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@article{DBLP:journals/bib/AgamahMHBTGC20,
author = {Francis E. Agamah and
Gaston K. Mazandu and
Radia Hassan and
Christian D. Bope and
Nicholas E. Thomford and
Anita Ghansah and
Emile R. Chimusa},
title = {Computational/in silico methods in drug target and lead prediction},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1663--1675},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz103},
doi = {10.1093/BIB/BBZ103},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/AgamahMHBTGC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/AhmedATSEEHMF20,
author = {Azza E. Ahmed and
Ayah A Awadallah and
Mawada Tagelsir and
Maram A Suliman and
Atheer Eltigani and
Hassan Elsafi and
Basil D. Hamdelnile and
Mohamed A Mukhtar and
Faisal M. Fadlelmola},
title = {Delivering blended bioinformatics training in resource-limited settings:
a case study on the University of Khartoum H3ABioNet node},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {719--728},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz004},
doi = {10.1093/BIB/BBZ004},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/AhmedATSEEHMF20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/AlnasirS20,
author = {Jamie J. Alnasir and
Hugh P. Shanahan},
title = {The application of Hadoop in structural bioinformatics},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {96--105},
year = {2020},
url = {https://doi.org/10.1093/bib/bby106},
doi = {10.1093/BIB/BBY106},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/AlnasirS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/AnWCLLWXSZ20,
author = {Yunxia An and
Nan Wei and
Xiangsong Cheng and
Ying Li and
Haiyang Liu and
Jia Wang and
Zhiwei Xu and
Zhifu Sun and
Xiaoju Zhang},
title = {{MCAM} abnormal expression and clinical outcome associations are highly
cancer dependent as revealed through pan-cancer analysis},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {709--718},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz019},
doi = {10.1093/BIB/BBZ019},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/AnWCLLWXSZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/AylingCL20,
author = {Martin Ayling and
Matthew D. Clark and
Richard M. Leggett},
title = {New approaches for metagenome assembly with short reads},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {584--594},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz020},
doi = {10.1093/BIB/BBZ020},
timestamp = {Fri, 14 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/AylingCL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/BaiZCZRZ20,
author = {Wei{-}Yang Bai and
Xiao{-}Wei Zhu and
Pei{-}Kuan Cong and
Xue{-}Jun Zhang and
J. Brent Richards and
Hou{-}Feng Zheng},
title = {Genotype imputation and reference panel: a systematic evaluation on
haplotype size and diversity},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1806--1817},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz108},
doi = {10.1093/BIB/BBZ108},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/BaiZCZRZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/BaoZYFZSZ20,
author = {Siqi Bao and
Hengqiang Zhao and
Jian Yuan and
Dandan Fan and
Zicheng Zhang and
Jianzhong Su and
Meng Zhou},
title = {Computational identification of mutator-derived lncRNA signatures
of genome instability for improving the clinical outcome of cancers:
a case study in breast cancer},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1742--1755},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz118},
doi = {10.1093/BIB/BBZ118},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/BaoZYFZSZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/BellaFCAIFPB20,
author = {Sebastiano Di Bella and
Alessandro La Ferlita and
Giovanni Carapezza and
Salvatore Alaimo and
Antonella Isacchi and
Alfredo Ferro and
Alfredo Pulvirenti and
Roberta Bosotti},
title = {A benchmarking of pipelines for detecting ncRNAs from RNA-Seq data},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {1987--1998},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz110},
doi = {10.1093/BIB/BBZ110},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/BellaFCAIFPB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/BinBBBS20,
author = {Riccardo De Bin and
Anne{-}Laure Boulesteix and
Axel Benner and
Natalia Becker and
Willi Sauerbrei},
title = {Combining clinical and molecular data in regression prediction models:
insights from a simulation study},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {1904--1919},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz136},
doi = {10.1093/BIB/BBZ136},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/BinBBBS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/BrianeVK20,
author = {Vincent Briane and
Myriam Vimond and
Charles Kervrann},
title = {An overview of diffusion models for intracellular dynamics analysis},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1136--1150},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz052},
doi = {10.1093/BIB/BBZ052},
timestamp = {Sun, 11 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/BrianeVK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/BrinsterSB20,
author = {Regina Brinster and
Dominique Scherer and
Justo Lorenzo Bermejo},
title = {Optimal selection of genetic variants for adjustment of population
stratification in European association studies},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {753--761},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz023},
doi = {10.1093/BIB/BBZ023},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/BrinsterSB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/CacciabueCCKG20,
author = {Marco Cacciabue and
Anabella Curr{\'{a}} and
Elisa Carrillo and
Guido K{\"{o}}nig and
Mar{\'{\i}}a In{\'{e}}s Gismondi},
title = {A beginner's guide for {FMDV} quasispecies analysis: sub-consensus
variant detection and haplotype reconstruction using next-generation
sequencing},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1766--1775},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz086},
doi = {10.1093/BIB/BBZ086},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/CacciabueCCKG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/CaoCYS20,
author = {Man Cao and
Guodong Chen and
Jialin Yu and
Shaoping Shi},
title = {Computational prediction and analysis of species-specific fungi phosphorylation
via feature optimization strategy},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {595--608},
year = {2020},
url = {https://doi.org/10.1093/bib/bby122},
doi = {10.1093/BIB/BBY122},
timestamp = {Tue, 22 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/CaoCYS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChattopadhyayIE20,
author = {Ansuman Chattopadhyay and
Carrie L. Iwema and
Barbara A Epstein and
Adrian V. Lee and
Arthur S. Levine},
title = {Molecular Biology Information Service: an innovative medical library-based
bioinformatics support service for biomedical researchers},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {876--884},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz035},
doi = {10.1093/BIB/BBZ035},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ChattopadhyayIE20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChauvelNVRB20,
author = {Cecile Chauvel and
Alexei Novoloaca and
Pierre Veyre and
Fr{\'{e}}d{\'{e}}ric Reynier and
Jeremie Becker},
title = {Evaluation of integrative clustering methods for the analysis of multi-omics
data},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {541--552},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz015},
doi = {10.1093/BIB/BBZ015},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ChauvelNVRB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChenGSLQ20,
author = {Xing Chen and
Na{-}Na Guan and
Ya{-}Zhou Sun and
Jian{-}Qiang Li and
Jia Qu},
title = {MicroRNA-small molecule association identification: from experimental
results to computational models},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {47--61},
year = {2020},
url = {https://doi.org/10.1093/bib/bby098},
doi = {10.1093/BIB/BBY098},
timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/ChenGSLQ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChenJFLYYSW20,
author = {Moliang Chen and
Guoli Ji and
Hongjuan Fu and
Qianmin Lin and
Congting Ye and
Wenbin Ye and
Yaru Su and
Xiaohui Wu},
title = {A survey on identification and quantification of alternative polyadenylation
sites from RNA-seq data},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1261--1276},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz068},
doi = {10.1093/BIB/BBZ068},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ChenJFLYYSW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChenRZYZLZMHM20,
author = {Siyuan Chen and
Chengzhi Ren and
Jingjing Zhai and
Jiantao Yu and
Xuyang Zhao and
Zelong Li and
Ting Zhang and
Wenlong Ma and
Zhaoxue Han and
Chuang Ma},
title = {{CAFU:} a Galaxy framework for exploring unmapped RNA-Seq data},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {676--686},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz018},
doi = {10.1093/BIB/BBZ018},
timestamp = {Sun, 12 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/ChenRZYZLZMHM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChenYDTH20,
author = {Fu Chen and
Le Yuan and
Shaozhen Ding and
Yu Tian and
Qian{-}Nan Hu},
title = {Data-driven rational biosynthesis design: from molecules to cell factories},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1238--1248},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz065},
doi = {10.1093/BIB/BBZ065},
timestamp = {Tue, 14 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/ChenYDTH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChenZJLLZHHLB20,
author = {Hebing Chen and
Zhuo Zhang and
Shuai Jiang and
Ruijiang Li and
Wanying Li and
Chenghui Zhao and
Hao Hong and
Xin Huang and
Hao Li and
Xiaochen Bo},
title = {New insights on human essential genes based on integrated analysis
and the construction of the {HEGIAP} web-based platform},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1397--1410},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz072},
doi = {10.1093/BIB/BBZ072},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ChenZJLLZHHLB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChenZLMLRZPAWCS20,
author = {Zhen Chen and
Pei Zhao and
Fuyi Li and
Tatiana T. Marquez{-}Lago and
Andr{\'{e}} Leier and
Jerico Nico De Leon Revote and
Yan Zhu and
David R. Powell and
Tatsuya Akutsu and
Geoffrey I. Webb and
Kuo{-}Chen Chou and
Alexander Ian Smith and
Roger J. Daly and
Jian Li and
Jiangning Song},
title = {iLearn : an integrated platform and meta-learner for feature engineering,
machine-learning analysis and modeling of DNA, {RNA} and protein sequence
data},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {1047--1057},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz041},
doi = {10.1093/BIB/BBZ041},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ChenZLMLRZPAWCS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChenZLWSWABBS20,
author = {Zhen Chen and
Pei Zhao and
Fuyi Li and
Yanan Wang and
Alexander Ian Smith and
Geoffrey I. Webb and
Tatsuya Akutsu and
Abdelkader Baggag and
Halima Bensmail and
Jiangning Song},
title = {Comprehensive review and assessment of computational methods for predicting
{RNA} post-transcriptional modification sites from {RNA} sequences},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1676--1696},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz112},
doi = {10.1093/BIB/BBZ112},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ChenZLWSWABBS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChengHDWMZQCLKL20,
author = {Shiqiang Cheng and
Bei Han and
Miao Ding and
Yan Wen and
Mei Ma and
Lu Zhang and
Xin Qi and
Bolun Cheng and
Ping Li and
Om Prakash Kafle and
Xiao Liang and
Li Liu and
Yanan Du and
Yan Zhao and
Feng Zhang},
title = {Identifying psychiatric disorder-associated gut microbiota using microbiota-related
gene set enrichment analysis},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {1016--1022},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz034},
doi = {10.1093/BIB/BBZ034},
timestamp = {Tue, 14 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/ChengHDWMZQCLKL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChengLZZYZX20,
author = {Na Cheng and
Menglu Li and
Le Zhao and
Bo Zhang and
Yuhua Yang and
Chun{-}Hou Zheng and
Junfeng Xia},
title = {Comparison and integration of computational methods for deleterious
synonymous mutation prediction},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {970--981},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz047},
doi = {10.1093/BIB/BBZ047},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ChengLZZYZX20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChiSLAPHWW20,
author = {Xu Chi and
Maureen A. Sartor and
Sanghoon Lee and
Meenakshi Anurag and
Snehal Patil and
Pelle Hall and
Matthew Wexler and
Xiao{-}Song Wang},
title = {Universal concept signature analysis: genome-wide quantification of
new biological and pathological functions of genes and pathways},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1717--1732},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz093},
doi = {10.1093/BIB/BBZ093},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/ChiSLAPHWW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChiaraZPHP20,
author = {Matteo Chiara and
Federico Zambelli and
Ernesto Picardi and
David Stephen Horner and
Graziano Pesole},
title = {Critical assessment of bioinformatics methods for the characterization
of pathological repeat expansions with single-molecule sequencing
data},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {1971--1986},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz099},
doi = {10.1093/BIB/BBZ099},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/ChiaraZPHP20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChimusaDTAMAGMM20,
author = {Emile R. Chimusa and
Joel Defo and
Prisca K. Thami and
Denis Awany and
Delesa D. Mulisa and
Imane Allali and
Hassan Ghazal and
Ahmed Moussa and
Gaston K. Mazandu},
title = {Dating admixture events is unsolved problem in multi-way admixed populations},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {144--155},
year = {2020},
url = {https://doi.org/10.1093/bib/bby112},
doi = {10.1093/BIB/BBY112},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ChimusaDTAMAGMM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChiuCGMZHC20,
author = {Yu{-}Chiao Chiu and
Hung{-}I Harry Chen and
Aparna Gorthi and
Milad Mostavi and
Siyuan Zheng and
Yufei Huang and
Yidong Chen},
title = {Deep learning of pharmacogenomics resources: moving towards precision
oncology},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2066--2083},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz144},
doi = {10.1093/BIB/BBZ144},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/ChiuCGMZHC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChuBZZMZFY20,
author = {Qinjie Chu and
Panpan Bai and
Xintian Zhu and
Xingchen Zhang and
Lingfeng Mao and
Qian{-}Hao Zhu and
Longjiang Fan and
Chu{-}Yu Ye},
title = {Characteristics of plant circular RNAs},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {135--143},
year = {2020},
url = {https://doi.org/10.1093/bib/bby111},
doi = {10.1093/BIB/BBY111},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ChuBZZMZFY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ChungKWLH20,
author = {Chia{-}Ru Chung and
Ting{-}Rung Kuo and
Li{-}Ching Wu and
Tzong{-}Yi Lee and
Jorng{-}Tzong Horng},
title = {Characterization and identification of antimicrobial peptides with
different functional activities},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {1098--1114},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz043},
doi = {10.1093/BIB/BBZ043},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ChungKWLH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/CinarogluT20,
author = {S{\"{u}}leyman Selim {\c{C}}inaroglu and
Emel Timu{\c{c}}in},
title = {Comprehensive evaluation of the {MM-GBSA} method on bromodomain-inhibitor
sets},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2112--2125},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz143},
doi = {10.1093/BIB/BBZ143},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/CinarogluT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/CirenajwisLPVS20,
author = {Helena Cirenajwis and
Martin Lauss and
Maria Planck and
Johan Vallon{-}Christersson and
Johan Staaf},
title = {Performance of gene expression-based single sample predictors for
assessment of clinicopathological subgroups and molecular subtypes
in cancers: a case comparison study in non-small cell lung cancer},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {729--740},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz008},
doi = {10.1093/BIB/BBZ008},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/CirenajwisLPVS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/CuiS20,
author = {Juan Cui and
Jiang Shu},
title = {Circulating microRNA trafficking and regulation: computational principles
and practice},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1313--1326},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz079},
doi = {10.1093/BIB/BBZ079},
timestamp = {Sun, 11 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/CuiS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/DingOLK20,
author = {Pingjian Ding and
Wenjue Ouyang and
Jiawei Luo and
Chee{-}Keong Kwoh},
title = {Heterogeneous information network and its application to human health
and disease},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1327--1346},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz091},
doi = {10.1093/BIB/BBZ091},
timestamp = {Mon, 21 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/DingOLK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/DingWZWZYLBZLGC20,
author = {Yu Ding and
Hong Wang and
Hewei Zheng and
Lianzong Wang and
Guosi Zhang and
Jiaxin Yang and
Xiaoyan Lu and
Yu Bai and
Haotian Zhang and
Jing Li and
Wenyan Gao and
Fukun Chen and
Shui Hu and
Jingqi Wu and
Liangde Xu},
title = {Evaluation of drug efficacy based on the spatial position comparison
of drug-target interaction centers},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {762--776},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz024},
doi = {10.1093/BIB/BBZ024},
timestamp = {Thu, 19 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/DingWZWZYLBZLGC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/DingYMWJ20,
author = {Xiao Ding and
Xuye Yuan and
Longfei Mao and
Aiping Wu and
Taijiao Jiang},
title = {FluReassort: a database for the study of genomic reassortments among
influenza viruses},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2126--2132},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz128},
doi = {10.1093/BIB/BBZ128},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/DingYMWJ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/DongJHWLZG20,
author = {Chuan Dong and
Yan{-}Ting Jin and
Hong{-}Li Hua and
Qing{-}Feng Wen and
Sen Luo and
Wen{-}Xin Zheng and
Feng{-}Biao Guo},
title = {Comprehensive review of the identification of essential genes using
computational methods: focusing on feature implementation and assessment},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {171--181},
year = {2020},
url = {https://doi.org/10.1093/bib/bby116},
doi = {10.1093/BIB/BBY116},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/DongJHWLZG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/DongLXXXSZYTMLZ20,
author = {Qun Dong and
Feng Li and
Yanjun Xu and
Jing Xiao and
Yingqi Xu and
Desi Shang and
Chunlong Zhang and
Haixiu Yang and
Zihan Tian and
Kai Mi and
Xia Li and
Yunpeng Zhang},
title = {RNAactDrug: a comprehensive database of RNAs associated with drug
sensitivity from multi-omics data},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2167--2174},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz142},
doi = {10.1093/BIB/BBZ142},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/DongLXXXSZYTMLZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/DziakCLLJ20,
author = {John J. Dziak and
Donna L. Coffman and
Stephanie T. Lanza and
Runze Li and
Lars S. Jermiin},
title = {Sensitivity and specificity of information criteria},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {553--565},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz016},
doi = {10.1093/BIB/BBZ016},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/DziakCLLJ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/EbrahimpoorSHTG20,
author = {Mitra Ebrahimpoor and
Pietro Spitali and
Kristina M. Hettne and
Roula Tsonaka and
Jelle J. Goeman},
title = {Simultaneous Enrichment Analysis of all Possible Gene-sets: Unifying
Self-Contained and Competitive Methods},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1302--1312},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz074},
doi = {10.1093/BIB/BBZ074},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/EbrahimpoorSHTG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/FabrisPMF20,
author = {Fabio Fabris and
Daniel Palmer and
Jo{\~{a}}o Pedro de Magalh{\~{a}}es and
Alex Alves Freitas},
title = {Comparing enrichment analysis and machine learning for identifying
gene properties that discriminate between gene classes},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {803--814},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz028},
doi = {10.1093/BIB/BBZ028},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/FabrisPMF20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/Fang20,
author = {Jianwen Fang},
title = {A critical review of five machine learning-based algorithms for predicting
protein stability changes upon mutation},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1285--1292},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz071},
doi = {10.1093/BIB/BBZ071},
timestamp = {Sun, 11 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/Fang20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/FerreiraF20,
author = {Jos{\'{e}} A. Ferreira and
Susana Fuentes},
title = {Some comments on certain statistical aspects of the study of the microbiome},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1487--1494},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz077},
doi = {10.1093/BIB/BBZ077},
timestamp = {Sun, 11 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/FerreiraF20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/FrancoVQDF20,
author = {Manuel Franco and
Juana{-}Mar{\'{\i}}a Vivo and
Manuel Quesada{-}Mart{\'{\i}}nez and
Astrid Duque{-}Ramos and
Jesualdo Tom{\'{a}}s Fern{\'{a}}ndez{-}Breis},
title = {Evaluation of ontology structural metrics based on public repository
data},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {473--485},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz009},
doi = {10.1093/BIB/BBZ009},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/FrancoVQDF20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/Freitas20,
author = {Alex Alves Freitas},
title = {Investigating the role of Simpson's paradox in the analysis of top-ranked
features in high-dimensional bioinformatics datasets},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {421--428},
year = {2020},
url = {https://doi.org/10.1093/bib/bby126},
doi = {10.1093/BIB/BBY126},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/Freitas20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/GaoCYQL20,
author = {Yuli Gao and
Guohui Chuai and
Weichuan Yu and
Shen Qu and
Qi Liu},
title = {Data imbalance in {CRISPR} off-target prediction},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1448--1454},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz069},
doi = {10.1093/BIB/BBZ069},
timestamp = {Wed, 18 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/GaoCYQL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/GezaMCM20,
author = {Ephifania Geza and
Nicola J. Mulder and
Emile R. Chimusa and
Gaston K. Mazandu},
title = {{FRANC:} a unified framework for multi-way local ancestry deconvolution
with high density {SNP} data},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1837--1845},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz117},
doi = {10.1093/BIB/BBZ117},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/GezaMCM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/GualaOMS20,
author = {Dimitri Guala and
Christoph Ogris and
Nikola M{\"{u}}ller and
Erik L. L. Sonnhammer},
title = {Genome-wide functional association networks: background, data {\&}
state-of-the-art resources},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1224--1237},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz064},
doi = {10.1093/BIB/BBZ064},
timestamp = {Sun, 11 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/GualaOMS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/GuoZZAC20,
author = {Weifeng Guo and
Shaowu Zhang and
Tao Zeng and
Tatsuya Akutsu and
Luonan Chen},
title = {Network control principles for identifying personalized driver genes
in cancer},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1641--1662},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz089},
doi = {10.1093/BIB/BBZ089},
timestamp = {Thu, 05 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/GuoZZAC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/GuptaB20,
author = {Asmita Gupta and
Manju Bansal},
title = {RNA-mediated translation regulation in viral genomes: computational
advances in the recognition of sequences and structures},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1151--1163},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz054},
doi = {10.1093/BIB/BBZ054},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/GuptaB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/HanXTLQZ20,
author = {Zhijie Han and
Weiwei Xue and
Lin Tao and
Yan Lou and
Yunqing Qiu and
Feng Zhu},
title = {Genome-wide identification and analysis of the eQTL lncRNAs in multiple
sclerosis based on RNA-seq data},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {1023--1037},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz036},
doi = {10.1093/BIB/BBZ036},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/HanXTLQZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/HoCGCWGY20,
author = {Edwin Yu{-}Kiu Ho and
Qin Cao and
Mengting Gu and
Ricky Wai{-}Lun Chan and
Qiong Wu and
Mark Gerstein and
Kevin Y. Yip},
title = {Shaping the nebulous enhancer in the era of high-throughput assays
and genome editing},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {836--850},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz030},
doi = {10.1093/BIB/BBZ030},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/HoCGCWGY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/HokszaGOHS20,
author = {David Hoksza and
Piotr Gawron and
Marek Ostaszewski and
Jan Hasenauer and
Reinhard Schneider},
title = {Closing the gap between formats for storing layout information in
systems biology},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1249--1260},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz067},
doi = {10.1093/BIB/BBZ067},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/HokszaGOHS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/HongLMFZXXTLZ20,
author = {Jiajun Hong and
Yongchao Luo and
Minjie Mou and
Jianbo Fu and
Yang Zhang and
Weiwei Xue and
Tian Xie and
Lin Tao and
Yan Lou and
Feng Zhu},
title = {Convolutional neural network-based annotation of bacterial type {IV}
secretion system effectors with enhanced accuracy and reduced false
discovery},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1825--1836},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz120},
doi = {10.1093/BIB/BBZ120},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/HongLMFZXXTLZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/HongLZYXXTZ20,
author = {Jiajun Hong and
Yongchao Luo and
Yang Zhang and
Junbiao Ying and
Weiwei Xue and
Tian Xie and
Lin Tao and
Feng Zhu},
title = {Protein functional annotation of simultaneously improved stability,
accuracy and false discovery rate achieved by a sequence-based deep
learning},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1437--1447},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz081},
doi = {10.1093/BIB/BBZ081},
timestamp = {Sun, 12 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/HongLZYXXTZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/HongY20,
author = {Chenyang Hong and
Kevin Y. Yip},
title = {Flexible k-mers with variable-length indels for identifying binding
sequences of protein dimers},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1787--1797},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz101},
doi = {10.1093/BIB/BBZ101},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/HongY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/HuangLLYTH20,
author = {Ming{-}Siang Huang and
Po{-}Ting Lai and
Pei{-}Yen Lin and
Yu{-}Ting You and
Richard Tzong{-}Han Tsai and
Wen{-}Lian Hsu},
title = {Biomedical named entity recognition and linking datasets: survey and
our recent development},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2219--2238},
year = {2020},
url = {https://doi.org/10.1093/bib/bbaa054},
doi = {10.1093/BIB/BBAA054},
timestamp = {Mon, 26 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/HuangLLYTH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/IsonMBJSRLPKCHS20,
author = {Jon C. Ison and
Herv{\'{e}} M{\'{e}}nager and
Bryan Brancotte and
Erik Jaaniso and
Ahto Salumets and
Tom{\'{a}}s Racek and
Anna{-}Lena Lamprecht and
Magnus Palmblad and
Mat{\'{u}}s Kalas and
Piotr Chmura and
John M. Hancock and
Veit Schw{\"{a}}mmle and
Hans{-}Ioan Ienasescu},
title = {Community curation of bioinformatics software and data resources},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1697--1705},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz075},
doi = {10.1093/BIB/BBZ075},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/IsonMBJSRLPKCHS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/KatuwawalaOK20,
author = {Akila Katuwawala and
Christopher J. Oldfield and
Lukasz A. Kurgan},
title = {Accuracy of protein-level disorder predictions},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1509--1522},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz100},
doi = {10.1093/BIB/BBZ100},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/KatuwawalaOK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/KernBHFHMK20,
author = {Fabian Kern and
Christina Backes and
Pascal Hirsch and
Tobias Fehlmann and
Martin Hart and
Eckart Meese and
Andreas Keller},
title = {What's the target: understanding two decades of in silico microRNA-target
prediction},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {1999--2010},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz111},
doi = {10.1093/BIB/BBZ111},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/KernBHFHMK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/KhomtchoukTVMGA20,
author = {Bohdan B. Khomtchouk and
Diem{-}Trang T. Tran and
Kasra A. Vand and
Matthew Might and
Or Gozani and
Themistocles L. Assimes},
title = {Cardioinformatics: the nexus of bioinformatics and precision cardiology},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2031--2051},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz119},
doi = {10.1093/BIB/BBZ119},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/KhomtchoukTVMGA20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/KimCLK20,
author = {Hyung{-}Yong Kim and
Hee{-}Joo Choi and
Jeong{-}Yeon Lee and
Gu Kong},
title = {Cancer Target Gene Screening: a web application for breast cancer
target gene screening using multi-omics data analysis},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {663--675},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz003},
doi = {10.1093/BIB/BBZ003},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/KimCLK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/KunzJFCVFNDD20,
author = {Meik Kunz and
Julian Jeromin and
Maximilian Fuchs and
Jan Christoph and
Giulia Veronesi and
Michael Flentje and
Sarah Nietzer and
Gudrun Dandekar and
Thomas Dandekar},
title = {In silico signaling modeling to understand cancer pathways and treatment
responses},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {1115--1117},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz033},
doi = {10.1093/BIB/BBZ033},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/KunzJFCVFNDD20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/KunzWFCXTAPD20,
author = {Meik Kunz and
Beat Wolf and
Maximilian Fuchs and
Jan Christoph and
Ke Xiao and
Thomas Thum and
David Atlan and
Hans{-}Ulrich Prokosch and
Thomas Dandekar},
title = {A comprehensive method protocol for annotation and integrated functional
understanding of lncRNAs},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1391--1396},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz066},
doi = {10.1093/BIB/BBZ066},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/KunzWFCXTAPD20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/KuoHTSS20,
author = {Tony C. Y. Kuo and
Masaomi Hatakeyama and
Toshiaki Tameshige and
Kentaro K. Shimizu and
Jun Sese},
title = {Homeolog expression quantification methods for allopolyploids},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {395--407},
year = {2020},
url = {https://doi.org/10.1093/bib/bby121},
doi = {10.1093/BIB/BBY121},
timestamp = {Fri, 14 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/KuoHTSS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LiFMLRJZSWLWLS20,
author = {Fuyi Li and
Cunshuo Fan and
Tatiana T. Marquez{-}Lago and
Andr{\'{e}} Leier and
Jerico Nico De Leon Revote and
Cangzhi Jia and
Yan Zhu and
Alexander Ian Smith and
Geoffrey I. Webb and
Quanzhong Liu and
Leyi Wei and
Jian Li and
Jiangning Song},
title = {{PRISMOID:} a comprehensive 3D structure database for post-translational
modifications and mutations with functional impact},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {1069--1079},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz050},
doi = {10.1093/BIB/BBZ050},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/LiFMLRJZSWLWLS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LiJMFYSIZ20,
author = {Aimin Li and
Peilin Jia and
Saurav Mallik and
Rong Fei and
Hiroki Yoshioka and
Akiko Suzuki and
Junichi Iwata and
Zhongming Zhao},
title = {Critical microRNAs and regulatory motifs in cleft palate identified
by a conserved miRNA-TF-gene network approach in humans and mice},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1465--1478},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz082},
doi = {10.1093/BIB/BBZ082},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/LiJMFYSIZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LiL20,
author = {Chen{-}Chen Li and
Bin Liu},
title = {MotifCNN-fold: protein fold recognition based on fold-specific features
extracted by motif-based convolutional neural networks},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2133--2141},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz133},
doi = {10.1093/BIB/BBZ133},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/LiL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LiLHWFYYLHXJCZ20,
author = {Ying Hong Li and
Xiao Xu Li and
Jiajun Hong and
Yunxia Wang and
Jianbo Fu and
Hong Yang and
Chun Yan Yu and
Feng Cheng Li and
Jie Hu and
Weiwei Xue and
Yu Yang Jiang and
Yu Zong Chen and
Feng Zhu},
title = {Clinical trials, progression-speed differentiating features and swiftness
rule of the innovative targets of first-in-class drugs},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {649--662},
year = {2020},
url = {https://doi.org/10.1093/bib/bby130},
doi = {10.1093/BIB/BBY130},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/LiLHWFYYLHXJCZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LiLZZL20,
author = {Xingyi Li and
Wenkai Li and
Min Zeng and
Ruiqing Zheng and
Min Li},
title = {Network-based methods for predicting essential genes or proteins:
a survey},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {566--583},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz017},
doi = {10.1093/BIB/BBZ017},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/LiLZZL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LiWXDXXLZGLHHLZ20,
author = {Feng Li and
Tan Wu and
Yanjun Xu and
Qun Dong and
Jing Xiao and
Yingqi Xu and
Qian Li and
Chunlong Zhang and
Jianxia Gao and
Liqiu Liu and
Xiaoxu Hu and
Jian Huang and
Xia Li and
Yunpeng Zhang},
title = {A comprehensive overview of oncogenic pathways in human cancer},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {957--969},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz046},
doi = {10.1093/BIB/BBZ046},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/LiWXDXXLZGLHHLZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LiZLCFQLZHANLBH20,
author = {Meng Li and
Jianmei Zhao and
Xuecang Li and
Yang Chen and
Chenchen Feng and
Fengcui Qian and
Yuejuan Liu and
Jian Zhang and
Jianzhong He and
Bo Ai and
Ziyu Ning and
Wei Liu and
Xuefeng Bai and
Xiaole Han and
Zhiyong Wu and
Xiue Xu and
Zhidong Tang and
Qi Pan and
Liyan Xu and
Chunquan Li and
Qiuyu Wang and
Enmin Li},
title = {HiFreSP: {A} novel high-frequency sub-pathway mining approach to identify
robust prognostic gene signatures},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1411--1424},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz078},
doi = {10.1093/BIB/BBZ078},
timestamp = {Fri, 12 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/LiZLCFQLZHANLBH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LiangVH20,
author = {Zhongjie Liang and
Gennady M. Verkhivker and
Guang Hu},
title = {Integration of network models and evolutionary analysis into high-throughput
modeling of protein dynamics and allosteric regulation: theory, tools
and applications},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {815--835},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz029},
doi = {10.1093/BIB/BBZ029},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/LiangVH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LimLJRK20,
author = {Sangsoo Lim and
Sangseon Lee and
Inuk Jung and
SungMin Rhee and
Sun Kim},
title = {Comprehensive and critical evaluation of individualized pathway activity
measurement tools on pan-cancer data},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {36--46},
year = {2020},
url = {https://doi.org/10.1093/bib/bby097},
doi = {10.1093/BIB/BBY097},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/LimLJRK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LimaMCSIATC20,
author = {Leandro Lima and
Camille Marchet and
S{\'{e}}gol{\`{e}}ne Caboche and
Corinne Da Silva and
Benjamin Istace and
Jean{-}Marc Aury and
H{\'{e}}l{\`{e}}ne Touzet and
Rayan Chikhi},
title = {Comparative assessment of long-read error correction software applied
to Nanopore RNA-sequencing data},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1164--1181},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz058},
doi = {10.1093/BIB/BBZ058},
timestamp = {Sun, 11 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/LimaMCSIATC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LinLDWTBLW20,
author = {Kequan Lin and
Lu Li and
Yifei Dai and
Huili Wang and
Shuaishuai Teng and
Xilinqiqige Bao and
Zhi John Lu and
Dong Wang},
title = {A comprehensive evaluation of connectivity methods for {L1000} data},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2194--2205},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz129},
doi = {10.1093/BIB/BBZ129},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/LinLDWTBLW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LinQWHZ20,
author = {Xuan Lin and
Zhe Quan and
Zhi{-}Jie Wang and
Huang Huang and
Xiangxiang Zeng},
title = {A novel molecular representation with BiGRU neural networks for learning
atom},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2099--2111},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz125},
doi = {10.1093/BIB/BBZ125},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/LinQWHZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LiuHG20,
author = {Fei Liu and
Monika Heiner and
David R. Gilbert},
title = {Fuzzy Petri nets for modelling of uncertain biological systems},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {198--210},
year = {2020},
url = {https://doi.org/10.1093/bib/bby118},
doi = {10.1093/BIB/BBY118},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/LiuHG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LiuHLLRZZ20,
author = {Xiangrong Liu and
Zengyan Hong and
Juan Liu and
Yuan Lin and
Alfonso Rodr{\'{\i}}guez{-}Pat{\'{o}}n and
Quan Zou and
Xiangxiang Zeng},
title = {Computational methods for identifying the critical nodes in biological
networks},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {486--497},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz011},
doi = {10.1093/BIB/BBZ011},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/LiuHLLRZZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LiuJZ20,
author = {Bin Liu and
Shuangyan Jiang and
Quan Zou},
title = {HITS-PR-HHblits: protein remote homology detection by combining PageRank
and Hyperlink-Induced Topic Search},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {298--308},
year = {2020},
url = {https://doi.org/10.1093/bib/bby104},
doi = {10.1093/BIB/BBY104},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/LiuJZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LiuL20,
author = {Hui{-}Fang Liu and
Rong Liu},
title = {Structure-based prediction of post-translational modification cross-talk
within proteins using complementary residue- and residue pair-based
features},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {609--620},
year = {2020},
url = {https://doi.org/10.1093/bib/bby123},
doi = {10.1093/BIB/BBY123},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/LiuL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LiuLY20,
author = {Bin Liu and
Chen{-}Chen Li and
Ke Yan},
title = {DeepSVM-fold: protein fold recognition by combining support vector
machines and pairwise sequence similarity scores generated by deep
learning networks},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1733--1741},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz098},
doi = {10.1093/BIB/BBZ098},
timestamp = {Mon, 13 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/LiuLY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LiuPVJABGTFMKMS20,
author = {Andrew C. Liu and
Krishna Patel and
Ramya Dhatri Vunikili and
Kipp W. Johnson and
Fahad Abdu and
Shivani Kamath Belman and
Benjamin S. Glicksberg and
Pratyush Tandale and
Roberto Fontanez and
Oommen K. Mathew and
Andrew Kasarskis and
Priyabrata Mukherjee and
Lakshminarayanan Subramanian and
Joel T. Dudley and
Khader Shameer},
title = {Sepsis in the era of data-driven medicine: personalizing risks, diagnoses,
treatments and prognoses},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1182--1195},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz059},
doi = {10.1093/BIB/BBZ059},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/LiuPVJABGTFMKMS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LiuZY20,
author = {Bin Liu and
Yulin Zhu and
Ke Yan},
title = {Fold-LTR-TCP: protein fold recognition based on triadic closure principle},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2185--2193},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz139},
doi = {10.1093/BIB/BBZ139},
timestamp = {Mon, 13 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/LiuZY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LvLHYZWG20,
author = {Yao Lv and
Sheng{-}Yan Lin and
Fei{-}Fei Hu and
Zheng Ye and
Qiong Zhang and
Yan Wang and
An{-}Yuan Guo},
title = {Landscape of cancer diagnostic biomarkers from specifically expressed
genes},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2175--2184},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz131},
doi = {10.1093/BIB/BBZ131},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/LvLHYZWG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/LvZLTCL20,
author = {Hao Lv and
Zi{-}Mei Zhang and
Shi{-}Hao Li and
Jiu{-}Xin Tan and
Wei Chen and
Hao Lin},
title = {Evaluation of different computational methods on 5-methylcytosine
sites identification},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {982--995},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz048},
doi = {10.1093/BIB/BBZ048},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/LvZLTCL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/MaMWTWX20,
author = {Xiaoxia Ma and
Yijun Meng and
Pu Wang and
Zhonghai Tang and
Huizhong Wang and
Tian Xie},
title = {Bioinformatics-assisted, integrated omics studies on medicinal plants},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {1857--1874},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz132},
doi = {10.1093/BIB/BBZ132},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/MaMWTWX20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/MallikZ20,
author = {Saurav Mallik and
Zhongming Zhao},
title = {Graph- and rule-based learning algorithms: a comprehensive review
of their applications for cancer type classification and prognosis
using genomic data},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {368--394},
year = {2020},
url = {https://doi.org/10.1093/bib/bby120},
doi = {10.1093/BIB/BBY120},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/MallikZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/MathaiCK20,
author = {Neann Mathai and
Ya Chen and
Johannes Kirchmair},
title = {Validation strategies for target prediction methods},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {791--802},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz026},
doi = {10.1093/BIB/BBZ026},
timestamp = {Wed, 02 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/MathaiCK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/McCabeLL20,
author = {Sean D. McCabe and
Dan{-}Yu Lin and
Michael I. Love},
title = {Consistency and overfitting of multi-omics methods on experimental
data},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1277--1284},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz070},
doi = {10.1093/BIB/BBZ070},
timestamp = {Thu, 17 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/McCabeLL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/MehmoodLVMWE20,
author = {Arfa Mehmood and
Asta Laiho and
Mikko S. Ven{\"{a}}l{\"{a}}inen and
Aidan J. McGlinchey and
Ning Wang and
Laura L. Elo},
title = {Systematic evaluation of differential splicing tools for RNA-seq studies},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2052--2065},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz126},
doi = {10.1093/BIB/BBZ126},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/MehmoodLVMWE20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/MeiLLMGCASLRPS20,
author = {Shutao Mei and
Fuyi Li and
Andr{\'{e}} Leier and
Tatiana T. Marquez{-}Lago and
Kailin Giam and
Nathan P. Croft and
Tatsuya Akutsu and
Alexander Ian Smith and
Jian Li and
Jamie Rossjohn and
Anthony W. Purcell and
Jiangning Song},
title = {A comprehensive review and performance evaluation of bioinformatics
tools for {HLA} class {I} peptide-binding prediction},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1119--1135},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz051},
doi = {10.1093/BIB/BBZ051},
timestamp = {Thu, 16 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/MeiLLMGCASLRPS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/MierPTPHUGPGBGO20,
author = {Pablo Mier and
Lisanna Paladin and
Stella Tamana and
Sophia Petrosian and
Borb{\'{a}}la Hajdu{-}Solt{\'{e}}sz and
Annika Urbanek and
Aleksandra Gruca and
Dariusz Plewczynski and
Marcin Grynberg and
Pau Bernad{\'{o}} and
Zolt{\'{a}}n G{\'{a}}sp{\'{a}}ri and
Christos A. Ouzounis and
Vasilis J. Promponas and
Andrey V. Kajava and
John M. Hancock and
Silvio C. E. Tosatto and
Zsuzsanna Doszt{\'{a}}nyi and
Miguel A. Andrade{-}Navarro},
title = {Disentangling the complexity of low complexity proteins},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {458--472},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz007},
doi = {10.1093/BIB/BBZ007},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/MierPTPHUGPGBGO20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/Mora20,
author = {Antonio Mora},
title = {Gene set analysis methods for the functional interpretation of non-mRNA
data - Genomic range and ncRNA data},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1495--1508},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz090},
doi = {10.1093/BIB/BBZ090},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/Mora20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/NathGH20,
author = {Aritro Nath and
Paul Geeleher and
Rong Stephanie Huang},
title = {Long non-coding {RNA} transcriptome of uncharacterized samples can
be accurately imputed using protein-coding genes},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {637--648},
year = {2020},
url = {https://doi.org/10.1093/bib/bby129},
doi = {10.1093/BIB/BBY129},
timestamp = {Thu, 25 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/NathGH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/NormanABCKKK20,
author = {Richard A. Norman and
Francesco Ambrosetti and
Alexandre M. J. J. Bonvin and
Lucy J. Colwell and
Sebastian Kelm and
Sandeep Kumar and
Konrad Krawczyk},
title = {Computational approaches to therapeutic antibody design: established
methods and emerging trends},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1549--1567},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz095},
doi = {10.1093/BIB/BBZ095},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/NormanABCKKK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/OmonyNG20,
author = {Jimmy Omony and
Thomas Nussbaumer and
Ruben Gutzat},
title = {{DNA} methylation analysis in plants: review of computational tools
and future perspectives},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {906--918},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz039},
doi = {10.1093/BIB/BBZ039},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/OmonyNG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/PaananenF20,
author = {Jussi Paananen and
Vittorio Fortino},
title = {An omics perspective on drug target discovery platforms},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {1937--1953},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz122},
doi = {10.1093/BIB/BBZ122},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/PaananenF20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/PapachristouB20,
author = {Charalampos Papachristou and
Swati Biswas},
title = {Comparison of haplotype-based tests for detecting gene-environment
interactions with rare variants},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {851--862},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz031},
doi = {10.1093/BIB/BBZ031},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/PapachristouB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/PetegrossoLK20,
author = {Raphael Petegrosso and
Zhuliu Li and
Rui Kuang},
title = {Machine learning and statistical methods for clustering single-cell
RNA-sequencing data},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1209--1223},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz063},
doi = {10.1093/BIB/BBZ063},
timestamp = {Sun, 11 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/PetegrossoLK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/PianZGFL20,
author = {Cong Pian and
Guang{-}Le Zhang and
Libin Gao and
Xiaodan Fan and
Fei Li},
title = {miR+Pathway: the integration and visualization of miRNA and {KEGG}
pathways},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {699--708},
year = {2020},
url = {https://doi.org/10.1093/bib/bby128},
doi = {10.1093/BIB/BBY128},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/PianZGFL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/Pierre-JeanDFM20,
author = {Morgane Pierre{-}Jean and
Jean{-}Francois Deleuze and
Edith Le Floch and
Florence Mauger},
title = {Clustering and variable selection evaluation of 13 unsupervised methods
for multi-omics data integration},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2011--2030},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz138},
doi = {10.1093/BIB/BBZ138},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/Pierre-JeanDFM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/PingOYNCYKSICZG20,
author = {Jie Ping and
Olufunmilola Oyebamiji and
Hui Yu and
Scott Ness and
Jeremy Chien and
Fei Ye and
Huining Kang and
David C. Samuels and
Sergey Ivanov and
Danqian Chen and
Ying{-}Yong Zhao and
Yan Guo},
title = {MutEx: a multifaceted gateway for exploring integrative pan-cancer
genomic data},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1479--1486},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz084},
doi = {10.1093/BIB/BBZ084},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/PingOYNCYKSICZG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/PiteaKSTMU20,
author = {Adriana Pitea and
Ivan Kondofersky and
Steffen Sass and
Fabian J. Theis and
Nikola S. M{\"{u}}ller and
Kristian Unger},
title = {Copy number aberrations from Affymetrix {SNP} 6.0 genotyping data
- how accurate are commonly used prediction approaches?},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {272--281},
year = {2020},
url = {https://doi.org/10.1093/bib/bby096},
doi = {10.1093/BIB/BBY096},
timestamp = {Fri, 14 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/PiteaKSTMU20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/PreteFL20,
author = {Eugenio Del Prete and
Angelo M. Facchiano and
Pietro Li{\`{o}}},
title = {Bioinformatics methodologies for coeliac disease and its comorbidities},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {355--367},
year = {2020},
url = {https://doi.org/10.1093/bib/bby109},
doi = {10.1093/BIB/BBY109},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/PreteFL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/PuYLTGZFXSLYZCC20,
author = {Juncai Pu and
Yue Yu and
Yiyun Liu and
Lu Tian and
Siwen Gui and
Xiaogang Zhong and
Chu Fan and
Shaohua Xu and
Xuemian Song and
Lanxiang Liu and
Lining Yang and
Peng Zheng and
Jianjun Chen and
Ke Cheng and
Chanjuan Zhou and
Haiyang Wang and
Peng Xie},
title = {{MENDA:} a comprehensive curated resource of metabolic characterization
in depression},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1455--1464},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz055},
doi = {10.1093/BIB/BBZ055},
timestamp = {Fri, 14 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/PuYLTGZFXSLYZCC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/QiLCS20,
author = {Xin Qi and
Yuxin Lin and
Jiajia Chen and
Bairong Shen},
title = {Decoding competing endogenous {RNA} networks for cancer biomarker
discovery},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {441--457},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz006},
doi = {10.1093/BIB/BBZ006},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/QiLCS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/QiMMZ20,
author = {Ren Qi and
Anjun Ma and
Qin Ma and
Quan Zou},
title = {Clustering and classification methods for single-cell RNA-sequencing
data},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1196--1208},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz062},
doi = {10.1093/BIB/BBZ062},
timestamp = {Thu, 15 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/QiMMZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/QiangZYDSW20,
author = {Xiaoli Qiang and
Chen Zhou and
Xiucai Ye and
Pufeng Du and
Ran Su and
Leyi Wei},
title = {CPPred-FL: a sequence-based predictor for large-scale identification
of cell-penetrating peptides by feature representation learning},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {11--23},
year = {2020},
url = {https://doi.org/10.1093/bib/bby091},
doi = {10.1093/BIB/BBY091},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/QiangZYDSW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/QinLLPG20,
author = {Liu Qin and
Yanhong Liu and
Menglong Li and
Xuemei Pu and
Yanzhi Guo},
title = {The landscape of miRNA-related ceRNA networks for marking different
renal cell carcinoma subtypes},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {73--84},
year = {2020},
url = {https://doi.org/10.1093/bib/bby101},
doi = {10.1093/BIB/BBY101},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/QinLLPG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/RaoZZSW20,
author = {Bing Rao and
Chen Zhou and
Guoying Zhang and
Ran Su and
Leyi Wei},
title = {ACPred-Fuse: fusing multi-view information improves the prediction
of anticancer peptides},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1846--1855},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz088},
doi = {10.1093/BIB/BBZ088},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/RaoZZSW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ReadATA20,
author = {Mark N. Read and
Kieran Alden and
Jon Timmis and
Paul S. Andrews},
title = {Strategies for calibrating models of biology},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {24--35},
year = {2020},
url = {https://doi.org/10.1093/bib/bby092},
doi = {10.1093/BIB/BBY092},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ReadATA20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/RentzschDNR20,
author = {Robert Rentzsch and
Carlus Deneke and
Andreas Nitsche and
Bernhard Y. Renard},
title = {Predicting bacterial virulence factors - evaluation of machine learning
and negative data strategies},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1596--1608},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz076},
doi = {10.1093/BIB/BBZ076},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/RentzschDNR20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/RuanYF20,
author = {Zhi Ruan and
Yunsong Yu and
Ye Feng},
title = {The global dissemination of bacterial infections necessitates the
study of reverse genomic epidemiology},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {741--750},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz010},
doi = {10.1093/BIB/BBZ010},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/RuanYF20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SalunkheCCDD20,
author = {Sameer Salunkhe and
Naren Chandran and
Pratik Chandrani and
Amit Dutt and
Shilpee Dutt},
title = {CytoPred: 7-gene pair metric for {AML} cytogenetic risk prediction},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {348--354},
year = {2020},
url = {https://doi.org/10.1093/bib/bby100},
doi = {10.1093/BIB/BBY100},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/SalunkheCCDD20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SalvatoreRGFDHG20,
author = {Stefania Salvatore and
Knut Dagestad Rand and
Ivar Grytten and
Egil Ferkingstad and
Diana Domanska and
Lars Holden and
Marius Gheorghe and
Anthony Mathelier and
Ingrid Kristine Glad and
Geir Kjetil Sandve},
title = {Beware the Jaccard: the choice of similarity measure is important
and non-trivial in genomic colocalisation analysis},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1523--1530},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz083},
doi = {10.1093/BIB/BBZ083},
timestamp = {Wed, 08 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/SalvatoreRGFDHG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/Sathyanarayanan20,
author = {Anita Sathyanarayanan and
Rohit Gupta and
Erik W. Thompson and
Dale R. Nyholt and
Denis C. Bauer and
Shivashankar H. Nagaraj},
title = {A comparative study of multi-omics integration tools for cancer driver
gene identification and tumour subtyping},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {1920--1936},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz121},
doi = {10.1093/BIB/BBZ121},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/Sathyanarayanan20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ShenDTZG20,
author = {Yinan Shen and
Yijie Ding and
Jijun Tang and
Quan Zou and
Fei Guo},
title = {Critical evaluation of web-based prediction tools for human protein
subcellular localization},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1628--1640},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz106},
doi = {10.1093/BIB/BBZ106},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ShenDTZG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ShenLZ20,
author = {Zijie Shen and
Yuan Lin and
Quan Zou},
title = {Transcription factors-DNA interactions in rice: identification and
verification},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {946--956},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz045},
doi = {10.1093/BIB/BBZ045},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ShenLZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ShenWYLLWXZLH20,
author = {Chao Shen and
Zhe Wang and
Xiaojun Yao and
Youyong Li and
Tailong Lei and
Ercheng Wang and
Lei Xu and
Feng Zhu and
Dan Li and
Tingjun Hou},
title = {Comprehensive assessment of nine docking programs on type {II} kinase
inhibitors: prediction accuracy of sampling power, scoring power and
screening power},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {282--297},
year = {2020},
url = {https://doi.org/10.1093/bib/bby103},
doi = {10.1093/BIB/BBY103},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ShenWYLLWXZLH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ShengSYNZG20,
author = {Quanhu Sheng and
David C. Samuels and
Hui Yu and
Scott Ness and
Ying{-}Yong Zhao and
Yan Guo},
title = {Cancer-specific expression quantitative loci are affected by expression
dysregulation},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {338--347},
year = {2020},
url = {https://doi.org/10.1093/bib/bby108},
doi = {10.1093/BIB/BBY108},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ShengSYNZG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ShiTCCL20,
author = {Jifan Shi and
Andrew E. Teschendorff and
Weiyan Chen and
Luonan Chen and
Tiejun Li},
title = {Quantifying Waddington's epigenetic landscape: a comparison of single-cell
potency measures},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {248--261},
year = {2020},
url = {https://doi.org/10.1093/bib/bby093},
doi = {10.1093/BIB/BBY093},
timestamp = {Fri, 14 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ShiTCCL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SiebenhallerNMB20,
author = {Martin Siebenhaller and
Sune S. Nielsen and
Fintan McGee and
Irina Balaur and
Charles Auffray and
Alexander Mazein},
title = {Human-like layout algorithms for signalling hypergraphs: outlining
requirements},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {62--72},
year = {2020},
url = {https://doi.org/10.1093/bib/bby099},
doi = {10.1093/BIB/BBY099},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/SiebenhallerNMB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SimoniVPM20,
author = {Giulia Simoni and
Vo Hong Thanh and
Corrado Priami and
Luca Marchetti},
title = {A comparison of deterministic and stochastic approaches for sensitivity
analysis in computational systems biology},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {527--540},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz014},
doi = {10.1093/BIB/BBZ014},
timestamp = {Wed, 09 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/SimoniVPM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/StockPAWB20,
author = {Michiel Stock and
Tapio Pahikkala and
Antti Airola and
Willem Waegeman and
Bernard De Baets},
title = {Algebraic shortcuts for leave-one-out cross-validation in supervised
network inference},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {262--271},
year = {2020},
url = {https://doi.org/10.1093/bib/bby095},
doi = {10.1093/BIB/BBY095},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/StockPAWB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SuHZMW20,
author = {Ran Su and
Jie Hu and
Quan Zou and
Balachandran Manavalan and
Leyi Wei},
title = {Empirical comparison and analysis of web-based cell-penetrating peptide
prediction tools},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {408--420},
year = {2020},
url = {https://doi.org/10.1093/bib/bby124},
doi = {10.1093/BIB/BBY124},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/SuHZMW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SuLW20,
author = {Ran Su and
Xinyi Liu and
Leyi Wei},
title = {MinE-RFE: determine the optimal subset from {RFE} by minimizing the
subset-accuracy-defined energy},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {687--698},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz021},
doi = {10.1093/BIB/BBZ021},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/SuLW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SuLXW20,
author = {Ran Su and
Xinyi Liu and
Guobao Xiao and
Leyi Wei},
title = {Meta-GDBP: a high-level stacked regression model to improve anticancer
drug response prediction},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {996--1005},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz022},
doi = {10.1093/BIB/BBZ022},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/SuLXW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SuTZCW20,
author = {Chang Su and
Jie Tong and
Yongjun Zhu and
Peng Cui and
Fei Wang},
title = {Network embedding in biomedical data science},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {182--197},
year = {2020},
url = {https://doi.org/10.1093/bib/bby117},
doi = {10.1093/BIB/BBY117},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/SuTZCW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SunC20,
author = {Bo Sun and
Liang Chen},
title = {Quantile regression for challenging cases of eQTL mapping},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1756--1765},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz097},
doi = {10.1093/BIB/BBZ097},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/SunC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SunSCL20,
author = {Jun Sun and
Qianqian Shi and
Xi Chen and
Rong Liu},
title = {Decoding the similarities and specific differences between latent
and active tuberculosis infections based on consistently differential
expression networks},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2084--2098},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz127},
doi = {10.1093/BIB/BBZ127},
timestamp = {Mon, 20 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/SunSCL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SunZGEZW20,
author = {Mengying Sun and
Sendong Zhao and
Coryandar Gilvary and
Olivier Elemento and
Jiayu Zhou and
Fei Wang},
title = {Graph convolutional networks for computational drug development and
discovery},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {919--935},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz042},
doi = {10.1093/BIB/BBZ042},
timestamp = {Thu, 17 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/SunZGEZW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/TangFWLLYCHLCXZ20,
author = {Jing Tang and
Jianbo Fu and
Yunxia Wang and
Bo Li and
Yinghong Li and
Qingxia Yang and
Xuejiao Cui and
Jiajun Hong and
Xiaofeng Li and
Yuzong Chen and
Weiwei Xue and
Feng Zhu},
title = {{ANPELA:} analysis and performance assessment of the label-free quantification
workflow for metaproteomic studies},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {621--636},
year = {2020},
url = {https://doi.org/10.1093/bib/bby127},
doi = {10.1093/BIB/BBY127},
timestamp = {Fri, 29 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/TangFWLLYCHLCXZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/TangLGHLLZYSL20,
author = {Bin Tang and
Bin Li and
Liang{-}Di Gao and
Na He and
Xiao{-}Rong Liu and
Yue{-}Sheng Long and
Yang Zeng and
Yong{-}Hong Yi and
Tao Su and
Wei{-}Ping Liao},
title = {Optimization of in silico tools for predicting genetic variants: individualizing
for genes with molecular sub-regional stratification},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1776--1786},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz115},
doi = {10.1093/BIB/BBZ115},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/TangLGHLLZYSL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/TangWFZLZLYXLQZ20,
author = {Jing Tang and
Yunxia Wang and
Jianbo Fu and
Ying Zhou and
Yongchao Luo and
Ying Zhang and
Bo Li and
Qingxia Yang and
Weiwei Xue and
Yan Lou and
Yunqing Qiu and
Feng Zhu},
title = {A critical assessment of the feature selection methods used for biomarker
discovery in current metaproteomics studies},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1378--1390},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz061},
doi = {10.1093/BIB/BBZ061},
timestamp = {Fri, 03 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/TangWFZLZLYXLQZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/TanoliAIWVA20,
author = {ZiaurRehman Tanoli and
Zaid Alam and
Aleksandr Ianevski and
Krister Wennerberg and
Markus V{\"{a}}h{\"{a}}{-}Koskela and
Tero Aittokallio},
title = {Interactive visual analysis of drug-target interaction networks using
Drug Target Profiler, with applications to precision medicine and
drug repurposing},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {211--220},
year = {2020},
url = {https://doi.org/10.1093/bib/bby119},
doi = {10.1093/BIB/BBY119},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/TanoliAIWVA20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/Tiwary20,
author = {Basant K. Tiwary},
title = {Computational medicine: quantitative modeling of complex diseases},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {429--440},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz005},
doi = {10.1093/BIB/BBZ005},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/Tiwary20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/UllahYH20,
author = {Ehsan Ullah and
Mona Yosafshahi and
Soha Hassoun},
title = {Towards scaling elementary flux mode computation},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {1875--1885},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz094},
doi = {10.1093/BIB/BBZ094},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/UllahYH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/VesteghemBSSSBD20,
author = {Charles Vesteghem and
Rasmus Froberg Br{\o}ndum and
Mads S{\o}nderk{\ae}r and
Mia Sommer and
Alexander Schmitz and
Julie St{\o}ve B{\o}dker and
Karen Dybk{\ae}r and
Tarec Christoffer El{-}Galaly and
Martin B{\o}gsted},
title = {Implementing the {FAIR} Data Principles in precision oncology: review
of supporting initiatives},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {936--945},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz044},
doi = {10.1093/BIB/BBZ044},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/VesteghemBSSSBD20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/WangC20,
author = {Yiwen Wang and
Kim{-}Anh L{\^{e}} Cao},
title = {Managing batch effects in microbiome data},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {1954--1970},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz105},
doi = {10.1093/BIB/BBZ105},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/WangC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/WangCLWLKBLWMLZ20,
author = {Jianjian Wang and
Yuze Cao and
Xiaoyu Lu and
Tianfeng Wang and
Shuang Li and
Xiaotong Kong and
Chunrui Bo and
Jie Li and
Xiaolong Wang and
Heping Ma and
Lei Li and
Huixue Zhang and
Shangwei Ning and
Lihua Wang},
title = {MicroRNAs and nervous system diseases: network insights and computational
challenges},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {863--875},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz032},
doi = {10.1093/BIB/BBZ032},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/WangCLWLKBLWMLZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/WangLCDZWZYBLWZ20,
author = {Hong Wang and
Xiaoyan Lu and
Fukun Chen and
Yu Ding and
Hewei Zheng and
Lianzong Wang and
Guosi Zhang and
Jiaxin Yang and
Yu Bai and
Jing Li and
Jingqi Wu and
Meng Zhou and
Liangde Xu},
title = {Landscape of SNPs-mediated lncRNA structural variations and their
implication in human complex diseases},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {85--95},
year = {2020},
url = {https://doi.org/10.1093/bib/bby102},
doi = {10.1093/BIB/BBY102},
timestamp = {Thu, 19 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/WangLCDZWZYBLWZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/WangWFSZ20,
author = {Ziye Wang and
Ying Wang and
Jed A. Fuhrman and
Fengzhu Sun and
Shanfeng Zhu},
title = {Assessment of metagenomic assemblers based on hybrid reads of real
and simulated metagenomic sequences},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {777--790},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz025},
doi = {10.1093/BIB/BBZ025},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/WangWFSZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/WangXNLLZ20,
author = {Dan Wang and
Hai Xiang and
Chao Ning and
Hao Liu and
Jian{-}Feng Liu and
Xingbo Zhao},
title = {Mitochondrial {DNA} enrichment reduced {NUMT} contamination in porcine
{NGS} analyses},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1368--1377},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz060},
doi = {10.1093/BIB/BBZ060},
timestamp = {Sun, 11 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/WangXNLLZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/WeiHLSSZ20,
author = {Leyi Wei and
Jie Hu and
Fuyi Li and
Jiangning Song and
Ran Su and
Quan Zou},
title = {Comparative analysis and prediction of quorum-sensing peptides using
feature representation learning and machine learning algorithms},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {106--119},
year = {2020},
url = {https://doi.org/10.1093/bib/bby107},
doi = {10.1093/BIB/BBY107},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/WeiHLSSZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/WeiL20,
author = {Hang Wei and
Bin Liu},
title = {iCircDA-MF: identification of circRNA-disease associations based on
matrix factorization},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1356--1367},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz057},
doi = {10.1093/BIB/BBZ057},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/WeiL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/WuLL20,
author = {Zhourun Wu and
Qing Liao and
Bin Liu},
title = {A comprehensive review and evaluation of computational methods for
identifying protein complexes from protein-protein interaction networks},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1531--1548},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz085},
doi = {10.1093/BIB/BBZ085},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/WuLL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/WuWYJWJHY20,
author = {Feng{-}Xu Wu and
Fan Wang and
Jing{-}Fang Yang and
Wen Jiang and
Meng{-}Yao Wang and
Chen{-}Yang Jia and
Ge{-}Fei Hao and
Guangfu Yang},
title = {{AIMMS} suite: a web server dedicated for prediction of drug resistance
on protein mutation},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {318--328},
year = {2020},
url = {https://doi.org/10.1093/bib/bby113},
doi = {10.1093/BIB/BBY113},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/WuWYJWJHY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/X20,
title = {Corrigendum to: Dating admixture events is unsolved problem in multi-way
admixed populations},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {751},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz001},
doi = {10.1093/BIB/BBZ001},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/X20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/X20a,
title = {Corrigendum to: gm {RAD:} an integrated {SNP} calling pipeline for
genetic mapping with RADseq across a hybrid population},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {752},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz002},
doi = {10.1093/BIB/BBZ002},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/X20a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/X20b,
title = {Corrigendum to: Comprehensive and critical evaluation of individualized
pathway activity measurement tools on pan-cancer data},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {1118},
year = {2020},
url = {https://doi.org/10.1093/bib/bby125},
doi = {10.1093/BIB/BBY125},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/X20b.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/XuWLDWSXZDHYZZW20,
author = {Yanjun Xu and
Tan Wu and
Feng Li and
Qun Dong and
Jingwen Wang and
Desi Shang and
Yingqi Xu and
Chunlong Zhang and
Yiying Dou and
Congxue Hu and
Haixiu Yang and
Xuan Zheng and
Yunpeng Zhang and
Lihua Wang and
Xia Li},
title = {Identification and comprehensive characterization of lncRNAs with
copy number variations and their driving transcriptional perturbed
subpathways reveal functional significance for cancer},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2153--2166},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz113},
doi = {10.1093/BIB/BBZ113},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/XuWLDWSXZDHYZZW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/XuZLJQW20,
author = {Tianlei Xu and
Xiaoqi Zheng and
Ben Li and
Peng Jin and
Zhaohui S. Qin and
Hao Wu},
title = {A comprehensive review of computational prediction of genome-wide
features},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {120--134},
year = {2020},
url = {https://doi.org/10.1093/bib/bby110},
doi = {10.1093/BIB/BBY110},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/XuZLJQW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/YakubuC20,
author = {Abukari Mohammed Yakubu and
Yi{-}Ping Phoebe Chen},
title = {Ensuring privacy and security of genomic data and functionalities},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {511--526},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz013},
doi = {10.1093/BIB/BBZ013},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/YakubuC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/YangCHWC20,
author = {Haitao Yang and
Hongyan Cao and
Tao He and
Tong Wang and
Yuehua Cui},
title = {Multilevel heterogeneous omics data integration with kernel fusion},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {156--170},
year = {2020},
url = {https://doi.org/10.1093/bib/bby115},
doi = {10.1093/BIB/BBY115},
timestamp = {Tue, 04 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/YangCHWC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/YangHLXLYZ20,
author = {Qingxia Yang and
Jiajun Hong and
Yi Li and
Weiwei Xue and
Song Li and
Hui Yang and
Feng Zhu},
title = {A novel bioinformatics approach to identify the consistently well-performing
normalization strategy for current metabolomic studies},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2142--2152},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz137},
doi = {10.1093/BIB/BBZ137},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/YangHLXLYZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/YangLTCWLHCXLQZ20,
author = {Qingxia Yang and
Bo Li and
Jing Tang and
Xuejiao Cui and
Yunxia Wang and
Xiaofeng Li and
Jie Hu and
Yuzong Chen and
Weiwei Xue and
Yan Lou and
Yunqing Qiu and
Feng Zhu},
title = {Consistent gene signature of schizophrenia identified by a novel feature
selection strategy from comprehensive sets of transcriptomic data},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {1058--1068},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz049},
doi = {10.1093/BIB/BBZ049},
timestamp = {Fri, 29 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/YangLTCWLHCXLQZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/YangWCHY20,
author = {Jing{-}Fang Yang and
Fan Wang and
Yu Zong Chen and
Ge{-}Fei Hao and
Guangfu Yang},
title = {{LARMD:} integration of bioinformatic resources to profile ligand-driven
protein dynamics with a case on the activation of estrogen receptor},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {2206--2218},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz141},
doi = {10.1093/BIB/BBZ141},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/YangWCHY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/YangYDLDCL20,
author = {Hui Yang and
Wuritu Yang and
Fu{-}Ying Dao and
Hao Lv and
Hui Ding and
Wei Chen and
Hao Lin},
title = {A comparison and assessment of computational method for identifying
recombination hotspots in Saccharomyces cerevisiae},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1568--1580},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz123},
doi = {10.1093/BIB/BBZ123},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/YangYDLDCL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/YangZXHZQXWF20,
author = {Yadong Yang and
Tao Zhang and
Rudan Xiao and
Xiaopeng Hao and
Huiqiang Zhang and
Hongzhu Qu and
Bingbing Xie and
Tao Wang and
Xiangdong Fang},
title = {Platform-independent approach for cancer detection from gene expression
profiles of peripheral blood cells},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {1006--1015},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz027},
doi = {10.1093/BIB/BBZ027},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/YangZXHZQXWF20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/YaoLQWSL20,
author = {Hongcheng Yao and
Qian Liang and
Xinyi Qian and
Junwen Wang and
Pak Chung Sham and
Mulin Jun Li},
title = {Methods and resources to access mutation-dependent effects on cancer
drug treatment},
journal = {Briefings Bioinform.},
volume = {21},
number = {6},
pages = {1886--1903},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz109},
doi = {10.1093/BIB/BBZ109},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/YaoLQWSL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/YaoWCYGT20,
author = {Dan Yao and
Hainan Wu and
Yuhua Chen and
Wenguo Yang and
Hua Gao and
Chunfa Tong},
title = {gmRAD: an integrated {SNP} calling pipeline for genetic mapping with
RADseq across a hybrid population},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {329--337},
year = {2020},
url = {https://doi.org/10.1093/bib/bby114},
doi = {10.1093/BIB/BBY114},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/YaoWCYGT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/YuZLDGZCLL20,
author = {Kai Yu and
Qingfeng Zhang and
Zekun Liu and
Yimeng Du and
Xinjiao Gao and
Qi Zhao and
Han Cheng and
Xiaoxing Li and
Zexian Liu},
title = {Deep learning based prediction of reversible HAT/HDAC-specific lysine
acetylation},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1798--1805},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz107},
doi = {10.1093/BIB/BBZ107},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/YuZLDGZCLL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/YueZX20,
author = {Zhenyu Yue and
Le Zhao and
Junfeng Xia},
title = {dbCPM: a manually curated database for exploring the cancer passenger
mutations},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {309--317},
year = {2020},
url = {https://doi.org/10.1093/bib/bby105},
doi = {10.1093/BIB/BBY105},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/YueZX20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ZeeshanXLA20,
author = {Saman Zeeshan and
Ruoyun Xiong and
Bruce T. Liang and
Zeeshan Ahmed},
title = {100 Years of evolving gene-disease complexities and scientific debutants},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {885--905},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz038},
doi = {10.1093/BIB/BBZ038},
timestamp = {Fri, 28 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ZeeshanXLA20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ZengZLZ20,
author = {Xiangxiang Zeng and
Yue Zhong and
Wei Lin and
Quan Zou},
title = {Predicting disease-associated circular RNAs using deep forests combined
with positive-unlabeled learning methods},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1425--1436},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz080},
doi = {10.1093/BIB/BBZ080},
timestamp = {Thu, 16 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ZengZLZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ZhangGWZZS20,
author = {Ji Zhang and
Meige Guan and
Qianliang Wang and
Jiajun Zhang and
Tianshou Zhou and
Xiaoqiang Sun},
title = {Single-cell transcriptome-based multilayer network biomarker for predicting
prognosis and therapeutic response of gliomas},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {1080--1097},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz040},
doi = {10.1093/BIB/BBZ040},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ZhangGWZZS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ZhangJTLZSFYF20,
author = {Chaodong Zhang and
Yingjiao Ju and
Na Tang and
Yun Li and
Gang Zhang and
Yuqin Song and
Hailing Fang and
Liang Yang and
Jie Feng},
title = {Systematic analysis of supervised machine learning as an effective
approach to predicate {\(\beta\)}-lactam resistance phenotype in Streptococcus
pneumoniae},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1347--1355},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz056},
doi = {10.1093/BIB/BBZ056},
timestamp = {Sun, 11 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ZhangJTLZSFYF20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ZhangLL20,
author = {Tianlin Zhang and
Jiaxu Leng and
Ying Liu},
title = {Deep learning for drug-drug interaction extraction from the literature:
a review},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1609--1627},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz087},
doi = {10.1093/BIB/BBZ087},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/ZhangLL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ZhangMK20,
author = {Jian Zhang and
Zhiqiang Ma and
Lukasz A. Kurgan},
title = {Corrigendum to: Comprehensive review and empirical analysis of hallmarks
of DNA-, {RNA-} and protein-binding residues in protein chains},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1856},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz102},
doi = {10.1093/BIB/BBZ102},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ZhangMK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ZhangYZZWOZZWLZ20,
author = {Yanfang Zhang and
Xiujia Yang and
Yanxia Zhang and
Yan Zhang and
Minhui Wang and
Jin Xia Ou and
Yan Zhu and
Huikun Zeng and
Jiaqi Wu and
Chunhong Lan and
Hong{-}Wei Zhou and
Wei Yang and
Zhenhai Zhang},
title = {Tools for fundamental analysis functions of {TCR} repertoires: a systematic
comparison},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1706--1716},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz092},
doi = {10.1093/BIB/BBZ092},
timestamp = {Fri, 05 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ZhangYZZWOZZWLZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ZhangZZX20,
author = {Sijia Zhang and
Le Zhao and
Chun{-}Hou Zheng and
Junfeng Xia},
title = {A feature-based approach to predict hot spots in protein-DNA binding
interfaces},
journal = {Briefings Bioinform.},
volume = {21},
number = {3},
pages = {1038--1046},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz037},
doi = {10.1093/BIB/BBZ037},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ZhangZZX20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ZhaoSLZLZLRZ20,
author = {Qi Zhao and
Yu Sun and
Zekun Liu and
Hongwan Zhang and
Xingyang Li and
Kaiyu Zhu and
Zexian Liu and
Jian Ren and
Zhixiang Zuo},
title = {CrossICC: iterative consensus clustering of cross-platform gene expression
data without adjusting batch effect},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1818--1824},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz116},
doi = {10.1093/BIB/BBZ116},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ZhaoSLZLZLRZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ZhaoWFSF20,
author = {Xinlei Zhao and
Shuang Wu and
Nan Fang and
Xiao Sun and
Jue Fan},
title = {Evaluation of single-cell classifiers for single-cell {RNA} sequencing
data sets},
journal = {Briefings Bioinform.},
volume = {21},
number = {5},
pages = {1581--1595},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz096},
doi = {10.1093/BIB/BBZ096},
timestamp = {Fri, 25 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/ZhaoWFSF20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ZhengZWDLZYWZBL20,
author = {Hewei Zheng and
Xueying Zhao and
Hong Wang and
Yu Ding and
Xiaoyan Lu and
Guosi Zhang and
Jiaxin Yang and
Lianzong Wang and
Haotian Zhang and
Yu Bai and
Jing Li and
Jingqi Wu and
Yongshuai Jiang and
Liangde Xu},
title = {Location deviations of {DNA} functional elements affected {SNP} mapping
in the published databases and references},
journal = {Briefings Bioinform.},
volume = {21},
number = {4},
pages = {1293--1301},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz073},
doi = {10.1093/BIB/BBZ073},
timestamp = {Thu, 19 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ZhengZWDLZYWZBL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ZhouDSMMJJ20,
author = {Xu Zhou and
Enyu Dai and
Qian Song and
Xueyan Ma and
Qianqian Meng and
Yongshuai Jiang and
Wei Jiang},
title = {In silico drug repositioning based on drug-miRNA associations},
journal = {Briefings Bioinform.},
volume = {21},
number = {2},
pages = {498--510},
year = {2020},
url = {https://doi.org/10.1093/bib/bbz012},
doi = {10.1093/BIB/BBZ012},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ZhouDSMMJJ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ZouLJLZ20,
author = {Quan Zou and
Gang Lin and
Xingpeng Jiang and
Xiangrong Liu and
Xiangxiang Zeng},
title = {Sequence clustering in bioinformatics: an empirical study},
journal = {Briefings Bioinform.},
volume = {21},
number = {1},
pages = {1--10},
year = {2020},
url = {https://doi.org/10.1093/bib/bby090},
doi = {10.1093/BIB/BBY090},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/ZouLJLZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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