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@article{DBLP:journals/biomedsem/AlghamdiH23,
  author       = {Sarah M. Alghamdi and
                  Robert Hoehndorf},
  title        = {Improving the classification of cardinality phenotypes using collections},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {9},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00290-y},
  doi          = {10.1186/S13326-023-00290-Y},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/AlghamdiH23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/BaserehCB23,
  author       = {Maryam Basereh and
                  Annalina Caputo and
                  Rob Brennan},
  title        = {Automatic transparency evaluation for open knowledge extraction systems},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {12},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00293-9},
  doi          = {10.1186/S13326-023-00293-9},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/BaserehCB23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/BenavidesCSP23,
  author       = {Sara Diaz Benavides and
                  Silvio D. Cardoso and
                  Marcos Da Silveira and
                  C{\'{e}}dric Pruski},
  title        = {Analysis and implementation of the DynDiff tool when comparing versions
                  of ontology},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {15},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00295-7},
  doi          = {10.1186/S13326-023-00295-7},
  timestamp    = {Sun, 12 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biomedsem/BenavidesCSP23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/BernabeQSSMJR23,
  author       = {C{\'{e}}sar Henrique Bernab{\'{e}} and
                  N{\'{u}}ria Queralt{-}Rosinach and
                  V{\'{\i}}tor E. Silva Souza and
                  Luiz Olavo Bonino da Silva Santos and
                  Barend Mons and
                  Annika Jacobsen and
                  Marco Roos},
  title        = {The use of foundational ontologies in biomedical research},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {21},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00300-z},
  doi          = {10.1186/S13326-023-00300-Z},
  timestamp    = {Wed, 03 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biomedsem/BernabeQSSMJR23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/ChanTDMSGVMRMH23,
  author       = {Lauren E. Chan and
                  Anne E. Thessen and
                  William D. Duncan and
                  Nicolas Matentzoglu and
                  Charles Schmitt and
                  Cynthia J. Grondin and
                  Nicole A. Vasilevsky and
                  Julie A. McMurry and
                  Peter N. Robinson and
                  Christopher J. Mungall and
                  Melissa A. Haendel},
  title        = {The Environmental Conditions, Treatments, and Exposures Ontology {(ECTO):}
                  connecting toxicology and exposure to human health and beyond},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {3},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00283-x},
  doi          = {10.1186/S13326-023-00283-X},
  timestamp    = {Thu, 13 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/ChanTDMSGVMRMH23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/DazaAMPCG23,
  author       = {Daniel Daza and
                  Dimitrios Alivanistos and
                  Payal Mitra and
                  Thom Pijnenburg and
                  Michael Cochez and
                  Paul Groth},
  title        = {BioBLP: a modular framework for learning on multimodal biomedical
                  knowledge graphs},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {20},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00301-y},
  doi          = {10.1186/S13326-023-00301-Y},
  timestamp    = {Wed, 03 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biomedsem/DazaAMPCG23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/GaignardRLLD23,
  author       = {Alban Gaignard and
                  Thomas Rosnet and
                  Fr{\'{e}}d{\'{e}}ric de Lamotte and
                  Vincent Lefort and
                  Marie{-}Dominique Devignes},
  title        = {FAIR-Checker: supporting digital resource findability and reuse with
                  Knowledge Graphs and Semantic Web standards},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {7},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00289-5},
  doi          = {10.1186/S13326-023-00289-5},
  timestamp    = {Mon, 07 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/GaignardRLLD23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/JimenoYepesV23,
  author       = {Antonio Jos{\'{e}} Jimeno{-}Yepes and
                  Karin Verspoor},
  title        = {Classifying literature mentions of biological pathogens as experimentally
                  studied using natural language processing},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {1},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00282-y},
  doi          = {10.1186/S13326-023-00282-Y},
  timestamp    = {Tue, 07 Feb 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biomedsem/JimenoYepesV23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/Llanos23,
  author       = {Leonardo Campillos Llanos},
  title        = {MedLexSp - a medical lexicon for Spanish medical natural language
                  processing},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {2},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-022-00281-5},
  doi          = {10.1186/S13326-022-00281-5},
  timestamp    = {Tue, 07 Feb 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biomedsem/Llanos23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/NevesKKRSBBDGKOPSBB23,
  author       = {Mariana L. Neves and
                  Antonina Klippert and
                  Fanny Kn{\"{o}}spel and
                  Juliane Rudeck and
                  Ailine Stolz and
                  Zsofia Ban and
                  Markus Becker and
                  Kai Diederich and
                  Barbara Grune and
                  Pia Kahnau and
                  Nils Ohnesorge and
                  Johannes Pucher and
                  Gilbert Sch{\"{o}}nfelder and
                  Bettina Bert and
                  Daniel Butzke},
  title        = {Automatic classification of experimental models in biomedical literature
                  to support searching for alternative methods to animal experiments},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {13},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00292-w},
  doi          = {10.1186/S13326-023-00292-W},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/NevesKKRSBBDGKOPSBB23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/NunesSP23,
  author       = {Susana Nunes and
                  Rita Torres Sousa and
                  Catia Pesquita},
  title        = {Multi-domain knowledge graph embeddings for gene-disease association
                  prediction},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {11},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00291-x},
  doi          = {10.1186/S13326-023-00291-X},
  timestamp    = {Fri, 25 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/NunesSP23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/PapadopoulouBKTMM23a,
  author       = {Elli Papadopoulou and
                  Alessia Bardi and
                  George Kakaletris and
                  Diamadis Tziotzios and
                  Paolo Manghi and
                  Natalia Manola},
  title        = {Data management plans as linked open data: exploiting {ARGOS} {FAIR}
                  and machine actionable outputs in the OpenAIRE research graph},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {17},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00297-5},
  doi          = {10.1186/S13326-023-00297-5},
  timestamp    = {Tue, 28 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biomedsem/PapadopoulouBKTMM23a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/PennLKAZKST23,
  author       = {Steve Penn and
                  Jane Lomax and
                  Anneli Karlsson and
                  Vincent Antonucci and
                  Carl{-}Dieter Zachmann and
                  Samantha Kanza and
                  Stephan C. Sch{\"{u}}rer and
                  John Turner},
  title        = {An extension of the BioAssay Ontology to include pharmacokinetic/pharmacodynamic
                  terminology for the enrichment of scientific workflows},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {10},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00288-6},
  doi          = {10.1186/S13326-023-00288-6},
  timestamp    = {Thu, 31 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/PennLKAZKST23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/RabbyDODSA23,
  author       = {Gollam Rabby and
                  Jennifer D'Souza and
                  Allard Oelen and
                  Lucie Dvorackova and
                  Vojtech Sv{\'{a}}tek and
                  S{\"{o}}ren Auer},
  title        = {Impact of {COVID-19} research: a study on predicting influential scholarly
                  documents using machine learning and a domain-independent knowledge
                  graph},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {18},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00298-4},
  doi          = {10.1186/S13326-023-00298-4},
  timestamp    = {Wed, 03 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biomedsem/RabbyDODSA23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/RajabiMS23,
  author       = {Enayat Rajabi and
                  Rishi Midha and
                  Jairo Francisco de Souza},
  title        = {Constructing a knowledge graph for open government data: the case
                  of Nova Scotia disease datasets},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {4},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00284-w},
  doi          = {10.1186/S13326-023-00284-W},
  timestamp    = {Sun, 30 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/RajabiMS23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/SeneviratneDCARMFQBCHM23,
  author       = {Oshani Seneviratne and
                  Amar K. Das and
                  Shruthi Chari and
                  Nkechinyere N. Agu and
                  Sabbir M. Rashid and
                  Jamie P. McCusker and
                  Jade S. Franklin and
                  Miao Qi and
                  Kristin P. Bennett and
                  Ching{-}Hua Chen and
                  James A. Hendler and
                  Deborah L. McGuinness},
  title        = {Semantically enabling clinical decision support recommendations},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {8},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00285-9},
  doi          = {10.1186/S13326-023-00285-9},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biomedsem/SeneviratneDCARMFQBCHM23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/XieFZL23,
  author       = {Weixin Xie and
                  Kunjie Fan and
                  Shijun Zhang and
                  Lang Li},
  title        = {Multiple sampling schemes and deep learning improve active learning
                  performance in drug-drug interaction information retrieval analysis
                  from the literature},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {5},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00287-7},
  doi          = {10.1186/S13326-023-00287-7},
  timestamp    = {Mon, 12 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/XieFZL23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/XuJGJPC23,
  author       = {Fuqi Xu and
                  Nick S. Juty and
                  Carole A. Goble and
                  Simon Jupp and
                  Helen E. Parkinson and
                  M{\'{e}}lanie Courtot},
  title        = {Features of a {FAIR} vocabulary},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {6},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00286-8},
  doi          = {10.1186/S13326-023-00286-8},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biomedsem/XuJGJPC23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/YamamotoDR23,
  author       = {Victor Eiti Yamamoto and
                  Juliana Medeiros Destro and
                  J{\'{u}}lio Cesar dos Reis},
  title        = {Context-based refinement of mappings in evolving life science ontologies},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {16},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00294-8},
  doi          = {10.1186/S13326-023-00294-8},
  timestamp    = {Sun, 12 Nov 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biomedsem/YamamotoDR23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/ZayasWSMDB23,
  author       = {Cilia E. Zayas and
                  Justin M. Whorton and
                  Kevin W. Sexton and
                  Charles D. Mabry and
                  S. Clint Dowland and
                  Mathias Brochhausen},
  title        = {Development and validation of the early warning system scores ontology},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {14},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00296-6},
  doi          = {10.1186/S13326-023-00296-6},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biomedsem/ZayasWSMDB23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biomedsem/ZhangBC23,
  author       = {Shuxin Zhang and
                  Nirupama Benis and
                  Ronald Cornet},
  title        = {Assessing resolvability, parsability, and consistency of {RDF} resources:
                  a use case in rare diseases},
  journal      = {J. Biomed. Semant.},
  volume       = {14},
  number       = {1},
  pages        = {19},
  year         = {2023},
  url          = {https://doi.org/10.1186/s13326-023-00299-3},
  doi          = {10.1186/S13326-023-00299-3},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biomedsem/ZhangBC23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}