},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper26.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FoxR21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FuentesMVDLL21,
author = {Victor Fuentes and
Tomas Martin and
Petko Valtchev and
Abdoulaye Banir{\'{e}} Diallo and
Ren{\'{e}} Lacroix and
Maxime Leduc},
editor = {Janna Hastings and
Adrien Barton},
title = {Toward {A} Dairy Ontology to Support Precision Farming},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {24--35},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper3.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FuentesMVDLL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GhoshGBACD21,
author = {Mirna El Ghosh and
Fethi Ghazouani and
Benjamin Birene and
Elise Akan and
Jean Charlet and
Ferdinand Dhombres},
editor = {Janna Hastings and
Adrien Barton},
title = {Modeling Logical Definitions in Biomedical Ontologies by Reusing Ontology
Design Patterns},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {56--62},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper6.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GhoshGBACD21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HastingsWMNC21,
author = {Janna Hastings and
Robert West and
Susan Michie and
Caitlin Notley and
Sharon Cox},
editor = {Janna Hastings and
Adrien Barton},
title = {Ontologies for the Behavioural and Social Sciences: Opportunities
and Challenges},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {155--161},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/invited1.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HastingsWMNC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HuangPZH21,
author = {Guirui Huang and
Suyuan Peng and
Luxia Zhang and
Yongqun He},
editor = {Janna Hastings and
Adrien Barton},
title = {Identification and Ontology Term Enrichment Analysis of Genes Associated
with {COVID-19} and Acute Kidney Disease},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {110--115},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper15.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HuangPZH21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/JoachimiakHDRCT21,
author = {Marcin P. Joachimiak and
Harshad Hegde and
William D. Duncan and
Justin T. Reese and
Luca Cappelletti and
Anne E. Thessen and
Christopher J. Mungall},
editor = {Janna Hastings and
Adrien Barton},
title = {KG-Microbe: {A} Reference Knowledge-Graph and Platform for Harmonized
Microbial Information},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {131--133},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper19.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/JoachimiakHDRCT21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LinYDCKMBDDPRH21,
author = {Asiyah Yu Lin and
Yuki Yamagata and
William D. Duncan and
Leigh C. Carmody and
Tatsuya Kushida and
Hiroshi Masuya and
John Beverley and
Biswanath Dutta and
Michael DeBellis and
Zo{\"{e}} May Pendlington and
Paola Roncaglia and
Yongqun He},
editor = {Janna Hastings and
Adrien Barton},
title = {A Community Effort for {COVID-19} Ontology Harmonization},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {122--127},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper17.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LinYDCKMBDDPRH21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LiuJSJKH21,
author = {Yingtong Liu and
Wenjun Ju and
Becky Steck and
Sanjay Jain and
Matthias Kretzler and
Yongqun He},
editor = {Janna Hastings and
Adrien Barton},
title = {Ontology-based Modeling, Representation, and Analysis of Biomarkers
in Healthy and Disease Kidney Tissue},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {70--76},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper8.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LiuJSJKH21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LordW21,
author = {Phillip Lord and
Jennifer D. Warrender},
editor = {Janna Hastings and
Adrien Barton},
title = {Horned-OWL: Building Ontologies at Big Data Scale},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {134--136},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper20.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LordW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LymanNSACM21,
author = {Daniel Lyman and
Darren A. Natale and
Lynn M. Schriml and
Kriston Anton and
Daniel C. Crichton and
Raja Mazumder},
editor = {Janna Hastings and
Adrien Barton},
title = {Analysis of Biomarker Data Towards Development of a Molecular Biomarker
Ontology},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {99--103},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper13.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LymanNSACM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MerrellK21,
author = {Eric C. Merrell and
Robert M. Kelly},
editor = {Janna Hastings and
Adrien Barton},
title = {Improving Biomedical Data by Improving the Information Artifact Ontology},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {77--83},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper9.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MerrellK21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MillerJM21,
author = {Mark A. Miller and
Rebecca C. Jackson and
Christopher J. Mungall},
editor = {Janna Hastings and
Adrien Barton},
title = {Bringing Schemas to the Schemaless},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {144--147},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper23.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MillerJM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MoxonSUJBBVDHMB21,
author = {Sierra A. T. Moxon and
Harold Solbrig and
Deepak R. Unni and
Dazhi Jiao and
Richard M. Bruskiewich and
James P. Balhoff and
Gaurav Vaidya and
William D. Duncan and
Harshad Hegde and
Mark Miller and
Matthew H. Brush and
Nomi L. Harris and
Melissa A. Haendel and
Christopher J. Mungall},
editor = {Janna Hastings and
Adrien Barton},
title = {The Linked Data Modeling Language (LinkML): {A} General-Purpose Data
Modeling Framework Grounded in Machine-Readable Semantics},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {148--151},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper24.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MoxonSUJBBVDHMB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Queralt-Rosinach21,
author = {N{\'{u}}ria Queralt{-}Rosinach and
C{\'{e}}sar Henrique Bernab{\'{e}} and
Qinqin Long and
Rajaram Kaliyaperumal and
Marco Roos},
editor = {Janna Hastings and
Adrien Barton},
title = {{LUMC} Clinical Ontology for Biomedical Research},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {84--88},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper10.pdf},
timestamp = {Tue, 20 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icbo/Queralt-Rosinach21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ShahDPZH21,
author = {Easheta Shah and
Roshan Desai and
Suyuan Peng and
Luxia Zhang and
Yongqun He},
editor = {Janna Hastings and
Adrien Barton},
title = {Ontology Modeling and Analysis of COVID-19-associated Acute Kidney
Injury and Its Underlying Molecular Mechanisms},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {116--121},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper16.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ShahDPZH21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Spatafora21,
author = {Maria Ausilia Napoli Spatafora},
editor = {Janna Hastings and
Adrien Barton},
title = {{HAO:} Hearing Aid Ontology},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {94--98},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper12.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Spatafora21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ToyoshimaBFE21,
author = {Fumiaki Toyoshima and
Adrien Barton and
Paul Fabry and
Jean{-}Fran{\c{c}}ois Ethier},
editor = {Janna Hastings and
Adrien Barton},
title = {Representing Gender in Ontologies: {A} Dispositional Perspective},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {1--12},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper1.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ToyoshimaBFE21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/VasilevskyTMJHR21,
author = {Nicole A. Vasilevsky and
Sabrina Toro and
Nicolas Matentzoglu and
Dazhi Jiao and
Melissa A. Haendel and
Peter N. Robinson and
Christopher J. Mungall},
editor = {Janna Hastings and
Adrien Barton},
title = {Reclassification of Infectious Disease in the Mondo Disease Ontology},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {104--109},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper14.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/VasilevskyTMJHR21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ZhangE21,
author = {Wenjin Zhang and
Nathan J. Edwards},
editor = {Janna Hastings and
Adrien Barton},
title = {GNOme - Glycan Naming and Subsumption Ontology},
booktitle = {Proceedings of the International Conference on Biomedical Ontologies
2021 co-located with the Workshop on Ontologies for the Behavioural
and Social Sciences (OntoBess 2021) as part of the Bolzano Summer
of Knowledge {(BOSK} 2021), Bozen-Bolzano, Italy, 16-18 September,
2021},
series = {{CEUR} Workshop Proceedings},
volume = {3073},
pages = {89--93},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-3073/paper11.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ZhangE21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icbo/2019,
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-2931},
urn = {urn:nbn:de:0074-2931-2},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/2019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icbo/2020,
editor = {Janna Hastings and
Frank Loebe},
title = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
publisher = {CEUR-WS.org},
year = {2021},
url = {https://ceur-ws.org/Vol-2807},
urn = {urn:nbn:de:0074-2807-4},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/2020.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BartonTE20,
author = {Adrien Barton and
Fumiaki Toyoshima and
Jean{-}Fran{\c{c}}ois Ethier},
editor = {Janna Hastings and
Frank Loebe},
title = {Clinical Documents and Their Parts},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--11},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/paperA.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:24 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BartonTE20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Bona20,
author = {Jonathan P. Bona},
editor = {Janna Hastings and
Frank Loebe},
title = {A Python Utility for Working with {OBO} Foundry Terms (short paper)},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--2},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/abstractR.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Bona20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BordeaNGHM20,
author = {Georgeta Bordea and
Jean No{\"{e}}l Nikiema and
Romain Griffier and
Thierry Hamon and
Fleur Mougin},
editor = {Janna Hastings and
Frank Loebe},
title = {{FIDEO:} Food Interactions with Drugs Evidence Ontology},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--10},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/paperL.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BordeaNGHM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BucheJDDIOW20,
author = {Patrice Buche and
Julien Cufi and
St{\'{e}}phane Dervaux and
Juliette Dibie and
Liliana Ibanescu and
Alrick Oudot and
Magalie Weber},
editor = {Janna Hastings and
Frank Loebe},
title = {A New Alignment Method Based on FoodOn as Pivot Ontology to Manage
Incompleteness in Nutritional Legacy Data Sources (short paper)},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--2},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/abstractS.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BucheJDDIOW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CooperLEBSMAJ20,
author = {Laurel Cooper and
Marie{-}Ang{\'{e}}lique Laporte and
Justin Elser and
Victoria Carollo Blake and
Taner Z. Sen and
Chris Mungall and
Elizabeth Arnaud and
Pankaj Jaiswal},
editor = {Janna Hastings and
Frank Loebe},
title = {The Plant Trait Ontology Links Wheat Traits for Crop Improvement and
Genomics (short paper)},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--2},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/abstractT.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CooperLEBSMAJ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CrottiBALDMB20,
author = {Ademar Crotti Jr. and
Maryam Basereh and
Yalemisew M. Abgaz and
Junli Liang and
Natalia Duda and
Nick McDonald and
Rob Brennan},
editor = {Janna Hastings and
Frank Loebe},
title = {The {ARK} Platform: Enabling Risk Management Through Semantic Web
Technologies},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--10},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/paperM.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CrottiBALDMB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FabryBE20,
author = {Paul Fabry and
Adrien Barton and
Jean{-}Fran{\c{c}}ois Ethier},
editor = {Janna Hastings and
Frank Loebe},
title = {{QUESTO} - An Ontology for Questionnaires},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--12},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/paperB.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FabryBE20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FabryBE20a,
author = {Paul Fabry and
Adrien Barton and
Jean{-}Fran{\c{c}}ois Ethier},
editor = {Janna Hastings and
Frank Loebe},
title = {An Ontological Representation of Sex and Gender Information (short
paper)},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--5},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/shortO.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FabryBE20a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FreedmanMWS20,
author = {Hayden Freedman and
Mark A. Miller and
Heather Williams and
Christian J. Stoeckert Jr.},
editor = {Janna Hastings and
Frank Loebe},
title = {Scaling and Querying a Semantically Rich, Electronic Healthcare Graph},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--11},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/paperC.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FreedmanMWS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GrutterK20,
author = {Rolf Gr{\"{u}}tter and
C. Maria Keet},
editor = {Janna Hastings and
Frank Loebe},
title = {Towards a Framework for Meaning Negotiation and Conflict Resolution
in Ontology Authoring},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--12},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/paperD.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GrutterK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/He0OWLHHBLDAXHY20,
author = {Yongqun He and
Hong Yu and
Edison Ong and
Yang Wang and
Yingtong Liu and
Anthony Huffman and
Hsin{-}Hui Huang and
John Beverley and
Asiyah Yu Lin and
William D. Duncan and
Sivaram Arabandi and
Jiangan Xie and
Junguk Hur and
Xiaolin Yang and
Luonan Chen and
Gilbert S. Omenn and
Brian D. Athey and
Barry Smith},
editor = {Janna Hastings and
Frank Loebe},
title = {{CIDO:} The Community-Based Coronavirus Infectious Disease Ontology},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--10},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/paperE.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/He0OWLHHBLDAXHY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HobbsGMSLKSMNJG20,
author = {Elizabeth T. Hobbs and
Stephen M. Goralski and
Ashley Mitchell and
Andrew Simpson and
Dorjan Leka and
Emmanuel Kotey and
Matt Sekira and
James B. Munro and
Suvarna Nadendla and
Rebecca Jackson and
Aitor Gonzalez{-}Agirre and
Martin Krallinger and
Michelle G. Giglio and
Ivan Erill},
editor = {Janna Hastings and
Frank Loebe},
title = {Corpora as Evolving Entities: Embedding Corpora in Biomedical Ontologies},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--11},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/paperF.pdf},
timestamp = {Fri, 21 Jun 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icbo/HobbsGMSLKSMNJG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HuffmanH20,
author = {Anthony Huffman and
Yongqun He},
editor = {Janna Hastings and
Frank Loebe},
title = {OGG-CoV: Ontology Representation and Analysis of Genes and Genomes
of Coronaviruses (short paper)},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--5},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/shortP.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HuffmanH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LaadharAJ20,
author = {Amir Laadhar and
{\'{E}}lcio Abrah{\~{a}}o and
Cl{\'{e}}ment Jonquet},
editor = {Janna Hastings and
Frank Loebe},
title = {Investigating One Million XRefs in Thirthy Ontologies from the {OBO}
World},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--12},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/paperG.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LaadharAJ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LemordantGGDGC20,
author = {Pierre Lemordant and
Bernard Gibaud and
Cyril Garde and
S{\'{e}}bastien Delarche and
Didier Goudet and
Marc Cuggia},
editor = {Janna Hastings and
Frank Loebe},
title = {Ontology-Based Classification of Radiological Procedures for Consistent
Sharing in Clinical Data Warehouses},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--11},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/paperN.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LemordantGGDGC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LinGLMDBSHHK20,
author = {Asiyah Yu Lin and
Stephan Gebel and
Qingliang Leon Li and
Sumit Madan and
Johannes Darms and
Evan Bolton and
Barry Smith and
Martin Hofmann{-}Apitius and
Yongqun Oliver He and
Alpha Tom Kodamullil},
editor = {Janna Hastings and
Frank Loebe},
title = {{CTO:} {A} Community-Based Clinical Trial Ontology and Its Applications
in PubChemRDF and SCAIView},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--12},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/paperH.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LinGLMDBSHHK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Lubiana20,
author = {Tiago Lubiana},
editor = {Janna Hastings and
Frank Loebe},
title = {Wikidata WikiProject {COVID-19:} Modelling the Pandemic in Real Time
(short paper)},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--2},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/abstractU.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Lubiana20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Lubiana20a,
author = {Tiago Lubiana},
editor = {Janna Hastings and
Frank Loebe},
title = {Current {OBO} Ontologies Are Not Sufficient to Annotate COVID-19-Related
Cell Types (short paper)},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--2},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/abstractV.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Lubiana20a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MeerHM20,
author = {Louis P. Ter Meer and
Jan Hazelzet and
Marleen de Mul},
editor = {Janna Hastings and
Frank Loebe},
title = {An Ontological Model for the (Digital) Patient (short paper)},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--2},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/abstractX.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MeerHM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MillerFS20,
author = {Mark A. Miller and
Hayden Freedman and
Christian J. Stoeckert Jr.},
editor = {Janna Hastings and
Frank Loebe},
title = {A Robust, Self-Training Classifier for Medication Strings, with Quantitative
and Semantic Confidence Metrics},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--12},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/paperI.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MillerFS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/PopovskiIVSEK20,
author = {Gorjan Popovski and
Gordana Ispirova and
Eva Valencic and
Riste Stojanov and
Tome Eftimov and
Barbara Korousic{-}Seljak},
editor = {Janna Hastings and
Frank Loebe},
title = {An Insight into Food Semantics: Review, Analysis, and Lessons Learnt
over Food-Related Studies (short paper)},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--2},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/abstractW.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/PopovskiIVSEK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ThaiG20,
author = {Jona Thai and
Michael Gr{\"{u}}ninger},
editor = {Janna Hastings and
Frank Loebe},
title = {A BioSequence Ontology from Molecular Structure},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--12},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/paperJ.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ThaiG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/VasilevskyEMHHR20,
author = {Nicole A. Vasilevsky and
Shahim Essaid and
Nicolas Matentzoglu and
Nomi L. Harris and
Melissa A. Haendel and
Peter N. Robinson and
Christopher J. Mungall},
editor = {Janna Hastings and
Frank Loebe},
title = {Mondo Disease Ontology: Harmonizing Disease Concepts Across the World
(short paper)},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--2},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/abstractY.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/VasilevskyEMHHR20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/VatascinovaNSZ20,
author = {Jana Vatascinov{\'{a}} and
Viet Bach Nguyen and
Vojtech Sv{\'{a}}tek and
Ondrej Zamazal},
editor = {Janna Hastings and
Frank Loebe},
title = {Best-Practice Patterns for Biomedical Ontologies: Moving Under the
Meta-Modeling Hood (short paper)},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--5},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/shortQ.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/VatascinovaNSZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WinckersW20,
author = {Laurent A. Winckers and
Egon L. Willighagen},
editor = {Janna Hastings and
Frank Loebe},
title = {Expanding the eNanoMapper Ontology (short paper)},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--2},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/abstractZ.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WinckersW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WishnieCDC20,
author = {Lauren Wishnie and
Alexander P. Cox and
Alexander D. Diehl and
Werner Ceusters},
editor = {Janna Hastings and
Frank Loebe},
title = {Foundations for a Realism-Based Ontology of Protein Aggregates},
booktitle = {Proceedings of the 11th International Conference on Biomedical Ontologies
{(ICBO)} joint with the 10th Workshop on Ontologies and Data in Life
Sciences {(ODLS)} and part of the Bolzano Summer of Knowledge (BoSK
2020), Virtual conference hosted in Bolzano, Italy, September 17,
2020},
series = {{CEUR} Workshop Proceedings},
volume = {2807},
pages = {1--10},
publisher = {CEUR-WS.org},
year = {2020},
url = {https://ceur-ws.org/Vol-2807/paperK.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WishnieCDC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/0001JS19,
author = {Jie Zheng and
John Judkins and
Christian J. Stoeckert Jr.},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {OWLmaker: An Application for Generating {OWL} Files from Tabular Text},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--3},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_54.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:23 +0100},
biburl = {https://dblp.org/rec/conf/icbo/0001JS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/0012OH19,
author = {Meng Liu and
Hong{-}Yu Ou and
Yongqun He},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {{ICEO:} a Biological Ontology for Representing and Analyzing the Bacterial
Integrative and Conjugative Element},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--10},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_23.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/0012OH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/0012OH19a,
author = {Meng Liu and
Hong{-}Yu Ou and
Yongqun He},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {OGG-Bac: Ontological Representation of Orthologous Bacterial Genes},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_46.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/0012OH19a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Al-RazganAHL19,
author = {Muna Al{-}Razgan and
Salwa Ali and
Sarah Mohamed Hassan and
Asiyah Yu Lin},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Tibb-Med-Linking-Onto: Knowledge Representation of Linking Prophetic
Medicine with Current Medical practices},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_61.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Al-RazganAHL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AlghamdiDGGH19,
author = {Dalia A. Alghamdi and
Damion M. Dooley and
Gurinder Gosal and
Emma J. Griffiths and
William W. L. Hsiao},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {{NGBO:} Introducing -omics Data into Biobanking Ontology},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_56.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AlghamdiDGGH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BartonFE19,
author = {Adrien Barton and
Paul Fabry and
Jean{-}Fran{\c{c}}ois Ethier},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {A Classification of Instructions in Drug Prescriptions and Pharmacist
Documents},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--7},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_22.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BartonFE19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BelloSS19,
author = {Susan M. Bello and
Cynthia L. Smith and
Lynn M. Schriml},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Integrating and Maintaining {OMIM} Cross-references in the Disease
Ontology},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--2},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_38.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BelloSS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BlfgehL19,
author = {Aisha Blfgeh and
Phillip Lord},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Wordified Ontologies: Evaluating a Novel Paradigm for Ontology Editing},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--7},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_20.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BlfgehL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BonaKNLDVPBP19,
author = {Jonathan P. Bona and
Aaron S. Kemp and
Tracy S. Nolan and
Linda J. Larson{-}Prior and
Aparna Das and
Tuhin Virmani and
Lakshmi Pillai and
Mathias Brochhausen and
Fred W. Prior},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Semantic Integration of Neuroinformatics Data in the Arkansas Image
Enterprise System with Open Biomedical Ontologies},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_55.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BonaKNLDVPBP19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BonaUBHB19,
author = {Jonathan P. Bona and
Joseph Utecht and
Sarah Bost and
Corey J. Hayes and
Mathias Brochhausen},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Building a Shared Ontology Use Patterns Repository},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--7},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_35.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BonaUBHB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BostES0SB19,
author = {Sarah Bost and
Niina Eklund and
Kaisa Silander and
Jie Zheng and
Christian J. Stoeckert Jr. and
Mathias Brochhausen},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Mapping Data Annotated with the Minimum Information About BIobank
data Sharing {(MIABIS)} 2.0 to the Ontology for Biobanking {(OBIB)}},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--2},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_52.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BostES0SB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CarmodyZVMMR19,
author = {Leigh C. Carmody and
Xingmin Aaron Zhang and
Nicole A. Vasilevsky and
Christopher J. Mungall and
Nicolas Matentzoglu and
Peter N. Robinson},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Medical Action Ontology (MAxO)},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_60.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CarmodyZVMMR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ClarksonR19,
author = {Melissa D. Clarkson and
Steven K. Roggenkamp},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Visual Representation for Knowledge Representation: Graphics Libraries
to Support Anatomy Terminologies and Ontologies},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--9},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_33.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ClarksonR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CookGN19,
author = {Daniel L. Cook and
John H. Gennari and
Maxwell Lewis Neal},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {The Ontology of Physics for Biology - {A} Companion to Basic Formal
Ontology},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--9},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_31.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CookGN19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/DooleyGGH19,
author = {Damion M. Dooley and
Ivan S. Gill and
Emma J. Griffiths and
William L. Hsiao},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {An Ontology-Driven Web Platform for Publishing Data Specifications
to Support Data Sharing},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_58.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/DooleyGGH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ElkinMS19,
author = {Peter L. Elkin and
Sarah Mullin and
Sylvester Sakilay},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Biomedical Informatics Investigator},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--5},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_37.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ElkinMS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FabryBE19,
author = {Paul Fabry and
Adrien Barton and
Jean{-}Fran{\c{c}}ois Ethier},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {{LABO:} an Ontology for Laboratory Test Prescription and Reporting},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_45.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FabryBE19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HarmseCRMOJ19,
author = {Henriette Harmse and
M{\'{e}}lanie Courtot and
Warren Read and
Nicolas Matentzoglu and
David Osumi{-}Sutherland and
Simon Jupp},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Where Does an Ontology Start?},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_44.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HarmseCRMOJ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HeOSDOSRS000SYY19,
author = {Yongqun He and
Edison Ong and
Jennifer Schaub and
Frederick Dowd and
John F. O'Toole and
Anastasios Siapos and
Christian G. Reich and
Sarah Seager and
Ling Wang and
Hong Yu and
Jie Zheng and
Christian J. Stoeckert Jr. and
Xiaolin Yang and
Sheng Yang and
Becky Steck and
Christopher Park and
Laura Barisoni and
Matthias Kretzler and
Jonathan Himmelfarb and
Ravi Iyengar and
Sean D. Mooney},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {{OPMI:} the Ontology of Precision Medicine and Investigation and its
Support for Clinical Data and Metadata Representation and Analysis},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--10},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_34.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HeOSDOSRS000SYY19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HeZMO19,
author = {Yongqun He and
Jie Zheng and
Anna Maria Masci and
Jihad S. Obeid},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Alignment of the Ontology of Host-Microbiome Interactions {(OHMI)}
High Level Terms with Existing {OBO} Ontologies},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_40.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HeZMO19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HuangLH19,
author = {Hsin{-}Hui Huang and
Meng Liu and
Yongqun He},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Ontological Modeling of Two-Component Regulatory Systems},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_41.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HuangLH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/KasmierL019,
author = {David Kasmier and
David Limbaugh and
Barry Smith},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Foundation for a Realist Ontology of Cognitive Processes},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--8},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_24.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/KasmierL019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/KulkarniCPSHS19,
author = {Resham Kulkarni and
Mike Conway and
Deep Patel and
Maria Shatz and
Stephanie Holmgren and
Charles Schmitt},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Catalog for Ontologies Towards Semantic Integration Across Environmental
Health Science Research Data},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_51.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/KulkarniCPSHS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/KushidaKYYKNTT19,
author = {Tatsuya Kushida and
Kouji Kozaki and
Yasunori Yamamoto and
Atsuko Yamaguchi and
Takahiro Kawamura and
Takako Nakagawa and
Yuka Tateisi and
Toshihisa Takagi},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Reconstruction of Hierarchical Structures in a Thesaurus-based Ontology
through Curation by Domain Experts},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_47.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/KushidaKYYKNTT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LimbaughKC019,
author = {David Limbaugh and
David Kasmier and
Werner Ceusters and
Barry Smith},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Warranted Diagnosis},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--10},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_26.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LimbaughKC019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Lin19,
author = {Asiyah Yu Lin},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Opportunities for Ontologies in Medical Device Total Product Life
Cycle {(TPLC)} Evaluation},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_59.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Lin19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LiuH19,
author = {Kaiyong Liu and
Yongqun He},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Ontological Derivation of Mendeleev's Periodic Table of Chemical Elements},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_39.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LiuH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MerrellLA019,
author = {Eric Merrell and
David Limbaugh and
Alex Anderson and
Barry Smith},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Mental Capabilities},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--7},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_25.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MerrellLA019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MillerS19,
author = {Mark A. Miller and
Christian J. Stoeckert Jr.},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {A Collaborative, Realism-Based, Electronic Healthcare Graph: Public
Data, Common Data Models, and Practical Instantiation},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--10},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_28.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MillerS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/NikiemaB19,
author = {Jean No{\"{e}}l Nikiema and
Olivier Bodenreider},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Comparing the Representation of Medicinal Products in RxNorm and {SNOMED}
{CT} - Consequences on interoperability},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--6},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_21.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/NikiemaB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OngH19,
author = {Edison Ong and
Yongqun He},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Ontolion: {A} Web-based Integrative Ontology Development Platform},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_50.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OngH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SchulerMSC19,
author = {James Schuler and
William Mangione and
Ram Samudrala and
Werner Ceusters},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Foundations for a Realism-based Drug Repurposing Ontology},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--8},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_29.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SchulerMSC19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SerraDDD19,
author = {Lucas M. Serra and
Michael G. Dwyer and
William D. Duncan and
Alexander D. Diehl},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Early steps of an Ontology for Magnetic Resonance Imaging: {MRIO}},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--5},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_32.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SerraDDD19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Smith19,
author = {Barry Smith},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Ontology as Product-Service System: Lessons Learned from GO, {BFO}
and {DOLCE}},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--9},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_14.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Smith19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SmithWDJD19,
author = {Mackenzie T. Smith and
Lauren M. Wishnie and
William D. Duncan and
Mark Jensen and
Alexander D. Diehl},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Tripartite Term Enrichment Analysis of Multiple Sclerosis Patient
Reported Outcomes},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_62.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SmithWDJD19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Toyoshima19,
author = {Fumiaki Toyoshima},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Representing Causation: {A} Dispositional Perspective},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--8},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_15.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Toyoshima19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Toyoshima19a,
author = {Fumiaki Toyoshima},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Roles and Their Siblings in Basic Formal Ontology},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--9},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_16.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Toyoshima19a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Toyoshima19b,
author = {Fumiaki Toyoshima},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Towards an Ontology-Driven Machine Learning Approach to the Diagnosis
Classification Problem in Autism Spectrum Disorder},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_43.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Toyoshima19b.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/VajdaOSMHT19,
author = {Jonathan M. Vajda and
J. Neil Otte and
Cooper Stansbury and
Frank J. Manion and
Marcelline R. Harris and
Cui Tao},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Using Stases to Enrich Queries for When and Where Regulations Are
in Force},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_53.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/VajdaOSMHT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WanOH19,
author = {Ling Wan and
Edison Ong and
Yongqun He},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {{ICDO:} Ontological Representation of the International Classification
of Diseases {(ICD)} and its Application in English and Chinese Healthy
Data Standardization},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_30.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WanOH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Wang19,
author = {Rong{-}Lin Wang},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Ontology-based Semantic Mapping of Adverse Outcome Pathways},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_36.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Wang19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WishnieCD19,
author = {Lauren Wishnie and
Alexander P. Cox and
Alexander D. Diehl},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {Representation of Protein Aggregates in an Ontological Framework},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_42.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WishnieCD19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/YamagataINY19,
author = {Yuki Yamagata and
Yoshinobu Igarashi and
Noriyuki Nakatsu and
Hiroshi Yamada},
editor = {Alexander D. Diehl and
William D. Duncan and
Gloria Sanso},
title = {{TXPO:} {A} Toxic Process Ontology for Better Understanding of Drug-Induced
Liver Injury},
booktitle = {Proceedings of the 10th International Conference on Biomedical Ontology
{(ICBO} 2019), Buffalo, New York, USA, July 30 - August 2, 2019},
series = {{CEUR} Workshop Proceedings},
volume = {2931},
pages = {1--8},
publisher = {CEUR-WS.org},
year = {2019},
url = {https://ceur-ws.org/Vol-2931/ICBO\_2019\_paper\_11.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/YamagataINY19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/00250PGE18,
author = {Hao Liu and
Ling Zheng and
Yehoshua Perl and
James Geller and
Gai Elhanan},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Can a Convolutional Neural Network Support Auditing of {NCI} Thesaurus
Neoplasm Concepts?},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_35.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:24 +0100},
biburl = {https://dblp.org/rec/conf/icbo/00250PGE18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BartonGE18,
author = {Adrien Barton and
Olivier Grenier and
Jean{-}Fran{\c{c}}ois Ethier},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {The Identity and Mereology of Pathological Dispositions},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_13.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BartonGE18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BeasleyM18,
author = {Lucas Beasley and
Prashanti Manda},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Comparison of Natural Language Processing Tools for Automatic Gene
Ontology Annotation of Scientific Literature},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_4.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BeasleyM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BelloHSR18,
author = {Susan M. Bello and
Terry F. Hayamizu and
Cynthia L. Smith and
Martin Ringwald},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Using Equivalence Axioms from the Mammalian Phenotype Ontology to
Facilitate Phenotype and Expression Comparisons},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_8.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BelloHSR18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BodenreiderJ18,
author = {Olivier Bodenreider and
Julie James},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {The New {SNOMED} {CT} International Medicinal Product Model},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_36.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BodenreiderJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BonaNB18,
author = {Jonathan P. Bona and
Tracy S. Nolan and
Mathias Brochhausen},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Ontology-Enhanced Representations of Non-Image Data in The Cancer
Image Archive},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_37.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BonaNB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BraunL18,
author = {Ian Braun and
Carolyn J. Lawrence{-}Dill},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Computational Classification of Phenologs Across Biological Diversity},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_58.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BraunL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Clarkson18,
author = {Melissa D. Clarkson},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Developing Graphic Libraries to Accompany the Craniofacial Human Ontology},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_54.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Clarkson18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ClarksonW18,
author = {Melissa D. Clarkson and
Mark E. Whipple},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Does the Foundational Model of Anatomy Ontology Provide a Knowledgebase
for Learning and Assessment in Anatomy Education?},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_14.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ClarksonW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/DinakarpandianL18,
author = {Deendayal Dinakarpandian and
Michaela Liedtke and
Mark A. Musen and
Bhavish Dinakar},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {{TOCSOC:} {A} Temporal Ontology for Comparing the Survival Outcomes
of Clinical Trials in Oncology},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_39.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/DinakarpandianL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/DuncanTSLWZRHMR18,
author = {William D. Duncan and
Thankam Thyvalikakath and
Zasim Azhar Siddiqui and
Michelle LaPradd and
Chen Wen and
Jim Zheng and
Anna Roberts and
Daniel Hood and
Aparna Manimangala and
Donald Rindal and
Mark Jurkovich and
Tracy Shea and
David Bogacz and
Terrence Yu and
Jeffry Fellows and
Valerie Gordan and
Gregg H. Gilbert},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Using the Oral Health and Disease Ontology to Study Dental Outcomes
in National Dental {PBRN} Practices},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_61.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/DuncanTSLWZRHMR18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/DuncanWMK18,
author = {William D. Duncan and
Philip Whalen and
Aditya Muralidharan and
Jonathan Kiddy},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Enhancing Semantic Analysis of Pathology Reports},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_60.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/DuncanWMK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/EndaraBCJLC18,
author = {Lorena Endara and
J. Gordon Burleigh and
Laurel Cooper and
Pankaj Jaiswal and
Marie{-}Ang{\'{e}}lique Laporte and
Hong Cui},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {A Natural Language Processing Pipeline to Extract Phenotypic Data
from Formal Taxonomic Descriptions with a Focus on Flagellate Plants},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_50.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/EndaraBCJLC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FarrellB18,
author = {Brenda Farrell and
Jason Bengtson},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Ontology Based Data Architecture to Promote Data Sharing in Electrophysiology},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_3.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FarrellB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FernandoM18,
author = {Pasan Fernando and
Erliang Zeng Paula Mabee},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {The Integrative use of Anatomy Ontology and Protein-protein Interaction
Networks to Study Evolutionary Phenotypic Transitions},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_52.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FernandoM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GourdineVWBH18,
author = {Jean{-}Philippe F. Gourdine and
Nicole A. Vasilevsky and
Lilly Winfree and
Matthew H. Brush and
Melissa A. Haendel},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Expanding the Molecular Glycophenotype Ontology to include model organisms
and acquired diseases},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_38.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GourdineVWBH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GuptaXJTR18,
author = {Amit Gupta and
Weijia Xu and
Pankaj Jaiswal and
Crispin Taylor and
Jennifer Regala},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Domain Informational Vocabulary Extraction Experiences with Publication
Pipeline Integration and Ontology Curation},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_43.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GuptaXJTR18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HalperOPAM18,
author = {Michael Halper and
Christopher Ochs and
Yehoshua Perl and
Sivaram Arabandi and
Mark A. Musen},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Quality Assurance of Ontology Content Reuse},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_15.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HalperOPAM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HayesBB18,
author = {Corey J. Hayes and
Jonathan P. Bona and
Mathias Brochhausen},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Towards the Development of an Opioid Misuse Ontology},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_56.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HayesBB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HeSOMLBKHBAIHM18,
author = {Yongqun He and
Becky Steck and
Edison Ong and
Laura Mariani and
Chrysta Lienczewski and
Ulysses J. Balis and
Matthias Kretzler and
Jonathan Himmelfarb and
John F. Bertram and
Evren U. Azeloglu and
Ravi Iyengar and
Deborah Hoshizaki and
Sean D. Mooney},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {{KTAO:} {A} Kidney Tissue Atlas Ontology to Support Community-Based
Kidney Knowledge Base Development and Data Integration},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_28.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HeSOMLBKHBAIHM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HollanderGL18,
author = {Allan Hollander and
Christine Geith and
Matthew Lange},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {An Expertise Ontology for Cooperative Extension},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_30.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HollanderGL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HorridgeGNTM18,
author = {Matthew Horridge and
Rafael S. Gon{\c{c}}alves and
Csongor I. Nyulas and
Tania Tudorache and
Mark A. Musen},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Prot{\'{e}}g{\'{e}} 5.5 - Improvements for Editing Biomedical
Ontologies},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_23.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HorridgeGNTM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LaulederkindHWB18,
author = {Stanley J. F. Laulederkind and
G. Thomas Hayman and
Shur{-}Jen Wang and
Elizabeth R. Bolton and
Jennifer R. Smith and
Marek Tutaj and
Jeff de Pons and
Mary Shimoyama and
Melinda R. Dwinell},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Adapting Disease Vocabularies for Curation at the Rat Genome Database},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_2.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LaulederkindHWB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LiuCZPG18,
author = {Hao Liu and
Ling Chen and
Ling Zheng and
Yehoshua Perl and
James Geller},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {A Quality Assurance Methodology for ChEBI Ontology Focusing on Uncommonly
Modeled Concepts},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_7.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LiuCZPG18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MabeeBDLMV18,
author = {Paula M. Mabee and
James P. Balhoff and
Wasila M. Dahdul and
Hilmar Lapp and
Christopher J. Mungall and
Todd J. Vision},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Reasoning over Anatomical Homology in the Phenoscape {KB}},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_62.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MabeeBDLMV18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MandaBM18,
author = {Prashanti Manda and
Lucas Beasley and
Somya D. Mohanty},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Taking a Dive: Experiments in Deep Learning for Automatic Ontology-Based
Annotation of Scientific Literature},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_18.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MandaBM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MandaV18,
author = {Prashanti Manda and
Todd J. Vision},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {On the Statistical Sensitivity of Semantic Similarity Metrics},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_47.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MandaV18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MasciMREO0S018,
author = {Anna Maria Masci and
Shannon McCall and
Alessandro Racioppi and
Helena Judge Ellis and
Jihad S. Obeid and
Barry Smith and
Christian J. Stoeckert Jr. and
Jie Zheng},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Standardization of the Histopathology Cancer Report: An Ontological
Approach},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_10.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MasciMREO0S018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MatentzogluO18,
author = {Nicolas Matentzoglu and
David Osumi{-}Sutherland},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Reconciling Ontology Definitions using the Ontology Pattern Reconciliation
Workbench and the {DOSDP} Framework},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_22.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MatentzogluO18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MeierLECPJP18,
author = {Austin Meier and
Marie{-}Ang{\'{e}}lique Laporte and
Justin Elser and
Laurel Cooper and
Justin Preece and
Pankaj Jaiswal and
Jorrit H. Poelen},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {{OOPS:} The Ontology of Plant Stress, {A} Semi-Automated Standardization
Methodology},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_25.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MeierLECPJP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MejiaC18,
author = {Citlalli Mej{\'{\i}}a and
Julio Collado{-}Vides},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {A Falsification Approach to Create and Check Ontology Definitions},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_16.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MejiaC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/NaravaneL18,
author = {Tarini Naravane and
Matthew Lange},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Ontological Framework for Representation of Tractable Flavor: Food
Phenotype, Sensation, Perception},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_45.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/NaravaneL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OngH018,
author = {Edison Ong and
Yongqun He and
Jie Zheng},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {eXtensible Ontology Development {(XOD)} using Web-based Ontoanimal
Tools},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_24.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OngH018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OtteSVMUHHOBDT18,
author = {J. Neil Otte and
Cooper Stansbury and
Jonathan Vajda and
Frank J. Manion and
Elizabeth Umberfield and
Yongqun He and
Marcelline R. Harris and
Jihad S. Obeid and
Mathias Brochhausen and
William D. Duncan and
Cui Tao},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Coordinated Evolution of Ontologies of Informed Consent},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_59.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OtteSVMUHHOBDT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/PellsFSFBCCJLNP18,
author = {Troy J. Pells and
Malcolm E. Fisher and
Erik Segerdell and
Joshua D. Fortriede and
Kevin A. Burns and
Stanley Chu and
Praneet Chaturvedi and
Christina James{-}Zorn and
Vaneet Lotay and
Mardi J. Nenni and
Virgilio G. Ponferrada and
Dong Zhou Wang and
Ying Wang and
Kamran Karimi and
Peter D. Vize and
Aaron M. Zorn},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Visualization of Gene Expression and Expression as a Phenotype with
the XPO, {XAO} and {DO} using a Combination of Experimental Data Sources},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_53.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/PellsFSFBCCJLNP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SawesiJD18,
author = {Suhila A. Sawesi and
Josette Jones and
William Duncan},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {An Ontology For Formal Representation Of Medication Adherence-Related
Knowledge: Case Study In Breast Cancer},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_57.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SawesiJD18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SchekotihinRSHT18,
author = {Konstantin Schekotihin and
Patrick Rodler and
Wolfgang Schmid and
Matthew Horridge and
Tania Tudorache},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Test-Driven Ontology Development in Prot{\'{e}}g{\'{e}}},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_31.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SchekotihinRSHT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SchekotihinRSHT18a,
author = {Konstantin Schekotihin and
Patrick Rodler and
Wolfgang Schmid and
Matthew Horridge and
Tania Tudorache},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {A Prot{\'{e}}g{\'{e}} Plug-In for Test-Driven Ontology Development},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_9.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SchekotihinRSHT18a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/StoeckertBFMW18,
author = {Christian J. Stoeckert Jr. and
David L. Birtwell and
Hayden Freedman and
Mark A. Miller and
Heather Williams},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Transforming and Unifying Research with Biomedical Ontologies: The
Penn {TURBO} Project},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_12.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/StoeckertBFMW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/TauberBDMO18,
author = {Rebecca Tauber and
James P. Balhoff and
Eric Douglass and
Chris Mungall and
James A. Overton},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Standardizing Ontology Workflows Using {ROBOT}},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_46.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/TauberBDMO18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/TauberMNCCG18,
author = {Rebecca Tauber and
James B. Munro and
Suvarna Nadendla and
Binika Chunara and
Marcus C. Chibucos and
Michelle G. Giglio},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Current Development in the Evidence and Conclusion Ontology {(ECO)}},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_19.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/TauberMNCCG18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/TrigkakisPMEKFM18,
author = {Dimitrios Trigkakis and
Justin Preece and
Austin Meier and
Justin Elser and
Kristian Kvilekval and
Dmitry V. Fedorov and
B. S. Manjunath and
Pankaj Jaiswal and
Sinisa Todorovic},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Planteome {\&} BisQue: Automating Image Annotation with Ontologies
using Deep-Learning Networks},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_11.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/TrigkakisPMEKFM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/VitaPOCK18,
author = {Randi Vita and
Bjoern Peters and
James A. Overton and
Kei{-}Hoi Cheung and
Steven H. Kleinstein},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Formalizing the Representation of Immune Exposures for Human Immunology
Studies},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_41.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/VitaPOCK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WelterJO18,
author = {Danielle Welter and
Simon Jupp and
David Osumi{-}Sutherland},
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Human Cell Atlas Ontology},
booktitle = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285/ICBO\_2018\_paper\_40.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WelterJO18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icbo/2017,
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2137},
urn = {urn:nbn:de:0074-2137-1},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/2017.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icbo/2018,
editor = {Pankaj Jaiswal and
Laurel Cooper and
Melissa A. Haendel and
Christopher J. Mungall},
title = {Proceedings of the 9th International Conference on Biological Ontology
{(ICBO} 2018), Corvallis, Oregon, USA, August 7-10, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2285},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2285},
urn = {urn:nbn:de:0074-2285-4},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/2018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AfandiRBZMI17,
author = {Radhi Rafiee Afandi and
Abduljalil Radman and
Mahadi Bahari and
Lailatul Qadri Zakaria and
Muzaimi Mustapha and
Waidah Ismail},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Ontology Development in Patients Information System for Stroke Rehabilitation},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_15.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:24 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AfandiRBZMI17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AlghamdiDGGBH17,
author = {Dalia A. Alghamdi and
Damion M. Dooley and
Gurinder Gosal and
Emma J. Griffiths and
Fiona S. L. Brinkman and
William W. L. Hsiao},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {FoodOn: {A} Semantic Ontology Approach for Mapping Foodborne Disease
Metadata},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_32.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AlghamdiDGGBH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AlqasabES17,
author = {Mariam Alqasab and
Suzanne M. Embury and
Sandra de F. Mendes Sampaio},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {A Maturity Model for Biomedical Data Curation},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_18.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AlqasabES17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AlqasabES17a,
author = {Mariam Alqasab and
Suzanne M. Embury and
Sandra de F. Mendes Sampaio},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {A Tentative Maturity Model for Biomedical Data Curation},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_19.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AlqasabES17a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AlshammryL17,
author = {Nizal Alshammry and
Phillip Lord},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Identitas: {A} Better Way To Be Meaningless},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_33.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AlshammryL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Balasubramanian17,
author = {Dharani K. Balasubramanian and
Jamillah Z. Khan and
Jiang Bian and
Yi Guo and
William R. Hogan and
Amanda Hicks},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Ontology of Cancer Related Social-Ecological Variables},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/ws\_ONCONTO\_paper\_3.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Balasubramanian17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BalhoffBCCFHMRV17,
author = {James P. Balhoff and
Matthew H. Brush and
Laura Christopherson and
Sherri de Coronado and
Gilberto Fragoso and
Melissa A. Haendel and
Christopher J. Mungall and
Kimberly Robasky and
Nicole A. Vasilevsky and
Lawrence W. Wright},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Tailoring the {NCI} Thesaurus for Use in The {OBO} Library},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/ws\_ONCONTO\_paper\_4.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BalhoffBCCFHMRV17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BartonJRE17,
author = {Adrien Barton and
Ludger Jansen and
Arnaud Rosier and
Jean{-}Fran{\c{c}}ois Ethier},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {What is a Risk? {A} Formal Representation of Risk of Stroke for People
with Atrial Fibrillation},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_38.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BartonJRE17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BlfgehL17,
author = {Aisha Blfgeh and
Phillip Lord},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {User and Developer Interaction with Editable and Readable Ontologies},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_28.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BlfgehL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BonaC17,
author = {Jonathan P. Bona and
Werner Ceusters},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Scrutinizing the Relationships Between {SNOMED} {CT} Concepts and
Semantic Tags},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_34.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BonaC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BonaGZZB17,
author = {Jonathan P. Bona and
John Grohol and
Meredith N. Zozus and
Robert Zozus and
Mathias Brochhausen},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Toward Using Ontologies to Improve Results in Searches for Mental
Health Information},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_37.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BonaGZZB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CookGN17,
author = {Daniel L. Cook and
John H. Gennari and
Maxwell Lewis Neal},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Extending the Ontology of Physics for Biology with Thermodynamics},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_35.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CookGN17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Donohue17,
author = {Brian Donohue},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Toward a BFO-Based Deontic Ontology},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/ws\_SoLe\_paper\_1.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Donohue17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/DuncanGD17,
author = {William D. Duncan and
Carmelo Gaudioso and
Alexander D. Diehl},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Towards an Ontology for Representing Malignant Neoplasms},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/ws\_ONCONTO\_paper\_5.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/DuncanGD17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GaltonFLR17,
author = {Antony Galton and
Shereen Fouad and
Gabriel Landini and
David A. Randell},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Errors and Artefacts in Histopathological Imaging},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_11.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GaltonFLR17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HalawaniFL17,
author = {Mohammad K. Halawani and
Rob Forsyth and
Phillip W. Lord},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {A Literature Based Approach to Define the Scope of Biomedical Ontologies:
{A} Case Study on a Rehabilitation Therapy Ontology},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_30.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HalawaniFL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HenrySMDGF17,
author = {Vincent Henry and
Fatiha Sa{\"{\i}}s and
Elodie Marchadier and
Juliette Dibie and
Anne Goelzer and
Vincent Fromion},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {BiPOm: Biological Interlocked Process Ontology for Metabolism. How
to Infer Molecule Knowledge from Biological Process?},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_31.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HenrySMDGF17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HicksH17,
author = {Amanda Hicks and
William R. Hogan},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {That Which we Call a Pediatrician Would by Any Other Name a Child
Treat (or not)},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/ws\_SoLe\_paper\_2.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HicksH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/JarrarC17,
author = {Mustafa Jarrar and
Werner Ceusters},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Classifying Processes and Basic Formal Ontology},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_14.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/JarrarC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/JensenD17,
author = {Mark Jensen and
Alexander D. Diehl},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Integrating an Ontology for {RDOC} with Existing Biomedical Ontologies},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_36.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/JensenD17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/JuppLSVBP17,
author = {Simon Jupp and
Thomas Liener and
Sirarat Sarntivijai and
Olga Vrousgou and
Tony Burdett and
Helen E. Parkinson},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {OxO - {A} Gravy of Ontology Mapping Extracts},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_27.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/JuppLSVBP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/KushidaKTWMMKT17,
author = {Tatsuya Kushida and
Kouji Kozaki and
Yuka Tateisi and
Katsutaro Watanabe and
Takeshi Masuda and
Katsuji Matsumura and
Takahiro Kawamura and
Toshihisa Takagi},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Efficient Construction of a New Ontology for Life Sciences by Sub-classifying
Related Terms in the Japan Science, Technology Agency Thesaurus},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_20.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/KushidaKTWMMKT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LordS17,
author = {Phillip W. Lord and
Robert Stevens},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Facets, Tiers and Gems: Ontology Patterns for the Hypernormalisation},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_21.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LordS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MisirliL17,
author = {Goksel Misirli and
Phillip Lord},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Tawny-SBOL: Using Ontologies to Design and Constrain Genetic Circuits},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_40.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MisirliL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/NorrisFMWTAJKM17,
author = {Emma Norris and
Ailbhe Finnerty and
Marta M. Marques and
Robert West and
James Thomas and
Pol Mac Aonghusa and
Marie Johnston and
Michael P. Kelly and
Susan Michie},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {The Human Behaviour-Change Project: Developing a Behaviour Change
Intervention Ontology},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_13.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/NorrisFMWTAJKM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OngH17,
author = {Edison Ong and
Yongqun He},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {{OLOBO:} {A} New Ontology for Linking and Integrating Open Biological
and Biomedical Ontologies},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_26.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OngH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/RiveraMKCNW17,
author = {Chris Pacheco Rivera and
Rowland Mosbergen and
Othmar Korn and
Tyrone Chen and
Isha Nagpal and
Christine A. Wells},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Ontology Challenges for the Stem Cell Community: Towards Integrative
Data Mining in the Stemformatics Atlas},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_17.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/RiveraMKCNW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Rodrigues0R17,
author = {Jean Marie Rodrigues and
Stefan Schulz and
Alan L. Rector},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Scrutinizing the Axiomatic Basis of {SNOMED} {CT:} How Confused is
it by the Ambiguous Terminology Paradigm?},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_12.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Rodrigues0R17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/RomeroODVWEGM17,
author = {Marcos Mart{\'{\i}}nez Romero and
Martin J. O'Connor and
Michael Dorf and
Jennifer Vendetti and
Debra Willrett and
Attila L. Egyedi and
John Graybeal and
Mark A. Musen},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Supporting Ontology-Based Standardization of Biomedical Metadata in
the {CEDAR} Workbench},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_23.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/RomeroODVWEGM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/TauberC17,
author = {Rebecca Tauber and
Marcus C. Chibucos},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Logical Axiomatization of the Evidence {\&} Conclusion Ontology
{(ECO)} by Integrating External Ontology Classes},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_25.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/TauberC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ToyoshimaMI17,
author = {Fumiaki Toyoshima and
Riichiro Mizoguchi and
Mitsuru Ikeda},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Causation and the River Flow Model of Diseases},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_16.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ToyoshimaMI17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/VasilevskyBMO0B17,
author = {Nicole A. Vasilevsky and
James P. Balhoff and
Christopher J. Mungall and
David Osumi{-}Sutherland and
Sebastian K{\"{o}}hler and
Susan M. Bello and
Cynthia L. Smith and
Peter N. Robinson and
Melissa A. Haendel},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Aligning the Human Phenotype and Mammalian Phenotype Ontology using
Dead Simple Ontology Design Patterns},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_22.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/VasilevskyBMO0B17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WangG17,
author = {Lucy Lu Wang and
John H. Gennari},
editor = {Matthew Horridge and
Phillip Lord and
Jennifer D. Warrender},
title = {Similarity Metrics for Determining Overlap Among Biological Pathways},
booktitle = {Proceedings of the 8th International Conference on Biomedical Ontology
{(ICBO} 2017), Newcastle-upon-Tyne, United Kingdom, September 13th
- 15th, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {2137},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-2137/paper\_29.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WangG17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/0003HHH16,
author = {Daniel Welch and
Amanda Hicks and
Josh Hanna and
William R. Hogan},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {A Semantic Web Representation of Entire Populations},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT602\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:23 +0100},
biburl = {https://dblp.org/rec/conf/icbo/0003HHH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AlshahraniAH16,
author = {Mona Alshahrani and
Hussein Almashouq and
Robert Hoehndorf},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {{SPARQL2OWL:} Towards Bridging the Semantic Gap Between {RDF} and
{OWL}},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/D102\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AlshahraniAH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BadaVHH16,
author = {Michael Bada and
Nicole A. Vasilevsky and
Melissa A. Haendel and
Lawrence Hunter},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Gold-Standard Ontology-Based Annotation of Concepts in Biomedical
Text in the {CRAFT} Corpus: Updates and Extensions},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP08\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BadaVHH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BaerL16,
author = {Aaron Baer and
Matthew Lange},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Uc{\_}Sense: An Ontology for Scientifically-based Unambiguous Characterization
of Sensory Experiences},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP11\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BaerL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Balhoff16,
author = {James P. Balhoff},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {The Phenoscape Knowledgebase: Tools and APIs for Computing Across
Phenotypes from Evolutionary Diversity and Model Organisms},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/D103-W14-04\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Balhoff16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BissonMGP16,
author = {Jonathan Bisson and
James McAlpine and
James Graham and
Guido Pauli},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {NAPRALERT, from a Historical Information Silo to a Linked Resource
Able to Address the New Challenges in Natural Products Chemistry and
Pharmacognosy},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP12\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BissonMGP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Bodenreider16,
author = {Olivier Bodenreider},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Identifying Missing Hierarchical Relations in {SNOMED} {CT} from Logical
Definitions Based on the Lexical Features of Concept Names},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT601\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Bodenreider16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BonaSC16,
author = {Jonathan P. Bona and
Selja Sepp{\"{a}}l{\"{a}} and
Werner Ceusters},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Analysis of {SNOMED} "Bleeding" Concepts {\&} Terms},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP10\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BonaSC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BradfordSTR16,
author = {Yvonne M. Bradford and
Ceri E. Van Slyke and
Sabrina Toro and
Sridhar Ramachandran},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {The Zebrafish Experimental Conditions Ontology Systemizing Experimental
Descriptions in {ZFIN}},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP25\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BradfordSTR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BrochhausenESHB16,
author = {Mathias Brochhausen and
Philip E. Empey and
Jodi Schneider and
William R. Hogan and
Richard D. Boyce},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Adding Evidence Type Representation to {DIDEO}},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP02\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BrochhausenESHB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BrushSH16,
author = {Matthew H. Brush and
Kent A. Shefchek and
Melissa A. Haendel},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {{SEPIO:} {A} Semantic Model for the Integration and Analysis of Scientific
Evidence},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT605\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BrushSH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BurnsWDH16,
author = {Gully A. P. C. Burns and
Anita de Waard and
Pradeep Dasigi and
Eduard H. Hovy},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Cycles of Scientific Investigation in Discourse - Machine Reading
Methods for the Primary Research Contributions of a Paper},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BT102\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BurnsWDH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ButtigiegJWM16,
author = {Pier Luigi Buttigieg and
Mark Jensen and
Ramona L. Walls and
Christopher J. Mungall},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Environmental Semantics for Sustainable Development in an Interconnected
Biosphere},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT201\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ButtigiegJWM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CamaraDDL16,
author = {Gaoussou Camara and
Sylvie Despr{\`{e}}s and
Rim Djedidi and
Moussa Lo},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Towards a Schistosomiasis Ontology {(IDOSCHISTO)} Extending the Infectious
Disease Ontology},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP01\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CamaraDDL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CaraccioloBA16,
author = {Caterina Caracciolo and
Tom Baker and
Elizabeth Arnaud},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Global Agricultural Concept Scheme: {A} Hub for Agricultural Vocabularies},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP29\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CaraccioloBA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ChibucosNMMOVBG16,
author = {Marcus C. Chibucos and
Suvarna Nadendla and
James B. Munro and
Elvira Mitraka and
Dustin Olley and
Nicole A. Vasilevsky and
Matthew H. Brush and
Michelle G. Giglio},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Supporting Database Annotations and Beyond with the Evidence {\&}
Conclusion Ontology {(ECO)}},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP30\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ChibucosNMMOVBG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Clarkson16,
author = {Melissa D. Clarkson},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Representation of Parts within the Foundational Model of Anatomy Ontology},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT704\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Clarkson16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ColetL16,
author = {Emeline Colet and
Matthew Lange},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {uc{\_}Milk: An Ontology for Scientifically-based Unambiguous Characterization
of Mammalian Milk, their Composition and the Biological Processes
Giving Rise to their Creation},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP15\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ColetL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ComeauDKWWL16,
author = {Donald C. Comeau and
Rezarta Islamaj Dogan and
Sun Kim and
Chih{-}Hsuan Wei and
W. John Wilbur and
Zhiyong Lu},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {BioCconvert: {A} Conversion Tool Between BioC and PubAnnotation},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BT304\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ComeauDKWWL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CooperMEPXKQZTJ16,
author = {Laurel Cooper and
Austin Meier and
Justin Elser and
Justin Preece and
Xu Xu and
Ryan Kitchen and
Botong Qu and
Eugene Zhang and
Sinisa Todorovic and
Pankaj Jaiswal and
Marie{-}Ang{\'{e}}lique Laporte and
Elizabeth Arnaud and
Seth Carbon and
Chris Mungall and
Barry Smith and
Georgios V. Gkoutos and
John H. Doonan},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {The Planteome Project},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT406-IP35\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CooperMEPXKQZTJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CourtotMM16,
author = {M{\'{e}}lanie Courtot and
James Malone and
Chris Mungall},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Ten Simple Rules for Biomedical Ontology Development},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT404\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CourtotMM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/DevareALVAB16,
author = {Medha Devare and
C{\'{e}}line Aubert and
Marie{-}Ang{\'{e}}lique Laporte and
L{\'{e}}o Valette and
Elizabeth Arnaud and
Pier Luigi Buttigieg},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Data-driven Agricultural Research for Development: {A} Need for Data
Harmonization Via Semantics},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT205\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/DevareALVAB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/DooleyGBH16,
author = {Damion M. Dooley and
Emma J. Griffiths and
Fiona S. L. Brinkman and
William W. L. Hsiao},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {An {OBI} Ontology Datum Proof Sheet},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP24\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/DooleyGBH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/DuncanABHSRD16,
author = {William D. Duncan and
Travis Allen and
Jonathan P. Bona and
Olivia Helfer and
Barry Smith and
Alan Ruttenberg and
Alexander D. Diehl},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {The ImmPort Antibody Ontology},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP18\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/DuncanABHSRD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Durupinar-Babur16,
author = {Funda Durupinar{-}Babur and
Metin Can Siper and
Ugur Dogrusoz and
Istemi Bahceci and
Ozgun Babur and
Emek Demir},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Collaborative Workspaces for Pathway Curation},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BT103\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Durupinar-Babur16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ElayavilliRL16,
author = {Ravikumar Komandur Elayavilli and
Majid Rastegar{-}Mojarad and
Hongfang Liu},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {MutD - {A} PubMed Scale Resource for Protein Mutation-Disease Relations
through Bio-Medical Literature Mining},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BT203\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ElayavilliRL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/EthierTLB16,
author = {Jean{-}Fran{\c{c}}ois Ethier and
Ryeyan Taseen and
Luc Lavoie and
Adrien Barton},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Improving the Semantics of Drug Prescriptions with a Realist Ontology},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT603\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/EthierTLB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FarinelliAES16,
author = {Fernanda Farinelli and
Maur{\'{\i}}cio Barcellos de Almeida and
Peter L. Elkin and
Barry Smith},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Dealing with Social and Legal Entities in the Obstetric and Neonatal
Domain},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT403\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FarinelliAES16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FarinelliAES16a,
author = {Fernanda Farinelli and
Maur{\'{\i}}cio Barcellos de Almeida and
Peter L. Elkin and
Barry Smith},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Dealing with Elements of Medical Encounters: an Approach Based on
the Ontological Realism},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP27\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FarinelliAES16a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Florez-ArangoPS16,
author = {Jose F. Florez{-}Arango and
Santiago Pati{\~{n}}o{-}Giraldo and
Jack W. Smith and
M. Sriram Iyengar},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Performance Evaluation Clinical Task Ontology(PECTO)},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP26\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Florez-ArangoPS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GeorgeEL16,
author = {Nancy George and
Sara El{-}Gebali and
Thomas Lemberger},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {SourceData: Making Data Discoverable},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP22\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GeorgeEL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GoodBMPSW16,
author = {Benjamin M. Good and
Sebastian Burgstaller{-}Muehlbacher and
Elvira Mitraka and
Timothy Putman and
Andrew I. Su and
Andra Waagmeester},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Opportunities and Challenges Presented by Wikidata in the Context
of Biocuration},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BT105\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GoodBMPSW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GoodPSWBM16,
author = {Benjamin M. Good and
Timothy Putman and
Andrew I. Su and
Andra Waagmeester and
Sebastian Burgstaller{-}Muehlbacher and
Elvira Mitraka},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Opportunities and Challenges Presented by Wikidata in the Context
of Biocuration},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP19\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GoodPSWBM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GourdineMKBH16,
author = {Jean{-}Philippe F. Gourdine and
Thomas O. Metz and
David Koeller and
Matthew H. Brush and
Melissa A. Haendel},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Building a Molecular Glyco-phenotype Ontology to Decipher Undiagnosed
Diseases},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP06\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GourdineMKBH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GriffithsDBHBH16,
author = {Emma J. Griffiths and
Damion M. Dooley and
Pier Luigi Buttigieg and
Robert Hoehndorf and
Fiona S. L. Brinkman and
William W. L. Hsiao},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {FoodON: {A} Global Farm-to-Fork Food Ontology},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP21\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GriffithsDBHBH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HahnRS16,
author = {Thomas Hahn and
Hidayat Ur Rahman and
Richard S. Segall},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Disease Named Entity Recognition Using {NCBI} Corpus},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BP02\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HahnRS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HeQZ16,
author = {Yongqun He and
Zhaohui S. Qin and
Jie Zheng},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {{EGO:} {A} Biomedical Ontology for Integrative Epigenome Representation
and Analysis},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP04\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HeQZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Hicks16,
author = {Amanda Hicks},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {A Realist Representation of Social Identity Data},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT705\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Hicks16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ImaiSKSOKM16,
author = {Takeshi Imai and
Emiko Yamada Shinohara and
Masayuki Kajino and
Ryota Sakurai and
Kazuhiko Ohe and
Kouji Kozaki and
Riichiro Mizoguchi},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {An Ontological Framework for Representing Topological Information
in Human Anatomy},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT506\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ImaiSKSOKM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/JeffryesLB16,
author = {Matt Jeffryes and
Maria Liakata and
Alex Bateman},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Crowdsourcing Protein Family Database Curation},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BT104\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/JeffryesLB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Jensen16,
author = {Lars Juhl Jensen},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {One Tagger, Many Uses: Illustrating the Power of Ontologies in Dictionary-based
Named Entity Recognition},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BIT102\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Jensen16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Jensen16a,
author = {Mark Jensen},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Sustainable Development Goals Interface Ontology},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT202\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Jensen16a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/JonquetTAAKEGMP16,
author = {Cl{\'{e}}ment Jonquet and
Anne Toulet and
Elizabeth Arnaud and
Sophie Aubin and
Esther Dzal{\'{e}} Yeumo Kabor{\'{e}} and
Vincent Emonet and
John Graybeal and
Mark A. Musen and
Cyril Pommier and
Pierre Larmande},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Reusing the {NCBO} BioPortal Technology for Agronomy to Build AgroPortal},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/D202\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/JonquetTAAKEGMP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/JudkinsUB16,
author = {John Judkins and
Joseph Utecht and
Mathias Brochhausen},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Easy Extraction of Terms and Definitions with {OWL2TL}},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/D205\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/JudkinsUB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/KafkasDPM16,
author = {Senay Kafkas and
Ian Dunham and
Helen E. Parkinson and
Johanna R. McEntyre},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Use of Text Mining for Experimental Factor Ontology Coverage Expansion
in the Scope of Target Validation},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BIT106\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/KafkasDPM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Kucuk-McGintyML16,
author = {Hande K{\"{u}}{\c{c}}{\"{u}}k{-}McGinty and
Saurabh Mehta and
Yu Lin and
Nooshin Nabizadeh and
Vasileios Stathias and
Dusica Vidovic and
Amar Koleti and
Christopher Mader and
Jianbin Duan and
Ubbo Visser and
Stephan C. Sch{\"{u}}rer},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Building Concordant Ontologies for Drug Discovery},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT405\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Kucuk-McGintyML16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LaporteVCMMJA16,
author = {Marie{-}Ang{\'{e}}lique Laporte and
L{\'{e}}o Valette and
Laurel Cooper and
Chris Mungall and
Austin Meier and
Pankaj Jaiswal and
Elizabeth Arnaud},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Comparison of Ontology Mapping Techniques to Map Plant Trait Ontologies},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP17\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LaporteVCMMJA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LeverJJ16,
author = {Jake Lever and
Martin Jones and
Steven J. Jones},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {CancerMine: Knowledge Base Construction for Personalised Cancer Treatment},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BT204\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LeverJJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MandaBV16,
author = {Prashanti Manda and
James P. Balhoff and
Todd J. Vision},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Measuring the Importance of Annotation Granularity to the Detection
of Semantic Similarity Between Phenotype Profiles},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT606\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MandaBV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Matis-Mitchell16,
author = {Sherri Matis{-}Mitchell},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Text Mining for Drug Development: Gathering Insights to Support Decision
Making},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BT205\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Matis-Mitchell16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MeierCEJL16,
author = {Austin Meier and
Laurel Cooper and
Justin Elser and
Pankaj Jaiswal and
Marie{-}Ang{\'{e}}lique Laporte},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Annotating Germplasm to Planteome Reference Ontologies},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT407\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MeierCEJL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MejinoBCD16,
author = {Jos{\'{e}} Leonardo Villaraza Mejino Jr. and
James F. Brinkley and
Timothy C. Cox and
Landon Detwiler},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Multi-species Ontologies of the Craniofacial Musculoskeletal System},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP03\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MejinoBCD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MinFW16,
author = {Hua Min and
Robert H. Friedman and
Julie A. Wright},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {An Ontological Representation for the Transtheoretical Theory},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP05\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MinFW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MinTCDWFSKRSWO16,
author = {Hua Min and
Stuart Turner and
Sherri de Coronado and
Brian Davis and
Trish Whetzel and
Robert R. Freimuth and
Harold R. Solbrig and
Richard C. Kiefer and
Michael Riben and
Grace A. Stafford and
Lawrence W. Wright and
Riki Ohira},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Towards a Standard Ontology Metadata Model},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT505\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MinTCDWFSKRSWO16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MuskerLHHSRQT16,
author = {Ruthie Musker and
Matthew Lange and
Allan Hollander and
Patrick Huber and
Nathaniel Springer and
Courtney Riggle and
James Quinn and
Thomas Tomich},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Towards Designing an Ontology Encompassing the Environment-agriculture-food-diet-health
Knowledge Spectrum for Food System Sustainability and Resilience},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP14\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MuskerLHHSRQT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/NealGC16,
author = {Maxwell Lewis Neal and
John H. Gennari and
Daniel L. Cook},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Qualitative Causal Analyses of Biosimulation Models},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT604\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/NealGC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ObeidatFT16,
author = {Rasha Obeidat and
Xiaoli Z. Fern and
Prasad Tadepalli},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Label Embedding Approach for Transfer Learning},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BP03\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ObeidatFT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OchsPEC16,
author = {Christopher Ochs and
Yehoshua Perl and
Gai Elhanan and
James T. Case},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {A Descriptive Delta for Identifying Changes in {SNOMED} {CT}},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT501\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OchsPEC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OngXNLLSCSH16,
author = {Edison Ong and
Jiangan Xie and
Zhaohui Ni and
Qingping Liu and
Yu Lin and
Vasileios Stathias and
Caty Chung and
Stephan C. Sch{\"{u}}rer and
Yongqun He},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {The Cell Line Ontology Integration and Analysis of the Knowledge of
{LINCS} Cell Lines},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP07\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OngXNLLSCSH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OngXZSH16,
author = {Edison Ong and
Zuoshuang Xiang and
Jie Zheng and
Barry Smith and
Yongqun He},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Ontobull and BFOConvert: Web-based Programs to Support Automatic Ontology
Conversion},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/D201\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OngXZSH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Overton16,
author = {James A. Overton},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Humane {OWL:} {RDF} and {OWL} for Humans},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/D203\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Overton16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OzgurHXORH16,
author = {Arzucan {\"{O}}zg{\"{u}}r and
Junguk Hur and
Zuoshuang Xiang and
Edison Ong and
Dragomir R. Radev and
Yongqun He},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Ignet: {A} Centrality and INO-based Web System for Analyzing and Visualizing
Literature-mined Networks},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BP01\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OzgurHXORH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/PerlOCT16,
author = {Yehoshua Perl and
Christopher Ochs and
Sherri de Coronado and
Nicole Thomas},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Visualizing the "Big Picture" of Change in NCIt's Biological Processes},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT502\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/PerlOCT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/PonnaBL16,
author = {Vimala Ponna and
Aaron Baer and
Matthew Lange},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Cardiovascular Health and Physical Activity: {A} Model for Health
Promotion and Decision Support Ontologies},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BIT104\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/PonnaBL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/PreeceEJKFMKXTT16,
author = {Justin Preece and
Justin Elser and
Pankaj Jaiswal and
Kristian Kvilekval and
Dmitry V. Fedorov and
B. S. Manjunath and
Ryan Kitchen and
Xu Xu and
Dmitrios Trigkakis and
Sinisa Todorovic and
Seth Carbon},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Plant Image Segmentation and Annotation with Ontologies in BisQue},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/D101\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/PreeceEJKFMKXTT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/QuDZEJCM16,
author = {Botong Qu and
Jaden Diefenbaugh and
Eugene Zhang and
Justin Elser and
Pankaj Jaiswal and
Seth Carbon and
Christopher J. Mungall},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Planteome Gene Annotation Enrichment Analysis},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP31\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/QuDZEJCM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Raghuvanshi16,
author = {Saurabh Raghuvanshi},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Semantic Digitization of Experimental Data in Biological Sciences},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT703\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Raghuvanshi16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Rodriguez-Garcia16,
author = {Miguel {\'{A}}ngel Rodr{\'{\i}}guez{-}Garc{\'{\i}}a and
Luke T. Slater and
Imane Boudellioua and
Paul N. Schofield and
Georgios V. Gkoutos and
Robert Hoehndorf},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Updates to the AberOWL Ontology Repository},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/D104\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Rodriguez-Garcia16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/RossNACHLRWVW16,
author = {Karen E. Ross and
Darren A. Natale and
Cecilia N. Arighi and
Sheng{-}Chih Chen and
Hongzhan Huang and
Gang Li and
Jia Ren and
Michael Wang and
K. Vijay{-}Shanker and
Cathy H. Wu},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Scalable Text Mining Assisted Curation of {PTM} Proteoforms in the
Protein Ontology},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BIT103\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/RossNACHLRWVW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SchlegelSE16,
author = {Daniel R. Schlegel and
Selja Sepp{\"{a}}l{\"{a}} and
Peter L. Elkin},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Definition Coverage in the {OBO} Foundry Ontologies: The Big Picture},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP16\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SchlegelSE16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SlaterGSH16,
author = {Luke T. Slater and
Georgios V. Gkoutos and
Paul N. Schofield and
Robert Hoehndorf},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {To {MIREOT} or not to MIREOT? {A} Case Study of the Impact of Using
{MIREOT} in the Experimental Factor Ontology {(EFO)}},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT702\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SlaterGSH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SlykeBP16,
author = {Ceri E. Van Slyke and
Yvonne M. Bradford and
Christian Pich},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Growth of the Zebrafish Anatomy Ontology: Expanded to Support Adult
Morphology and Dynamic Changes in the Early Embryo},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP20\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SlykeBP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SmithJ16,
author = {Barry Smith and
Mark Jensen},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {The {UNEP} Ontologies and the {OBO} Foundry},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT206\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SmithJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SouzaA16,
author = {Amanda Damasceno de Souza and
Mauricio Barcellos Almeida},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Natural Language Definitions for the Leukemia Knowledge Domain},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT507\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SouzaA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SpyrouL16,
author = {Constantine Spyrou and
Matthew Lange},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {uc{\_}FIDO: Unambiguous Characterization of Food Interactions with
Drugs Ontology},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP28\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SpyrouL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/TajiL16,
author = {Kimiya Taji and
Matthew Lange},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {uc{\_}Eating: Ontology for Unambiguous Characterization of Eating
and Food Habits},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP13\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/TajiL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Toyoshima16,
author = {Fumiaki Toyoshima},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Towards an Ontology of Schizophrenia},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP23\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Toyoshima16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/UtechtJBCORRAHB16,
author = {Joseph Utecht and
John Judkins and
Mathias Brochhausen and
Terra Colvin Jr. and
J. Neil Otte and
Nicholas Rogers and
Robert Rose and
Maria Alvi and
Amanda Hicks and
Jane Ball and
Stephen M. Bowman and
Robert T. Maxson and
Rosemary Nabaweesi and
Rohit Pradhan and
Nels D. Sanddal and
M. Eduard Tudoreanu and
Robert J. Winchell},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {{OOSTT:} a Resource for Analyzing the Organizational Structures of
Trauma Centers and Trauma Systems},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT504\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/UtechtJBCORRAHB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/VasilevskyEFMR016,
author = {Nicole A. Vasilevsky and
Mark Engelstad and
Erin Foster and
Chris Mungall and
Peter N. Robinson and
Sebastian K{\"{o}}hler and
Melissa A. Haendel},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Enhancing the Human Phenotype Ontology for Use by the Layperson},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT402\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/VasilevskyEFMR016.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Walls16,
author = {Ramona L. Walls},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Defining and Sustaining Populations and Communities},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT203\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Walls16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WangGA16,
author = {Lucy Lu Wang and
John H. Gennari and
Neil F. Abernethy},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {An Analysis of Differences in Biological Pathway Resources},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT401\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WangGA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WeiLL16,
author = {Chih{-}Hsuan Wei and
Robert Leaman and
Zhiyong Lu},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Large-scale Semantic Indexing with Biomedical Ontologies},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BIT101-D204\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WeiLL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WhiteBECZHGTE16,
author = {Marijane White and
Matthew H. Brush and
Shahim Essaid and
Robin Champieux and
Adrienne Zell and
Melissa A. Haendel and
Colin Grove and
Syeda Momina Tabish and
David Eichmann},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Enhancing SciENcv through Semantic Research Profile Integration with
the {VIVO-ISF} Ontology},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP32\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WhiteBECZHGTE16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/XuGJTL16,
author = {Weijia Xu and
Amit Gupta and
Pankaj Jaiswal and
Crispin Taylor and
Patti Lockhart},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Enhancing Information Accessibility of Publications with Text Mining
and Ontology},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/D106-BP04\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/XuGJTL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/XuGJTL16a,
author = {Weijia Xu and
Amit Gupta and
Pankaj Jaiswal and
Crispin Taylor and
Patti Lockhart},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {A Web Application for Extracting Key Domain Information for Scientific
Publications Using Ontology},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/BIT105\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/XuGJTL16a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/YumakCHZPE16,
author = {Hasan Yumak and
Ling Chen and
Michael Halper and
Ling Zheng and
Yehoshua Perl and
Gai Elhanan},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {A Quality-Assurance Study of ChEBI},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT701\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/YumakCHZPE16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ZhengCBRSJAGDSC16,
author = {Jie Zheng and
Jashon Cade and
Brian P. Brunk and
David S. Roos and
Christian J. Stoeckert Jr. and
San James and
Emmanuel Arinaitwe and
Bryan Greenhouse and
Grant Dorsey and
Steven Sullivan and
Jane M. Carlton and
Gabriel Carrasco{-}Escobar and
Dionicia Gamboa and
Paula Maguina{-}Mercedes and
Joseph Vinetz},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Malaria Study Data Integration and Information Retrieval Based on
{OBO} Foundry Ontologies},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IT503\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ZhengCBRSJAGDSC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ZhengPGE16,
author = {Ling Zheng and
Yehoshua Perl and
James Geller and
Gai Elhanan},
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {How to Summarize Big Knowledge Subjects},
booktitle = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747/IP09\_ICBO2016.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ZhengPGE16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icbo/2016,
editor = {Pankaj Jaiswal and
Robert Hoehndorf and
Cecilia N. Arighi and
Austin Meier},
title = {Proceedings of the Joint International Conference on Biological Ontology
and BioCreative, Corvallis, Oregon, United States, August 1-4, 2016},
series = {{CEUR} Workshop Proceedings},
volume = {1747},
publisher = {CEUR-WS.org},
year = {2016},
url = {https://ceur-ws.org/Vol-1747},
urn = {urn:nbn:de:0074-1747-1},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/2016.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AlobaidGPPC15,
author = {Ahmad Alobaid and
Daniel Garijo and
Mar{\'{\i}}a Poveda{-}Villal{\'{o}}n and
Idafen Santana{-}P{\'{e}}rez and
{\'{O}}scar Corcho},
editor = {Francisco M. Couto and
Janna Hastings},
title = {OnToology, a tool for collaborative development of ontologies},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/demo3.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:24 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AlobaidGPPC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BartonDB15,
author = {Adrien Barton and
R{\'{e}}gis Duvauferrier and
Anita Burgun},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Formalization of indicators of diagnostic performance in a realist
ontology},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/regular5.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BartonDB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BoekerFBS15,
author = {Martin Boeker and
F{\'{a}}bio Fran{\c{c}}a and
Peter Bronsert and
Stefan Schulz},
editor = {Francisco M. Couto and
Janna Hastings},
title = {{TNM-O} an ontology for the Tumor-Node-Metastasis classification of
malignant tumors: a study on rectal cancer},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/regular1.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BoekerFBS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BonaC15,
author = {Jonathan P. Bona and
Werner Ceusters},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Replacing {EHR} structured data with explicit representations},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/early2.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BonaC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BonaKR15,
author = {Jonathan P. Bona and
Gunther Kohn and
Alan Ruttenberg},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Ontology-driven patient history questionnaires},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/early5.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BonaKR15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BukhariNKCB15,
author = {Ahmad C. Bukhari and
Mate Levente Nagy and
Michael Krauthammer and
Paolo Ciccarese and
Christopher J. O. Baker},
editor = {Francisco M. Couto and
Janna Hastings},
title = {{BIM:} an open ontology for the annotation of biomedical images},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/regular8.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BukhariNKCB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BurekLH15,
author = {Patryk Burek and
Frank Loebe and
Heinrich Herre},
editor = {Francisco M. Couto and
Janna Hastings},
title = {A {UML} profile for functional modeling applied to the Molecular Function
Ontology},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/regular3.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BurekLH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CeustersH15,
author = {Werner Ceusters and
William R. Hogan},
editor = {Francisco M. Couto and
Janna Hastings},
title = {An ontological analysis of diagnostic assertions in electronic healthcare
records},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/regular2.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CeustersH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CheethamGGHS15,
author = {Edward Cheetham and
Yongsheng Gao and
Bruce Goldberg and
Robert R. Hausam and
Stefan Schulz},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Formal representation of disorder associations in {SNOMED} {CT}},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/regular6.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CheethamGGHS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CostaOMB15,
author = {Marta Costa and
David Osumi{-}Sutherland and
Steven J. Marygold and
Nick Brown},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Improvements to the Drosophila anatomy ontology},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/poster2.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CostaOMB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FergersonADGSSV15,
author = {Ray W. Fergerson and
Paul R. Alexander and
Michael Dorf and
Rafael S. Gon{\c{c}}alves and
Manuel Salvadores and
Alex Skrenchuk and
Jennifer Vendetti and
Mark A. Musen},
editor = {Francisco M. Couto and
Janna Hastings},
title = {{NCBO} BioPortal version 4},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/demo8.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FergersonADGSSV15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GiraldoGC15,
author = {Olga L. Giraldo and
Alexander Garc{\'{\i}}a Castro and
{\'{O}}scar Corcho},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Using Semantics and {NLP} in the {SMART} Protocols Repository},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/poster6.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GiraldoGC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GoncalvesNTM15,
author = {Rafael S. Gon{\c{c}}alves and
Csongor I. Nyulas and
Samson W. Tu and
Mark A. Musen},
editor = {Francisco M. Couto and
Janna Hastings},
title = {OWL-based form generation and structured data acquisition},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/demo9.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GoncalvesNTM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GoncalvesTNTM15,
author = {Rafael S. Gon{\c{c}}alves and
Samson W. Tu and
Csongor I. Nyulas and
Michael J. Tierney and
Mark A. Musen},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Structured data acquisition with ontology-based web forms},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/regular14.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GoncalvesTNTM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HastingsSMKDOTM15,
author = {Janna Hastings and
Neil Swainston and
Venkatesh Muthukrishnan and
Namrata Kale and
Adriano Dekker and
Gareth I. Owen and
Steve Turner and
Pedro Mendes and
Christoph Steinbeck},
editor = {Francisco M. Couto and
Janna Hastings},
title = {ChEBI for systems biology and metabolic modelling},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/poster7.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HastingsSMKDOTM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HeJ15,
author = {Yongqun He and
Guoqian Jiang},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Bridging Vaccine Ontology and NCIt vaccine domain for cancer vaccine
data integration and analysis},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/poster4.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HeJ15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HeZL15,
author = {Yongqun He and
Jie Zheng and
Yu Lin},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Ontoanimal tools for reusing ontologies, generating and editing ontology
terms, and dereferencing ontology terms},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/poster3.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HeZL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HeZL15a,
author = {Yongqun He and
Jie Zheng and
Yu Lin},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Ontorat: Automatic generation and editing of ontology terms},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/demo2.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HeZL15a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/KamdarTM15,
author = {Maulik R. Kamdar and
Tania Tudorache and
Mark A. Musen},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Investigating term reuse and overlap in biomedical ontologies},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/regular9.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/KamdarTM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/KozakiYMIO15,
author = {Kouji Kozaki and
Yuki Yamagata and
Riichiro Mizoguchi and
Takeshi Imai and
Kazuhiko Ohe},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Disease Compass - a navigation system for disease knowledge based
on ontology and linked data techniques},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/regular16.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/KozakiYMIO15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/KrebsWSMGONSMG15,
author = {Olga Krebs and
Katy Wolstencroft and
Natalie J. Stanford and
Norman Morrison and
Martin Golebiewski and
Stuart Owen and
Quyen Nguyen and
Jacky L. Snoep and
Wolfgang M{\"{u}}ller and
Carole A. Goble},
editor = {Francisco M. Couto and
Janna Hastings},
title = {{FAIRDOM} approach for semantic interoperability of systems biology
data and models},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/poster13.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/KrebsWSMGONSMG15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LamuriasPCC15,
author = {Andre Lamurias and
Vasco Pedro and
Luka A. Clarke and
Francisco M. Couto},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Annotating biomedical ontology terms in electronic health records
using crowd-sourcing},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/early1.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LamuriasPCC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Lopez-GarciaS15,
author = {Pablo L{\'{o}}pez{-}Garc{\'{\i}}a and
Stefan Schulz},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Can {SNOMED} {CT} be squeezed without losing its shape?},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/regular7.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Lopez-GarciaS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LordW15,
author = {Phillip Lord and
Jennifer D. Warrender},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Highly literate ontologies},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/demo7.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LordW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MartinsFP15,
author = {Catarina Martins and
Daniel Faria and
Catia Pesquita},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Visualization and editing of biomedical ontology alignments in AgreementMakerLight},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/poster10.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MartinsFP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MartinsJSP15,
author = {Catarina Martins and
Ernesto Jim{\'{e}}nez{-}Ruiz and
Emanuel Santos and
Catia Pesquita},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Towards visualizing the mapping incoherences in Bioportal},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/early4.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MartinsJSP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MitrakaS15,
author = {Elvira Mitraka and
Lynn M. Schriml},
editor = {Francisco M. Couto and
Janna Hastings},
title = {2015 Disease Ontology update: DO's expanded curation activities to
connect disease-related data},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/poster5.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MitrakaS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/NafissiFU15,
author = {Anahita Nafissi and
Fabio Fiorani and
Bj{\"{o}}rn Usadel},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Mapping a database schema to the structure of an existing ontology},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/poster14.pdf},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/NafissiFU15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/NyulasTTM15,
author = {Csongor I. Nyulas and
Samson W. Tu and
Tania Tudorache and
Mark A. Musen},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Modeling and tools for supporting post-coordination in {ICD-11}},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/poster12.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/NyulasTTM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OliveiraP15,
author = {Daniela Oliveira and
Catia Pesquita},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Compound matching of biomedical ontologies},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/early3.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OliveiraP15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OliveiraP15a,
author = {Daniela Oliveira and
Catia Pesquita},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Inferring logical definitions using compound ontology matching},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/poster11.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OliveiraP15a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OngH15,
author = {Edison Ong and
Yongqun He},
editor = {Francisco M. Couto and
Janna Hastings},
title = {GOfox: Semantics-based simplified hierarchical classification and
interactive visualization to support {GO} enrichment analysis},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/demo1.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OngH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Overton15,
author = {James A. Overton},
editor = {Francisco M. Couto and
Janna Hastings},
title = {{EDN-LD:} {A} simple linked data tool},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/demo5.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Overton15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OvertonDEOM15,
author = {James A. Overton and
Heiko Dietze and
Shahim Essaid and
David Osumi{-}Sutherland and
Christopher J. Mungall},
editor = {Francisco M. Couto and
Janna Hastings},
title = {{ROBOT:} {A} command-line tool for ontology development},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/demo6.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OvertonDEOM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/PanovSD15,
author = {Pance Panov and
Larisa N. Soldatova and
Saso Dzeroski},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Representing bioinformatics datatypes using the OntoDT ontology},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/poster9.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/PanovSD15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Quesada-Martinez15,
author = {Manuel Quesada{-}Mart{\'{\i}}nez and
Astrid Duque{-}Ramos and
Jesualdo Tom{\'{a}}s Fern{\'{a}}ndez{-}Breis},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Analysis of the evolution of ontologies using OQuaRE: application
to {EDAM}},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/regular13.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Quesada-Martinez15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Seppala15,
author = {Selja Sepp{\"{a}}l{\"{a}}},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Mapping WordNet to the Basic Formal Ontology using the {KYOTO} ontology},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/poster8.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Seppala15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SilvaCS15,
author = {M{\'{a}}rio J. Silva and
Tiago Chaves and
B{\'{a}}rbara Sim{\~{o}}es},
editor = {Francisco M. Couto and
Janna Hastings},
title = {An ontology-based approach for {SNOMED} {CT} translation},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/regular4.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SilvaCS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SlaterGSH15,
author = {Luke T. Slater and
Georgios V. Gkoutos and
Paul N. Schofield and
Robert Hoehndorf},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Using Aber-OWL for fast and scalable reasoning over BioPortal ontologies},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/regular15.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SlaterGSH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SlaterGSH15a,
author = {Luke T. Slater and
Georgios V. Gkoutos and
Paul N. Schofield and
Robert Hoehndorf},
editor = {Francisco M. Couto and
Janna Hastings},
title = {AberOWL: an ontology portal with {OWL} {EL} reasoning},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/demo4.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SlaterGSH15a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SmithC15,
author = {Barry Smith and
Werner Ceusters},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Aboutness: towards foundations for the Information Artifact Ontology},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/regular10.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SmithC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SmithCC15,
author = {William Smith and
Alan R. Chappell and
Courtney D. Corley},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Medical and transmission vector vocabulary alignment with Schema.org},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/regular11.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SmithCC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WangC15,
author = {Lucy Lu Wang and
Yong Choi},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Development of a discharge ontology to support postanesthesia discharge
decision making},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/poster1.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WangC15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WarrenderL15,
author = {Jennifer D. Warrender and
Phillip Lord},
editor = {Francisco M. Couto and
Janna Hastings},
title = {Scaffolding the mitochondrial Disease Ontology from extant knowledge
sources},
booktitle = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515/regular12.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WarrenderL15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icbo/2014,
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1327},
urn = {urn:nbn:de:0074-1327-1},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/2014.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icbo/2015,
editor = {Francisco M. Couto and
Janna Hastings},
title = {Proceedings of the International Conference on Biomedical Ontology,
{ICBO} 2015, Lisbon, Portugal, July 27-30, 2015},
series = {{CEUR} Workshop Proceedings},
volume = {1515},
publisher = {CEUR-WS.org},
year = {2015},
url = {https://ceur-ws.org/Vol-1515},
urn = {urn:nbn:de:0074-1515-7},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/2015.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AmithT14,
author = {Muhammad Amith and
Cui Tao},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {An Initial Framework for an Ontology-based Mobile Application for
Vaccine Information Retrieval and Education},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {81--83},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_53.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:24 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AmithT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BodenreiderPN14,
author = {Olivier Bodenreider and
Lee B. Peters and
Thang Nguyen},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {RxClass - Navigating between Drug Classes and RxNorm Drugs},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {106--107},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_49.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BodenreiderPN14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BonaRR14,
author = {Jonathan P. Bona and
Alan Ruttenberg and
Jenny Rouleau},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Representing Modification Sites in {PRO}},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {60--63},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_46.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BonaRR14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BrochhausenHLBM14,
author = {Mathias Brochhausen and
William R. Hogan and
John D. Levander and
Shawn T. Brown and
Nicholas Millett and
Josh Hanna and
Michael M. Wagner},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {A Novel Representation of Terms Related to Infectious Disease Epidemiology
for Epidemic Modeling: The Apollo Structured Vocabulary and Pre-existing
Representations},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {21--26},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_30.pdf},
timestamp = {Thu, 11 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icbo/BrochhausenHLBM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Ceusters14,
author = {Werner Ceusters},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Pain Assessment Terminology in the {NCBO} BioPortal: Evaluation and
Recommendations},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {1--6},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/preface.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Ceusters14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CeustersHS14,
author = {Werner Ceusters and
Chiun Yu Hsu and
Barry Smith},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Clinical Data Wrangling using Ontological Realism and Referent Tracking},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {27--32},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_29.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CeustersHS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ChenZCTSXBZJHBM14,
author = {Guocai Chen and
Jieyi Zhao and
Trevor Cohen and
Cui Tao and
Jingchun Sun and
Hua Xu and
Elmer V. Bernstam and
Jia Zeng and
Amber M. Johnson and
Vijaykumar Holla and
Ann Balley and
Funda Meric{-}Bernstam and
W. Jim Zheng},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Using Ontology Fingerprints to Disambiguate Gene Name Entities in
the Biomedical Literature},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {66},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_22.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ChenZCTSXBZJHBM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/DearryLBHM14,
author = {Allen Dearry and
Cindy Lawler and
Rebecca Boyles and
Astrid Haugen and
Huerta Michael},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Making Biomedical Data Usable: {NIH} Community-Based Data and Metadata
Standards Efforts},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {73},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_70.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/DearryLBHM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GambleFC14,
author = {Bryan Gamble and
Samah J. Fodeh and
Kei Cheung},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Post-Traumatic Stress Disorder {(PTSD)} Ontology and Use Case},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {56--59},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_42.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GambleFC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GoldfainSC14,
author = {Albert Goldfain and
Barry Smith and
Lindsay G. Cowell},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Ontological Representation of {CDC} Active Bacterial Core Surveillance
Case Reports},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {74--77},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_51.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GoldfainSC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GroveE14,
author = {Michael Grove and
Jeff Emch},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {An Ontologic Approach to Leverage Surgical Training Data Development
and Application of a CranioMaxilloFacial Ontology},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {104--105},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_37.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GroveE14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HeLZ14,
author = {Yongqun He and
Yue Liu and
Bin Zhao},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {{OGG:} a Biological Ontology for Representing Genes and Genomes in
Specific Organisms},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {13--20},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_23.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HeLZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/JensenCBDRD14,
author = {Mark Jensen and
Alexander P. Cox and
Jonathan P. Bona and
William D. Duncan and
Patrick L. Ray and
Alexander D. Diehl},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Applications of {OBI} 'assay'},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {96--98},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_59.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/JensenCBDRD14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/JensenCRTWRD14,
author = {Mark Jensen and
Alexander P. Cox and
Patrick Ray and
Barbara E. Teter and
Bianca Weinstock{-}Guttman and
Alan Ruttenberg and
Alexander D. Diehl},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {An Ontological Representation and Analysis of Patient-reported and
Clinical Outcomes for Multiple Sclerosis},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {52--55},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_44.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/JensenCRTWRD14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/JiangSCUC14,
author = {Guoqian Jiang and
Harold R. Solbrig and
Can Celik and
Bedirhan {\"{U}}st{\"{u}}n and
Christopher G. Chute},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Profiling {ICD-11} Terminological Content Using the Common Terminology
Services 2 {(CTS2)} Standard},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_18.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/JiangSCUC14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LiangG14,
author = {Chen Liang and
Yang Gong},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Developing a Patient Safety Ontology for Knowledge Management, Data
Integration, and Decision Making},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {70--72},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_48.pdf},
timestamp = {Thu, 07 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icbo/LiangG14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LinHMEZSKH14,
author = {Yu Lin and
Marcelline R. Harris and
Frank J. Manion and
Elizabeth Eisenhauer and
Bin Zhao and
Wei Shi and
Alla Karnovsky and
Yongqun He},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Development of a BFO-Based Informed Consent Ontology {(ICO)}},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {84--86},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_54.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LinHMEZSKH14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MadaniASX14,
author = {Sina Madani and
Reza Alemy and
Dean F. Sittig and
Hua Xu},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Quality of Care Metric Reporting from Clinical Narratives: Assessing
Ontology Components},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {47--51},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_38.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MadaniASX14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/McCuskerYSECDDM14,
author = {Jamie P. McCusker and
Rui Yan and
Kusum Solanki and
John S. Erickson and
Cynthia Chang and
Michel Dumontier and
Jonathan S. Dordick and
Deborah L. McGuinness},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {A Nanopublication Framework for Biological Networks using Cytoscape.js},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {90--92},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_57.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/McCuskerYSECDDM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/NorenKHLBNSQ14,
author = {David Noren and
Steven M. Kornblau and
Chenyue W. Hu and
Byron Long and
Alex Bisberg and
Raquel Norel and
Gustavo Stolovitzky and
Amina A. Qutub},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {{DREAM} 9: An Acute Myeloid Leukemia Prediction Big Data Challenge},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {108--109},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_55.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/NorenKHLBNSQ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/RayCJD14,
author = {Patrick Ray and
Alexander P. Cox and
Mark Jensen and
Alexander D. Diehl},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {The Ontological Treatment of Sight and Blindness},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {39--42},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_43.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/RayCJD14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/RichessonFB14,
author = {Rachel L. Richesson and
Kin Wah Fung and
Olivier Bodenreider},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Coverage of Rare Disease Names in Clinical Coding Systems and Ontologies
and Implications for Electronic Health Records-Based Research},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {78--80},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_52.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/RichessonFB14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Rocca-SerraWPGZ14,
author = {Philippe Rocca{-}Serra and
Ramona L. Walls and
Jacob Parnell and
Rachel Gallery and
Jie Zheng and
Susanna{-}Assunta Sansone and
Alejandra N. Gonz{\'{a}}lez{-}Beltr{\'{a}}n},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Modeling a Microbial Community and Biodiversity Assay with {OBI} and
{PCO} {OBO} Foundry Ontologies: the Interoperability Gains of a Modular
Approach},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {64},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_20.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Rocca-SerraWPGZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/RossTLDCCANW14,
author = {Karen Ross and
Catalina O. Tudor and
Gang Li and
Ruoyao Ding and
Irem {\c{C}}elen and
Julie Cowart and
Cecilia N. Arighi and
Darren A. Natale and
Cathy H. Wu},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Knowledge Representation of Protein PTMs and Complexes in the Protein
Ontology: Application to Multi-Faceted Disease Analysis},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {43--46},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_32.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/RossTLDCCANW14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SantamariaAS14,
author = {Suzanne L. Santamaria and
Farzaneh Ashrafi and
Kent A. Spackman},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Linking {LOINC} and {SNOMED} {CT:} {A} Cooperative Approach to Enhance
Each Terminology and Facilitate Co-usage},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {99--101},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_60.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SantamariaAS14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/TaoSZCX14,
author = {Cui Tao and
Jingchun Sun and
W. Jim Zheng and
Junjie Chen and
Hua Xu},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Drug Target Prediction for Colorectal Cancer by Combining Ontology
and Network Approaches},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {67},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_15.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/TaoSZCX14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Whetzel14,
author = {Trish Whetzel},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {SciCrunch: {A} Cooperative and Collaborative Data and Resource Discovery
Platform for Scientific Communities},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {102--103},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_36.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Whetzel14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/XiangLH14,
author = {Zuoshuang Xiang and
Yu Lin and
Yongqun He},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Ontobat: An Ontology-based Semantic Web Approach for Linked Data Processing
and Analysis},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {93--95},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_58.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/XiangLH14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/YamagataKIOM14,
author = {Yuki Yamagata and
Kouji Kozaki and
Takeshi Imai and
Kazuhiko Ohe and
Riichiro Mizoguchi},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Towards the Integration of Abnormality in Diseases},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {7--12},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_14.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/YamagataKIOM14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ZhangWTX14,
author = {Yaoyun Zhang and
Jingqi Wang and
Cui Tao and
Hua Xu},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Ontology-based Normalization for Disease-Lab test Relation Extraction},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {87--89},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_56.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ZhangWTX14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ZhengHMLHSH14,
author = {Jie Zheng and
Marcelline R. Harris and
Anna Maria Masci and
Yu Lin and
Alfred O. Hero III and
Barry Smith and
Yongqun He},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {{OBCS:} The Ontology of Biological and Clinical Statistics},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {65},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_21.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ZhengHMLHSH14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ZhuT14,
author = {Qian Zhu and
Cui Tao},
editor = {William R. Hogan and
Sivaram Arabandi and
Mathias Brochhausen},
title = {Pharmacological Class Data Representation in the Web Ontology Language
{(OWL)}},
booktitle = {Proceedings of the 5th International Conference on Biomedical Ontology,
{ICBO} 2014, Houston, Texas, USA, October 8-9, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1327},
pages = {68--69},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1327/icbo2014\_paper\_35.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ZhuT14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AdamusiakSTS13,
author = {Tomasz Adamusiak and
Naoki Shimoyama and
Marek Tutaj and
Mary Shimoyama},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Next generation ontology browser},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {132--133},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_55.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:24 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AdamusiakSTS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BrushMWH13,
author = {Matthew H. Brush and
Chris Mungall and
Nicole L. Washington and
Melissa A. Haendel},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {What's in a Genotype?: An Ontological Characterization for Integration
of Genetic Variation Data},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {105--108},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_60.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BrushMWH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BrushZHSPDSH13,
author = {Matthew H. Brush and
Jie Zheng and
Yongqun He and
Sirarat Sarntivijai and
Bjoern Peters and
Alexander D. Diehl and
Christian J. Stoeckert Jr. and
Melissa A. Haendel},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Alignment of Cultured Cell Modeling Across {OBO} Foundry Ontologies:
Key Outcomes, Insights},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {120},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_68.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BrushZHSPDSH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CallahanD13,
author = {Alison Callahan and
Michel Dumontier},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {HyQue: {A} Semantic Web tool for evaluating scientific hypotheses},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {123},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_73.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CallahanD13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ChengHTBH13,
author = {Cheng Chen and
Josh Hanna and
John R. Talburt and
Mathias Brochhausen and
William R. Hogan},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {A Demonstration of Entity Identity Information Management Applied
to Demographic Data in a Referent Tracking System},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {136--137},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_61.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ChengHTBH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ChepelevD13,
author = {Leonid L. Chepelev and
Michel Dumontier},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {The Web as a Distributed Biochemical Reactor: Semantically Enabled
Metabolic Fate Prediction},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {113--116},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_65.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ChepelevD13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CourtotZSBR13,
author = {M{\'{e}}lanie Courtot and
Jie Zheng and
Christian J. Stoeckert Jr. and
Ryan Remy Brinkman and
Alan Ruttenberg},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Diagnostic criteria and clinical guidelines standardization to automate
case classification},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {101--104},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_57.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CourtotZSBR13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CoxJRSD13,
author = {Alexander P. Cox and
Mark Jensen and
Alan Ruttenberg and
Kinga Szigeti and
Alexander D. Diehl},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Measuring Cognitive Functions: Hurdles in the Development of the NeuroPsychological
Testing Ontology},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {78--83},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_46.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CoxJRSD13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CrosetOR13,
author = {Samuel Croset and
John P. Overington and
Dietrich Rebholz{-}Schuhmann},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Brain, Biomedical Knowledge Manipulation},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {125},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_71.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CrosetOR13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CrosetOR13a,
author = {Samuel Croset and
John P. Overington and
Dietrich Rebholz{-}Schuhmann},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {The Functional Therapeutic Chemical Classification System},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {125},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_72.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CrosetOR13a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/DuncanSR13,
author = {William D. Duncan and
Titus Schleyer and
Alan Ruttenberg},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Representing Intracoronal Tooth Restorations in the Ontology for Oral
Health and Disease},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {109--112},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_63.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/DuncanSR13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/EilbeckJMVS13,
author = {Karen Eilbeck and
Jason R. Jacobs and
Sunanda R. McGarvey and
Cynthia Vinion and
Catherine J. Staes},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Exploring the use of ontologies and automated reasoning to manage
selection of reportable condition lab tests from {LOINC}},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {12--15},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_35.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/EilbeckJMVS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/EssaidTH13,
author = {Shahim Essaid and
Carlo Torniai and
Melissa A. Haendel},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Enabling semantic search in a bio-specimen repository},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {50--53},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_48.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/EssaidTH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GoldfainXBS13,
author = {Albert Goldfain and
Min Xu and
Jonathan P. Bona and
Barry Smith},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Ontology Based Annotation of Contextualized Vital Signs},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {28--33},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_18.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GoldfainXBS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HaendelTVHB13,
author = {Melissa A. Haendel and
Carlo Torniai and
Nicole A. Vasilevsky and
Scott Hoffmann and
Daniela Bourges{-}Waldegg},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {eagle-i: ontology-driven federated search and data entry tools for
discovering biomedical research resources},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {130--131},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_54.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HaendelTVHB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HoganHJB13,
author = {William R. Hogan and
Josh Hanna and
Eric Joseph and
Mathias Brochhausen},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Towards a Consistent and Scientifically Accurate Drug Ontology},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {68--73},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_40.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HoganHJB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HorridgeMTVNMN13,
author = {Matthew Horridge and
Jonathan Mortensen and
Tania Tudorache and
Jennifer Vendetti and
Csongor Nyulas and
Mark A. Musen and
Natalya Fridman Noy},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Introducing WebProt{\'{e}}g{\'{e}} 2 as a Collaborative
Platform for Editing Biomedical Ontologies},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {138--139},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_66.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HorridgeMTVNMN13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/JensenCSD13,
author = {Mark Jensen and
Alexander P. Cox and
Barry Smith and
Alexander D. Diehl},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Representing Disease Courses: An Application of the Neurological Disease
Ontology to Multiple Sclerosis Typology},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {121},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_69.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/JensenCSD13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/KocbekKPW13,
author = {Simon Kocbek and
Jin{-}Dong Kim and
Jean{-}Luc Perret and
Patricia L. Whetzel},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Visualizing ontology mappings to help ontology engineers identify
relevant ontologies for their reuse},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {34--39},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_49.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/KocbekKPW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Martinez-CostaS13,
author = {Catalina Mart{\'{\i}}nez{-}Costa and
Stefan Schulz},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Ontology-based reinterpretation of the {SNOMED} {CT} context model},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {90--95},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_38.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Martinez-CostaS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MejinoTCSB13,
author = {Jos{\'{e}} L. V. Mejino Jr. and
Ravensara S. Travillian and
Timothy C. Cox and
Linda G. Shapiro and
James F. Brinkley},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Human Development Domain of the Ontology of Craniofacial Development
and Malformation},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {74--77},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_41.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MejinoTCSB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MortensenAMN13,
author = {Jonathan Mortensen and
Paul R. Alexander and
Mark A. Musen and
Natalya Fridman Noy},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Crowdsourcing Ontology Verification},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {40--45},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_51.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MortensenAMN13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/NealCG13,
author = {Maxwell Lewis Neal and
Daniel L. Cook and
John H. Gennari},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {An {OWL} knowledge base for classifying and querying collections of
physiological models: {A} prototype human physiome},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {16--21},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_19.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/NealCG13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/NikolicSADSNMS13,
author = {Snezana Nikolic and
Prabhu Shankar and
Sivaram Arabandi and
Akshaye Dhawan and
Rajshekhar Sunderraman and
Shamkant B. Navathe and
Kunal Malhotra and
Rani H. Singh},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {{ONSTR:} The Ontology for Newborn Screening Follow-up and Translational
Research},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {54--61},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_47.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/NikolicSADSNMS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OberkampfZBH13,
author = {Heiner Oberkampf and
Sonja Zillner and
Bernhard Bauer and
Matthias Hammon},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {An OGMS-based Model for Clinical Information {(MCI)}},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {97--100},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_56.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OberkampfZBH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Ochs0PAHG13,
author = {Christopher Ochs and
Zhe He and
Yehoshua Perl and
Sivaram Arabandi and
Michael Halper and
James Geller},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Choosing the Granularity of Abstraction Networks for Orientation and
Quality Assurance of the Sleep Domain Ontology},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {84--89},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_23.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Ochs0PAHG13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OchsPG13,
author = {Christopher Ochs and
Yehoshua Perl and
James Geller},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {{BLUSNO:} {A} System for Orientation, Visualization, and Quality Assurance
of {SNOMED} {CT} Using Abstraction Networks},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {128--129},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_22.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OchsPG13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OvertonVGDSP13,
author = {James A. Overton and
Randi Vita and
Jason Greenbaum and
Heiko Dietze and
Alessandro Sette and
Bjoern Peters},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {A Taxonomy for Immunologists},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {124},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_76.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OvertonVGDSP13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/RasmussenD13,
author = {Karen E. Rasmussen and
Mary E. Dolan},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {OncoCL: {A} Cancer Cell Ontology},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {126},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_75.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/RasmussenD13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/RayD13,
author = {Patrick Ray and
Alexander D. Diehl},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {The Ocular Disease Ontology},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {119},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_67.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/RayD13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SchwarzSKSS13,
author = {Ulf Schwarz and
Holger Stenzhorn and
Nikolina Koleva and
Luc Schneider and
Emilio M. Sanfilippo},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {A method for semi-automatic extension of a middle-layer ontology},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {134--135},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_58.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SchwarzSKSS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Shaban-NejadJLIMOB13,
author = {Arash Shaban{-}Nejad and
Christian Jauvin and
Maxime Lavigne and
Masoumeh T. Izadi and
Luke Mondor and
Anya Okhmatovskaia and
David L. Buckeridge},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {PopHR: An Integrated Semantic Framework for Population Health Surveillance},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {118},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_64.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Shaban-NejadJLIMOB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/TorniaiELCH13,
author = {Carlo Torniai and
Shahim Essaid and
Brian Lowe and
Jon Corson{-}Rikert and
Melissa A. Haendel},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Finding common ground: integrating the eagle-i and {VIVO} ontologies},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {46--49},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_20.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/TorniaiELCH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/XiangH13,
author = {Zuoshuang Xiang and
Yongqun He},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {{HINO:} BFO-aligned ontology representation of human molecular interactions
and pathways},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {122},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_70.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/XiangH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/YamagataKKMIO13,
author = {Yuki Yamagata and
Hiroko Kou and
Kouji Kozaki and
Riichiro Mizoguchi and
Takeshi Imai and
Kazuhiko Ohe},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Ontological Model of Abnormal States and its Application in the Medical
Domain},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {22--27},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_11.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/YamagataKKMIO13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ZhengMS13,
author = {Jie Zheng and
Elisabetta Manduchi and
Christian J. Stoeckert Jr.},
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Development of an Application Ontology for Beta Cell Genomics Based
On the Ontology for Biomedical Investigations},
booktitle = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
pages = {62--67},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060/icbo2013\_submission\_31.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ZhengMS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icbo/2013,
editor = {Michel Dumontier and
Robert Hoehndorf and
Christopher J. O. Baker},
title = {Proceedings of the 4th International Conference on Biomedical Ontology,
{ICBO} 2013, Montreal, Canada, July 7-12, 2013},
series = {{CEUR} Workshop Proceedings},
volume = {1060},
publisher = {CEUR-WS.org},
year = {2013},
url = {https://ceur-ws.org/Vol-1060},
urn = {urn:nbn:de:0074-1060-0},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/2013.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AndradeAS12,
author = {Andr{\'{e}} Queiroz de Andrade and
Mauricio Barcellos Almeida and
Stefan Schulz},
editor = {Ronald Cornet and
Robert Stevens},
title = {Revisiting ontological foundations of the OpenEHR Entry Model},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session4-paper23.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:23 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AndradeAS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ArabandiM12,
author = {Sivaram Arabandi and
Helen Moran},
editor = {Ronald Cornet and
Robert Stevens},
title = {ClinicalKey: Terminology driven Semantic Search},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/demo\_9.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ArabandiM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Audeh12,
author = {Bissan Audeh},
editor = {Ronald Cornet and
Robert Stevens},
title = {Semantic query expansion for fuzzy proximity information retrieval
model},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/ecs\_11.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Audeh12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BadaE12,
author = {Michael Bada and
Karen Eilbeck},
editor = {Ronald Cornet and
Robert Stevens},
title = {Efforts toward a More Consistent and Interoperable Sequence Ontology},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session3-paper13.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BadaE12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BatchelorH12,
author = {Colin R. Batchelor and
Janna Hastings},
editor = {Ronald Cornet and
Robert Stevens},
title = {Waves and fields in bio-ontologies},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/sessionJ-paper24.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BatchelorH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BellozeMLSC12,
author = {Kele T. Belloze and
Daniel Igor S. B. Monteiro and
Tulio F. Lima and
Floriano P. Silva Jr. and
Maria Cl{\'{a}}udia Cavalcanti},
editor = {Ronald Cornet and
Robert Stevens},
title = {Analyzing Tools for Biomedical Text Annotation with Multiple Ontologies},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/poster\_11.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BellozeMLSC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Benevides12,
author = {Alessander Botti Benevides},
editor = {Ronald Cornet and
Robert Stevens},
title = {An ontologically well-founded framework for modelling Business Organizations,
Processes and Services},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/ecs\_5.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Benevides12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BoekerSRGRJS12,
author = {Martin Boeker and
Daniel Schober and
Djamila Raufie and
Niels Grewe and
Johannes R{\"{o}}hl and
Ludger Jansen and
Stefan Schulz},
editor = {Ronald Cornet and
Robert Stevens},
title = {Teaching Good Biomedical Ontology Design},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/sessionJ-paper25.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BoekerSRGRJS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BoellingDWH12,
author = {Christian Boelling and
Michel Dumontier and
Michael Weidlich and
Hermann{-}Georg Holzh{\"{u}}tter},
editor = {Ronald Cornet and
Robert Stevens},
title = {Role-based representation and inference of biochemical processes},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session3-paper14.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BoellingDWH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ChuaK12,
author = {Watson Wei Khong Chua and
Jung{-}Jae Kim},
editor = {Ronald Cornet and
Robert Stevens},
title = {Discovering Cross-Ontology Subsumption Relationships by Using Ontological
Annotations on Biomedical Literature},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session2-paper07.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ChuaK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ChunJSCCJ12,
author = {Hong{-}Woo Chun and
Chang{-}Hoo Jeong and
Sa{-}Kwang Song and
Yunsoo Choi and
Sung{-}Pil Choi and
Hanmin Jung},
editor = {Ronald Cornet and
Robert Stevens},
title = {Smart Searching System for Biomedical Information},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/demo\_7.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ChunJSCCJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CopelandBPSM12,
author = {Maria Copeland and
Andy Brown and
Helen E. Parkinson and
Robert Stevens and
James Malone},
editor = {Ronald Cornet and
Robert Stevens},
title = {The {SWO} Project: {A} Case Study for Applying Agile Ontology Engineering
Methods for Community Driven Ontologies},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session4-paper20.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CopelandBPSM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Courtot12,
author = {M{\'{e}}lanie Courtot},
editor = {Ronald Cornet and
Robert Stevens},
title = {Knowledge representation in Health Research: the modeling of Adverse
Events Following Immunization},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/ecs\_1.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Courtot12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CourtotBR12,
author = {M{\'{e}}lanie Courtot and
Ryan Remy Brinkman and
Alan Ruttenberg},
editor = {Ronald Cornet and
Robert Stevens},
title = {Adverse events following immunization: reporting standardization,
automatic case classification and signal detection},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/poster\_1.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CourtotBR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CoutoFZSPGDS12,
author = {Francisco M. Couto and
Jo{\~{a}}o D. Ferreira and
Jo{\~{a}}o Zamite and
Carlos Santos and
Tiago Posse and
Paulo M. L. A. Gra{\c{c}}a and
Dulce Domingos and
M{\'{a}}rio J. Silva},
editor = {Ronald Cornet and
Robert Stevens},
title = {The Epidemic Marketplace Platform: towards semantic characterization
of epidemiological resources using biomedical ontologies},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/demo\_1.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CoutoFZSPGDS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Croset12,
author = {Samuel Croset},
editor = {Ronald Cornet and
Robert Stevens},
title = {{OWL} Representation of Drug Activities on Biological Systems},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/ecs\_2.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Croset12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CrossSM12,
author = {Valerie Cross and
Pramit Silwal and
David Morell},
editor = {Ronald Cornet and
Robert Stevens},
title = {Using a Reference Ontology with Semantic Similarity in Ontology Alignment},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session4-paper19.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CrossSM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Dinesh12,
author = {Nikhil Dinesh},
editor = {Ronald Cornet and
Robert Stevens},
title = {Representing Core Themes in a Biology E-Textbook},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/ecs\_7.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Dinesh12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/DritsouTDML12,
author = {Vicky Dritsou and
Pantelis Topalis and
Emmanuel Dialynas and
Elvira Mitraka and
Christos Louis},
editor = {Ronald Cornet and
Robert Stevens},
title = {miRNAO: An Ontology for microRNAs},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/poster\_5.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/DritsouTDML12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FerreiraPCS12,
author = {Jo{\~{a}}o D. Ferreira and
Catia Pesquita and
Francisco M. Couto and
M{\'{a}}rio J. Silva},
editor = {Ronald Cornet and
Robert Stevens},
title = {Bringing epidemiology into the Semantic Web},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session1-paper02.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FerreiraPCS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FrishkoffF12,
author = {Gwen A. Frishkoff and
Robert M. Frank},
editor = {Ronald Cornet and
Robert Stevens},
title = {The {NEMO} Analysis Pipeline: {EEG} Pattern Extraction and Ontology-based
Classification},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/demo\_10.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FrishkoffF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FuGS12,
author = {Bo Fu and
Lars Grammel and
Margaret{-}Anne D. Storey},
editor = {Ronald Cornet and
Robert Stevens},
title = {BioMixer: {A} Web-based Collaborative Ontology Visualization Tool},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session4-paper21.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FuGS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GoldfainCS12,
author = {Albert Goldfain and
Lindsay G. Cowell and
Barry Smith},
editor = {Ronald Cornet and
Robert Stevens},
title = {Constructing a Lattice of Infectious Disease Ontologies from a Staphylococcus
aureus Isolate Repository},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session1-paper03.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GoldfainCS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GrayABBCEEGGHLPRTWW12,
author = {Alasdair J. G. Gray and
Sune Askjaer and
Christian Y. A. Brenninkmeijer and
Kees Burger and
Christine Chichester and
James M. Eales and
Chris T. A. Evelo and
Carole A. Goble and
Paul Groth and
Lee Harland and
Antonis Loizou and
Steve Pettifer and
Rishi Ramgolam and
Mark Thompson and
Andra Waagmeester and
Antony J. Williams},
editor = {Ronald Cornet and
Robert Stevens},
title = {The Pharmacology Workspace: {A} Platform for Drug Discovery},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/demo\_4.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GrayABBCEEGGHLPRTWW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GregoPC12,
author = {Tiago Grego and
Francisco R. Pinto and
Francisco M. Couto},
editor = {Ronald Cornet and
Robert Stevens},
title = {Identifying Chemical Entities based on ChEBI},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/demo\_8.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GregoPC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Haemmerli12,
author = {Marion Haemmerli},
editor = {Ronald Cornet and
Robert Stevens},
title = {The Issue of Perspectivality in Formal Theories of Spatial Representation},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/ecs\_6.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Haemmerli12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HastingsMDEMTOS12,
author = {Janna Hastings and
Paula de Matos and
Adriano Dekker and
Marcus Ennis and
Venkatesh Muthukrishnan and
Steve Turner and
Gareth I. Owen and
Christoph Steinbeck},
editor = {Ronald Cornet and
Robert Stevens},
title = {Modular Extensions to the ChEBI Ontology},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/poster\_7.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HastingsMDEMTOS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HastingsNCMS12,
author = {Janna Hastings and
Nicolas Le Nov{\`{e}}re and
Werner Ceusters and
Kevin Mulligan and
Barry Smith},
editor = {Ronald Cornet and
Robert Stevens},
title = {Wanting what we don't want to want: Representing addiction in interoperable
bio-ontologies},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session3-paper12.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HastingsNCMS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/JuppGMS12,
author = {Simon Jupp and
Andrew Gibson and
James Malone and
Robert Stevens},
editor = {Ronald Cornet and
Robert Stevens},
title = {Taking a view on bio-ontologies},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session4-paper22.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/JuppGMS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Kless12,
author = {Daniel Kless},
editor = {Ronald Cornet and
Robert Stevens},
title = {Quality ontology engineering based on thesauri},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/ecs\_10.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Kless12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/KozakiMIO12,
author = {Kouji Kozaki and
Riichiro Mizoguchi and
Takeshi Imai and
Kazuhiko Ohe},
editor = {Ronald Cornet and
Robert Stevens},
title = {Identity Tracking of a Disease as a Causal Chain},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/sessionJ-paper26.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/KozakiMIO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Lange12,
author = {Matthew C. Lange},
editor = {Ronald Cornet and
Robert Stevens},
title = {Nutriknow: a comprehensive foods-for-health knowledge repository},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/ecs\_3.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Lange12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Legaz-GarciaMTF12,
author = {Mar{\'{\i}}a Del Carmen Legaz{-}Garc{\'{\i}}a and
Catalina Mart{\'{\i}}nez{-}Costa and
Marcos Men{\'{a}}rguez Tortosa and
Jesualdo Tom{\'{a}}s Fern{\'{a}}ndez{-}Breis},
editor = {Ronald Cornet and
Robert Stevens},
title = {Exploitation of ontologies for the management of clinical archetypes
in ArchMS},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session3-paper16.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Legaz-GarciaMTF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LiangSSR12,
author = {Shao Fen Liang and
Robert Stevens and
Donia Scott and
Alan L. Rector},
editor = {Ronald Cornet and
Robert Stevens},
title = {OntoVerbal: a Prot{\'{e}}g{\'{e}} plugin for verbalising
ontology classes},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/demo\_5.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LiangSSR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Lopez-Garcia12,
author = {Pablo L{\'{o}}pez{-}Garc{\'{\i}}a},
editor = {Ronald Cornet and
Robert Stevens},
title = {Ontology customization for biomedical informatics},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/ecs\_4.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Lopez-Garcia12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MalhotraGH12,
author = {Ashutosh Malhotra and
Michaela G{\"{u}}ndel and
Martin Hofmann{-}Apitius},
editor = {Ronald Cornet and
Robert Stevens},
title = {{ADO:} {A} formal ontology for understanding structure of information
and domain knowledge of Alzheimer's disease},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/poster\_2.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MalhotraGH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MasuyaM12,
author = {Hiroshi Masuya and
Riichiro Mizoguchi},
editor = {Ronald Cornet and
Robert Stevens},
title = {An Ontology of Gene},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session1-paper05.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MasuyaM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MendoncaCAA12,
author = {Fabr{\'{\i}}cio Mendon{\c{c}}a and
K{\'{a}}tia Coelho and
Andr{\'{e}} Queiroz de Andrade and
Mauricio Barcellos Almeida},
editor = {Ronald Cornet and
Robert Stevens},
title = {Knowledge Acquisition in the construction of ontologies: a case study
in the domain of hematology},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session2-paper08.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MendoncaCAA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MikroyannidiIS12,
author = {Eleni Mikroyannidi and
Luigi Iannone and
Robert Stevens},
editor = {Ronald Cornet and
Robert Stevens},
title = {{RIO:} The Regularities Inspector for Ontologies Plugin for Prot{\'{e}}g{\'{e}}-4},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/demo\_2.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MikroyannidiIS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Minarro-GimenezAFA12,
author = {Jos{\'{e}} Antonio Mi{\~{n}}arro{-}Gim{\'{e}}nez and
Mikel Ega{\~{n}}a Aranguren and
Jesualdo Tom{\'{a}}s Fern{\'{a}}ndez{-}Breis and
Erick Antezana},
editor = {Ronald Cornet and
Robert Stevens},
title = {NCBO-Galaxy: bridging the BioPortal web services and the Galaxy platform},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/demo\_3.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Minarro-GimenezAFA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MitrakaTDDL12,
author = {Elvira Mitraka and
Pantelis Topalis and
Emmanuel Dialynas and
Vicky Dritsou and
Christos Louis},
editor = {Ronald Cornet and
Robert Stevens},
title = {{IDODEN:} An Ontology for Dengue},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/poster\_4.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MitrakaTDDL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/NiBKRREB12,
author = {Li Ni and
Carol J. Bult and
James A. Kadin and
Joel E. Richardson and
Martin Ringwald and
Janan T. Eppig and
Judith A. Blake},
editor = {Ronald Cornet and
Robert Stevens},
title = {Using Biomedical Ontologies for Data Representation and Management
in the Mouse Genome Informatics {(MGI)} System},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/poster\_3.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/NiBKRREB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Niggemann12,
author = {J{\"{o}}rg Niggemann},
editor = {Ronald Cornet and
Robert Stevens},
title = {The ontological challenge of laterality},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/poster\_8.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Niggemann12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/OberkampfZB12,
author = {Heiner Oberkampf and
Sonja Zillner and
Bernhard Bauer},
editor = {Ronald Cornet and
Robert Stevens},
title = {Interpreting Patient Data using Medical Background Knowledge},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session2-paper06.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/OberkampfZB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/RichessonPMBV12,
author = {Rachel L. Richesson and
Jyotishman Pathak and
Wendy McLeod and
Ginger Blackmon and
Kendra Vehik},
editor = {Ronald Cornet and
Robert Stevens},
title = {Requirements and Strategy for the Development of a Pediatric Drug
Ontology},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session2-paper09.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/RichessonPMBV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/RodriguesSBS12,
author = {Jean Marie Rodrigues and
Stefan Schulz and
C{\'{e}}dric Bousquet and
Julien Souvignet},
editor = {Ronald Cornet and
Robert Stevens},
title = {The {CEN} {ISO} Standard Categorial Structure as a Top-Level Set of
Constraints for Ontology Disambiguation},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session3-paper15.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/RodriguesSBS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SantamariaFGSW12,
author = {Suzanne L. Santamaria and
Maureen Fallon and
Julie M. Green and
Stefan Schulz and
Jeffrey R. Wilcke},
editor = {Ronald Cornet and
Robert Stevens},
title = {Developing the Animals in Context Ontology},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session1-paper04.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SantamariaFGSW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SchoberSB12,
author = {Daniel Schober and
Vojtech Sv{\'{a}}tek and
Martin Boeker},
editor = {Ronald Cornet and
Robert Stevens},
title = {Checking Class Labels against Naming Conventions: First experiences
with the OntoCheck Prot{\'{e}}g{\'{e}} plugin},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session2-paper10.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SchoberSB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Seyed12,
author = {Patrice Seyed},
editor = {Ronald Cornet and
Robert Stevens},
title = {A Method for Evaluating Ontologies},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/ecs\_12.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Seyed12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SeyedRSPS12,
author = {Patrice Seyed and
Alan L. Rector and
Uli Sattler and
Bijan Parsia and
Robert Stevens},
editor = {Ronald Cornet and
Robert Stevens},
title = {Representation of Part-Whole Relationships in {SNOMED} {CT}},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session3-paper11.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SeyedRSPS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SojicK12,
author = {Aleksandra Sojic and
Oliver Kutz},
editor = {Ronald Cornet and
Robert Stevens},
title = {Representing biomedical knowledge: {A} view from the philosophy of
science},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/ecs\_8.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SojicK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/VenkatesanMK12,
author = {Aravind Venkatesan and
Vladimir Mironov and
Martin Kuiper},
editor = {Ronald Cornet and
Robert Stevens},
title = {Towards an integrated knowledge system for capturing gene expression
events},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session4-paper17.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/VenkatesanMK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/VoyloshnikovaFGS12,
author = {Elena Voyloshnikova and
Bo Fu and
Lars Grammel and
Margaret{-}Anne D. Storey},
editor = {Ronald Cornet and
Robert Stevens},
title = {BioMixer: Visualizing Mappings of Biomedical Ontologies},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/demo\_6.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/VoyloshnikovaFGS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WalkSTNNM12,
author = {Simon Walk and
Markus Strohmaier and
Tania Tudorache and
Natalya Fridman Noy and
Csongor Nyulas and
Mark A. Musen},
editor = {Ronald Cornet and
Robert Stevens},
title = {Recommending Concepts to Experts: An Exploration of Recommender Techniques
for Collaborative Ontology Engineering Platforms in the Biomedical
Domain},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session4-paper18.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WalkSTNNM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WallsCMMCSJ12,
author = {Ramona L. Walls and
Hong Cui and
James A. Macklin and
Chris Mungall and
Laurel Cooper and
Dennis W. Stevenson and
Pankaj Jaiswal},
editor = {Ronald Cornet and
Robert Stevens},
title = {Mapping of glossary terms from the Flora of North America to the Plant
Ontology enhances both resources},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/poster\_6.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WallsCMMCSJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WallsSEGSJ12,
author = {Ramona L. Walls and
Barry Smith and
Justin Elser and
Albert Goldfain and
Dennis W. Stevenson and
Pankaj Jaiswal},
editor = {Ronald Cornet and
Robert Stevens},
title = {A plant disease extension of the Infectious Disease Ontology},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/session1-paper01.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WallsSEGSJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Wang12,
author = {Xiaowei Wang},
editor = {Ronald Cornet and
Robert Stevens},
title = {An Ontology of Software Evolution},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/ecs\_9.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Wang12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WelterBHJMP12,
author = {Danielle Welter and
Tony Burdett and
Lucia Hindorff and
Heather Junkins and
Jackie MacArthur and
Helen E. Parkinson},
editor = {Ronald Cornet and
Robert Stevens},
title = {{GOCI:} An Ontology-Driven Search and Curation Infrastructure for
the {NHGRI} {GWAS} Catalog},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/poster\_9.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WelterBHJMP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/XiangLH12,
author = {Zuoshuang Xiang and
Yu Lin and
Yongqun He},
editor = {Ronald Cornet and
Robert Stevens},
title = {Ontorat web server for automatic generation and annotations of new
ontology terms},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/poster\_12.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/XiangLH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/YaoBG12,
author = {Robert Yao and
Jeffrey Buchhalter and
Graciela Gonzalez},
editor = {Ronald Cornet and
Robert Stevens},
title = {Proposed Ontology for Seizure and Epilepsy},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/poster\_10.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/YaoBG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ZhengXSH12,
author = {Jie Zheng and
Zuoshuang Xiang and
Christian J. Stoeckert Jr. and
Yongqun He},
editor = {Ronald Cornet and
Robert Stevens},
title = {Ontodog: {A} Web-based Ontology Community View Generator},
booktitle = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897/poster\_13.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ZhengXSH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icbo/2011,
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-833},
urn = {urn:nbn:de:0074-833-7},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/2011.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icbo/2012,
editor = {Ronald Cornet and
Robert Stevens},
title = {Proceedings of the 3rd International Conference on Biomedical Ontology
{(ICBO} 2012), {KR-MED} Series, Graz, Austria, July 21-25, 2012},
series = {{CEUR} Workshop Proceedings},
volume = {897},
publisher = {CEUR-WS.org},
year = {2012},
url = {https://ceur-ws.org/Vol-897},
urn = {urn:nbn:de:0074-897-7},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/2012.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AbdullaISS11,
author = {Tariq Abdulla and
Ryan A. Imms and
Jean{-}Marc Schleich and
Ron Summers},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Composite Annotation for Heart Development},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper7.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:24 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AbdullaISS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AiAARWS11,
author = {Jiye Ai and
Mauricio Barcellos Almeida and
Andr{\'{e}} Queiroz de Andrade and
Alan Ruttenberg and
David Tai Wai Wong and
Barry Smith},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Towards a Body Fluids Ontology: {A} Unified Application Ontology for
Basic and Translational Science},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper73.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AiAARWS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AlmeidaPAS11,
author = {Mauricio Barcellos Almeida and
Anna Barbara de Freitas Carneiro Proietti and
Jiye Ai and
Barry Smith},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {The Blood Ontology: An Ontology in the Domain of Hematology},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper29.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AlmeidaPAS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/AndradeA11,
author = {Andr{\'{e}} Queiroz de Andrade and
Mauricio Barcellos Almeida},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Epistemological Issues in Information Organization Instruments: Ontologies
and Health Information Models},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper91.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/AndradeA11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ArighiNBBCDDDEHRRSZW11,
author = {Cecilia N. Arighi and
Darren A. Natale and
Judith A. Blake and
Carol J. Bult and
Michael Caudy and
Alexander D. Diehl and
Harold J. Drabkin and
Peter D'Eustachio and
Alexei V. Evsikov and
Hongzhan Huang and
Natalia V. Roberts and
Alan Ruttenberg and
Barry Smith and
Jian Zhang and
Cathy H. Wu},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Protein-Centric Connection of Biomedical Knowledge: Protein Ontology
{(PRO)} Research and Annotation Tools},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper49.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ArighiNBBCDDDEHRRSZW11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ArneyWWG11,
author = {David Arney and
Sandy Weininger and
Susan F. Whitehead and
Julian M. Goldman},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Supporting Medical Device Adverse Event Analysis in an Interoperable
Clinical Environment: Design of a Data Logging and Playback System},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper65.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ArneyWWG11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BalhoffDLMVWM11,
author = {James P. Balhoff and
Wasila M. Dahdul and
Hilmar Lapp and
Peter E. Midford and
Todd J. Vision and
Monte Westerfield and
Paula M. Mabee},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Employing Reasoning within the Phenoscape Knowledgebase},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper30.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BalhoffDLMVWM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BalhoffML11,
author = {James P. Balhoff and
Peter E. Midford and
Hilmar Lapp},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Integrating Anatomy and Phenotype Ontologies with Taxonomic Hierarchies},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper82.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BalhoffML11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BelloDWDSRBME11,
author = {Susan M. Bello and
Allan Peter Davis and
Thomas C. Wiegers and
Mary E. Dolan and
Cynthia L. Smith and
Joel E. Richardson and
Judith A. Blake and
Carolyn J. Mattingly and
Janan T. Eppig},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Waiting for a Robust Disease Ontology: {A} Merger of {OMIM} and MeSH
as a Practical Interim Solution},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper31.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BelloDWDSRBME11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BradfordS11,
author = {Yvonne M. Bradford and
Ceri E. Van Slyke},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Ontologies in the Fish Tank: Using the Zebrafish Anatomy Ontology
with Other {OBO} Ontologies to Annotate Expression and Phenotype},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper84.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BradfordS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/BrushVTJSH11,
author = {Matthew H. Brush and
Nicole A. Vasilevsky and
Carlo Torniai and
Tenille Johnson and
Chris Shaffer and
Melissa A. Haendel},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Developing a Reagent Application Ontology within the {OBO} Foundry
Framework},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper32.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/BrushVTJSH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CanadaTCC11,
author = {Brian A. Canada and
Georgia K. Thomas and
Timothy Cooper and
Keith C. Cheng},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {A Case Study in Using {ZFA} and {PATO} for Describing Histological
Phenotypes in the Larval Zebrafish},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper90.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CanadaTCC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CanadaTSWC11,
author = {Brian A. Canada and
Georgia K. Thomas and
John Schleicher and
James Ze Wang and
Keith C. Cheng},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {{SHIRAZ} and {CABERNET:} Leveraging Automation, Crowdsourcing, and
Ontologies to Improve the Accuracy and Throughput of Zebrafish Histological
Phenotype Annotations},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper50.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CanadaTSWC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CastroGG11,
author = {Alexander Garc{\'{\i}}a Castro and
Olga L. Giraldo and
Leyla J. Garc{\'{\i}}a},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Annotating Experimental Records Using Ontologies},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper12.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CastroGG11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ChengDP11,
author = {Shunfeng Cheng and
Diganta Das and
Michael G. Pecht},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Using Failure Modes, Mechanisms, and Effects Analysis in Medical Device
Adverse Event Investigations},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper66.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ChengDP11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ChibucosZSUGH11,
author = {Marcus C. Chibucos and
Adrienne E. Zweifel and
Deborah A. Siegele and
Peter Uetz and
Michelle G. Giglio and
James C. Hu},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {The Ontology of Microbial Phenotypes {(OMP):} {A} Precomposed Ontology
Based on Cross Products from Multiple External Ontologies that is
Used for Guiding Microbial Phenotype Annotation},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper33.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ChibucosZSUGH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CookGNMG11,
author = {Daniel L. Cook and
Michal Galdzicki and
Maxwell Lewis Neal and
Jos{\'{e}} L. V. Mejino Jr. and
John H. Gennari},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {HeartCyc: {A} Cardiac Cycle Process Ontology Based in the Ontology
of Physics for Biology},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper6.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CookGNMG11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CourtotB11,
author = {M{\'{e}}lanie Courtot and
Ryan Remy Brinkman},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Towards an Adverse Event Reporting Ontology},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper34.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CourtotB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CourtotBR11,
author = {M{\'{e}}lanie Courtot and
Ryan Remy Brinkman and
Alan Ruttenberg},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Reporting Adverse Events: Basis for a Common Representation},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper60.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CourtotBR11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CourtotMBR11,
author = {M{\'{e}}lanie Courtot and
Chris Mungall and
Ryan Remy Brinkman and
Alan Ruttenberg},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Building the {OBO} Foundry - One Policy at a Time},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper72.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CourtotMBR11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CrossSHSPCPS11,
author = {Valerie Cross and
Cosmin Stroe and
Xueheng Hu and
Pramit Silwal and
Maryam Panahiazar and
Isabel F. Cruz and
Priti Parikh and
Amit P. Sheth},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Aligning the Parasite Experiment Ontology and the Ontology for Biomedical
Investigations Using AgreementMaker},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper17.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CrossSHSPCPS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/CruzSPCC11,
author = {Isabel F. Cruz and
Cosmin Stroe and
Catia Pesquita and
Francisco M. Couto and
Valerie Cross},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Biomedical Ontology Matching Using the AgreementMaker System},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper51.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/CruzSPCC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/DahdulBLMVWM11,
author = {Wasila M. Dahdul and
James P. Balhoff and
Hilmar Lapp and
Peter E. Midford and
Todd J. Vision and
Monte Westerfield and
Paula M. Mabee},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Phenoscape: Use Cases and Anatomy Ontology Requirements for Linking
Evolutionary and Model Organism Phenotypes},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper83.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/DahdulBLMVWM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/DhombresVRHOUCC11,
author = {Ferdinand Dhombres and
Pierre{-}Yves Vandenbussche and
Ana Rath and
Marc Hanauer and
Annie Olry and
Bruno Urbero and
R{\'{e}}my Choquet and
Jean Charlet},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {OntoOrpha: An Ontology to Support Edition and Audit of Knowledge of
Rare Diseases in {ORPHANET}},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper35.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/DhombresVRHOUCC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/EmilssonF11,
author = {Pia Emilsson and
Kerstin Forsberg},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Adverse Events from Clinical Studies in Pharmaceutical Research and
Development},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper61.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/EmilssonF11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Essaid11,
author = {Shahim Essaid},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {An Ontology for Gastrointestinal Endoscopy},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper36.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Essaid11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FerreiraC11,
author = {Jo{\~{a}}o D. Ferreira and
Francisco M. Couto},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Generic Semantic Relatedness Measure for Biomedical Ontologies},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper16.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FerreiraC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/FrishkoffFL11,
author = {Gwen A. Frishkoff and
Robert M. Frank and
Paea LePendu},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Ontology-Based Analysis of Event-Related Potentials},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper8.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/FrishkoffFL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GrossHKR11,
author = {Anika Gro{\ss} and
Michael Hartung and
Toralf Kirsten and
Erhard Rahm},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Mapping Composition for Matching Large Life Science Ontologies},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper15.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/GrossHKR11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/GuttulaDWMKZS11,
author = {Chaitanya Guttula and
Alok Dhamanaskar and
Rui Wang and
John A. Miller and
Jessica C. Kissinger and
Jie Zheng and
Christian J. Stoeckert Jr.},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Enriching the Ontology for Biomedical Investigations {(OBI)} to Improve
its Suitability for Web Service Annotations},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper37.pdf},
timestamp = {Thu, 11 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icbo/GuttulaDWMKZS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HastingsBNS11,
author = {Janna Hastings and
Colin R. Batchelor and
Fabian Neuhaus and
Christoph Steinbeck},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {What's in an 'is about' Link? Chemical Diagrams and the Information
Artifact Ontology},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper26.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HastingsBNS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HastingsCSM11,
author = {Janna Hastings and
Werner Ceusters and
Barry Smith and
Kevin Mulligan},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Dispositions and Processes in the Emotion Ontology},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper10.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HastingsCSM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HastingsMDEHJOTS11,
author = {Janna Hastings and
Paula de Matos and
Adriano Dekker and
Marcus Ennis and
Kenneth Haug and
Zara Josephs and
Gareth I. Owen and
Steve Turner and
Christoph Steinbeck},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Recent Developments in the ChEBI Ontology},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper38.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HastingsMDEHJOTS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HayamizuR11,
author = {Terry F. Hayamizu and
Martin Ringwald},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Mouse Anatomy Ontologies and {GXD}},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper77.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HayamizuR11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HeXSTC11,
author = {Yongqun He and
Zuoshuang Xiang and
Sirarat Sarntivijai and
Luca Toldo and
Werner Ceusters},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {{AEO:} {A} Realism-Based Biomedical Ontology for the Representation
of Adverse Events},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper59.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HeXSTC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HoganGT11,
author = {William R. Hogan and
Swetha Garimalla and
Shariq A. Tariq},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Representing the Reality Underlying Demographic Data},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper20.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HoganGT11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/HoganGTC11,
author = {William R. Hogan and
Swetha Garimalla and
Shariq A. Tariq and
Werner Ceusters},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Representing Local Identifiers in a Referent-Tracking System},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper39.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/HoganGTC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ImamLGGBM11,
author = {Fahim T. Imam and
Stephen D. Larson and
Jeffrey S. Grethe and
Amarnath Gupta and
Anita E. Bandrowski and
Maryann E. Martone},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {{NIFSTD} and NeuroLex: Comprehensive Neuroscience Ontology Development
Based on Multiple Biomedical Ontologies and Community Involvement},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper67.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ImamLGGBM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/JiangDPC11,
author = {Guoqian Jiang and
Jon D. Duke and
Jyotishman Pathak and
Christopher G. Chute},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {An Ontological Representation of Adverse Drug Events},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper63.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/JiangDPC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/JiangSCSRC11,
author = {Guoqian Jiang and
Harold R. Solbrig and
Robert J. G. Chalmers and
Kent A. Spackman and
Alan L. Rector and
Christopher G. Chute},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {A Case Study of {ICD-11} Anatomy Value Set Extraction from {SNOMED}
{CT}},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper18.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/JiangSCSRC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/JuppHIKOSWS11,
author = {Simon Jupp and
Matthew Horridge and
Luigi Iannone and
Julie Klein and
Stuart Owen and
Joost Schanstra and
Katy Wolstencroft and
Robert Stevens},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Populous: {A} Tool for Populating an Ontology},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper53.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/JuppHIKOSWS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/KarlssonBS11,
author = {Daniel Karlsson and
Martin Berzell and
Stefan Schulz},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Information Models and Ontologies for Representing the Electronic
Health Record},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper21.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/KarlssonBS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/KutzMHCS11,
author = {Oliver Kutz and
Till Mossakowski and
Janna Hastings and
Alexander Garc{\'{\i}}a Castro and
Aleksandra Sojic},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Hyperontology for the Biomedical Ontologist: {A} Sketch and Some Examples},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper76.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/KutzMHCS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LaSalleB11,
author = {Bernard LaSalle and
Richard L. Bradshaw},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Classifying Adverse Events from Clinical Trials},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper62.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LaSalleB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LandgrebeS11,
author = {Jobst Landgrebe and
Barry Smith},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {The {HL7} Approach to Semantic Interoperability},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper19.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LandgrebeS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LangeGK11,
author = {Matthew Lange and
J. Bruce German and
Jim Kaput},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Workflows and Framework for Nutritional/Metabolic Phenotype/Genotype
and Foods-for-Health Knowledge Integration},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper93.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LangeGK11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LePenduMS11,
author = {Paea LePendu and
Mark A. Musen and
Nigam H. Shah},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {The Age of Data-Driven Medicine: Mining the Electronic Health Record},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper86.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LePenduMS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LevinRMC11,
author = {Mikhail K. Levin and
Alan Ruttenberg and
Anna Maria Masci and
Lindsay G. Cowell},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {\emph{owl{\_}cpp}, a {C++} Library for Working with {OWL} Ontologies},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper40.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LevinRMC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Lin11,
author = {Yu Lin},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Refining Ontology for Glucose Metabolism Disorders},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper89.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Lin11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LinXH11,
author = {Yu Lin and
Zuoshuang Xiang and
Yongqun He},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Towards a Semantic Web Application: Ontology-Driven Ortholog Clustering
Analysis},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper5.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LinXH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/LoweCCWMCC11,
author = {Brian Lowe and
Brian Caruso and
Nick Cappadona and
Miles Worthington and
Stella Mitchell and
Jon Corson{-}Rikert},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {The Vitro Integrated Ontology Editor and Semantic Web Application},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper54.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/LoweCCWMCC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MadaniSMD11,
author = {Sina Madani and
Dean F. Sittig and
Parsa Mirhaji and
Kim Dunn},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Quality of Care Domain Modeling in Cancer: {A} Semantic Approach},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper87.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MadaniSMD11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MasciLRC11,
author = {Anna Maria Masci and
Mikhail K. Levin and
Alan Ruttenberg and
Lindsay G. Cowell},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Connecting Ontologies for the Representation of Biological Pathways},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper74.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MasciLRC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MasciRBGC11,
author = {Anna Maria Masci and
Jeffrey Roach and
Bernard de Bono and
Pierre Grenon and
Lindsay G. Cowell},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Bridging Multiple Ontologies: Representation of the Liver Immune Response},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper75.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MasciRBGC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MasuyaGTWOKKDKHWTM11,
author = {Hiroshi Masuya and
Georgios V. Gkoutos and
Nobuhiko Tanaka and
Kazunori Waki and
Yoshihiro Okuda and
Tatsuya Kushida and
Norio Kobayashi and
Koji Doi and
Kouji Kozaki and
Robert Hoehndorf and
Shigeharu Wakana and
Tetsuro Toyoda and
Riichiro Mizoguchi},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {An Advanced Strategy for Integration of Biological Measurement Data},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper11.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MasuyaGTWOKKDKHWTM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/McCuskerLM11,
author = {Jamie P. McCusker and
Joanne S. Luciano and
Deborah L. McGuinness},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Towards an Ontology for Conceptual Modeling},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper25.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/McCuskerLM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MeehanMBD11,
author = {Terrence F. Meehan and
Christopher J. Mungall and
Judith A. Blake and
Alexander D. Diehl},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Gene Ontology Signatures for Immune Cell-Types Inferred by Gene Expression
Analysis},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper41.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MeehanMBD11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MeehanMD11,
author = {Terrence F. Meehan and
Christopher J. Mungall and
Alexander D. Diehl},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Revising the Cell Ontology},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper2.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MeehanMD11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MikoYBSD11,
author = {Istv{\'{a}}n Mik{\'{o}} and
Matthew J. Yoder and
Matthew A. Bertone and
Katja C. Seltmann and
Andrew R. Deans},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Multi-Species Anatomy Ontology Development Requires a Pluralist Approach
to Label-Class Mapping},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper80.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MikoYBSD11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MitchellTLCWACDRH11,
author = {Stella Mitchell and
Carlo Torniai and
Brian Lowe and
Jon Corson{-}Rikert and
Melanie Wilson and
Mansoor Ahmed and
Shanshan Chen and
Ying Ding and
Nicholas Rejack and
Melissa A. Haendel},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Aligning Research Resource and Researcher Representation: The eagle-i
and {VIVO} Use Case},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper42.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MitchellTLCWACDRH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MizoguchiKKYIWO11,
author = {Riichiro Mizoguchi and
Kouji Kozaki and
Hiroko Kou and
Yuki Yamagata and
Takeshi Imai and
Kayo Waki and
Kazuhiko Ohe},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {River Flow Model of Diseases},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper9.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MizoguchiKKYIWO11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MungallABCCCCDEEGKILMMTTTTWH11,
author = {Chris Mungall and
David Anderson and
Anita E. Bandrowski and
Brian A. Canada and
Andrew Chatr{-}aryamontri and
Keith C. Cheng and
P. Michael Conn and
Kara Dolinski and
Mark H. Ellisman and
Janan T. Eppig and
Jeffrey S. Grethe and
Joseph W. Kemnitz and
Shawn Iadonato and
Stephen D. Larson and
Charles Magness and
Maryann E. Martone and
Mike Tyers and
Carlo Torniai and
Olga G. Troyanskaya and
Judith Turner and
Monte Westerfield and
Melissa A. Haendel},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {An Ontology-Based Approach to Linking Model Organisms and Resources
to Human Diseases},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper43.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MungallABCCCCDEEGKILMMTTTTWH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/MungallHIMMOTD11,
author = {Christopher J. Mungall and
Melissa A. Haendel and
Amelia Ireland and
Shahid Manzoor and
Terry Meehan and
David Osumi{-}Sutherland and
Carlo Torniai and
Alexander D. Diehl},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Modularization for the Cell Ontology},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper71.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/MungallHIMMOTD11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/NairTWNM11,
author = {Jithun Nair and
Tania Tudorache and
Trish Whetzel and
Natalya Fridman Noy and
Mark A. Musen},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {The BioPortal Import Plugin for Prot{\'{e}}g{\'{e}}},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper55.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/NairTWNM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/NicholsMB11,
author = {B. Nolan Nichols and
Jos{\'{e}} L. V. Mejino Jr. and
James F. Brinkley},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {The Foundational Model of Neuroanatomy Ontology: An Ontology Framework
to Support Neuroanatomical Data Integration},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper92.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/NicholsMB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Ogbuji11,
author = {Chimezie Ogbuji},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {A Framework Ontology for Computer-Based Patient Record Systems},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper28.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Ogbuji11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Osumi-Sutherland11,
author = {David Osumi{-}Sutherland},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {{FUNCARO:} {A} Functional Extension to {CARO}},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper78.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Osumi-Sutherland11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Osumi-Sutherland11a,
author = {David Osumi{-}Sutherland},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {{CARO} 2.0},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper81.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Osumi-Sutherland11a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Overton11,
author = {James A. Overton},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Philosophy, Ontology, and Scientific Explanation},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper88.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Overton11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/PallaTSD11,
author = {Ravi Palla and
Dan Tecuci and
Vinay D. Shet and
Math{\"{a}}us Dejori},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {A Meta-Data Approach to Querying Multiple Biomedical Ontologies},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper69.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/PallaTSD11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/PangAPM11,
author = {Chao Pang and
Tomasz Adamusiak and
Helen E. Parkinson and
James Malone},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Rapid Development of an Ontology of Coriell Cell Lines},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper3.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/PangAPM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/PathakMWKCYR11,
author = {Jyotishman Pathak and
Shawn P. Murphy and
Brian N. Willaert and
Hilal M. Kremers and
Christopher G. Chute and
Barbara P. Yawn and
Walter A. Rocca},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Using RxNorm to Extract Medication Data from Electronic Health Records
in the Rochester Epidemiology Project},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper44.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/PathakMWKCYR11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/PesquitaC11,
author = {Catia Pesquita and
Francisco M. Couto},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Where {GO} is Going and What it Means for Ontology Extension},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper1.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/PesquitaC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Petrova11,
author = {Mila Petrova},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {One Empirical Study, Three Tests of Translation, Many Questions on
Biomedical Ontologies: Limited Contribution of MeSH Terms to Effective
Literature Searches on 'Health-Related Values'},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper85.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Petrova11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/PuriGJYV11,
author = {Colin A. Puri and
Karthik Gomadam and
Prateek Jain and
Peter Z. Yeh and
Kunal Verma},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Multiple Ontologies in Healthcare Information Technology: Motivations
and Recommendation for Ontology Mapping and Alignment},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper70.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/PuriGJYV11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/Sahoo11,
author = {Satya Sanket Sahoo},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Towards Desiderata for Provenance Ontologies in Biomedicine},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper45.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/Sahoo11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SarntivijaiXMDVSPMPAH11,
author = {Sirarat Sarntivijai and
Zuoshuang Xiang and
Terrence F. Meehan and
Alexander D. Diehl and
Uma Vempati and
Stephan C. Sch{\"{u}}rer and
Chao Pang and
James Malone and
Helen E. Parkinson and
Brian D. Athey and
Yongqun He},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Cell Line Ontology: Redesigning the Cell Line Knowledgebase to Aid
Integrative Translational Informatics},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper4.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SarntivijaiXMDVSPMPAH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SchneiderB11,
author = {Luc Schneider and
Mathias Brochhausen},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {The {CHRONIOUS} Ontology Suite: Methodology and Design Principles},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper22.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SchneiderB11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SchulzBH11,
author = {Stefan Schulz and
Mathias Brochhausen and
Robert Hoehndorf},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Higgs Bosons, Mars Missions, and Unicorn Delusions: How to Deal with
Terms of Dubious Reference in Scientific Ontologies},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper24.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SchulzBH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SeyedPGC11,
author = {Patrice Seyed and
John Pacheco and
Andrew Goldenkranz and
Vinay K. Chaudhri},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Modeling Issues and Solutions: Building a Taxonomy from a Biology
Textbook},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper46.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SeyedPGC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/SeyedS11,
author = {Patrice Seyed and
Stuart C. Shapiro},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Applying Rigidity to Standardizing {OBO} Foundry Candidate Ontologies},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper23.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/SeyedS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/TaoJCSC11,
author = {Cui Tao and
Guoqian Jiang and
Kimberly Clark and
Deepak K. Sharma and
Christopher G. Chute},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Toward Answering Time-Related Questions from Adverse Event Reports
Using Ontology-Based Approaches},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper64.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/TaoJCSC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/TavaresBFFGPC11,
author = {Bruno Tavares and
Hugo P. Bastos and
Daniel Faria and
Jo{\~{a}}o D. Ferreira and
Tiago Grego and
Catia Pesquita and
Francisco M. Couto},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {The Biomedical Ontology Applications {(BOA)} Framework},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper56.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/TavaresBFFGPC11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/TorniaiBVSWJCSH11,
author = {Carlo Torniai and
Matthew H. Brush and
Nicole A. Vasilevsky and
Erik Segerdell and
Melanie Wilson and
Tenille Johnson and
Karen Corday and
Chris Shaffer and
Melissa A. Haendel},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Developing an Application Ontology for Biomedical Resource Annotation
and Retrieval: Challenges and Lessons Learned},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper14.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/TorniaiBVSWJCSH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/TravillianMPHHSP11,
author = {Ravensara S. Travillian and
James Malone and
Chao Pang and
John M. Hancock and
Peter W. H. Holland and
Paul N. Schofield and
Helen E. Parkinson},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {The Vertebrate Bridging Ontology {(VBO)}},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper79.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/TravillianMPHHSP11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/VandenbusscheDCCL11,
author = {Pierre{-}Yves Vandenbussche and
Ferdinand Dhombres and
Sylvie Cormont and
Jean Charlet and
Eric Lepage},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Biomedical Analyses: {OWL} Model Based Edition},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper47.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/VandenbusscheDCCL11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/VempatiVASPCSKMLS11,
author = {Uma Vempati and
Ubbo Visser and
Saminda Abeyruwan and
Kunie Sakurai and
Magdalena Przydzial and
Caty Chung and
Robin P. Smith and
Amar Koleti and
Christopher Mader and
Vance P. Lemmon and
Stephan C. Sch{\"{u}}rer},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Bioassay Ontology to Describe High-Throughput Screening Assays and
their Results},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper27.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/VempatiVASPCSKMLS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WhetzelJYDFMS11,
author = {Patricia L. Whetzel and
Cl{\'{e}}ment Jonquet and
Cherie Youn and
Michael Dorf and
Ray W. Fergerson and
Mark A. Musen and
Nigam Shah},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {The {NCBO} Annotator: Ontology-Based Annotation as a Web Service},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper57.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WhetzelJYDFMS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/WhetzelNSADFSSCM11,
author = {Patricia L. Whetzel and
Natasha F. Noy and
Nigam Shah and
Paul R. Alexander and
Michael Dorf and
Ray W. Fergerson and
Margaret{-}Anne D. Storey and
Barry Smith and
Christopher G. Chute and
Mark A. Musen},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Bioportal: Ontologies and Integrated Data Resources at the Click of
a Mouse},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper52.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/WhetzelNSADFSSCM11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/XiangLH11,
author = {Zuoshuang Xiang and
Yu Lin and
Yongqun He},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {OntoFox and its Application in Development of Brucellosis Ontology},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper58.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/XiangLH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/XiangMRH11,
author = {Zuoshuang Xiang and
Chris Mungall and
Alan Ruttenberg and
Yongqun He},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Ontobee: {A} Linked Data Server and Browser for Ontology Terms},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper48.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/XiangMRH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/YanHKSSR11,
author = {Ying Yan and
Janna Hastings and
Jee{-}Hyub Kim and
Stefan Schulz and
Christoph Steinbeck and
Dietrich Rebholz{-}Schuhmann},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Use of Multiple Ontologies to Characterize the Bioactivity of Small
Molecules},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper68.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/YanHKSSR11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/YaoG11,
author = {Robert Yao and
Graciela Gonzalez},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Applications for a Translational Biomedical Ontology Model},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper94.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/YaoG11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icbo/ZhengHS11,
author = {Jie Zheng and
Omar S. Harb and
Christian J. Stoeckert Jr.},
editor = {Olivier Bodenreider and
Maryann E. Martone and
Alan Ruttenberg},
title = {Ontology Driven Data Collection for EuPathDB},
booktitle = {Proceedings of the 2nd International Conference on Biomedical Ontology,
Buffalo, NY, USA, July 26-30, 2011},
series = {{CEUR} Workshop Proceedings},
volume = {833},
publisher = {CEUR-WS.org},
year = {2011},
url = {https://ceur-ws.org/Vol-833/paper13.pdf},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icbo/ZhengHS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
retrieved on 2024-10-07 09:07 CEST from data curated by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
