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@inproceedings{DBLP:conf/csb/AbelG04,
  author       = {Barrett Abel and
                  Martin Gollery},
  title        = {{BPAP:} {A} Computational Tool for Whole Genome Analysis and Annotation},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {704--705},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332552},
  doi          = {10.1109/CSB.2004.1332552},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/AbelG04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/AdjerohF04,
  author       = {Donald A. Adjeroh and
                  Jianan Feng},
  title        = {Locating All Tandem Repeat Families in a Sequence},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {676--681},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332544},
  doi          = {10.1109/CSB.2004.1332544},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/AdjerohF04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/ArunL04,
  author       = {K. Arun and
                  Christopher James Langmead},
  title        = {Large-Scale Testing of Chemical Shift Prediction Algorithms and Improved
                  Machine Learning-Based Approaches to Shift Prediction},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {712--713},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332556},
  doi          = {10.1109/CSB.2004.1332556},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/ArunL04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/AvihooDB04,
  author       = {Assaf Avihoo and
                  Nir Dromi and
                  Danny Barash},
  title        = {Fine-Grain Matrix Graph Representation for Predicting Mutations Leading
                  to Conformational Rearrangements in Small RNAs},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {724--725},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332559},
  doi          = {10.1109/CSB.2004.1332559},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/AvihooDB04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/BafnaZ04,
  author       = {Vineet Bafna and
                  Shaojie Zhang},
  title        = {FastR: Fast Database Search Tool for Non-Coding {RNA}},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {52--61},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332417},
  doi          = {10.1109/CSB.2004.1332417},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/BafnaZ04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/BarashC04,
  author       = {Danny Barash and
                  Dorin Comaniciu},
  title        = {Meanshift Clustering for {DNA} Microarray Analysis},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {578--579},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332503},
  doi          = {10.1109/CSB.2004.1332503},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/BarashC04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/BarbacioruCS04,
  author       = {Catalin C. Barbacioru and
                  Daniel J. Cowden and
                  Joel H. Saltz},
  title        = {An Algorithm for Reconstruction of Markov Blankets in Bayesian Networks
                  of Gene Expression Datasets},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {628--629},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332522},
  doi          = {10.1109/CSB.2004.1332522},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/BarbacioruCS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/BergerHM04,
  author       = {John A. Berger and
                  Sampsa Hautaniemi and
                  Sanjit K. Mitra},
  title        = {Comparative Analysis of Gene Expression and {DNA} Copy Number Data
                  for Pancreatic and Breast Cancers Using an Orthogonal Decomposition},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {584--585},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332506},
  doi          = {10.1109/CSB.2004.1332506},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/BergerHM04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/BergigBK04,
  author       = {Oriel Bergig and
                  Danny Barash and
                  Klara Kedem},
  title        = {{RNA} Motif Search Using the Structure to String (STR\({}^{\mbox{2}}\))
                  Method},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {660--661},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332536},
  doi          = {10.1109/CSB.2004.1332536},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/BergigBK04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/Bolouri04,
  author       = {Hamid Bolouri},
  title        = {From {DNA} Sequence to Network Behavior: Functional Properties of
                  Genetic Regulatory Networks},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {18},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332412},
  doi          = {10.1109/CSB.2004.1332412},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/Bolouri04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/BoydBPWR04,
  author       = {Sarah E. Boyd and
                  Maria J. Garc{\'{\i}}a de la Banda and
                  Robert N. Pike and
                  James C. Whisstock and
                  George B. Rudy},
  title        = {PoPS: {A} Computational Tool for Modeling and Predicting Protease
                  Specificity},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {372--381},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332450},
  doi          = {10.1109/CSB.2004.1332450},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/BoydBPWR04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/BudagyanL04,
  author       = {Boris Budagyan and
                  Ann E. Loraine},
  title        = {Gene Length and Alternative Transcription in Fruit Fly},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {515--516},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332480},
  doi          = {10.1109/CSB.2004.1332480},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/BudagyanL04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/BuendiaN04,
  author       = {Patricia Buendia and
                  Giri Narasimhan},
  title        = {MinPD: Distance-Based Phylogenetic Analysis and Recombination Detection
                  of Serially-Sampled {HIV} Quasispecies},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {110--119},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332423},
  doi          = {10.1109/CSB.2004.1332423},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/csb/BuendiaN04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/CanCSW04,
  author       = {Tolga Can and
                  Orhan {\c{C}}amoglu and
                  Ambuj K. Singh and
                  Yuan{-}Fang Wang},
  title        = {Automated Protein Classification Using Consensus Decision},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {224--235},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332436},
  doi          = {10.1109/CSB.2004.1332436},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/CanCSW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/CaoTG04,
  author       = {Yinhe Cao and
                  Wen{-}wen Tung and
                  Jianbo Gao},
  title        = {Recurrence Time Statistics: Versatile Tools for Genomic {DNA} Sequence
                  Analysis},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {40--51},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332415},
  doi          = {10.1109/CSB.2004.1332415},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/CaoTG04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/ChangHCCLL04,
  author       = {Chang{-}Heng Chang and
                  Li{-}Ching Hsieh and
                  Ta{-}Yuan Chen and
                  Hong{-}Da Chen and
                  Liaofu Luo and
                  Hoong{-}Chien Lee},
  title        = {Shannon Information in Complete Genomes},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {20--30},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332413},
  doi          = {10.1109/CSB.2004.1332413},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/ChangHCCLL04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/ChenLR04,
  author       = {Lei Chen and
                  Shiyong Lu and
                  Jeffrey L. Ram},
  title        = {Compressed Pattern Matching in {DNA} Sequences},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {62--68},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332418},
  doi          = {10.1109/CSB.2004.1332418},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/ChenLR04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/CrosbyG04,
  author       = {Kevin Crosby and
                  Paula Gabbert},
  title        = {BioSPRINT: Classification of Intron and Exon Sequences Using the {SPRINT}
                  Algorithm},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {668--669},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332540},
  doi          = {10.1109/CSB.2004.1332540},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/CrosbyG04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/CuiWS04,
  author       = {Chenyang Cui and
                  Donghui Wang and
                  Jiaoying Shi},
  title        = {Comparing 3D Protein Structures Similarity by Using Fractal Features},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {698--699},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332549},
  doi          = {10.1109/CSB.2004.1332549},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/CuiWS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/DAntonioB04,
  author       = {Lawrence D'Antonio and
                  Paramjeet Singh Bagga},
  title        = {Computational Methods for Predicting Intramolecular G-Quadruplexes
                  in Nucleotide Sequences},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {590--591},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332508},
  doi          = {10.1109/CSB.2004.1332508},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/DAntonioB04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/DamSOX04,
  author       = {PhuongAn Dam and
                  Zhengchang Su and
                  Victor Olman and
                  Ying Xu},
  title        = {In Silico Construction of the Carbon Fixation Pathway in Synechococcus
                  sp. {WH8102}},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {614--615},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332517},
  doi          = {10.1109/CSB.2004.1332517},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/DamSOX04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/DarlingMCP04,
  author       = {Aaron E. Darling and
                  Bob Mau and
                  Mark Craven and
                  Nicole T. Perna},
  title        = {Multiple Alignment of Rearranged Genomes},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {738--739},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332564},
  doi          = {10.1109/CSB.2004.1332564},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/DarlingMCP04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/DarvishBGZN04,
  author       = {Alireza Darvish and
                  EunSang Bak and
                  Krishna Gopalakrishnan and
                  R. H. Zadeh and
                  Kayvan Najarian},
  title        = {A New Hierarchical Method for Identification of Dynamic Regulatory
                  Pathways from Time-Series {DNA} Microarray Data},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {602--603},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332513},
  doi          = {10.1109/CSB.2004.1332513},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/DarvishBGZN04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/DayBG04,
  author       = {Robert M. Day and
                  Andrey Borziak and
                  Andrey Gorin},
  title        = {PPM-Chain De novo Peptide Identification Program Comparable in Performance
                  to Sequest},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {505--508},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332477},
  doi          = {10.1109/CSB.2004.1332477},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/DayBG04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/DengA04,
  author       = {Xutao Deng and
                  Hesham H. Ali},
  title        = {A Hidden Markov Model for Gene Function Prediction from Sequential
                  Expression Data},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {670--671},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332541},
  doi          = {10.1109/CSB.2004.1332541},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/DengA04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/DeshpandeJWS04,
  author       = {Samir V. Deshpande and
                  Rabih E. Jabbour and
                  Charles Wick and
                  A. Peter Snyder},
  title        = {Automated and Rapid Bacterial Identification Using LC-Mass Spectrometry
                  with a Relational Database Management System},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {472--473},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332463},
  doi          = {10.1109/CSB.2004.1332463},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/DeshpandeJWS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/DhaeseleerC04,
  author       = {Patrik D'haeseleer and
                  George M. Church},
  title        = {Estimating and Improving Protein Interaction Error Rates},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {216--223},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332435},
  doi          = {10.1109/CSB.2004.1332435},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/DhaeseleerC04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/DiaoHZLXWZ04,
  author       = {Qian Diao and
                  Wei Hu and
                  Hao Zhong and
                  Juntao Li and
                  Feng Xue and
                  Tao Wang and
                  Yimin Zhang},
  title        = {Disease Gene Explorer: Display Disease Gene Dependency by Combining
                  Bayesian Networks with Clustering},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {574--575},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332501},
  doi          = {10.1109/CSB.2004.1332501},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/DiaoHZLXWZ04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/DingCW04,
  author       = {Yan Ding and
                  Hong Cao and
                  Shu Wen},
  title        = {VirusFinder: {A} Web-Based Virus Identification System Using Viral
                  Nucleotide Signatures},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {652--653},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332533},
  doi          = {10.1109/CSB.2004.1332533},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/DingCW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/DingMHH04,
  author       = {Chris H. Q. Ding and
                  Richard F. Meraz and
                  Xiaofeng He and
                  Stephen R. Holbrook},
  title        = {Contraction Graphs for Representation and Analysis of {RNA} Secondary
                  Structure},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {716--717},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332557},
  doi          = {10.1109/CSB.2004.1332557},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/DingMHH04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/DongK04,
  author       = {Shiming Dong and
                  Eileen T. Kraemer},
  title        = {Calculation, Visualization, and Manipulation of MASTs (Maximum Agreement
                  Subtrees)},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {405--414},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332453},
  doi          = {10.1109/CSB.2004.1332453},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/DongK04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/DuaK04,
  author       = {Sumeet Dua and
                  Naveen Kandiraju},
  title        = {A Novel Computational Framework for Structural Classification of Proteins
                  Using Local Geometric Parameter Matching},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {710--711},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332555},
  doi          = {10.1109/CSB.2004.1332555},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/DuaK04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/Edgar04,
  author       = {Robert C. Edgar},
  title        = {{MUSCLE:} Multiple Sequence Alignment with Improved Accuracy and Speed},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {728--729},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332560},
  doi          = {10.1109/CSB.2004.1332560},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/Edgar04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/FangZLY04,
  author       = {Hui Fang and
                  ChengXiang Zhai and
                  Lei Liu and
                  Jiong Yang},
  title        = {Subspace Clustering for Microarray Data Analysis: Multiple Criteria
                  and Significance Assessment},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {582--583},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332505},
  doi          = {10.1109/CSB.2004.1332505},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/FangZLY04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/FarmanGJS04,
  author       = {Mark L. Farman and
                  Joshua W. Gilkerson and
                  Jerzy W. Jaromczyk and
                  Chuck Staben},
  title        = {RepeatAssembler: {A} Package for Annotation of Full-Length Repetitive
                  {DNA} Sequences in Fungal Genomes},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {464--467},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332461},
  doi          = {10.1109/CSB.2004.1332461},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/FarmanGJS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/FaulonMC04,
  author       = {Jean{-}Loup Faulon and
                  Shawn Martin and
                  Robert D. Carr},
  title        = {Dynamical Robustness in Gene Regulatory Networks},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {626--627},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332521},
  doi          = {10.1109/CSB.2004.1332521},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/FaulonMC04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/FengTW04,
  author       = {Weimin Feng and
                  Gaurav Tuteja and
                  May D. Wang},
  title        = {EGOMinor: {A} Genomics and Proteomics Data Computation and Interpretation
                  System for Biomedical Applications},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {562--563},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332496},
  doi          = {10.1109/CSB.2004.1332496},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/FengTW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/FurihataIK04,
  author       = {Shiori Furihata and
                  Toshikazu Ito and
                  Naoyuki Kamatani},
  title        = {Association Tests and Estimation of Haplotype Frequencies and of Penetrance-Related
                  Parameters in a Case-Control Study},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {744--745},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332566},
  doi          = {10.1109/CSB.2004.1332566},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/FurihataIK04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/GaoBR04,
  author       = {Jianbo Gao and
                  Jesse S. A. Bridgewater and
                  Vwani P. Roychowdhury},
  title        = {Synchronized Oscillations and Chaos in Coupled Genetic Repressilators},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {630--631},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332523},
  doi          = {10.1109/CSB.2004.1332523},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/GaoBR04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/Gardner-StephenK04,
  author       = {Paul Gardner{-}Stephen and
                  Greg Knowles},
  title        = {{DASH:} Localising Dynamic Programming for Order of Magnitude Faster,
                  Accurate Sequence Alignment},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {732--735},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332562},
  doi          = {10.1109/CSB.2004.1332562},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/Gardner-StephenK04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/GengBA04,
  author       = {Huimin Geng and
                  Dhundy Bastola and
                  Hesham H. Ali},
  title        = {A New Approach to Clustering Biological Data Using Message Passing},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {493--494},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332472},
  doi          = {10.1109/CSB.2004.1332472},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/GengBA04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/GopalRSI04,
  author       = {Kreshna Gopal and
                  Tod D. Romo and
                  James C. Sacchettini and
                  Thomas R. Ioerger},
  title        = {Weighting Features to Recognize 3D Patterns of Electron Density in
                  X-Ray Protein Crystallography},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {255--265},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332439},
  doi          = {10.1109/CSB.2004.1332439},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/GopalRSI04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/GopalakrishnanZND04,
  author       = {Krishna Gopalakrishnan and
                  R. H. Zadeh and
                  Kayvan Najarian and
                  Alireza Darvish},
  title        = {Computational Analysis and Classification of p53 Mutants According
                  to Primary Structure},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {694--695},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332547},
  doi          = {10.1109/CSB.2004.1332547},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/GopalakrishnanZND04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/GorinDBSHF04,
  author       = {Andrey Gorin and
                  Robert M. Day and
                  Andrey Borziak and
                  Michael B. Strader and
                  Gregory B. Hurst and
                  Tema Fridman},
  title        = {Probability Profile Method - New Approach to Data Analysis in Tandem
                  Mass Spectrometry},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {499--502},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332475},
  doi          = {10.1109/CSB.2004.1332475},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/GorinDBSHF04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/GriggsG04,
  author       = {Allison Griggs and
                  Shuba Gopal},
  title        = {A Markov Model Based Gene Discrimination Approach in Trypanosomes},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {528},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332484},
  doi          = {10.1109/CSB.2004.1332484},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/GriggsG04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/GuoS04,
  author       = {Zhenhua Guo and
                  John W. Stiller},
  title        = {Comparative Genomics of Cyclin-Dependent Kinases Suggest Co-Evolution
                  of the {RNAP} {II} C-Terminal Domain and CTD-Directed CDKs},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {510--511},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332478},
  doi          = {10.1109/CSB.2004.1332478},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/GuoS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/GuoX04,
  author       = {Jun{-}tao Guo and
                  Ying Xu},
  title        = {Molecular Modeling of Full-Length OxyR from Shewanella oneidensis
                  {MR-1} and Molecular Dynamics Studies of the Activation Domain},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {708--709},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332554},
  doi          = {10.1109/CSB.2004.1332554},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/GuoX04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/GuptaMS04,
  author       = {Arvind Gupta and
                  J{\'{a}}n Manuch and
                  Ladislav Stacho},
  title        = {Inverse Protein Folding in 2D {HP} Mode (Extended Abstract)},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {311--318},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332444},
  doi          = {10.1109/CSB.2004.1332444},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/GuptaMS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/HanMZ04,
  author       = {Yonghua Han and
                  Bin Ma and
                  Kaizhong Zhang},
  title        = {{SPIDER:} Software for Protein Identification from Sequence Tags with
                  De Novo Sequencing Error},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {206--215},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332434},
  doi          = {10.1109/CSB.2004.1332434},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/HanMZ04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/HeymannNRR04,
  author       = {Stephan Heymann and
                  Felix Naumann and
                  Louiqa Raschid and
                  Peter Rieger},
  title        = {Labeling and Enhancing Life Sciences Links},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {598--599},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332512},
  doi          = {10.1109/CSB.2004.1332512},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/HeymannNRR04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/HuangASS04,
  author       = {Xiaolu Huang and
                  Hesham H. Ali and
                  Anguraj Sadanandam and
                  Rakesh K. Singh},
  title        = {{SRPVS:} {A} New Motif Searching Algorithm for Protein Analysis},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {674--675},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332543},
  doi          = {10.1109/CSB.2004.1332543},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/HuangASS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/IdowuLYA04,
  author       = {Olusola C. Idowu and
                  Steven J. Lynden and
                  Malcolm P. Young and
                  P{\'{e}}ter Andr{\'{a}}s},
  title        = {Bacillus Subtilis Protein Interaction Network Analysis},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {623--625},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332520},
  doi          = {10.1109/CSB.2004.1332520},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/IdowuLYA04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/IzumitaniTKM04,
  author       = {Tomonori Izumitani and
                  Hirotoshi Taira and
                  Hideto Kazawa and
                  Eisaku Maeda},
  title        = {Assigning Gene Ontology Categories {(GO)} to Yeast Genes Using Text-Based
                  Supervised Learning Methods},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {503--504},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332476},
  doi          = {10.1109/CSB.2004.1332476},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/IzumitaniTKM04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/JiaoYC04,
  author       = {Haili Jiao and
                  Peixin Yang and
                  Zhengxin Chen},
  title        = {Mining Estrogen Microarray Data: An Approach Using Contrast Data Analysis},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {560--561},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332495},
  doi          = {10.1109/CSB.2004.1332495},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/JiaoYC04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/KangGG04,
  author       = {Jung{-}Yup Kang and
                  Sandeep Gupta and
                  Jean{-}Luc Gaudiot},
  title        = {Accelerating the Kernels of {BLAST} with an Efficient {PIM} (Processor-In-Memory)
                  Architecture},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {552--553},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332492},
  doi          = {10.1109/CSB.2004.1332492},
  timestamp    = {Fri, 22 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/csb/KangGG04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/KangK04,
  author       = {Hee Young Kang and
                  Hak Yong Kim},
  title        = {Functional Modules from Protein Networks of Kinome and Cell Cycle
                  in Saccharomyces Cerevisiae},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {621--622},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332519},
  doi          = {10.1109/CSB.2004.1332519},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/KangK04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/KassonHDB04,
  author       = {Peter M. Kasson and
                  Johannes B. Huppa and
                  Mark M. Davis and
                  Axel T. Br{\"{u}}nger},
  title        = {Quantitative Analysis of Membrane Protein Localization and Signaling},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {540--541},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332489},
  doi          = {10.1109/CSB.2004.1332489},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/KassonHDB04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/KaufmanKR04,
  author       = {Alon Kaufman and
                  Martin Kupiec and
                  Eytan Ruppin},
  title        = {Multi-Knockout Genetic Network Analysis: The Rad6 Example},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {332--340},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332446},
  doi          = {10.1109/CSB.2004.1332446},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/KaufmanKR04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/Kent04,
  author       = {Jim Kent},
  title        = {Spaghetti Code, Soupy Logic, and the Expression of Genes},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {7},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332440},
  doi          = {10.1109/CSB.2004.1332440},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/Kent04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/KimGP04,
  author       = {Hyunsoo Kim and
                  Gene H. Golub and
                  Haesun Park},
  title        = {Imputation of Missing Values in {DNA} Microarray Gene Expression Data},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {572--573},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332500},
  doi          = {10.1109/CSB.2004.1332500},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/KimGP04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/KimP04,
  author       = {Hyunsoo Kim and
                  Haesun Park},
  title        = {Incremental and Decremental Least Squares Support Vector Machine and
                  Its Application to Drug Design},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {656--657},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.ieeecomputersociety.org/10.1109/CSB.2004.10005},
  doi          = {10.1109/CSB.2004.10005},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/KimP04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/KnowlesG04,
  author       = {Greg Knowles and
                  Paul Gardner{-}Stephen},
  title        = {A New Hardware Architecture for Genomic and Proteomic Sequence Alignment},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {730--731},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332561},
  doi          = {10.1109/CSB.2004.1332561},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/KnowlesG04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/KoNKA04,
  author       = {Pang Ko and
                  Mahesh Narayanan and
                  Anantharaman Kalyanaraman and
                  Srinivas Aluru},
  title        = {Space-Conserving Optimal DNA-Protein Alignment},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {80--88},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332420},
  doi          = {10.1109/CSB.2004.1332420},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/KoNKA04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/KoyuturkSG04,
  author       = {Mehmet Koyut{\"{u}}rk and
                  Wojciech Szpankowski and
                  Ananth Grama},
  title        = {Biclustering Gene-Feature Matrices for Statistically Significant Dense
                  Patterns},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {480--484},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332467},
  doi          = {10.1109/CSB.2004.1332467},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/KoyuturkSG04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/KuangIWWSFL04,
  author       = {Rui Kuang and
                  Eugene Ie and
                  Ke Wang and
                  Kai Wang and
                  Mahira Siddiqi and
                  Yoav Freund and
                  Christina S. Leslie},
  title        = {Profile-Based String Kernels for Remote Homology Detection and Motif
                  Extraction},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {152--160},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332428},
  doi          = {10.1109/CSB.2004.1332428},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/KuangIWWSFL04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LacroixE04,
  author       = {Zo{\'{e}} Lacroix and
                  Vidyadhari Edupuganti},
  title        = {How Biological Source Capabilities May Affect the Data Collection
                  Process},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {596--597},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332511},
  doi          = {10.1109/CSB.2004.1332511},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LacroixE04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LacroixPDRJ04,
  author       = {Zo{\'{e}} Lacroix and
                  Kaushal Parekh and
                  Hasan Davulcu and
                  I. V. Ramakrishnan and
                  Nikeeta Julasana},
  title        = {Automating the Biological Data Collection Process with Agents},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {489--490},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332470},
  doi          = {10.1109/CSB.2004.1332470},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LacroixPDRJ04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LacroixPRV04,
  author       = {Zo{\'{e}} Lacroix and
                  Kaushal Parekh and
                  Louiqa Raschid and
                  Maria{-}Esther Vidal},
  title        = {Navigating through the Biological Maze},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {594--595},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332510},
  doi          = {10.1109/CSB.2004.1332510},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LacroixPRV04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LangmeadD04,
  author       = {Christopher James Langmead and
                  Bruce Randall Donald},
  title        = {High-Throughput 3D Structural Homology Detection via {NMR} Resonance
                  Assignment},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {278--289},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332441},
  doi          = {10.1109/CSB.2004.1332441},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LangmeadD04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LeMZ04,
  author       = {Shu{-}Yun Le and
                  Jacob V. Maizel Jr. and
                  Kaizhong Zhang},
  title        = {An Algorithm for Detecting Homologues of Known Structured RNAs in
                  Genomes},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {300--310},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332443},
  doi          = {10.1109/CSB.2004.1332443},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LeMZ04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LeeSTST04,
  author       = {Hsiao Ping Lee and
                  Tzu Fang Sheu and
                  Yin{-}Te Tsai and
                  Ching Hua Shih and
                  Chuan Yi Tang},
  title        = {A Efficient Algorithm for Unique Signature Discovery on Whole-Genome
                  {EST} Databases},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {650--651},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332532},
  doi          = {10.1109/CSB.2004.1332532},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LeeSTST04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LeeVK04,
  author       = {Lie{-}Quan Lee and
                  Jeff Varner and
                  Kwok Ko},
  title        = {Parallel Extreme Pathway Computation for Metabolic Networks},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {636--639},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332526},
  doi          = {10.1109/CSB.2004.1332526},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LeeVK04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LiHB04,
  author       = {Yingxin Li and
                  Carol A. Heckman and
                  Julie A. Barnes},
  title        = {Nonlinear Modeling on Protein Kinase C(PKC)-Epsilon Inverse Regulation
                  of Stress Fibers in Oncogenically Transformed Cells},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {456--457},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.ieeecomputersociety.org/10.1109/CSB.2004.10000},
  doi          = {10.1109/CSB.2004.10000},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LiHB04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LiZJ04,
  author       = {Haifeng Li and
                  Keshu Zhang and
                  Tao Jiang},
  title        = {Minimum Entropy Clustering and Applications to Gene Expression Analysis},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {142--151},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332427},
  doi          = {10.1109/CSB.2004.1332427},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LiZJ04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LinCHCG04,
  author       = {Eugene Lin and
                  Dennis Chen and
                  Yuchi Hwang and
                  Ashely Chang and
                  Z. John Gu},
  title        = {A Prediction Model for the Drug Efficacy of Interferon in {CHC} Patients
                  Based on SNPs},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {658--659},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332535},
  doi          = {10.1109/CSB.2004.1332535},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LinCHCG04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LiuCBDRND04,
  author       = {Ying Liu and
                  Brian J. Ciliax and
                  Karin Borges and
                  Venu Dasigi and
                  Ashwin Ram and
                  Shamkant B. Navathe and
                  Ray Dingledine},
  title        = {Comparison of Two Schemes for Automatic Keyword Extraction from {MEDLINE}
                  for Functional Gene Clustering},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {394--404},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332452},
  doi          = {10.1109/CSB.2004.1332452},
  timestamp    = {Thu, 07 Dec 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LiuCBDRND04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LiuJNSH04,
  author       = {Fang Liu and
                  Tor{-}Kristian Jenssen and
                  Vegard Nygaard and
                  John Sack and
                  Eivind Hovig},
  title        = {FigSearch: Using Maximum Entropy Classifier to Categorize Biological
                  Figures},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {476--477},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332465},
  doi          = {10.1109/CSB.2004.1332465},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LiuJNSH04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LiuL04,
  author       = {Jian Liu and
                  Ming Li},
  title        = {Finding Cancer Biomarkers from Mass Spectrometry Data by Decision
                  Lists},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {654--655},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332534},
  doi          = {10.1109/CSB.2004.1332534},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LiuL04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LiuLW04,
  author       = {Huiqing Liu and
                  Jinyan Li and
                  Limsoon Wong},
  title        = {Selection of Patient Samples and Genes for Outcome Prediction},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {382--392},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332451},
  doi          = {10.1109/CSB.2004.1332451},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LiuLW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LiuLZH04,
  author       = {Hong Liu and
                  Li Li and
                  Asher Zilberstein and
                  Chang S. Hahn},
  title        = {Segmental Duplications Containing Tandem Repeated Genes Encoding Putative
                  Deubiquitinating Enzymes},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {31--39},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332414},
  doi          = {10.1109/CSB.2004.1332414},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/csb/LiuLZH04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LiuSDCZD04,
  author       = {Dongqing Liu and
                  Ting Shi and
                  Joseph A. DiDonato and
                  John D. Carpten and
                  Jianping Zhu and
                  Zhong{-}Hui Duan},
  title        = {Application of a Genetic Algorithm/K-Nearest Neighbor Method to the
                  Classification of Renal Cell Carcinoma},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {558--559},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332494},
  doi          = {10.1109/CSB.2004.1332494},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LiuSDCZD04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LiuWY04,
  author       = {Jinze Liu and
                  Wei Wang and
                  Jiong Yang},
  title        = {Gene Ontology Friendly Biclustering of Expression Profiles},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {436--447},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332456},
  doi          = {10.1109/CSB.2004.1332456},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LiuWY04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LiuYW04,
  author       = {Jinze Liu and
                  Jiong Yang and
                  Wei Wang},
  title        = {Biclustering in Gene Expression Data by Tendency},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {182--193},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332431},
  doi          = {10.1109/CSB.2004.1332431},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LiuYW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LonardiL04,
  author       = {Stefano Lonardi and
                  Yu Luo},
  title        = {Gridding and Compression of Microarray Images},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {122--130},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332424},
  doi          = {10.1109/CSB.2004.1332424},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LonardiL04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/MaherTSW04,
  author       = {Christopher Maher and
                  Marja Timmermans and
                  Lincoln Stein and
                  Doreen Ware},
  title        = {Identifying MicroRNAs in Plant Genomes},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {718--723},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332558},
  doi          = {10.1109/CSB.2004.1332558},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/MaherTSW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/MakL04,
  author       = {Terrence S. T. Mak and
                  Kai{-}Pui Lam},
  title        = {Embedded Computation of Maximum-Likelihood Phylogeny Inference Using
                  Platform {FPGA}},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {512--514},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332479},
  doi          = {10.1109/CSB.2004.1332479},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/MakL04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/MamitsukaO04,
  author       = {Hiroshi Mamitsuka and
                  Yasushi Okuno},
  title        = {A Hierarchical Mixture of Markov Models for Finding Biologically Active
                  Metabolic Paths Using Gene Expression and Protein Classes},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {341--352},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332447},
  doi          = {10.1109/CSB.2004.1332447},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/MamitsukaO04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/MaoSOCX04,
  author       = {Fenglou Mao and
                  Zhengchang Su and
                  Victor Olman and
                  David Chuang and
                  Ying Xu},
  title        = {Pathway Mapping with Operon Information: An Integer-Programming Method},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {642--643},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332528},
  doi          = {10.1109/CSB.2004.1332528},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/MaoSOCX04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/MartinDMFW04,
  author       = {Shawn Martin and
                  George Davidson and
                  Elebeoba E. May and
                  Jean{-}Loup Faulon and
                  Margaret Werner{-}Washburne},
  title        = {Inferring Genetic Networks from Microarray Data},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {566--569},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332498},
  doi          = {10.1109/CSB.2004.1332498},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/MartinDMFW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/MartinH04,
  author       = {Bill Martin and
                  Robert M. Horton},
  title        = {A Java Program to Create Simulated Microarray Images},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {564--565},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332497},
  doi          = {10.1109/CSB.2004.1332497},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/MartinH04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/MatsuiSS04,
  author       = {Hiroshi Matsui and
                  Kengo Sato and
                  Yasubumi Sakakibara},
  title        = {Pair Stochastic Tree Adjoining Grammars for Aligning and Predicting
                  Pseudoknot {RNA} Structures},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {290--299},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332442},
  doi          = {10.1109/CSB.2004.1332442},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/MatsuiSS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/MatsuyamaK04,
  author       = {Yasuo Matsuyama and
                  Ryo Kawamura},
  title        = {Promoter Recognition for E. coli {DNA} Segments by Independent Component
                  Analysis},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {686--691},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332546},
  doi          = {10.1109/CSB.2004.1332546},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/MatsuyamaK04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/MeltzerDBC04,
  author       = {Paul S. Meltzer and
                  Sean R. Davis and
                  Kristin Baird and
                  Yidong Chen},
  title        = {Are We There Yet? Genomic Profiling and Mechanism in Cancer Research},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {6},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332408},
  doi          = {10.1109/CSB.2004.1332408},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/MeltzerDBC04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/MerazHDH04,
  author       = {Richard F. Meraz and
                  Xiaofeng He and
                  Chris H. Q. Ding and
                  Stephen R. Holbrook},
  title        = {Positive Sample Only Learning {(PSOL)} for Predicting {RNA} Genes
                  in E. coli},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {535--538},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332488},
  doi          = {10.1109/CSB.2004.1332488},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/MerazHDH04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/MiyakeTM04,
  author       = {Shoko Miyake and
                  Yoichi Takenaka and
                  Hideo Matsuda},
  title        = {A Graph Analysis Method to Detect Metabolic Sub-Networks Based on
                  Phylogenetic Profile},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {634--635},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332525},
  doi          = {10.1109/CSB.2004.1332525},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/MiyakeTM04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/MollaSARS04,
  author       = {Michael Molla and
                  Jude W. Shavlik and
                  Thomas Albert and
                  Todd Richmond and
                  Steven Smith},
  title        = {A Self-Tuning Method for One-Chip {SNP} Identification},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {69--79},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332419},
  doi          = {10.1109/CSB.2004.1332419},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/MollaSARS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/MukherjeeR04,
  author       = {Sach Mukherjee and
                  Stephen J. Roberts},
  title        = {A Theoretical Analysis of Gene Selection},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {131--141},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332425},
  doi          = {10.1109/CSB.2004.1332425},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/MukherjeeR04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/MukherjeeR04a,
  author       = {Sach Mukherjee and
                  Stephen J. Roberts},
  title        = {Probabilistic Consistency Analysis for Gene Selection},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {487--488},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.ieeecomputersociety.org/10.1109/CSB.2004.133},
  doi          = {10.1109/CSB.2004.133},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/MukherjeeR04a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/MurthyH04,
  author       = {Karuturi R. Krishna Murthy and
                  Liu Jian Hua},
  title        = {Improved Fourier Transform Method for Unsupervised Cell-Cycle Regulated
                  Gene Prediction},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {194--203},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332433},
  doi          = {10.1109/CSB.2004.1332433},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/MurthyH04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/Myers04,
  author       = {Eugene W. Myers},
  title        = {Whole Genome Sequencing, Comparative Genomics, and Systems Biology},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {4},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332407},
  doi          = {10.1109/CSB.2004.1332407},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/Myers04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/NanA04,
  author       = {Fei Nan and
                  Donald A. Adjeroh},
  title        = {On Complexity Measures for Biological Sequences},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {522--526},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332483},
  doi          = {10.1109/CSB.2004.1332483},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/NanA04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/NingSSLRC04,
  author       = {Zemin Ning and
                  William Spooner and
                  Adam Spargo and
                  Steven Leonard and
                  Mark Rae and
                  Antony J. Cox},
  title        = {The {SSAHA} Trace Server},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {544--545},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332490},
  doi          = {10.1109/CSB.2004.1332490},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/NingSSLRC04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/NoelW04,
  author       = {Kirt M. No{\"{e}}l and
                  Kay C. Wiese},
  title        = {Exploring the Use of Stem-Loop Characteristics for Pinpointing Structural
                  {RNA} Genes},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {533--534},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332487},
  doi          = {10.1109/CSB.2004.1332487},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/NoelW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/OlmanLDSX04,
  author       = {Victor Olman and
                  Jizhu Lu and
                  PhuongAn Dam and
                  Zhengchang Su and
                  Ying Xu},
  title        = {{CUBIC:} Search for Binding Sites},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {666--667},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332538},
  doi          = {10.1109/CSB.2004.1332538},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/OlmanLDSX04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/OlmanPSX04,
  author       = {Victor Olman and
                  Hanchuan Peng and
                  Zhengchang Su and
                  Ying Xu},
  title        = {Mapping of Microbial Pathways through Constrained Mapping of Orthologous
                  Genes},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {363--370},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332449},
  doi          = {10.1109/CSB.2004.1332449},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/OlmanPSX04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/PanSFFSW04,
  author       = {Youlian Pan and
                  Brandon Smith and
                  Hung Fang and
                  A. Fazel Famili and
                  Marianna Sikorska and
                  P. Roy Walker},
  title        = {Selection of Putative Cis-Regulatory Motifs through Regional and Global
                  Conservation},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {684--685},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332545},
  doi          = {10.1109/CSB.2004.1332545},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/PanSFFSW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/PhanQGFWW04,
  author       = {John H. Phan and
                  Chang F. Quo and
                  Kejiao Guo and
                  Weimin Feng and
                  Geoffrey Wang and
                  May D. Wang},
  title        = {Development of a Knowledge-Based Multi-Scheme Cancer Microarray Data
                  Analysis System},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {474--475},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332464},
  doi          = {10.1109/CSB.2004.1332464},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/PhanQGFWW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/PodowskiCGAH04,
  author       = {Raf M. Podowski and
                  John G. Cleary and
                  Nicholas T. Goncharoff and
                  Gregory Amoutzias and
                  William S. Hayes},
  title        = {AZuRE, a Scalable System for Automated Term Disambiguation of Gene
                  and Protein Names},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {415--424},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332454},
  doi          = {10.1109/CSB.2004.1332454},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/PodowskiCGAH04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/Puiu04,
  author       = {Daniela Puiu},
  title        = {{SUPERCONTIGS:} {A} Contig Scaffolding Tool},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {736--737},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332563},
  doi          = {10.1109/CSB.2004.1332563},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/Puiu04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/QiGCT04,
  author       = {Yan Qi and
                  Jianbo Gao and
                  Yinhe Cao and
                  Wen{-}wen Tung},
  title        = {Deriving a Novel Codon Index by Combining Period-3 and Fractal Features
                  of {DNA} Sequences},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {531--532},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332486},
  doi          = {10.1109/CSB.2004.1332486},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/QiGCT04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/QiLBHOLTW04,
  author       = {Weihong Qi and
                  David W. Lacher and
                  Alyssa C. Bumbaugh and
                  Katie E. Hyma and
                  Lindsey M. Ouellette and
                  Teresa M. Large and
                  Cheryl L. Tarr and
                  Thomas S. Whittam},
  title        = {EcMLST: An Online Database for Multi Locus Sequence Typing of Pathogenic
                  Escherichia coli},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {520--521},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332482},
  doi          = {10.1109/CSB.2004.1332482},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/QiLBHOLTW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/QuestA04,
  author       = {Daniel Quest and
                  Hesham H. Ali},
  title        = {Ontology Specific Data Mining Based on Dynamic Grammars},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {495--496},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332473},
  doi          = {10.1109/CSB.2004.1332473},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/QuestA04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/RacunasGS04,
  author       = {Stephen A. Racunas and
                  Christopher Griffin and
                  Nigam Shah},
  title        = {A Finite Model Theory for Biological Hypotheses},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {616--620},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332518},
  doi          = {10.1109/CSB.2004.1332518},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/RacunasGS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/RaoS04,
  author       = {Nini Rao and
                  Simon J. Shepherd},
  title        = {Extracting Characteristic Patterns from Genome - Wide Expression Data
                  by Non-Negative Matrix Factorization},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {570--571},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332499},
  doi          = {10.1109/CSB.2004.1332499},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/RaoS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/RoshanMWW04,
  author       = {Usman Roshan and
                  Bernard M. E. Moret and
                  Tandy J. Warnow and
                  Tiffani L. Williams},
  title        = {Rec-I-DCM3: {A} Fast Algorithmic Technique for Reconstructing Large
                  Phylogenetic Trees},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {98--109},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332422},
  doi          = {10.1109/CSB.2004.1332422},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/RoshanMWW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/SachsPPNGJL04,
  author       = {Karen Sachs and
                  Omar D. Perez and
                  Dana Pe'er and
                  Garry P. Nolan and
                  David K. Gifford and
                  Tommi S. Jaakkola and
                  Douglas A. Lauffenburger},
  title        = {Analysis of Signaling Pathways in Human T-Cells Using Bayesian Network
                  Modeling of Single Cell Data},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {644},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332529},
  doi          = {10.1109/CSB.2004.1332529},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/SachsPPNGJL04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/SadanandamVS04,
  author       = {Anguraj Sadanandam and
                  Michelle L. Varney and
                  Rakesh K. Singh},
  title        = {High-Throughput Computational and Experimental Biology Strategy in
                  Identifying Tumor Expressing CAMs},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {450--451},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332457},
  doi          = {10.1109/CSB.2004.1332457},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/SadanandamVS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/Schwartz04,
  author       = {Russell Schwartz},
  title        = {Algorithms for Association Study Design Using a Generalized Model
                  of Haplotype Conservation},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {90--97},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332421},
  doi          = {10.1109/CSB.2004.1332421},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/Schwartz04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/ShadforthCB04,
  author       = {Ian Shadforth and
                  Daniel Crowther and
                  Conrad Bessant},
  title        = {Search-Space Reduction of a Non-Redundant Peptide Database},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {470--471},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332462},
  doi          = {10.1109/CSB.2004.1332462},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/ShadforthCB04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/ShahLRT04,
  author       = {Maulik K. Shah and
                  Hojoon Lee and
                  Stephanie A. Rogers and
                  Jeffrey W. Touchman},
  title        = {An Exhaustive Genome Assembly Algorithm Using K-Mers to Indirectly
                  Perform N-Squared Comparisons in {O(N)}},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {740--741},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332565},
  doi          = {10.1109/CSB.2004.1332565},
  timestamp    = {Thu, 03 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/csb/ShahLRT04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/Shamir04,
  author       = {Ron Shamir},
  title        = {Computational Dissection of Regulatory Networks Using Diverse High-Throughput
                  Data},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {2--3},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332406},
  doi          = {10.1109/CSB.2004.1332406},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/Shamir04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/ShawS04,
  author       = {Sandy Shaw and
                  Paul Shapshak},
  title        = {Fractal Genomics Modeling: {A} New Approach to Genomic Analysis and
                  Biomarker Discovery},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {9--17},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332411},
  doi          = {10.1109/CSB.2004.1332411},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/ShawS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/ShklarSSSLS04,
  author       = {Maxim Shklar and
                  Orit Shmueli and
                  Liora Strichman{-}Almashanu and
                  Michael Shmoish and
                  Doron Lancet and
                  Marilyn Safran},
  title        = {GeneTide: Terra Incognita Discovery Endeavor Mining ESTs and Expression
                  Data to Elucidate Known and De-Novo GeneCards Genes},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {478--479},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332466},
  doi          = {10.1109/CSB.2004.1332466},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/ShklarSSSLS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/Singh04,
  author       = {Rahul Singh},
  title        = {Reasoning about Molecular Similarity and Properties},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {266--277},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.ieeecomputersociety.org/10.1109/CSB.2004.10008},
  doi          = {10.1109/CSB.2004.10008},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/Singh04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/SodhiMBWWJ04,
  author       = {Jaspreet Singh Sodhi and
                  Liam J. McGuffin and
                  Kevin Bryson and
                  Jonathan J. Ward and
                  Lorenz Wernisch and
                  David T. Jones},
  title        = {Automatic Prediction of Functional Site Regions in Low-Resolution
                  Protein Structures},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {702--703},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332551},
  doi          = {10.1109/CSB.2004.1332551},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/SodhiMBWWJ04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/SofiaCKCS04,
  author       = {Heidi J. Sofia and
                  Abigail L. Corrigan and
                  Kyle R. Klicker and
                  George Chin Jr. and
                  Eric G. Stephan},
  title        = {Exploring Genomic Context Patterns for Rhodobacter Sphaeroides in
                  the {HERBE} Knowledge Discovery Environment},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {462--463},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332460},
  doi          = {10.1109/CSB.2004.1332460},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/SofiaCKCS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/SteeleS04,
  author       = {Grace Steele and
                  Vojislav Stojkovic},
  title        = {Agent-Oriented Approach to {DNA} Computing},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {546--551},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332491},
  doi          = {10.1109/CSB.2004.1332491},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/SteeleS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/StoneWG04,
  author       = {Jeffrey Stone and
                  Xindong Wu and
                  Marc Greenblatt},
  title        = {An Intelligent Digital Library System for Biologists},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {491--492},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332471},
  doi          = {10.1109/CSB.2004.1332471},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/StoneWG04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/SuDCOJX04,
  author       = {Zhengchang Su and
                  PhuongAn Dam and
                  X. Chen and
                  Victor Olman and
                  Tao Jiang and
                  Ying Xu},
  title        = {Computational Construction of Nitrogen Assimilation Pathway in Cyanobacteria
                  Synechococcus sp. {WH8102}},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {640--641},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332527},
  doi          = {10.1109/CSB.2004.1332527},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/SuDCOJX04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/SunYD04,
  author       = {Zhaohui Sun and
                  Jingyi Yang and
                  Jitender S. Deogun},
  title        = {{MISAE:} {A} New Approach for Regulatory Motif Extraction},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {173--181},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332430},
  doi          = {10.1109/CSB.2004.1332430},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/SunYD04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/TakiTTM04,
  author       = {Kohei Taki and
                  Reiji Teramoto and
                  Yoichi Takenaka and
                  Hideo Matsuda},
  title        = {Inference of Gene Regulatory Network Based on Module Network Model
                  with Gene Functional Classifications},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {632--633},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332524},
  doi          = {10.1109/CSB.2004.1332524},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/TakiTTM04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/TaylorV04,
  author       = {Todd J. Taylor and
                  Iosif I. Vaisman},
  title        = {A New Method of Secondary Structure Assignment Based on the Delaunay
                  Tessellation of Protein Structures},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {706--707},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332553},
  doi          = {10.1109/CSB.2004.1332553},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/TaylorV04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/TchourbanovAD04,
  author       = {Alexandre Tchourbanov and
                  Hesham H. Ali and
                  Jitender S. Deogun},
  title        = {Using Enhancing Signals to Improve Specificity of ab initio Splice
                  Site Sensors},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {672--673},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332542},
  doi          = {10.1109/CSB.2004.1332542},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/TchourbanovAD04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/VijayaSatyaM04,
  author       = {Ravi Vijaya Satya and
                  Amar Mukherjee},
  title        = {{PRUNER:} Algorithms for Finding Monad Patterns in {DNA} Sequences},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {662--665},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332537},
  doi          = {10.1109/CSB.2004.1332537},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/VijayaSatyaM04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/WangC04,
  author       = {Wei Wang and
                  Gregory F. Cooper},
  title        = {An Bayesian Method for Biological Pathway Discovery from High-Throughput
                  Experimental Data},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {645--646},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332530},
  doi          = {10.1109/CSB.2004.1332530},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/WangC04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/WangD04,
  author       = {Lincong Wang and
                  Bruce Randall Donald},
  title        = {Analysis of a Systematic Search-Based Algorithm for Determining Protein
                  Backbone Structure from a Minimum Number of Residual Dipolar Couplings},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {319--330},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332445},
  doi          = {10.1109/CSB.2004.1332445},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/WangD04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/WangH04,
  author       = {Yuan{-}Kai Wang and
                  Cheng{-}Wei Huang},
  title        = {{DNA} Microarray Image Analysis Using Active Contour Model},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {576--577},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332502},
  doi          = {10.1109/CSB.2004.1332502},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/WangH04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/WangKPT04,
  author       = {Pei Wang and
                  Young Kim and
                  Jonathan R. Pollack and
                  Robert Tibshirani},
  title        = {Boosted {PRIM} with Application to Searching for Oncogenic Pathway
                  of Lung Cancer},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {604--609},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332514},
  doi          = {10.1109/CSB.2004.1332514},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/WangKPT04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/WangM04,
  author       = {Yuhang Wang and
                  Fillia Makedon},
  title        = {Application of Relief-F Feature Filtering Algorithm to Selecting Informative
                  Genes for Cancer Classification Using Microarray Data},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {497--498},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332474},
  doi          = {10.1109/CSB.2004.1332474},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/WangM04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/WangNSC04,
  author       = {Ruiqi Wang and
                  Junya Nakai and
                  Mitsuyasu Seo and
                  Luonan Chen},
  title        = {Designing Synthetic Biological Systems by Multiple Time Scale Networks},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {748--749},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332567},
  doi          = {10.1109/CSB.2004.1332567},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/WangNSC04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/WangSDX04,
  author       = {Peng Wang and
                  Zhengchang Su and
                  PhuongAn Dam and
                  Ying Xu},
  title        = {A Knowledge Base for Computational Pathway Reconstruction},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {612--613},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332516},
  doi          = {10.1109/CSB.2004.1332516},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/WangSDX04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/WangSGX04,
  author       = {Peng Wang and
                  Zhengchang Su and
                  Jun{-}tao Guo and
                  Ying Xu},
  title        = {Structural Analysis of {FGFR1} Kinase Activation through Molecular
                  Dynamics Simulation},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {700--701},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332550},
  doi          = {10.1109/CSB.2004.1332550},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/WangSGX04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/WangTX04,
  author       = {Tie Wang and
                  Jeffrey W. Touchman and
                  Guoliang Xue},
  title        = {Applying Two-Level Simulated Annealing on Bayesian Structure Learning
                  to Infer Genetic Networks},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {647--648},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332531},
  doi          = {10.1109/CSB.2004.1332531},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/WangTX04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/WangZ04,
  author       = {Zhuozhi Wang and
                  Kaizhong Zhang},
  title        = {Multiple {RNA} Structure Alignment},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {246--254},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332438},
  doi          = {10.1109/CSB.2004.1332438},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/WangZ04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/WardSBJ04,
  author       = {Jonathan J. Ward and
                  Jaspreet Singh Sodhi and
                  Bernard F. Buxton and
                  David T. Jones},
  title        = {Predicting Gene Ontology Annotations from Sequence Data Using Kernel-Based
                  Machine Learning Algorithms},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {529--530},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332485},
  doi          = {10.1109/CSB.2004.1332485},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/WardSBJ04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/Wong04,
  author       = {Stephen T. C. Wong},
  title        = {High Content Cellular Analysis and Their Applications},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {8},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332410},
  doi          = {10.1109/CSB.2004.1332410},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/Wong04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/WuC04,
  author       = {Xuanfu Wu and
                  Zhengxin Chen},
  title        = {Recognition of Exon/Intron Boundaries Using Dynamic Ensembles},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {485--486},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332468},
  doi          = {10.1109/CSB.2004.1332468},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/WuC04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/WuKZ04,
  author       = {Fang{-}Xiang Wu and
                  Anthony J. Kusalik and
                  Wen{-}Jun Zhang},
  title        = {A. Genetic Algorithm for Inferring Time Delays in Gene Regulatory
                  Networks},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {610--611},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332515},
  doi          = {10.1109/CSB.2004.1332515},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/WuKZ04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/WuZK04,
  author       = {Fang{-}Xiang Wu and
                  Wen{-}Jun Zhang and
                  Anthony J. Kusalik},
  title        = {State-Space Model for Gene Regulatory Networks with Time Delays},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {454--455},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332458},
  doi          = {10.1109/CSB.2004.1332458},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/WuZK04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/XieGJW04,
  author       = {Yizhou Xie and
                  Soumitra Ghosh and
                  Parthav Jailwalia and
                  Xujing Wang},
  title        = {The Dynamic Range of Gene Expressions Depend on Their Ontology},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {580--581},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332504},
  doi          = {10.1109/CSB.2004.1332504},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/XieGJW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/XieW04,
  author       = {Yizhou Xie and
                  Xujing Wang},
  title        = {Analysis of Population Dynamics in Beta-Cell Destruction Lead to Identification
                  of Novel Candidate Genes for Type 1 Diabetes},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {458--459},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332459},
  doi          = {10.1109/CSB.2004.1332459},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/XieW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/XuBFSCPZCL04,
  author       = {Xiequn Xu and
                  William Bradley Barbazuk and
                  Yucheng Feng and
                  Karel Schubert and
                  Agnes P. Chan and
                  Geo Pertea and
                  Li Zheng and
                  Foo Cheung and
                  Yuandan Lee},
  title        = {Gene Recovery of Two Genome-Filtration Sequencing Techniques When
                  Applied to the Maize Genome},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {594--595},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332509},
  doi          = {10.1109/CSB.2004.1332509},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/XuBFSCPZCL04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/YanPOHX04,
  author       = {Bo Yan and
                  Chongle Pan and
                  Victor Olman and
                  Robert L. Hettich and
                  Ying Xu},
  title        = {Separation of Ion Types in Tandem Mass Spectrometry Data Interpretation
                  - {A} Graph-Theoretic Approach},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {236--244},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332437},
  doi          = {10.1109/CSB.2004.1332437},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/YanPOHX04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/Yang04,
  author       = {Xiao Yang},
  title        = {Qvalue Method May Not Always Control False Discovery Rate in Genomics
                  Applications},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {556--557},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332493},
  doi          = {10.1109/CSB.2004.1332493},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/Yang04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/YangHH04,
  author       = {Geoffrey Yang and
                  Ming{-}Hsiu Ho and
                  Earl Hubbell},
  title        = {High-Throughput Microarray-Based Genotyping},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {586--587},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332507},
  doi          = {10.1109/CSB.2004.1332507},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/YangHH04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/YoshidaHI04,
  author       = {Ryo Yoshida and
                  Tomoyuki Higuchi and
                  Seiya Imoto},
  title        = {A Mixed Factors Model for Dimension Reduction and Extraction of a
                  Group Structure in Gene Expression Data},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {161--172},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332429},
  doi          = {10.1109/CSB.2004.1332429},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/YoshidaHI04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/YuPCGS04,
  author       = {Gong{-}Xin Yu and
                  Byung{-}Hoon Park and
                  Praveen Chandramohan and
                  Al Geist and
                  Nagiza F. Samatova},
  title        = {In-Silico Prediction of Surface Residue Clusters for Enzyme-Substrate
                  Specificity},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {696--697},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332548},
  doi          = {10.1109/CSB.2004.1332548},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/YuPCGS04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/YunK04,
  author       = {Zheng Yun and
                  Kwoh Chee Keong},
  title        = {Dynamic Algorithm for Inferring Qualitative Models of Gene Regulatory
                  Networks},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {353--362},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332448},
  doi          = {10.1109/CSB.2004.1332448},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/YunK04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/ZanogueraF04,
  author       = {Francisca Zanoguera and
                  Massimo de Francesco},
  title        = {Protein Classification into Domains of Life Using Markov Chain Models},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {517--519},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332481},
  doi          = {10.1109/CSB.2004.1332481},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/ZanogueraF04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/ZhongTLSW04,
  author       = {Sheng Zhong and
                  Lu Tian and
                  Cheng Li and
                  Kai{-}Florian Storch and
                  Wing Hung Wong},
  title        = {Comparative Analysis of Gene Sets in the Gene Ontology Space under
                  the Multiple Hypothesis Testing Framework},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {425--435},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332455},
  doi          = {10.1109/CSB.2004.1332455},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/ZhongTLSW04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/csb/2004,
  title        = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://ieeexplore.ieee.org/xpl/conhome/9262/proceeding},
  isbn         = {0-7695-2194-0},
  timestamp    = {Wed, 16 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/csb/2004.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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