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@article{DBLP:journals/nar/AjawatanawongAWMB12,
author = {Pravech Ajawatanawong and
Gemma Catherine Atkinson and
Nathan S. Watson{-}Haigh and
Bryony MacKenzie and
Sandra L. Baldauf},
title = {SeqFIRE: a web application for automated extraction of indel regions
and conserved blocks from protein multiple sequence alignments},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {340--347},
year = {2012},
url = {https://doi.org/10.1093/nar/gks561},
doi = {10.1093/NAR/GKS561},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/AjawatanawongAWMB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AlcantaraAMBCBCMETOBXS12,
author = {Rafael Alc{\'{a}}ntara and
Kristian B. Axelsen and
Anne Morgat and
Eugeni Belda and
Elisabeth Coudert and
Alan J. Bridge and
Hong Cao and
Paula de Matos and
Marcus Ennis and
Steve Turner and
Gareth I. Owen and
Lydie Bougueleret and
Ioannis Xenarios and
Christoph Steinbeck},
title = {Rhea - a manually curated resource of biochemical reactions},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {754--760},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1126},
doi = {10.1093/NAR/GKR1126},
timestamp = {Fri, 15 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/AlcantaraAMBCBCMETOBXS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AlexeyenkoSTGFS12,
author = {Andrey Alexeyenko and
Thomas Schmitt and
Andreas Tj{\"{a}}rnberg and
Dimitri Guala and
Oliver Frings and
Erik L. L. Sonnhammer},
title = {Comparative interactomics with Funcoup 2.0},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {821--828},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1062},
doi = {10.1093/NAR/GKR1062},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/AlexeyenkoSTGFS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AlixBV12,
author = {Alix Boc and
Alpha Boubacar Diallo and
Vladimir Makarenkov},
title = {{T-REX:} a web server for inferring, validating and visualizing phylogenetic
trees and networks},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {573--579},
year = {2012},
url = {https://doi.org/10.1093/nar/gks485},
doi = {10.1093/NAR/GKS485},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/AlixBV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AmemiyaKKO12,
author = {Takayuki Amemiya and
Ryotaro Koike and
Akinori Kidera and
Motonori Ota},
title = {{PSCDB:} a database for protein structural change upon ligand binding},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {554--558},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr966},
doi = {10.1093/NAR/GKR966},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/AmemiyaKKO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AmidBBCCCFGGHJLLOPPRRRRSSHVVZC12,
author = {Clara Amid and
Ewan Birney and
Lawrence Bower and
Ana Cerde{\~{n}}o{-}T{\'{a}}rraga and
Ying Cheng and
Iain Cleland and
Nadeem Faruque and
Richard Gibson and
Neil Goodgame and
Christopher I. Hunter and
Mikyung Jang and
Rasko Leinonen and
Xin Liu and
Arnaud Oisel and
Nima Pakseresht and
Sheila Plaister and
Rajesh Radhakrishnan and
Kethi Reddy and
St{\'{e}}phane Rivi{\`{e}}re and
Marc Rossello and
Alexander Senf and
Dimitriy Smirnov and
Petra ten Hoopen and
Daniel Vaughan and
Robert Vaughan and
Vadim Zalunin and
Guy Cochrane},
title = {Major submissions tool developments at the European nucleotide archive},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {43--47},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr946},
doi = {10.1093/NAR/GKR946},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/AmidBBCCCFGGHJLLOPPRRRRSSHVVZC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AnandYC12,
author = {Praveen Anand and
Kalidas Yeturu and
Nagasuma R. Chandra},
title = {PocketAnnotate: towards site-based function annotation},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {400--408},
year = {2012},
url = {https://doi.org/10.1093/nar/gks421},
doi = {10.1093/NAR/GKS421},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/AnandYC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AnandakrishnanAO12,
author = {Ramu Anandakrishnan and
Boris Aguilar and
Alexey Onufriev},
title = {\emph{H}++ 3.0: automating p\emph{K} prediction and the preparation
of biomolecular structures for atomistic molecular modeling and simulations},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {537--541},
year = {2012},
url = {https://doi.org/10.1093/nar/gks375},
doi = {10.1093/NAR/GKS375},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/AnandakrishnanAO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AndersMJMKRLD12,
author = {Gerd Anders and
Sebastian D. Mackowiak and
Marvin Jens and
Jonas Maaskola and
Andreas Kuntzagk and
Nikolaus Rajewsky and
Markus Landthaler and
Christoph Dieterich},
title = {doRiNA: a database of {RNA} interactions in post-transcriptional regulation},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {180--186},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1007},
doi = {10.1093/NAR/GKR1007},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/AndersMJMKRLD12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ArnaudCISBCCHOSWBMSSW12,
author = {Martha B. Arnaud and
Gustavo C. Cerqueira and
Diane O. Inglis and
Marek S. Skrzypek and
Jonathan Binkley and
Marcus C. Chibucos and
Jonathan Crabtree and
Clinton Howarth and
Joshua Orvis and
Prachi Shah and
Farrell Wymore and
Gail Binkley and
Stuart R. Miyasato and
Matt Simison and
Gavin Sherlock and
Jennifer R. Wortman},
title = {The \emph{Aspergillus} Genome Database (AspGD): recent developments
in comprehensive multispecies curation, comparative genomics and community
resources},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {653--659},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr875},
doi = {10.1093/NAR/GKR875},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ArnaudCISBCCHOSWBMSSW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ArndtXLZGCSBNW12,
author = {David Arndt and
Jianguo Xia and
Yifeng Liu and
You Zhou and
Anchi Guo and
Joseph A. Cruz and
Igor Sinelnikov and
Karen Budwill and
Camilla L. Nesb{\o} and
David S. Wishart},
title = {METAGENassist: a comprehensive web server for comparative metagenomics},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {88--95},
year = {2012},
url = {https://doi.org/10.1093/nar/gks497},
doi = {10.1093/NAR/GKS497},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ArndtXLZGCSBNW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ArtimoJABCCDFFGGHIKLMMRRXS12,
author = {Panu Artimo and
Manohar Jonnalagedda and
Konstantin Arnold and
Delphine Baratin and
G{\'{a}}bor Cs{\'{a}}rdi and
Edouard De Castro and
Severine Duvaud and
Volker Flegel and
Arnaud Fortier and
Elisabeth Gasteiger and
Aur{\'{e}}lien Grosdidier and
C{\'{e}}line Hernandez and
Vassilios Ioannidis and
Dmitri Kuznetsov and
Robin Liechti and
S{\'{e}}bastien Moretti and
Khaled Mostaguir and
Nicole Redaschi and
Gr{\'{e}}goire Rossier and
Ioannis Xenarios and
Heinz Stockinger},
title = {ExPASy: {SIB} bioinformatics resource portal},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {597--603},
year = {2012},
url = {https://doi.org/10.1093/nar/gks400},
doi = {10.1093/NAR/GKS400},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ArtimoJABCCDFFGGHIKLMMRRXS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AshkenazyPDCCZP12,
author = {Haim Ashkenazy and
Osnat Penn and
Adi Doron{-}Faigenboim and
Ofir Cohen and
Gina Cannarozzi and
Oren Zomer and
Tal Pupko},
title = {FastML: a web server for probabilistic reconstruction of ancestral
sequences},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {580--584},
year = {2012},
url = {https://doi.org/10.1093/nar/gks498},
doi = {10.1093/NAR/GKS498},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/AshkenazyPDCCZP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BaetsDRMVDSR12,
author = {Greet De Baets and
Joost J. J. van Durme and
Joke Reumers and
Sebastian Maurer{-}Stroh and
Peter Vanhee and
Joaqu{\'{\i}}n Dopazo and
Joost Schymkowitz and
Frederic Rousseau},
title = {SNPeffect 4.0: on-line prediction of molecular and structural effects
of protein-coding variants},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {935--939},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr996},
doi = {10.1093/NAR/GKR996},
timestamp = {Mon, 04 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BaetsDRMVDSR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BaisMND12,
author = {Preeti Bais and
Stephanie M. Moon{-}Quanbeck and
Basil J. Nikolau and
Julie A. Dickerson},
title = {Plantmetabolomics.org: mass spectrometry-based \emph{Arabidopsis}
metabolomics - database and tools update},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1216--1220},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr969},
doi = {10.1093/NAR/GKR969},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BaisMND12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BakerJBLC12,
author = {Erich J. Baker and
Jeremy J. Jay and
Jason A. Bubier and
Michael A. Langston and
Elissa J. Chesler},
title = {GeneWeaver: a web-based system for integrative functional genomics},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1067--1076},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr968},
doi = {10.1093/NAR/GKR968},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BakerJBLC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BarikMB12,
author = {Amita Barik and
Abhishek Mishra and
Ranjit Prasad Bahadur},
title = {PRince: a web server for structural and physicochemical analysis of
Protein-RNA interface},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {440--444},
year = {2012},
url = {https://doi.org/10.1093/nar/gks535},
doi = {10.1093/NAR/GKS535},
timestamp = {Sun, 06 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BarikMB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BarrettCGGGKKPRTYO12,
author = {Tanya Barrett and
Karen Clark and
Robert Gevorgyan and
Vyatcheslav Gorelenkov and
Eugene Gribov and
Ilene Karsch{-}Mizrachi and
Michael Kimelman and
Kim D. Pruitt and
Sergei Resenchuk and
Tatiana A. Tatusova and
Eugene Yaschenko and
James Ostell},
title = {BioProject and BioSample databases at {NCBI:} facilitating capture
and organization of metadata},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {57--63},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1163},
doi = {10.1093/NAR/GKR1163},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/BarrettCGGGKKPRTYO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Benson12,
author = {Gary Benson},
title = {Editorial},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {1--2},
year = {2012},
url = {https://doi.org/10.1093/nar/gks607},
doi = {10.1093/NAR/GKS607},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/Benson12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BensonKCLOS12,
author = {Dennis A. Benson and
Ilene Karsch{-}Mizrachi and
Karen Clark and
David J. Lipman and
James Ostell and
Eric W. Sayers},
title = {GenBank},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {48--53},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1202},
doi = {10.1093/NAR/GKR1202},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/BensonKCLOS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BerkaHSBNJIVKO12,
author = {Karel Berka and
Ondrej Han{\'{a}}k and
David Sehnal and
Pavel Ban{\'{a}}s and
Veronika Navr{\'{a}}tilov{\'{a}} and
Deepti Jaiswal Kundu and
Crina{-}Maria Ionescu and
Radka Svobodov{\'{a}} Varekov{\'{a}} and
Jaroslav Koca and
Michal Otyepka},
title = {MOLE\emph{online} 2.0: interactive web-based analysis of biomacromolecular
channels},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {222--227},
year = {2012},
url = {https://doi.org/10.1093/nar/gks363},
doi = {10.1093/NAR/GKS363},
timestamp = {Thu, 23 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BerkaHSBNJIVKO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BhatMCRMR12,
author = {Aadil H. Bhat and
Homchoru Mondal and
Jagat Singh Chauhan and
Gajendra P. S. Raghava and
Amrish Methi and
Alka Rao},
title = {ProGlycProt: a repository of experimentally characterized prokaryotic
glycoproteins},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {388--393},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr911},
doi = {10.1093/NAR/GKR911},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BhatMCRMR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BiXHTWHJDRO12,
author = {Dexi Bi and
Zhen Xu and
Ewan M. Harrison and
Cui Tai and
Yiqing Wei and
Xinyi He and
Shiru Jia and
Zixin Deng and
Kumar Rajakumar and
Hong{-}Yu Ou},
title = {ICEberg: a web-based resource for integrative and conjugative elements
found in Bacteria},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {621--626},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr846},
doi = {10.1093/NAR/GKR846},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BiXHTWHJDRO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BielewiczDZASSJSK12,
author = {Dawid Bielewicz and
Jakub Dolata and
Andrzej Zielezinski and
Sylwia Alaba and
Bogna Szarzynska and
Michal Wojciech Szczesniak and
Artur Jarmolowski and
Zofia Szweykowska{-}Kulinska and
Wojciech M. Karlowski},
title = {mirEX: a platform for comparative exploration of plant pri-miRNA expression
data},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {191--197},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr878},
doi = {10.1093/NAR/GKR878},
timestamp = {Wed, 17 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/BielewiczDZASSJSK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BisogninSCBR12,
author = {Andrea Bisognin and
Gabriele Sales and
Alessandro Coppe and
Stefania Bortoluzzi and
Chiara Romualdi},
title = {MAGIA\({}^{\mbox{2}}\): from miRNA and genes expression data integrative
analysis to microRNA-transcription factor mixed regulatory circuits
{(2012} update)},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {13--21},
year = {2012},
url = {https://doi.org/10.1093/nar/gks460},
doi = {10.1093/NAR/GKS460},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BisogninSCBR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BledaMAMSD12,
author = {Marta Bleda and
Ignacio Medina and
Roberto Alonso and
Alejandro de Mar{\'{\i}}a and
Francisco Salavert and
Joaqu{\'{\i}}n Dopazo},
title = {Inferring the regulatory network behind a gene expression experiment},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {168--172},
year = {2012},
url = {https://doi.org/10.1093/nar/gks573},
doi = {10.1093/NAR/GKS573},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BledaMAMSD12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BledaTMSGCMDM12,
author = {Marta Bleda and
Joaqu{\'{\i}}n T{\'{a}}rraga and
Alejandro de Mar{\'{\i}}a and
Francisco Salavert and
Luz Garcia{-}Alonso and
Matilde Celma and
Ainoha Mart{\'{\i}}n and
Joaqu{\'{\i}}n Dopazo and
Ignacio Medina},
title = {CellBase, a comprehensive collection of RESTful web services for retrieving
relevant biological information from heterogeneous sources},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {609--614},
year = {2012},
url = {https://doi.org/10.1093/nar/gks575},
doi = {10.1093/NAR/GKS575},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BledaTMSGCMDM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BoerH12,
author = {Carl G. de Boer and
Timothy R. Hughes},
title = {YeTFaSCo: a database of evaluated yeast transcription factor sequence
specificities},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {169--179},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr993},
doi = {10.1093/NAR/GKR993},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BoerH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BolserCPGJASBGSHREBESPCRBB12,
author = {Dan M. Bolser and
Pierre{-}Yves Chibon and
Nicolas Palopoli and
Sungsam Gong and
Daniel Jacob and
Victoria Dominguez Del Angel and
Daniel Swan and
Sebastian Bassi and
Virginia Gonz{\'{a}}lez and
Prashanth Suravajhala and
Seungwoo Hwang and
Paolo Romano and
Rob Edwards and
Bryan Bishop and
John Eargle and
Timur Shtatland and
Nicholas J. Provart and
Dave Clements and
Daniel P. Renfro and
Daeui Park and
Jong Bhak},
title = {MetaBase - the wiki-database of biological databases},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1250--1254},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1099},
doi = {10.1093/NAR/GKR1099},
timestamp = {Fri, 30 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/BolserCPGJASBGSHREBESPCRBB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BondN12,
author = {Stephen R. Bond and
Christian C. Naus},
title = {RF-Cloning.org: an online tool for the design of restriction-free
cloning projects},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {209--213},
year = {2012},
url = {https://doi.org/10.1093/nar/gks396},
doi = {10.1093/NAR/GKS396},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BondN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BrandtBHZ12,
author = {Bernd W. Brandt and
Marc J. Bonder and
Susan M. Huse and
Egija Zaura},
title = {TaxMan: a server to trim rRNA reference databases and inspect taxonomic
coverage},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {82--87},
year = {2012},
url = {https://doi.org/10.1093/nar/gks418},
doi = {10.1093/NAR/GKS418},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BrandtBHZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BrazasYYO12,
author = {Michelle D. Brazas and
David S. Yim and
Winston Yeung and
B. F. Francis Ouellette},
title = {A decade of web server updates at the bioinformatics links directory:
2003-2012},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {3--12},
year = {2012},
url = {https://doi.org/10.1093/nar/gks632},
doi = {10.1093/NAR/GKS632},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BrazasYYO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BrevernBCEG12,
author = {Alexandre G. de Brevern and
Aur{\'{e}}lie Bornot and
Pierrick Craveur and
Catherine Etchebest and
Jean{-}Christophe Gelly},
title = {PredyFlexy: flexibility and local structure prediction from sequence},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {317--322},
year = {2012},
url = {https://doi.org/10.1093/nar/gks482},
doi = {10.1093/NAR/GKS482},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BrevernBCEG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BrittoSCMPC12,
author = {Ramona Britto and
Olivier Sallou and
Olivier Collin and
Gr{\'{e}}goire Michaux and
Michael Primig and
Fr{\'{e}}d{\'{e}}ric Chalmel},
title = {GPSy: a cross-species gene prioritization system for conserved biological
processes - application in male gamete development},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {458--465},
year = {2012},
url = {https://doi.org/10.1093/nar/gks380},
doi = {10.1093/NAR/GKS380},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BrittoSCMPC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BruckskottenLRBB12,
author = {Marc Bruckskotten and
Mario Looso and
Richard Reinhardt and
Thomas Braun and
Thilo Borchardt},
title = {Newt-omics: a comprehensive repository for omics data from the newt
\emph{Notophthalmus viridescens}},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {895--900},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr873},
doi = {10.1093/NAR/GKR873},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BruckskottenLRBB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BuYSXSMXLLZZLLCZ12,
author = {Dechao Bu and
Kuntao Yu and
Silong Sun and
Chaoyong Xie and
Geir Skogerb{\o} and
Ruoyu Miao and
Hui Xiao and
Qi Liao and
Haitao Luo and
Guoguang Zhao and
Haitao Zhao and
Zhiyong Liu and
Changning Liu and
Runsheng Chen and
Yi Zhao},
title = {{NONCODE} v3.0: integrative annotation of long noncoding RNAs},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {210--215},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1175},
doi = {10.1093/NAR/GKR1175},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/BuYSXSMXLLZZLLCZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CandalesDHLNSMWJZ12,
author = {Manuel A. Candales and
Adrian Duong and
Keyar S. Hood and
Tony Li and
Ryan A. E. Neufeld and
Runda Sun and
Bonnie A. McNeil and
Li Wu and
Ashley M. Jarding and
Steven Zimmerly},
title = {Database for bacterial group {II} introns},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {187--190},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1043},
doi = {10.1093/NAR/GKR1043},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CandalesDHLNSMWJZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CaputoBSRBL12,
author = {Sandrine Caputo and
Louisa Benboudjema and
Olga Sinilnikova and
Etienne Rouleau and
Christophe B{\'{e}}roud and
Rosette Lidereau},
title = {Description and analysis of genetic variants in French hereditary
breast and ovarian cancer families recorded in the {UMD-BRCA1/BRCA2}
databases},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {992--1002},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1160},
doi = {10.1093/NAR/GKR1160},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CaputoBSRBL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CariasoL12,
author = {Michael Cariaso and
Greg Lennon},
title = {SNPedia: a wiki supporting personal genome annotation, interpretation
and analysis},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1308--1312},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr798},
doi = {10.1093/NAR/GKR798},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CariasoL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CaspiADFSKKKLMOPPSTWZK12,
author = {Ron Caspi and
Tomer Altman and
Kate Dreher and
Carol A. Fulcher and
Pallavi Subhraveti and
Ingrid M. Keseler and
Anamika Kothari and
Markus Krummenacker and
Mario Latendresse and
Lukas A. Mueller and
Quang Ong and
Suzanne M. Paley and
Anuradha Pujar and
Alexander Glennon Shearer and
Michael Travers and
Deepika Weerasinghe and
Peifen Zhang and
Peter D. Karp},
title = {The MetaCyc database of metabolic pathways and enzymes and the BioCyc
collection of pathway/genome databases},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {742--753},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1014},
doi = {10.1093/NAR/GKR1014},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CaspiADFSKKKLMOPPSTWZK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CechSH12,
author = {Petr Cech and
Daniel Svozil and
David Hoksza},
title = {{SETTER:} web server for {RNA} structure comparison},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {42--48},
year = {2012},
url = {https://doi.org/10.1093/nar/gks560},
doi = {10.1093/NAR/GKS560},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/CechSH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChailyanTM12,
author = {Anna Chailyan and
Anna Tramontano and
Paolo Marcatili},
title = {A database of immunoglobulins with integrated tools: {DIGIT}},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1230--1234},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr806},
doi = {10.1093/NAR/GKR806},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ChailyanTM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChakrabortyGCMC12,
author = {Abhijit Chakraborty and
Sudeshna Ghosh and
Garisha Chowdhary and
Ujjwal Maulik and
Saikat Chakrabarti},
title = {{DBETH:} {A} Database of Bacterial Exotoxins for Human},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {615--620},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr942},
doi = {10.1093/NAR/GKR942},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ChakrabortyGCMC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChakrabortyMLPC12,
author = {Abhijit Chakraborty and
Sapan Mandloi and
Christopher J. Lanczycki and
Anna R. Panchenko and
Saikat Chakrabarti},
title = {{SPEER-SERVER:} a web server for prediction of protein specificity
determining sites},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {242--248},
year = {2012},
url = {https://doi.org/10.1093/nar/gks559},
doi = {10.1093/NAR/GKS559},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ChakrabortyMLPC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChanHSTL12,
author = {Patricia P. Chan and
Andrew D. Holmes and
Andrew M. Smith and
Danny Tran and
Todd M. Lowe},
title = {The {UCSC} Archaeal Genome Browser: 2012 update},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {646--652},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr990},
doi = {10.1093/NAR/GKR990},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ChanHSTL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChangYFCB12,
author = {Darby Tien{-}Hao Chang and
Tsung{-}Ju Yao and
Chen{-}Yu Fan and
Chih{-}Yun Chiang and
Yi{-}Han Bai},
title = {{AH-DB:} collecting protein structure pairs before and after binding},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {472--478},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr940},
doi = {10.1093/NAR/GKR940},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ChangYFCB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChenMLB12,
author = {Wei{-}Hua Chen and
Pablo Minguez and
Martin J. Lercher and
Peer Bork},
title = {{OGEE:} an online gene essentiality database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {901--906},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr986},
doi = {10.1093/NAR/GKR986},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ChenMLB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChenWL12,
author = {Yao Chi Chen and
Jon D. Wright and
Carmay Lim},
title = {DR{\_}bind: a web server for predicting DNA-binding residues from
the protein structure based on electrostatics, evolution and geometry},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {249--256},
year = {2012},
url = {https://doi.org/10.1093/nar/gks481},
doi = {10.1093/NAR/GKS481},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ChenWL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChenXSYJ12,
author = {Lihong Chen and
Zhaohui Xiong and
Lilian Sun and
Jian Yang and
Qi Jin},
title = {{VFDB} 2012 update: toward the genetic diversity and molecular evolution
of bacterial virulence factors},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {641--645},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr989},
doi = {10.1093/NAR/GKR989},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/ChenXSYJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChenYZZBMCC12,
author = {Dijun Chen and
Chunhui Yuan and
Jian Zhang and
Zhao Zhang and
Lin Bai and
Yijun Meng and
Ling{-}Ling Chen and
Ming Chen},
title = {PlantNATsDB: a comprehensive database of plant natural antisense transcripts},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1187--1193},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr823},
doi = {10.1093/NAR/GKR823},
timestamp = {Mon, 02 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ChenYZZBMCC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChengHYLTTWLCCY12,
author = {Yu{-}Chang Cheng and
Fang{-}Chih Hsiao and
Erh{-}Chan Yeh and
Wan{-}Jia Lin and
Cheng{-}Yang Louis Tang and
Huan{-}Chin Tseng and
Hsing{-}Tsung Wu and
Chuan{-}Kun Liu and
Chih{-}Cheng Chen and
Yuan{-}Tsong Chen and
Adam Yao},
title = {VarioWatch: providing large-scale and comprehensive annotations on
human genomic variants in the next generation sequencing era},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {76--81},
year = {2012},
url = {https://doi.org/10.1093/nar/gks397},
doi = {10.1093/NAR/GKS397},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ChengHYLTTWLCCY12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CherryHABBCCCDEFHHKKMNPSSWW12,
author = {J. Michael Cherry and
Eurie L. Hong and
Craig Amundsen and
Rama Balakrishnan and
Gail Binkley and
Esther T. Chan and
Karen R. Christie and
Maria C. Costanzo and
Selina S. Dwight and
Stacia R. Engel and
Dianna G. Fisk and
Jodi E. Hirschman and
Benjamin C. Hitz and
Kalpana Karra and
Cynthia J. Krieger and
Stuart R. Miyasato and
Robert S. Nash and
Julie Park and
Marek S. Skrzypek and
Matt Simison and
Shuai Weng and
Edith D. Wong},
title = {Saccharomyces Genome Database: the genomics resource of budding yeast},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {700--705},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1029},
doi = {10.1093/NAR/GKR1029},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CherryHABBCCCDEFHHKKMNPSSWW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ChienLLWCC12,
author = {Ting{-}Ying Chien and
Chih{-}Kang Lin and
Chih{-}Wei Lin and
Yi{-}Zhong Weng and
Chien{-}Yu Chen and
Darby Tien{-}Hao Chang},
title = {{DBD2BS:} connecting a DNA-binding protein with its binding sites},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {173--179},
year = {2012},
url = {https://doi.org/10.1093/nar/gks564},
doi = {10.1093/NAR/GKS564},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ChienLLWCC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ClarkAPE12,
author = {Karl J. Clark and
David P. Argue and
Andrew M. Petzold and
Stephen C. Ekker},
title = {zfishbook: connecting you to a world of zebrafish revertible mutants},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {907--911},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr957},
doi = {10.1093/NAR/GKR957},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ClarkAPE12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CollierLBK12,
author = {James H. Collier and
Arthur M. Lesk and
Maria Garcia de la Banda and
Arun Siddharth Konagurthu},
title = {Super: a web server to rapidly screen superposable oligopeptide fragments
from the protein data bank},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {334--339},
year = {2012},
url = {https://doi.org/10.1093/nar/gks436},
doi = {10.1093/NAR/GKS436},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CollierLBK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ContrinoSBCHLRKSCKLSWPRZLSM12,
author = {Sergio Contrino and
Richard N. Smith and
Daniela Butano and
Adrian Carr and
Fengyuan Hu and
Rachel Lyne and
Kim Rutherford and
Alex Kalderimis and
Julie M. Sullivan and
Seth Carbon and
Ellen T. Kephart and
Paul Lloyd and
E. O. Stinson and
Nicole L. Washington and
Marc D. Perry and
Peter Ruzanov and
Zheng Zha and
Suzanna E. Lewis and
Lincoln D. Stein and
Gos Micklem},
title = {modMine: flexible access to modENCODE data},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1082--1088},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr921},
doi = {10.1093/NAR/GKR921},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ContrinoSBCHLRKSCKLSWPRZLSM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CowleyPKWPGBHW12,
author = {Mark J. Cowley and
Mark Pinese and
Karin S. Kassahn and
Nic Waddell and
John V. Pearson and
Sean M. Grimmond and
Andrew V. Biankin and
Sampsa Hautaniemi and
Jianmin Wu},
title = {{PINA} v2.0: mining interactome modules},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {862--865},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr967},
doi = {10.1093/NAR/GKR967},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CowleyPKWPGBHW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CruzLLZWDSDW12,
author = {Joseph A. Cruz and
Yifeng Liu and
Yongjie Liang and
You Zhou and
Michael Wilson and
Jonathan J. Dennis and
Paul Stothard and
Gary H. Van Domselaar and
David S. Wishart},
title = {BacMap: an up-to-date electronic atlas of annotated bacterial genomes},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {599--604},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1105},
doi = {10.1093/NAR/GKR1105},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CruzLLZWDSDW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CukurogluGK12,
author = {Engin Cukuroglu and
Attila G{\"{u}}rsoy and
Ozlem Keskin},
title = {HotRegion: a database of predicted hot spot clusters},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {829--833},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr929},
doi = {10.1093/NAR/GKR929},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CukurogluGK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CulhaneSSPMKHKPFPGPOCQ12,
author = {Aed{\'{\i}}n C. Culhane and
Markus S. Schr{\"{o}}der and
Razvan Sultana and
Shaita C. Picard and
Enzo N. Martinelli and
Caroline Kelly and
Benjamin Haibe{-}Kains and
Misha Kapushesky and
Anne{-}Alyssa St Pierre and
William Flahive and
Kermshlise C. Picard and
Daniel Gusenleitner and
Gerald Papenhausen and
Niall O'Connor and
Mick Correll and
John Quackenbush},
title = {GeneSigDB: a manually curated database and resource for analysis of
gene expression signatures},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1060--1066},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr901},
doi = {10.1093/NAR/GKR901},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CulhaneSSPMKHKPFPGPOCQ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CuttsUSGLC12,
author = {Rosalind J. Cutts and
Abu Z. Dayem Ullah and
Ajanthah Sangaralingam and
Emanuela Gadaleta and
Nicholas R. Lemoine and
Claude Chelala},
title = {O-miner: an integrative platform for automated analysis and mining
of -omics data},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {560--568},
year = {2012},
url = {https://doi.org/10.1093/nar/gks432},
doi = {10.1093/NAR/GKS432},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/CuttsUSGLC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/DAntonioPSC12,
author = {Matteo D'Antonio and
Vera Pendino and
Shruti Sinha and
Francesca D. Ciccarelli},
title = {Network of Cancer Genes {(NCG} 3.0): integration and analysis of genetic
and network properties of cancer genes},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {978--983},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr952},
doi = {10.1093/NAR/GKR952},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/DAntonioPSC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/DashHHWD12,
author = {Sudhansu Dash and
John L. Van Hemert and
Lu Hong and
Roger P. Wise and
Julie A. Dickerson},
title = {PLEXdb: gene expression resources for plants and plant pathogens},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1194--1201},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr938},
doi = {10.1093/NAR/GKR938},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/DashHHWD12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/DimmerHA12,
author = {Emily C. Dimmer and
Rachael P. Huntley and
Yasmin Alam{-}Faruque and
Tony Sawford and
Claire O'Donovan and
Maria Jesus Martin and
Benoit Bely and
Paul Browne and
Wei Mun Chan and
Ruth Y. Eberhardt and
Michael Gardner and
Kati Laiho and
Duncan Legge and
Michele Magrane and
Klemens Pichler and
Diego Poggioli and
Harminder Sehra and
Andrea H. Auchincloss and
Kristian B. Axelsen and
Marie{-}Claude Blatter and
Emmanuel Boutet and
Silvia Braconi{-}Quintaje and
Lionel Breuza and
Alan J. Bridge and
Elisabeth Coudert and
Anne Estreicher and
Maria Livia Famiglietti and
Serenella Ferro{-}Rojas and
Marc Feuermann and
Arnaud Gos and
Nadine Gruaz{-}Gumowski and
Ursula Hinz and
Chantal Hulo and
Janet James and
Silvia Jimenez and
Florence Jungo and
Guillaume Keller and
Phillippe Lemercier and
Damien Lieberherr and
Patrick Masson and
Madelaine Moinat and
Ivo Pedruzzi and
Sylvain Poux and
Catherine Rivoire and
Bernd Roechert and
Michel Schneider and
Andre Stutz and
Shyamala Sundaram and
Michael Tognolli and
Lydie Bougueleret and
Ghislaine Argoud{-}Puy and
Isabelle Cusin and
Paula Duek{-}Roggli and
Ioannis Xenarios and
Rolf Apweiler},
title = {The UniProt-GO Annotation database in 2011},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {565--570},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1048},
doi = {10.1093/NAR/GKR1048},
timestamp = {Fri, 15 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/DimmerHA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/DinkelMWDRATUSBJDSHSJMDCLVCHGESMDG12,
author = {Holger Dinkel and
Sushama Michael and
Robert J. Weatheritt and
Norman E. Davey and
Kim Van Roey and
Brigitte Altenberg and
Grischa Toedt and
Bora Uyar and
Markus Seiler and
Aidan Budd and
Lisa J{\"{o}}dicke and
Marcel A. Dammert and
Christian Schroeter and
Maria Hammer and
Tobias Schmidt and
Peter Jehl and
Caroline McGuigan and
Magdalena Dymecka and
Claudia Chica and
Katja Luck and
Allegra Via and
Andrew Chatr{-}aryamontri and
Niall J. Haslam and
Gleb Grebnev and
Richard J. Edwards and
Michel O. Steinmetz and
Heike Meiselbach and
Francesca Diella and
Toby J. Gibson},
title = {{ELM} - the database of eukaryotic linear motifs},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {242--251},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1064},
doi = {10.1093/NAR/GKR1064},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/DinkelMWDRATUSBJDSHSJMDCLVCHGESMDG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/DoreleijersVSMUVV12,
author = {Jurgen F. Doreleijers and
Wim F. Vranken and
Christopher F. Schulte and
John L. Markley and
Eldon L. Ulrich and
Gert Vriend and
Geerten W. Vuister},
title = {{NRG-CING:} integrated validation reports of remediated experimental
biomolecular {NMR} data and coordinates in wwPDB},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {519--524},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1134},
doi = {10.1093/NAR/GKR1134},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/DoreleijersVSMUVV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/DoyleBSVBVB12,
author = {Erin L. Doyle and
Nicholas J. Booher and
Daniel S. Standage and
Daniel F. Voytas and
Volker P. Brendel and
John K. VanDyk and
Adam J. Bogdanove},
title = {{TAL} Effector-Nucleotide Targeter {(TALE-NT)} 2.0: tools for {TAL}
effector design and target prediction},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {117--122},
year = {2012},
url = {https://doi.org/10.1093/nar/gks608},
doi = {10.1093/NAR/GKS608},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/DoyleBSVBVB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/DreszerKZHRKMWSRRRPMLLKHHGGGFDCCBHK12,
author = {Timothy R. Dreszer and
Donna Karolchik and
Ann S. Zweig and
Angie S. Hinrichs and
Brian J. Raney and
Robert M. Kuhn and
Laurence R. Meyer and
Matthew C. Wong and
Cricket A. Sloan and
Kate R. Rosenbloom and
Greg Roe and
Brooke L. Rhead and
Andy Pohl and
Venkat S. Malladi and
Chin H. Li and
Katrina Learned and
Vanessa Kirkup and
Fan Hsu and
Rachel A. Harte and
Luvina Guruvadoo and
Mary Goldman and
Belinda Giardine and
Pauline A. Fujita and
Mark Diekhans and
Melissa S. Cline and
Hiram Clawson and
Galt P. Barber and
David Haussler and
W. James Kent},
title = {The {UCSC} Genome Browser database: extensions and updates 2011},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {918--923},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1055},
doi = {10.1093/NAR/GKR1055},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/DreszerKZHRKMWSRRRPMLLKHHGGGFDCCBHK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/EppigBBKRG12,
author = {Janan T. Eppig and
Judith A. Blake and
Carol J. Bult and
James A. Kadin and
Joel E. Richardson},
title = {The Mouse Genome Database {(MGD):} comprehensive resource for genetics
and genomics of the laboratory mouse},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {881--886},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr974},
doi = {10.1093/NAR/GKR974},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/EppigBBKRG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FaureAG12,
author = {Guilhem Faure and
Jessica Andreani and
Rapha{\"{e}}l Gu{\'{e}}rois},
title = {InterEvol database: exploring the structure and evolution of protein
complex interfaces},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {847--856},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr845},
doi = {10.1093/NAR/GKR845},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/FaureAG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Federhen12,
author = {Scott Federhen},
title = {The {NCBI} Taxonomy database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {136--143},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1178},
doi = {10.1093/NAR/GKR1178},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/Federhen12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FinnGB12,
author = {Robert D. Finn and
Paul P. Gardner and
Alex Bateman},
title = {Making your database available through Wikipedia: the pros and cons},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {9--12},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1195},
doi = {10.1093/NAR/GKR1195},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/FinnGB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FiumeSBSTMRWB12,
author = {Marc Fiume and
Eric J. M. Smith and
Andrew Brook and
Dario Strbenac and
Brian Turner and
Aziz M. Mezlini and
Mark D. Robinson and
Shoshana J. Wodak and
Michael Brudno},
title = {Savant Genome Browser 2: visualization and analysis for population-scale
genomics},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {615--621},
year = {2012},
url = {https://doi.org/10.1093/nar/gks427},
doi = {10.1093/NAR/GKS427},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/FiumeSBSTMRWB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FlamholzNBM12,
author = {Avi I. Flamholz and
Elad Noor and
Arren Bar{-}Even and
Ron Milo},
title = {eQuilibrator - the biochemical thermodynamics calculator},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {770--775},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr874},
doi = {10.1093/NAR/GKR874},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/FlamholzNBM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FlicekAB12,
author = {Paul Flicek and
M. Ridwan Amode and
Daniel Barrell and
Kathryn Beal and
Simon Brent and
Denise Carvalho{-}Silva and
Peter Clapham and
Guy Coates and
Susan Fairley and
Stephen Fitzgerald and
Laurent Gil and
Leo Gordon and
Maurice Hendrix and
Thibaut Hourlier and
Nathan Johnson and
Andreas K{\"{a}}h{\"{a}}ri and
Damian Keefe and
Stephen Keenan and
Rhoda Kinsella and
Monika Komorowska and
Gautier Koscielny and
Eugene Kulesha and
Pontus Larsson and
Ian Longden and
William M. McLaren and
Matthieu Muffato and
Bert Overduin and
Miguel Pignatelli and
Bethan Pritchard and
Harpreet Singh Riat and
Graham R. S. Ritchie and
Magali Ruffier and
Michael Schuster and
Daniel Sobral and
Y. Amy Tang and
Kieron R. Taylor and
Stephen J. Trevanion and
Jana Vandrovcova and
Simon White and
Mark Wilson and
Steven P. Wilder and
Bronwen L. Aken and
Ewan Birney and
Fiona Cunningham and
Ian Dunham and
Richard Durbin and
Xos{\'{e}} M. Fern{\'{a}}ndez{-}Su{\'{a}}rez and
Jennifer L. Harrow and
Javier Herrero and
Tim J. P. Hubbard and
Anne Parker and
Glenn Proctor and
Giulietta Spudich and
Jan Vogel and
Andy Yates and
Amonida Zadissa and
Stephen M. J. Searle},
title = {Ensembl 2012},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {84--90},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr991},
doi = {10.1093/NAR/GKR991},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/FlicekAB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FlockhartBHMGMPM12,
author = {Ian Flockhart and
Matthew Booker and
Yanhui Hu and
Benjamin McElvany and
Quentin Gilly and
Bernard Mathey{-}Prevot and
Norbert Perrimon and
Stephanie E. Mohr},
title = {FlyRNAi.org - the database of the \emph{Drosophila} RNAi screening
center: 2012 update},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {715--719},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr953},
doi = {10.1093/NAR/GKR953},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/FlockhartBHMGMPM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FukuchiSNMAHKHO12,
author = {Satoshi Fukuchi and
Shigetaka Sakamoto and
Yukiko Nobe and
Seiko D. Murakami and
Takayuki Amemiya and
Kazuo Hosoda and
Ryotaro Koike and
Hidekazu Hiroaki and
Motonori Ota},
title = {{IDEAL:} Intrinsically Disordered proteins with Extensive Annotations
and Literature},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {507--511},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr884},
doi = {10.1093/NAR/GKR884},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/FukuchiSNMAHKHO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FurnhamSHCRLOT12,
author = {Nicholas Furnham and
Ian Sillitoe and
Gemma L. Holliday and
Alison L. Cuff and
Syed Asad Rahman and
Roman A. Laskowski and
Christine A. Orengo and
Janet M. Thornton},
title = {FunTree: a resource for exploring the functional evolution of structurally
defined enzyme superfamilies},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {776--782},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr852},
doi = {10.1093/NAR/GKR852},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/FurnhamSHCRLOT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GabdoullineEKS12,
author = {Razif R. Gabdoulline and
Denitsa Eckweiler and
Alexander E. Kel and
Philip Stegmaier},
title = {3DTF: a web server for predicting transcription factor PWMs using
3D structure-based energy calculations},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {180--185},
year = {2012},
url = {https://doi.org/10.1093/nar/gks551},
doi = {10.1093/NAR/GKS551},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GabdoullineEKS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GalperinF12,
author = {Michael Y. Galperin and
Xos{\'{e}} M. Fern{\'{a}}ndez{-}Su{\'{a}}rez},
title = {The 2012 Nucleic Acids Research Database Issue and the online Molecular
Biology Database Collection},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1--8},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1196},
doi = {10.1093/NAR/GKR1196},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GalperinF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GandhimathiNS12,
author = {Arumugam Gandhimathi and
Anu G. Nair and
Ramanathan Sowdhamini},
title = {{PASS2} version 4: An update to the database of structure-based sequence
alignments of structural domain superfamilies},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {531--534},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1096},
doi = {10.1093/NAR/GKR1096},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GandhimathiNS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Garcia-GarciaSKO12,
author = {Javier Garc{\'{\i}}a{-}Garc{\'{\i}}a and
Sylvia Schleker and
Judith Klein{-}Seetharaman and
Baldo Oliva},
title = {{BIPS:} {BIANA} Interolog Prediction Server. {A} tool for protein-protein
interaction inference},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {147--151},
year = {2012},
url = {https://doi.org/10.1093/nar/gks553},
doi = {10.1093/NAR/GKS553},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/Garcia-GarciaSKO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GaultonBBCDHLMMAO12,
author = {Anna Gaulton and
Louisa J. Bellis and
A. Patr{\'{\i}}cia Bento and
Jon Chambers and
Mark Davies and
Anne Hersey and
Yvonne Light and
Shaun McGlinchey and
David Michalovich and
Bissan Al{-}Lazikani and
John P. Overington},
title = {ChEMBL: a large-scale bioactivity database for drug discovery},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1100--1107},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr777},
doi = {10.1093/NAR/GKR777},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GaultonBBCDHLMMAO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GilsenanCB12,
author = {Jane E. Mabey Gilsenan and
John Cooley and
Paul Bowyer},
title = {C\emph{A}DRE: the Central \emph{Aspergillus} Data REpository 2012},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {660--666},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr971},
doi = {10.1093/NAR/GKR971},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GilsenanCB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GofmanHB12,
author = {Yana Gofman and
Turkan Haliloglu and
Nir Ben{-}Tal},
title = {Monte Carlo simulations of peptide-membrane interactions with the
MCPep web server},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {358--363},
year = {2012},
url = {https://doi.org/10.1093/nar/gks577},
doi = {10.1093/NAR/GKS577},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GofmanHB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GoodCAS12,
author = {Benjamin M. Good and
Erik L. Clarke and
Luca de Alfaro and
Andrew I. Su},
title = {The Gene Wiki in 2011: community intelligence applied to human gene
annotation},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1255--1261},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr925},
doi = {10.1093/NAR/GKR925},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GoodCAS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GoodsteinSHNHFMDHPR12,
author = {David M. Goodstein and
Shengqiang Shu and
Russell Howson and
Rochak Neupane and
Richard D. Hayes and
Joni Fazo and
Therese Mitros and
William Dirks and
Uffe Hellsten and
Nicholas H. Putnam and
Daniel S. Rokhsar},
title = {Phytozome: a comparative platform for green plant genomics},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1178--1186},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr944},
doi = {10.1093/NAR/GKR944},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/GoodsteinSHNHFMDHPR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GostevFBFSBP12,
author = {Mikhail Gostev and
Adam Faulconbridge and
Marco Brandizi and
Julio Fernandez{-}Banet and
Ugis Sarkans and
Alvis Brazma and
Helen E. Parkinson},
title = {The BioSample Database (BioSD) at the European Bioinformatics Institute},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {64--70},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr937},
doi = {10.1093/NAR/GKR937},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GostevFBFSBP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GrazulisDMCLQSMDB12,
author = {Saulius Grazulis and
Adriana Daskevic and
Andrius Merkys and
Daniel Chateigner and
Luca Lutterotti and
Miguel Quir{\'{o}}s and
Nadezhda R. Serebryanaya and
Peter Moeck and
Robert T. Downs and
Armel Le Bail},
title = {Crystallography Open Database {(COD):} an open-access collection of
crystal structures and platform for world-wide collaboration},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {420--427},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr900},
doi = {10.1093/NAR/GKR900},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GrazulisDMCLQSMDB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GrigorievNSACGKMNOOPRRSRD12,
author = {Igor V. Grigoriev and
Henrik Nordberg and
Igor Shabalov and
Andrea Aerts and
Mike Cantor and
David M. Goodstein and
Alan Kuo and
Simon Minovitsky and
Roman Nikitin and
Robin A. Ohm and
Robert Otillar and
Alexander Poliakov and
Igor Ratnere and
Robert Riley and
Tatyana Smirnova and
Daniel Rokhsar and
Inna Dubchak},
title = {The Genome Portal of the Department of Energy Joint Genome Institute},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {26--32},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr947},
doi = {10.1093/NAR/GKR947},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GrigorievNSACGKMNOOPRRSRD12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GrontBWK12,
author = {Dominik Gront and
Maciej Blaszczyk and
Piotr Wojciechowski and
Andrzej Kolinski},
title = {BioShell Threader: protein homology detection based on sequence profiles
and secondary structure profiles},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {257--262},
year = {2012},
url = {https://doi.org/10.1093/nar/gks555},
doi = {10.1093/NAR/GKS555},
timestamp = {Fri, 22 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GrontBWK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GuptaVAVBS12,
author = {Anjali Bansal Gupta and
Ravi Kumar Verma and
Vatsal Agarwal and
Manu Vajpai and
Vivek Bansal and
Ramasubbu Sankararamakrishnan},
title = {MIPModDB: a central resource for the superfamily of major intrinsic
proteins},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {362--369},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr914},
doi = {10.1093/NAR/GKR914},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GuptaVAVBS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GyeneseiMLSHW12,
author = {Attila Gyenesei and
Jonathan Moody and
Asta Laiho and
Colin A. M. Semple and
Chris S. Haley and
Wenhua Wei},
title = {BiForce Toolbox: powerful high-throughput computational analysis of
gene-gene interactions in genome-wide association studies},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {628--632},
year = {2012},
url = {https://doi.org/10.1093/nar/gks550},
doi = {10.1093/NAR/GKS550},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GyeneseiMLSHW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Haibe-KainsODBCBQ12,
author = {Benjamin Haibe{-}Kains and
Catharina Olsen and
Amira Djebbari and
Gianluca Bontempi and
Mick Correll and
Christopher Bouton and
John Quackenbush},
title = {Predictive networks: a flexible, open source, web application for
integration and analysis of human gene networks},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {866--875},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1050},
doi = {10.1093/NAR/GKR1050},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/Haibe-KainsODBCBQ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Halling-BrownBPTA12,
author = {Mark D. Halling{-}Brown and
Krishna C. Bulusu and
Mishal N. Patel and
Joe E. Tym and
Bissan Al{-}Lazikani},
title = {canSAR: an integrated cancer public translational research and drug
discovery resource},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {947--956},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr881},
doi = {10.1093/NAR/GKR881},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/Halling-BrownBPTA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HamdaniA0AR12,
author = {Hazrina Yusof Hamdani and
Sri Devan Appasamy and
Peter Willett and
Peter J. Artymiuk and
Mohd Firdaus Raih},
title = {{NASSAM:} a server to search for and annotate tertiary interactions
and motifs in three-dimensional structures of complex {RNA} molecules},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {35--41},
year = {2012},
url = {https://doi.org/10.1093/nar/gks513},
doi = {10.1093/NAR/GKS513},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/HamdaniA0AR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HeZJYLSYHZLLWLZX12,
author = {Ying He and
Menghuan Zhang and
Yuanhu Ju and
Zhong{-}Hao Yu and
Daqing Lv and
Han Sun and
Weilan Yuan and
Fei He and
Jianshe Zhang and
Hong Li and
Jing Li and
Rui Wang{-}Sattler and
Yixue Li and
Guoqing Zhang and
Lu Xie},
title = {dbDEPC 2.0: updated database of differentially expressed proteins
in human cancers},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {964--971},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr936},
doi = {10.1093/NAR/GKR936},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/HeZJYLSYHZLLWLZX12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HeckerAEDMEGBP12,
author = {Nikolai Hecker and
Jessica Ahmed and
Joachim von Eichborn and
Mathias Dunkel and
Karel Macha and
Andreas Eckert and
Michael K. Gilson and
Philip E. Bourne and
Robert Preissner},
title = {SuperTarget goes quantitative: update on drug-target interactions},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1113--1117},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr912},
doi = {10.1093/NAR/GKR912},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/HeckerAEDMEGBP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HeifetsJ12,
author = {Abraham Heifets and
Igor Jurisica},
title = {{SCRIPDB:} a portal for easy access to syntheses, chemicals and reactions
in patents},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {428--433},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr919},
doi = {10.1093/NAR/GKR919},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/HeifetsJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HollidayAFRAWP12,
author = {Gemma L. Holliday and
Claudia Andreini and
Julia D. Fischer and
Syed Asad Rahman and
Daniel E. Almonacid and
Sophie T. Williams and
William R. Pearson},
title = {MACiE: exploring the diversity of biochemical reactions},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {783--789},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr799},
doi = {10.1093/NAR/GKR799},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/HollidayAFRAWP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HornbeckKTZSMLS12,
author = {Peter V. Hornbeck and
Jon M. Kornhauser and
Sasha Tkachev and
Bin Zhang and
Elzbieta Skrzypek and
Beth Murray and
Vaughan Latham and
Michael Sullivan},
title = {PhosphoSitePlus: a comprehensive resource for investigating the structure
and function of experimentally determined post-translational modifications
in man and mouse},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {261--270},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1122},
doi = {10.1093/NAR/GKR1122},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/HornbeckKTZSMLS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HuangRSM12,
author = {Yuanpeng Janet Huang and
Antonio Rosato and
Gautam Singh and
Gaetano T. Montelione},
title = {{RPF:} a quality assessment tool for protein {NMR} structures},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {542--546},
year = {2012},
url = {https://doi.org/10.1093/nar/gks373},
doi = {10.1093/NAR/GKS373},
timestamp = {Mon, 01 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/HuangRSM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HuangRZNYWDLGR12,
author = {Jian Huang and
Beibei Ru and
Ping Zhu and
Fulei Nie and
Jun Yang and
Xuyang Wang and
Ping Dai and
Hao Lin and
Feng{-}Biao Guo and
Nini Rao},
title = {MimoDB 2.0: a mimotope database and beyond},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {271--277},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr922},
doi = {10.1093/NAR/GKR922},
timestamp = {Thu, 08 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/HuangRZNYWDLGR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HunterJM12,
author = {Sarah Hunter and
Philip Jones and
Alex L. Mitchell and
Rolf Apweiler and
Teresa K. Attwood and
Alex Bateman and
Thomas Bernard and
David Binns and
Peer Bork and
Sarah W. Burge and
Edouard De Castro and
Penny C. Coggill and
Matthew Corbett and
Ujjwal Das and
Louise C. Daugherty and
Lauranne Duquenne and
Robert D. Finn and
Matthew Fraser and
Julian Gough and
Daniel H. Haft and
Nicolas Hulo and
Daniel Kahn and
Elizabeth Kelly and
Ivica Letunic and
David Lonsdale and
Rodrigo Lopez and
Martin Madera and
John Maslen and
Craig McAnulla and
Jennifer McDowall and
Conor McMenamin and
Huaiyu Mi and
Prudence Mutowo{-}Meullenet and
Nicola J. Mulder and
Darren A. Natale and
Christine A. Orengo and
Sebastien Pesseat and
Marco Punta and
Antony F. Quinn and
Catherine Rivoire and
Amaia Sangrador{-}Vegas and
Jeremy D. Selengut and
Christian J. A. Sigrist and
Maxim Scheremetjew and
John G. Tate and
Manjulapramila Thimmajanarthanan and
Paul D. Thomas and
Cathy H. Wu and
Corin Yeats and
Siew{-}Yit Yong},
title = {InterPro in 2011: new developments in the family and domain prediction
database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {306--312},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr948},
doi = {10.1093/NAR/GKR948},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/HunterJM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/InglisABSSWBMSS12,
author = {Diane O. Inglis and
Martha B. Arnaud and
Jonathan Binkley and
Prachi Shah and
Marek S. Skrzypek and
Farrell Wymore and
Gail Binkley and
Stuart R. Miyasato and
Matt Simison and
Gavin Sherlock},
title = {The \emph{Candida} genome database incorporates multiple \emph{Candida}
species: multispecies search and analysis tools with curated gene
and protein information for \emph{Candida albicans} and \emph{Candida
glabrata}},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {667--674},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr945},
doi = {10.1093/NAR/GKR945},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/InglisABSSWBMSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ItoTSTT12,
author = {Jun{-}Ichi Ito and
Yasuo Tabei and
Kana Shimizu and
Koji Tsuda and
Kentaro Tomii},
title = {PoSSuM: a database of similar protein-ligand binding and putative
pockets},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {541--548},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1130},
doi = {10.1093/NAR/GKR1130},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ItoTSTT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/JadeauGSMDC12,
author = {Fanny Jadeau and
Christophe Grangeasse and
Lei Shi and
Ivan Mijakovic and
Gilbert Del{\'{e}}age and
Christophe Combet},
title = {BYKdb: the Bacterial protein tYrosine Kinase database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {321--324},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr915},
doi = {10.1093/NAR/GKR915},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/JadeauGSMDC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/JaraschDBAHWB12,
author = {Alexander Jarasch and
Philipp Dziuk and
Thomas Becker and
Jean{-}Paul Armache and
Andreas Hauser and
Daniel N. Wilson and
Roland Beckmann},
title = {The {DARC} site: a database of aligned ribosomal complexes},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {495--500},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr824},
doi = {10.1093/NAR/GKR824},
timestamp = {Wed, 18 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/JaraschDBAHWB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/JenikPRTWF12,
author = {Michael Jenik and
R. Gonzalo Parra and
Leandro G. Radusky and
Adrian Gustavo Turjanski and
Peter G. Wolynes and
Diego U. Ferreiro},
title = {Protein frustratometer: a tool to localize energetic frustration in
protein molecules},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {348--351},
year = {2012},
url = {https://doi.org/10.1093/nar/gks447},
doi = {10.1093/NAR/GKS447},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/JenikPRTWF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/JewisonKNDGLLMKSWW12,
author = {Timothy Jewison and
Craig Knox and
Vanessa Neveu and
Yannick Djoumbou and
Anchi Guo and
Jacqueline Lee and
Philip Liu and
Rupasri Mandal and
Ram Krishnamurthy and
Igor Sinelnikov and
Michael Wilson and
David S. Wishart},
title = {{YMDB:} the Yeast Metabolome Database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {815--820},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr916},
doi = {10.1093/NAR/GKR916},
timestamp = {Fri, 25 Feb 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/JewisonKNDGLLMKSWW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/JinLVLMZVDABZ12,
author = {Ke Jin and
Jingjing Li and
Frederick S. Vizeacoumar and
Zhijian Li and
Renqiang Min and
Lee Zamparo and
Franco J. Vizeacoumar and
Alessandro Datti and
Brenda J. Andrews and
Charles Boone and
Zhaolei Zhang},
title = {PhenoM: a database of morphological phenotypes caused by mutation
of essential genes in \emph{Saccharomyces cerevisiae}},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {687--694},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr827},
doi = {10.1093/NAR/GKR827},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/JinLVLMZVDABZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/JutyNL12,
author = {Nick S. Juty and
Nicolas Le Nov{\`{e}}re and
Camille Laibe},
title = {Identifiers.org and {MIRIAM} Registry: community resources to provide
persistent identification},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {580--586},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1097},
doi = {10.1093/NAR/GKR1097},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/JutyNL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KaasYJDC12,
author = {Quentin Kaas and
Rilei Yu and
Ai{-}Hua Jin and
S{\'{e}}bastien Dutertre and
David J. Craik},
title = {ConoServer: updated content, knowledge, and discovery tools in the
conopeptide database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {325--330},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr886},
doi = {10.1093/NAR/GKR886},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KaasYJDC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KalininaWAR12,
author = {Olga V. Kalinina and
Oliver Wichmann and
Gordana Apic and
Robert B. Russell},
title = {ProtChemSI: a network of protein-chemical structural interactions},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {549--553},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1049},
doi = {10.1093/NAR/GKR1049},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KalininaWAR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KamburovSH12,
author = {Atanas Kamburov and
Ulrich Stelzl and
Ralf Herwig},
title = {IntScore: a web tool for confidence scoring of biological interactions},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {140--146},
year = {2012},
url = {https://doi.org/10.1093/nar/gks492},
doi = {10.1093/NAR/GKS492},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KamburovSH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KanehisaGSFT12,
author = {Minoru Kanehisa and
Susumu Goto and
Yoko Sato and
Miho Furumichi and
Mao Tanabe},
title = {{KEGG} for integration and interpretation of large-scale molecular
data sets},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {109--114},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr988},
doi = {10.1093/NAR/GKR988},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KanehisaGSFT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Kantardjiev12,
author = {Alexander A. Kantardjiev},
title = {Quantum.Ligand.Dock: protein-ligand docking with quantum entanglement
refinement on a {GPU} system},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {415--422},
year = {2012},
url = {https://doi.org/10.1093/nar/gks515},
doi = {10.1093/NAR/GKS515},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/Kantardjiev12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KaoSGHSCLJ12,
author = {Sen Kao and
Cheng{-}Kai Shiau and
De{-}Leung Gu and
Chun{-}Ming Ho and
Wen{-}Hui Su and
Chian{-}Feng Chen and
Chi{-}Hung Lin and
Yuh{-}Shan Jou},
title = {{IGDB.NSCLC:} integrated genomic database of non-small cell lung cancer},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {972--977},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1183},
doi = {10.1093/NAR/GKR1183},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KaoSGHSCLJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KapusheskyABCFFHKKKKMMPPRTTWZPB12,
author = {Misha Kapushesky and
Tomasz Adamusiak and
Tony Burdett and
Aed{\'{\i}}n C. Culhane and
Anna Farne and
Alexey Filippov and
Ele Holloway and
Andrey Klebanov and
Nataliya Kryvych and
Natalja Kurbatova and
Pavel Kurnosov and
James Malone and
Olga Melnichuk and
Robert Petryszak and
Nikolay Pultsin and
Gabriella Rustici and
Andrew Tikhonov and
Ravensara S. Travillian and
Eleanor Williams and
Andrey Zorin and
Helen E. Parkinson and
Alvis Brazma},
title = {Gene Expression Atlas update - a value-added database of microarray
and sequencing-based functional genomics experiments},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1077--1081},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr913},
doi = {10.1093/NAR/GKR913},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KapusheskyABCFFHKKKKMMPPRTTWZPB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Karsch-MizrachiNC12,
author = {Ilene Karsch{-}Mizrachi and
Yasukazu Nakamura and
Guy Cochrane},
title = {The International Nucleotide Sequence Database Collaboration},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {33--37},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1006},
doi = {10.1093/NAR/GKR1006},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/Karsch-MizrachiNC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KatoSAA12,
author = {Yuki Kato and
Kengo Sato and
Kiyoshi Asai and
Tatsuya Akutsu},
title = {Rtips: fast and accurate tools for {RNA} 2D structure prediction using
integer programming},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {29--34},
year = {2012},
url = {https://doi.org/10.1093/nar/gks412},
doi = {10.1093/NAR/GKS412},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KatoSAA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KayalaB12,
author = {Matthew A. Kayala and
Pierre Baldi},
title = {Cyber-T web server: differential analysis of high-throughput data},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {553--559},
year = {2012},
url = {https://doi.org/10.1093/nar/gks420},
doi = {10.1093/NAR/GKS420},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KayalaB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KelderIHKCEP12,
author = {Thomas Kelder and
Martijn P. van Iersel and
Kristina Hanspers and
Martina Kutmon and
Bruce R. Conklin and
Chris T. A. Evelo and
Alexander R. Pico},
title = {WikiPathways: building research communities on biological pathways},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1301--1307},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1074},
doi = {10.1093/NAR/GKR1074},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KelderIHKCEP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KellyHDC12,
author = {Libusha Kelly and
Katherine H. Huang and
Huiming Ding and
Sallie W. Chisholm},
title = {ProPortal: a resource for integrated systems biology of \emph{Prochlorococcus}
and its phage},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {632--640},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1022},
doi = {10.1093/NAR/GKR1022},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KellyHDC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KerrienABBBCDDFHJJKMMPPPRROH12,
author = {Samuel Kerrien and
Bruno Aranda and
Lionel Breuza and
Alan J. Bridge and
Fiona Broackes{-}Carter and
Carol Chen and
Margaret J. Duesbury and
Marine Dumousseau and
Marc Feuermann and
Ursula Hinz and
Christine Jandrasits and
Rafael C. Jim{\'{e}}nez and
Jyoti Khadake and
Usha Mahadevan and
Patrick Masson and
Ivo Pedruzzi and
Eric Pfeiffenberger and
Pablo Porras and
Arathi Raghunath and
Bernd Roechert and
Sandra E. Orchard and
Henning Hermjakob},
title = {The IntAct molecular interaction database in 2012},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {841--846},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1088},
doi = {10.1093/NAR/GKR1088},
timestamp = {Fri, 15 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/KerrienABBBCDDFHJJKMMPPPRROH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KerseySLKDHHKKKLMMMNPPTWYB12,
author = {Paul J. Kersey and
Daniel M. Staines and
Daniel Lawson and
Eugene Kulesha and
Paul S. Derwent and
Jay C. Humphrey and
Daniel S. T. Hughes and
Stephen Keenan and
Arnaud Kerhornou and
Gautier Koscielny and
Nicholas Langridge and
Mark D. McDowall and
Karine Megy and
Uma Maheswari and
Michael Nuhn and
Michael Paulini and
Helder Pedro and
Iliana Toneva and
Derek Wilson and
Andrew D. Yates and
Ewan Birney},
title = {Ensembl Genomes: an integrative resource for genome-scale data from
non-vertebrate species},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {91--97},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr895},
doi = {10.1093/NAR/GKR895},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KerseySLKDHHKKKLMMMNPPTWYB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KhareHSGGG12,
author = {Satyajeet P. Khare and
Farhat Habib and
Rahul Sharma and
Nikhil Gadewal and
Sanjay Gupta and
Sanjeev Galande},
title = {HIstome - a relational knowledgebase of human histone proteins and
histone modifying enzymes},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {337--342},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1125},
doi = {10.1093/NAR/GKR1125},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/KhareHSGGG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KimPZTWGLSLBNP12,
author = {Yohan Kim and
Julia V. Ponomarenko and
Zhanyang Zhu and
Dorjee Tamang and
Peng Wang and
Jason Greenbaum and
Claus Lundegaard and
Alessandro Sette and
Ole Lund and
Philip E. Bourne and
Morten Nielsen and
Bjoern Peters},
title = {Immune epitope database analysis resource},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {525--530},
year = {2012},
url = {https://doi.org/10.1093/nar/gks438},
doi = {10.1093/NAR/GKS438},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KimPZTWGLSLBNP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KinjoSYIKIKCSNN12,
author = {Akira R. Kinjo and
Hirofumi Suzuki and
Reiko Yamashita and
Yasuyo Ikegawa and
Takahiro Kudou and
Reiko Igarashi and
Yumiko Kengaku and
Hasumi Cho and
Daron M. Standley and
Atsushi Nakagawa and
Haruki Nakamura},
title = {Protein Data Bank Japan (PDBj): maintaining a structural data archive
and resource description framework format},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {453--460},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr811},
doi = {10.1093/NAR/GKR811},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/KinjoSYIKIKCSNN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KleinboeltingHKVW12,
author = {Nils Kleinb{\"{o}}lting and
Gunnar Huep and
Andreas Kloetgen and
Prisca Viehoever and
Bernd Weisshaar},
title = {GABI-Kat SimpleSearch: new features of the \emph{Arabidopsis thaliana}
{T-DNA} mutant database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1211--1215},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1047},
doi = {10.1093/NAR/GKR1047},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/KleinboeltingHKVW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KloseWJ12,
author = {D. P. Klose and
B. A. Wallace and
Robert W. Janes},
title = {DichroMatch: a website for similarity searching of circular dichroism
spectra},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {547--552},
year = {2012},
url = {https://doi.org/10.1093/nar/gks449},
doi = {10.1093/NAR/GKS449},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KloseWJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KoPHS12,
author = {Junsu Ko and
Hahnbeom Park and
Lim Heo and
Chaok Seok},
title = {GalaxyWEB server for protein structure prediction and refinement},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {294--297},
year = {2012},
url = {https://doi.org/10.1093/nar/gks493},
doi = {10.1093/NAR/GKS493},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KoPHS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KodamaMKGOTON12,
author = {Yuichi Kodama and
Jun Mashima and
Eli Kaminuma and
Takashi Gojobori and
Osamu Ogasawara and
Toshihisa Takagi and
Kousaku Okubo and
Yasukazu Nakamura},
title = {The {DNA} Data Bank of Japan launches a new resource, the {DDBJ} Omics
Archive of functional genomics experiments},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {38--42},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr994},
doi = {10.1093/NAR/GKR994},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KodamaMKGOTON12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KodamaSL12,
author = {Yuichi Kodama and
Martin Shumway and
Rasko Leinonen},
title = {The sequence read archive: explosive growth of sequencing data},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {54--56},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr854},
doi = {10.1093/NAR/GKR854},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KodamaSL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KoesC12,
author = {David Ryan Koes and
Carlos J. Camacho},
title = {PocketQuery: protein-protein interaction inhibitor starting points
from protein-protein interaction structure},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {387--392},
year = {2012},
url = {https://doi.org/10.1093/nar/gks336},
doi = {10.1093/NAR/GKS336},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/KoesC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KoesC12a,
author = {David Ryan Koes and
Carlos J. Camacho},
title = {ZINCPharmer: pharmacophore search of the {ZINC} database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {409--414},
year = {2012},
url = {https://doi.org/10.1093/nar/gks378},
doi = {10.1093/NAR/GKS378},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/KoesC12a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KohBSKKM12,
author = {Judice L. Y. Koh and
Kevin R. Brown and
Azin Sayad and
Dahlia Kasimer and
Troy Ketela and
Jason Moffat},
title = {COLT-Cancer: functional genetic screening resource for essential genes
in human cancer cell lines},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {957--963},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr959},
doi = {10.1093/NAR/GKR959},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/KohBSKKM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KolkerHHWBLSK12,
author = {Eugene Kolker and
Roger Higdon and
Winston Haynes and
Dean Welch and
William Broomall and
Doron Lancet and
Larissa Stanberry and
Natali Kolker},
title = {{MOPED:} Model Organism Protein Expression Database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1093--1099},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1177},
doi = {10.1093/NAR/GKR1177},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KolkerHHWBLSK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KoncJ12,
author = {Janez Konc and
Dusanka Janezic},
title = {ProBiS-2012: web server and web services for detection of structurally
similar binding sites in proteins},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {214--221},
year = {2012},
url = {https://doi.org/10.1093/nar/gks435},
doi = {10.1093/NAR/GKS435},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KoncJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KoteraYMKG12,
author = {Masaaki Kotera and
Yoshihiro Yamanishi and
Yuki Moriya and
Minoru Kanehisa and
Susumu Goto},
title = {{GENIES:} gene network inference engine based on supervised analysis},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {162--167},
year = {2012},
url = {https://doi.org/10.1093/nar/gks459},
doi = {10.1093/NAR/GKS459},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KoteraYMKG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KouaBLKFRLS12,
author = {Dominique Koua and
Age Brauer and
Silja Laht and
Lauris Kaplinski and
Philippe Favreau and
Maido Remm and
Fr{\'{e}}d{\'{e}}rique Lisacek and
Reto St{\"{o}}cklin},
title = {ConoDictor: a tool for prediction of conopeptide superfamilies},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {238--241},
year = {2012},
url = {https://doi.org/10.1093/nar/gks337},
doi = {10.1093/NAR/GKS337},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KouaBLKFRLS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KozmaST12,
author = {D{\'{a}}niel Kozma and
Istv{\'{a}}n Simon and
G{\'{a}}bor E. Tusn{\'{a}}dy},
title = {CMWeb: an interactive on-line tool for analysing residue-residue contacts
and contact prediction methods},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {329--333},
year = {2012},
url = {https://doi.org/10.1093/nar/gks488},
doi = {10.1093/NAR/GKS488},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/KozmaST12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KrugerAG12,
author = {Dennis M. Kr{\"{u}}ger and
Aqeel Ahmed and
Holger Gohlke},
title = {NMSim Web Server: integrated approach for normal mode-based geometric
simulations of biologically relevant conformational transitions in
proteins},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {310--316},
year = {2012},
url = {https://doi.org/10.1093/nar/gks478},
doi = {10.1093/NAR/GKS478},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KrugerAG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KuangHZPSK12,
author = {Xingyan Kuang and
Jing Ginger Han and
Nan Zhao and
Bin Pang and
Chi{-}Ren Shyu and
Dmitry Korkin},
title = {{DOMMINO:} a database of macromolecular interactions},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {501--506},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1128},
doi = {10.1093/NAR/GKR1128},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KuangHZPSK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KuchtaBGPK12,
author = {Krzysztof Kuchta and
Daniela Barszcz and
Elzbieta Grzesiuk and
Pawel Pomorski and
Joanna Krwawicz},
title = {DNA\emph{traffic} - a new database for systems biology of {DNA} dynamics
during the cell life},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1235--1240},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr962},
doi = {10.1093/NAR/GKR962},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KuchtaBGPK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KufarevaIA12,
author = {Irina Kufareva and
Andrey V. Ilatovskiy and
Ruben Abagyan},
title = {Pocketome: an encyclopedia of small-molecule binding sites in 4D},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {535--540},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr825},
doi = {10.1093/NAR/GKR825},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KufarevaIA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KuhnSFMJB12,
author = {Michael Kuhn and
Damian Szklarczyk and
Andrea Franceschini and
Christian von Mering and
Lars Juhl Jensen and
Peer Bork},
title = {{STITCH} 3: zooming in on protein-chemical interactions},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {876--880},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1011},
doi = {10.1093/NAR/GKR1011},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KuhnSFMJB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KuikenTDY12,
author = {Carla Kuiken and
James Thurmond and
Mira Dimitrijevic and
Hyejin Yoon},
title = {The {LANL} hemorrhagic fever virus database, a new platform for analyzing
biothreat viruses},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {587--592},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr898},
doi = {10.1093/NAR/GKR898},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KuikenTDY12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KumarSB12,
author = {Sujai Kumar and
Philipp H. Schiffer and
Mark L. Blaxter},
title = {959 Nematode Genomes: a semantic wiki for coordinating sequencing
projects},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1295--1300},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr826},
doi = {10.1093/NAR/GKR826},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KumarSB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KunikAO12,
author = {Vered Kunik and
Shaul Ashkenazi and
Yanay Ofran},
title = {Paratome: an online tool for systematic identification of antigen-binding
regions in antibodies based on sequence or structure},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {521--524},
year = {2012},
url = {https://doi.org/10.1093/nar/gks480},
doi = {10.1093/NAR/GKS480},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KunikAO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KwonYSJKSJP12,
author = {Dongseop Kwon and
Jong Hwan Yoon and
Soo{-}Yong Shin and
Tae{-}Ho Jang and
Hong{-}Gee Kim and
Insuk So and
Ju{-}Hong Jeon and
Hyun Ho Park},
title = {A comprehensive manually curated protein-protein interaction database
for the Death Domain superfamily},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {331--336},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1149},
doi = {10.1093/NAR/GKR1149},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KwonYSJKSJP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LaiCH12,
author = {Yan{-}Long Lai and
Chih{-}Chieh Chen and
Jenn{-}Kang Hwang},
title = {pKNOT v.2: the protein {KNOT} web server},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {228--231},
year = {2012},
url = {https://doi.org/10.1093/nar/gks592},
doi = {10.1093/NAR/GKS592},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LaiCH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LameschBLSWSMDAGKLNPSWH12,
author = {Philippe Lamesch and
Tanya Z. Berardini and
Donghui Li and
David Swarbreck and
Christopher Wilks and
Rajkumar Sasidharan and
Robert J. Muller and
Kate Dreher and
Debbie L. Alexander and
Margarita Garcia{-}Hernandez and
Athikkattuvalasu S. Karthikeyan and
Cynthia H. Lee and
William D. Nelson and
Larry Ploetz and
Shanker Singh and
April Wensel and
Eva Huala},
title = {The Arabidopsis Information Resource {(TAIR):} improved gene annotation
and new tools},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1202--1210},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1090},
doi = {10.1093/NAR/GKR1090},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LameschBLSWSMDAGKLNPSWH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LaneABCDEGGGMZB12,
author = {Lydie Lane and
Ghislaine Argoud{-}Puy and
Aurore Britan and
Isabelle Cusin and
Paula D. Duek and
Olivier Evalet and
Alain Gateau and
Pascale Gaudet and
Anne Gleizes and
Alexandre Masselot and
Catherine Zwahlen and
Amos Bairoch},
title = {neXtProt: a knowledge platform for human proteins},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {76--83},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1179},
doi = {10.1093/NAR/GKR1179},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/LaneABCDEGGGMZB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LangeHO12,
author = {Philipp F. Lange and
Pitter F. Huesgen and
Christopher M. Overall},
title = {TopFIND 2.0 - linking protein termini with proteolytic processing
and modifications altering protein function},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {351--361},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1025},
doi = {10.1093/NAR/GKR1025},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LangeHO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LanghorstJRN12,
author = {Bradley W. Langhorst and
William E. Jack and
Linda Reha{-}Krantz and
Nicole M. Nichols},
title = {Polbase: a repository of biochemical, genetic and structural information
about {DNA} polymerases},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {381--387},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr847},
doi = {10.1093/NAR/GKR847},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LanghorstJRN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LeesYPSRDO12,
author = {Jonathan G. Lees and
Corin Yeats and
James Richard Perkins and
Ian Sillitoe and
Robert Rentzsch and
Benoit H. Dessailly and
Christine A. Orengo},
title = {Gene3D: a domain-based resource for comparative genomics, functional
annotation and protein network analysis},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {465--471},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1181},
doi = {10.1093/NAR/GKR1181},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LeesYPSRDO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LetunicDB12,
author = {Ivica Letunic and
Tobias Doerks and
Peer Bork},
title = {{SMART} 7: recent updates to the protein domain annotation resource},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {302--305},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr931},
doi = {10.1093/NAR/GKR931},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LetunicDB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LiDLZ12,
author = {Jun Li and
Xinbin Dai and
Tingsong Liu and
Patrick Xuechun Zhao},
title = {LegumeIP: an integrative database for comparative genomics and transcriptomics
of model legumes},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1221--1229},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr939},
doi = {10.1093/NAR/GKR939},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LiDLZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LiRCVGW12,
author = {Fan Li and
Paul Ryvkin and
Daniel M. Childress and
Otto Valladares and
Brian D. Gregory and
Li{-}San Wang},
title = {SAVoR: a server for sequencing annotation and visualization of {RNA}
structures},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {59--64},
year = {2012},
url = {https://doi.org/10.1093/nar/gks310},
doi = {10.1093/NAR/GKS310},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LiRCVGW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LiRGL12,
author = {Jun Li and
Paul Roebuck and
Stefan Gr{\"{u}}newald and
Han Liang},
title = {SurvNet: a web server for identifying network-based biomarkers that
most correlate with patient survival data},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {123--126},
year = {2012},
url = {https://doi.org/10.1093/nar/gks386},
doi = {10.1093/NAR/GKS386},
timestamp = {Thu, 24 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LiRGL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LiRMSUYOB12,
author = {Jing{-}Woei Li and
Keith Robison and
Marcel Martin and
Andreas Sj{\"{o}}din and
Bj{\"{o}}rn Usadel and
Matthew Young and
Eric C. Olivares and
Dan M. Bolser},
title = {The SEQanswers wiki: a wiki database of tools for high-throughput
sequencing analysis},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1313--1317},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1058},
doi = {10.1093/NAR/GKR1058},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LiRMSUYOB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LiWLLWYWSCW12,
author = {Mulin Jun Li and
Panwen Wang and
Xiaorong Liu and
Ee Lyn Lim and
Zhangyong Wang and
Meredith Yeager and
Maria P. Wong and
Pak Chung Sham and
Stephen J. Chanock and
Junwen Wang},
title = {GWASdb: a database for human genetic variants identified by genome-wide
association studies},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1047--1054},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1182},
doi = {10.1093/NAR/GKR1182},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LiWLLWYWSCW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LicataBPPIGSPNSCC12,
author = {Luana Licata and
Leonardo Briganti and
Daniele Peluso and
Livia Perfetto and
Marta Iannuccelli and
Eugenia Galeota and
Francesca Sacco and
Anita Palma and
Aurelio Nardozza and
Elena Santonico and
Luisa Castagnoli and
Gianni Cesareni},
title = {MINT, the molecular interaction database: 2012 update},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {857--861},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr930},
doi = {10.1093/NAR/GKR930},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/LicataBPPIGSPNSCC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LinLYLY12,
author = {Chun{-}Yu Lin and
Yi{-}Wei Lin and
Shang{-}Wen Yu and
Yu{-}Shu Lo and
Jinn{-}Moon Yang},
title = {MoNetFamily: a web server to infer homologous modules and module-module
interaction networks in vertebrates},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {263--270},
year = {2012},
url = {https://doi.org/10.1093/nar/gks541},
doi = {10.1093/NAR/GKS541},
timestamp = {Thu, 05 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LinLYLY12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LindermanCB12,
author = {George C. Linderman and
Mark R. Chance and
G{\"{u}}rkan Bebek},
title = {{MAGNET:} MicroArray Gene expression and Network Evaluation Toolkit},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {152--156},
year = {2012},
url = {https://doi.org/10.1093/nar/gks526},
doi = {10.1093/NAR/GKS526},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LindermanCB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LoWLDHL12,
author = {Wei{-}Cheng Lo and
Li{-}Fen Wang and
Yen{-}Yi Liu and
Tian Dai and
Jenn{-}Kang Hwang and
Ping{-}Chiang Lyu},
title = {CPred: a web server for predicting viable circular permutations in
proteins},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {232--237},
year = {2012},
url = {https://doi.org/10.1093/nar/gks529},
doi = {10.1093/NAR/GKS529},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/LoWLDHL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LoboRRHSTMFAF12,
author = {Francisco Pereira Lobo and
Ma{\'{\i}}ra R. Rodrigues and
Gisele O. L. Rodrigues and
Heron O. Hil{\'{a}}rio and
Raoni A. Souza and
Andreas Tauch and
Anderson Miyoshi and
Glaura C. Franco and
Vasco Ariston de Carvalho Azevedo and
Gl{\'{o}}ria R. Franco},
title = {{KOMODO:} a web tool for detecting and visualizing biased distribution
of groups of homologous genes in monophyletic taxa},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {491--497},
year = {2012},
url = {https://doi.org/10.1093/nar/gks490},
doi = {10.1093/NAR/GKS490},
timestamp = {Wed, 24 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LoboRRHSTMFAF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Logan-KlumplerSBRVMCAOSPFMRWTJHPHHBMRCSHB12,
author = {Flora J. Logan{-}Klumpler and
Nishadi De Silva and
Ulrike B{\"{o}}hme and
Matthew B. Rogers and
Giles Velarde and
Jacqueline A. McQuillan and
Tim Carver and
Martin Aslett and
Christian Olsen and
Sandhya Subramanian and
Isabelle Phan and
Carol Farris and
Siddhartha Mitra and
Gowthaman Ramasamy and
Haiming Wang and
Adrian Tivey and
Andrew Jackson and
Robin Houston and
Julian Parkhill and
Matthew T. G. Holden and
Omar S. Harb and
Brian P. Brunk and
Peter J. Myler and
David S. Roos and
Mark Carrington and
Deborah F. Smith and
Christiane Hertz{-}Fowler and
Matthew Berriman},
title = {GeneDB - an annotation database for pathogens},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {98--108},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1032},
doi = {10.1093/NAR/GKR1032},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/Logan-KlumplerSBRVMCAOSPFMRWTJHPHHBMRCSHB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LohseBNFLSU12,
author = {Marc Lohse and
Anthony M. Bolger and
Axel Nagel and
Alisdair R. Fernie and
John E. Lunn and
Mark Stitt and
Bj{\"{o}}rn Usadel},
title = {\emph{R}obi\emph{NA}: a user-friendly, integrated software solution
for RNA-Seq-based transcriptomics},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {622--627},
year = {2012},
url = {https://doi.org/10.1093/nar/gks540},
doi = {10.1093/NAR/GKS540},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LohseBNFLSU12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LomizePJML12,
author = {Mikhail A. Lomize and
Irina D. Pogozheva and
Hyeon Joo and
Henry I. Mosberg and
Andrei L. Lomize},
title = {{OPM} database and {PPM} web server: resources for positioning of
proteins in membranes},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {370--376},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr703},
doi = {10.1093/NAR/GKR703},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LomizePJML12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LuehrHS12,
author = {Sebastian Luehr and
Holger Hartmann and
Johannes S{\"{o}}ding},
title = {The XXmotif web server for eXhaustive, weight matriX-based motif discovery
in nucleotide sequences},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {104--109},
year = {2012},
url = {https://doi.org/10.1093/nar/gks602},
doi = {10.1093/NAR/GKS602},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LuehrHS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LuoLDNL12,
author = {Hong Luo and
Ke Lin and
Audrey David and
Harm Nijveen and
Jack A. M. Leunissen},
title = {ProRepeat: an integrated repository for studying amino acid tandem
repeats in proteins},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {394--399},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1019},
doi = {10.1093/NAR/GKR1019},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LuoLDNL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LuuRWLPRMMRWLTPN12,
author = {Tien{-}Dao Luu and
Alin Rusu and
Vincent Walter and
Benjamin Linard and
Laetitia Poidevin and
Raymond Ripp and
Luc Moulinier and
Jean Muller and
Wolfgang Raffelsberger and
Nicolas Wicker and
Odile Lecompte and
Julie Dawn Thompson and
Olivier Poch and
Hoan Nguyen},
title = {KD4v: comprehensible knowledge discovery system for missense variant},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {71--75},
year = {2012},
url = {https://doi.org/10.1093/nar/gks474},
doi = {10.1093/NAR/GKS474},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/LuuRWLPRMMRWLTPN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/LvLSWLLXWWZ12,
author = {Jie Lv and
Hongbo Liu and
Jianzhong Su and
Xueting Wu and
Hui Liu and
Boyan Li and
Xue Xiao and
Fang Wang and
Qiong Wu and
Yan Zhang},
title = {DiseaseMeth: a human disease methylation database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1030--1035},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1169},
doi = {10.1093/NAR/GKR1169},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/LvLSWLLXWWZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MaddatuGBB12,
author = {Terry P. Maddatu and
Stephen C. Grubb and
Carol J. Bult and
Molly A. Bogue},
title = {Mouse Phenome Database {(MPD)}},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {887--894},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1061},
doi = {10.1093/NAR/GKR1061},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MaddatuGBB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MadejAFGGLLLMPCTWZB12,
author = {Thomas Madej and
Kenneth J. Addess and
Jessica H. Fong and
Lewis Y. Geer and
Renata C. Geer and
Christopher J. Lanczycki and
Chunlei Liu and
Shennan Lu and
Aron Marchler{-}Bauer and
Anna R. Panchenko and
Jie Chen and
Paul A. Thiessen and
Yanli Wang and
Dachuan Zhang and
Stephen H. Bryant},
title = {{MMDB:} 3D structures and macromolecular interactions},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {461--464},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1162},
doi = {10.1093/NAR/GKR1162},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/MadejAFGGLLLMPCTWZB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MaderSFS12,
author = {Ulrike M{\"{a}}der and
Arne G. Schmeisky and
Lope A. Fl{\'{o}}rez and
J{\"{o}}rg St{\"{u}}lke},
title = {\emph{Subti}Wiki - a comprehensive community resource for the model
organism \emph{Bacillus subtilis}},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1278--1287},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr923},
doi = {10.1093/NAR/GKR923},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MaderSFS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MadupuRDBHDSSH12,
author = {Ramana Madupu and
Alexander R. Richter and
Robert J. Dodson and
Lauren M. Brinkac and
Derek M. Harkins and
A. Scott Durkin and
Susmita Shrivastava and
Granger G. Sutton and
Daniel H. Haft},
title = {CharProtDB: a database of experimentally characterized protein annotations},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {237--241},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1133},
doi = {10.1093/NAR/GKR1133},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MadupuRDBHDSSH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MagarinosCCRRSVA12,
author = {Mar{\'{\i}}a P. Magari{\~{n}}os and
Santiago J. Carmona and
Gregory J. Crowther and
Stuart A. Ralph and
David S. Roos and
Dhanasekaran Shanmugam and
Wesley C. Van Voorhis and
Fern{\'{a}}n Ag{\"{u}}ero},
title = {{TDR} Targets: a chemogenomics resource for neglected diseases},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1118--1127},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1053},
doi = {10.1093/NAR/GKR1053},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MagarinosCCRRSVA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MarkowitzCCSPGRJPHLPAMIK12,
author = {Victor M. Markowitz and
I{-}Min A. Chen and
Ken Chu and
Ernest Szeto and
Krishna Palaniappan and
Yuri Grechkin and
Anna Ratner and
Biju Jacob and
Amrita Pati and
Marcel Huntemann and
Konstantinos Liolios and
Ioanna Pagani and
Iain Anderson and
Konstantinos Mavrommatis and
Natalia Ivanova and
Nikos Kyrpides},
title = {{IMG/M:} the integrated metagenome data management and comparative
analysis system},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {123--129},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr975},
doi = {10.1093/NAR/GKR975},
timestamp = {Sat, 19 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MarkowitzCCSPGRJPHLPAMIK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MarkowitzCPCSGRJHWHAMIK12,
author = {Victor M. Markowitz and
I{-}Min A. Chen and
Krishna Palaniappan and
Ken Chu and
Ernest Szeto and
Yuri Grechkin and
Anna Ratner and
Biju Jacob and
Jinghua Huang and
Peter Williams and
Marcel Huntemann and
Iain Anderson and
Konstantinos Mavrommatis and
Natalia Ivanova and
Nikos Kyrpides},
title = {{IMG:} the integrated microbial genomes database and comparative analysis
system},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {115--122},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1044},
doi = {10.1093/NAR/GKR1044},
timestamp = {Sat, 19 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MarkowitzCPCSGRJHWHAMIK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MartinAHTM12,
author = {John C. Martin and
Sahar Abubucker and
Esley Heizer and
Christina M. Taylor and
Makedonka Dautova Mitreva},
title = {Nematode.net update 2011: addition of data sets and tools featuring
next-generation sequencing data},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {720--728},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1194},
doi = {10.1093/NAR/GKR1194},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MartinAHTM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MaruyamaKNING12,
author = {Yukio Maruyama and
Yoshifumi Kawamura and
Tetsuo Nishikawa and
Takao Isogai and
Nobuo Nomura and
Naoki Goshima},
title = {{HGPD:} Human Gene and Protein Database, 2012 update},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {924--929},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1188},
doi = {10.1093/NAR/GKR1188},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MaruyamaKNING12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MathivananFRS12,
author = {Suresh Mathivanan and
Cassie J. Fahner and
Gavin E. Reid and
Richard J. Simpson},
title = {ExoCarta 2012: database of exosomal proteins, {RNA} and lipids},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1241--1244},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr828},
doi = {10.1093/NAR/GKR828},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MathivananFRS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/McIntoshRKLLNSVZSH12,
author = {Brenley K. McIntosh and
Daniel P. Renfro and
Gwendowlyn S. Knapp and
Chanchala R. Lairikyengbam and
Nathan M. Liles and
Lili Niu and
Amanda M. Supak and
Anand Venkatraman and
Adrienne E. Zweifel and
Deborah A. Siegele and
James C. Hu},
title = {EcoliWiki: a wiki-based community resource for \emph{Escherichia coli}},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1270--1277},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr880},
doi = {10.1093/NAR/GKR880},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/McIntoshRKLLNSVZSH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/McQuiltonPT12,
author = {Peter McQuilton and
Susan E. St. Pierre and
Jim Thurmond},
title = {FlyBase 101 - the basics of navigating FlyBase},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {706--714},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1030},
doi = {10.1093/NAR/GKR1030},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/McQuiltonPT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MedinaMBSAGD12,
author = {Ignacio Medina and
Alejandro de Mar{\'{\i}}a and
Marta Bleda and
Francisco Salavert and
Roberto Alonso and
Cristina Y. Gonz{\'{a}}lez and
Joaqu{\'{\i}}n Dopazo},
title = {{VARIANT:} Command Line, Web service and Web interface for fast and
accurate functional characterization of variants found by Next-Generation
Sequencing},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {54--58},
year = {2012},
url = {https://doi.org/10.1093/nar/gks572},
doi = {10.1093/NAR/GKS572},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MedinaMBSAGD12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MedvedevaDKI12,
author = {Irina V. Medvedeva and
Pavel Demenkov and
Nikolay A. Kolchanov and
Vladimir A. Ivanisenko},
title = {SitEx: a computer system for analysis of projections of protein functional
sites on eukaryotic genes},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {278--283},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1187},
doi = {10.1093/NAR/GKR1187},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/MedvedevaDKI12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MegyELCDHKLMRSTW12,
author = {Karine Megy and
Scott J. Emrich and
Daniel Lawson and
David Campbell and
Emmanuel Dialynas and
Daniel S. T. Hughes and
Gautier Koscielny and
Christos Louis and
Robert M. MacCallum and
Seth Redmond and
Andrew Sheehan and
Pantelis Topalis and
Derek Wilson},
title = {VectorBase: improvements to a bioinformatics resource for invertebrate
vector genomics},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {729--734},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1089},
doi = {10.1093/NAR/GKR1089},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MegyELCDHKLMRSTW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MenendezFB12,
author = {Camille Menendez and
Scott Frees and
Paramjeet Singh Bagga},
title = {{QGRS-H} Predictor: a web server for predicting homologous quadruplex
forming G-rich sequence motifs in nucleotide sequences},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {96--103},
year = {2012},
url = {https://doi.org/10.1093/nar/gks422},
doi = {10.1093/NAR/GKS422},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MenendezFB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MeoDGLBPCPG12,
author = {Paolo D'Onorio De Meo and
Mattia D'Antonio and
Francesca Griggio and
Renato Lupi and
Massimiliano Borsani and
Giulio Pavesi and
Tiziana Castrignan{\`{o}} and
Graziano Pesole and
Carmela Gissi},
title = {MitoZoa 2.0: a database resource and search tools for comparative
and evolutionary analyses of mitochondrial genomes in Metazoa},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1168--1172},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1144},
doi = {10.1093/NAR/GKR1144},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MeoDGLBPCPG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MiMDGBBLRRSSWRS12,
author = {Tian Mi and
Jerlin Camilus Merlin and
Sandeep Deverasetty and
Michael R. Gryk and
Travis J. Bill and
Andrew W. Brooks and
Logan Y. Lee and
Viraj Rathnayake and
Christian A. Ross and
David P. Sargeant and
Christy L. Strong and
Paula Watts and
Sanguthevar Rajasekaran and
Martin R. Schiller},
title = {Minimotif Miner 3.0: database expansion and significantly improved
reduction of false-positive predictions from consensus sequences},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {252--260},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1189},
doi = {10.1093/NAR/GKR1189},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MiMDGBBLRRSSWRS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MorgatCCAKBBBXV12,
author = {Anne Morgat and
Eric Coissac and
Elisabeth Coudert and
Kristian B. Axelsen and
Guillaume Keller and
Amos Bairoch and
Alan J. Bridge and
Lydie Bougueleret and
Ioannis Xenarios and
Alain Viari},
title = {UniPathway: a resource for the exploration and annotation of metabolic
pathways},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {761--769},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1023},
doi = {10.1093/NAR/GKR1023},
timestamp = {Fri, 15 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/MorgatCCAKBBBXV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/NadzirinG0AR12,
author = {Nurul Nadzirin and
Eleanor J. Gardiner and
Peter Willett and
Peter J. Artymiuk and
Mohd Firdaus Raih},
title = {{SPRITE} and {ASSAM:} web servers for side chain 3D-motif searching
in protein structures},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {380--386},
year = {2012},
url = {https://doi.org/10.1093/nar/gks401},
doi = {10.1093/NAR/GKS401},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/NadzirinG0AR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/NaitoB12,
author = {Yuki Naito and
Hidemasa Bono},
title = {{GGRNA:} an ultrafast, transcript-oriented search engine for genes
and transcripts},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {592--596},
year = {2012},
url = {https://doi.org/10.1093/nar/gks448},
doi = {10.1093/NAR/GKS448},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/NaitoB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/NewburgerNGBDBJ12,
author = {Daniel E. Newburger and
Georges Natsoulis and
Sue Grimes and
John M. Bell and
Ronald W. Davis and
Serafim Batzoglou and
Hanlee P. Ji},
title = {The Human OligoGenome Resource: a database of oligonucleotide capture
probes for resequencing target regions across the human genome},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1137--1143},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr973},
doi = {10.1093/NAR/GKR973},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/NewburgerNGBDBJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/NganBMBVHKV12,
author = {Chi{-}Ho Ngan and
Tanggis Bohnuud and
Scott E. Mottarella and
Dmitri Beglov and
Elizabeth A. Villar and
David R. Hall and
Dima Kozakov and
Sandor Vajda},
title = {{FTMAP:} extended protein mapping with user-selected probe molecules},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {271--275},
year = {2012},
url = {https://doi.org/10.1093/nar/gks441},
doi = {10.1093/NAR/GKS441},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/NganBMBVHKV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/NovichkovBNDADR12,
author = {Pavel S. Novichkov and
Thomas S. Brettin and
Elena S. Novichkova and
Paramvir S. Dehal and
Adam P. Arkin and
Inna Dubchak and
Dmitry A. Rodionov},
title = {RegPrecise web services interface: programmatic access to the transcriptional
regulatory interactions in bacteria reconstructed by comparative genomics},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {604--608},
year = {2012},
url = {https://doi.org/10.1093/nar/gks562},
doi = {10.1093/NAR/GKS562},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/NovichkovBNDADR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/OttIMG12,
author = {Alban Ott and
Anouar Idali and
Antonin Marchais and
Daniel Gautheret},
title = {{NAPP:} the Nucleic Acid Phylogenetic Profile Database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {205--209},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr807},
doi = {10.1093/NAR/GKR807},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/OttIMG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PacheCA12,
author = {Roland A. Pache and
Arnaud C{\'{e}}ol and
Patrick Aloy},
title = {NetAligner - a network alignment server to compare complexes, pathways
and whole interactomes},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {157--161},
year = {2012},
url = {https://doi.org/10.1093/nar/gks446},
doi = {10.1093/NAR/GKS446},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/PacheCA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PaganiLJCSNMK12,
author = {Ioanna Pagani and
Konstantinos Liolios and
Jakob Jansson and
I{-}Min A. Chen and
Tatyana Smirnova and
Bahador Nosrat and
Victor M. Markowitz and
Nikos Kyrpides},
title = {The Genomes OnLine Database {(GOLD)} v.4: status of genomic and metagenomic
projects and their associated metadata},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {571--579},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1100},
doi = {10.1093/NAR/GKR1100},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/PaganiLJCSNMK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PallejaHEJ12,
author = {Albert Pallej{\`{a}} and
Heiko Horn and
Sabrina Eliasson and
Lars Juhl Jensen},
title = {DistiLD Database: diseases and traits in linkage disequilibrium blocks},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1036--1040},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr899},
doi = {10.1093/NAR/GKR899},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/PallejaHEJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PangKZKS12,
author = {Bin Pang and
Xingyan Kuang and
Nan Zhao and
Dmitry Korkin and
Chi{-}Ren Shyu},
title = {PBSword: a web server for searching similar protein-protein binding
sites},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {428--434},
year = {2012},
url = {https://doi.org/10.1093/nar/gks527},
doi = {10.1093/NAR/GKS527},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/PangKZKS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PatnaikHB12,
author = {Santosh Kumar Patnaik and
Wolfgang Helmberg and
Olga O. Blumenfeld},
title = {{BGMUT:} {NCBI} dbRBC database of allelic variations of genes encoding
antigens of blood group systems},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1023--1029},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr958},
doi = {10.1093/NAR/GKR958},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/PatnaikHB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PaulingRTAB12,
author = {Josch Pauling and
Richard R{\"{o}}ttger and
Andreas Tauch and
Vasco Ariston de Carvalho Azevedo and
Jan Baumbach},
title = {CoryneRegNet 6.0 - Updated database content, new analysis methods
and novel features focusing on community demands},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {610--614},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr883},
doi = {10.1093/NAR/GKR883},
timestamp = {Wed, 24 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/PaulingRTAB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PickettSZNSHLKZGZLDKS12,
author = {Brett E. Pickett and
Eva L. Sadat and
Yun Zhang and
Jyothi Noronha and
R. Burke Squires and
Victoria Hunt and
Mengya Liu and
Sanjeev Kumar and
Sam Zaremba and
Zhiping Gu and
Liwei Zhou and
Christopher N. Larsen and
Jonathan Dietrich and
Edward B. Klem and
Richard H. Scheuermann},
title = {ViPR: an open bioinformatics database and analysis resource for virology
research},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {593--598},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr859},
doi = {10.1093/NAR/GKR859},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/PickettSZNSHLKZGZLDKS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PowellSTRKMARLDJMB12,
author = {Sean Powell and
Damian Szklarczyk and
Kalliopi Trachana and
Alexander Roth and
Michael Kuhn and
Jean Muller and
Roland Arnold and
Thomas Rattei and
Ivica Letunic and
Tobias Doerks and
Lars Juhl Jensen and
Christian von Mering and
Peer Bork},
title = {eggNOG v3.0: orthologous groups covering 1133 organisms at 41 different
taxonomic ranges},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {284--289},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1060},
doi = {10.1093/NAR/GKR1060},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/PowellSTRKMARLDJMB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Pratt-SzeligaSYWW12,
author = {Philip C. Pratt{-}Szeliga and
Aaron D. Skewes and
Jinyuan Yan and
Laura G. Welch and
Roy D. Welch},
title = {Xanthusbase after five years expands to become Openmods},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1288--1294},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1054},
doi = {10.1093/NAR/GKR1054},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/Pratt-SzeligaSYWW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PruittTBM12,
author = {Kim D. Pruitt and
Tatiana A. Tatusova and
Garth R. Brown and
Donna R. Maglott},
title = {{NCBI} Reference Sequences (RefSeq): current status, new features
and genome annotation policy},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {130--135},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1079},
doi = {10.1093/NAR/GKR1079},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/PruittTBM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PuntaCEMTBPFCCHHSEBF12,
author = {Marco Punta and
Penny C. Coggill and
Ruth Y. Eberhardt and
Jaina Mistry and
John G. Tate and
Chris Boursnell and
Ningze Pang and
Kristoffer Forslund and
Goran Ceric and
Jody Clements and
Andreas Heger and
Liisa Holm and
Erik L. L. Sonnhammer and
Sean R. Eddy and
Alex Bateman and
Robert D. Finn},
title = {The Pfam protein families database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {290--301},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1065},
doi = {10.1093/NAR/GKR1065},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/PuntaCEMTBPFCCHHSEBF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/QuZZLWZYZ12,
author = {Wubin Qu and
Yang Zhou and
Yanchun Zhang and
Yiming Lu and
Xiaolei Wang and
Dongsheng Zhao and
Yi Yang and
Chenggang Zhang},
title = {MFEprimer-2.0: a fast thermodynamics-based program for checking {PCR}
primer specificity},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {205--208},
year = {2012},
url = {https://doi.org/10.1093/nar/gks552},
doi = {10.1093/NAR/GKS552},
timestamp = {Tue, 13 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/QuZZLWZYZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RajeevanSKPK12,
author = {Haseena Rajeevan and
Usha Soundararajan and
Judith R. Kidd and
Andrew J. Pakstis and
Kenneth K. Kidd},
title = {{ALFRED:} an allele frequency resource for research and teaching},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1010--1015},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr924},
doi = {10.1093/NAR/GKR924},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/RajeevanSKPK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RappoportKSLL12,
author = {Nadav Rappoport and
Solange Karsenty and
Amos Stern and
Nathan Linial and
Michal Linial},
title = {ProtoNet 6.0: organizing 10 million protein sequences in a compact
hierarchical family tree},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {313--320},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1027},
doi = {10.1093/NAR/GKR1027},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/RappoportKSLL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RawlingsBB12,
author = {Neil D. Rawlings and
Alan J. Barrett and
Alex Bateman},
title = {\emph{MEROPS}: the database of proteolytic enzymes, their substrates
and inhibitors},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {343--350},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr987},
doi = {10.1093/NAR/GKR987},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/RawlingsBB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RenaudBPANM12,
author = {Yoan Renaud and
Alexandre Baillif and
Jean{-}Baptiste Perez and
Marie Agier and
Engelbert Mephu Nguifo and
Vincent Mirouse},
title = {DroPNet: a web portal for integrated analysis of \emph{Drosophila}
protein-protein interaction networks},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {134--139},
year = {2012},
url = {https://doi.org/10.1093/nar/gks434},
doi = {10.1093/NAR/GKS434},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/RenaudBPANM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RenfroMVSH12,
author = {Daniel P. Renfro and
Brenley K. McIntosh and
Anand Venkatraman and
Deborah A. Siegele and
James C. Hu},
title = {{GONUTS:} the Gene Ontology Normal Usage Tracking System},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1262--1269},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr907},
doi = {10.1093/NAR/GKR907},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/RenfroMVSH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Riva12,
author = {Alberto Riva},
title = {The MAPPER\({}_{\mbox{2}}\) Database: a multi-genome catalog of putative
transcription factor binding sites},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {155--161},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1080},
doi = {10.1093/NAR/GKR1080},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/Riva12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RodriguesLC12,
author = {Jo{\~{a}}o P. G. L. M. Rodrigues and
Michael Levitt and
Gaurav Chopra},
title = {KoBaMIN: a knowledge-based minimization web server for protein structure
refinement},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {323--328},
year = {2012},
url = {https://doi.org/10.1093/nar/gks376},
doi = {10.1093/NAR/GKS376},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/RodriguesLC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RosenbloomDLMSRCKBCDFGGHHKKLMMPRWZHK12,
author = {Kate R. Rosenbloom and
Timothy R. Dreszer and
Jeffrey C. Long and
Venkat S. Malladi and
Cricket A. Sloan and
Brian J. Raney and
Melissa S. Cline and
Donna Karolchik and
Galt P. Barber and
Hiram Clawson and
Mark Diekhans and
Pauline A. Fujita and
Mary Goldman and
Robert C. Gravell and
Rachel A. Harte and
Angie S. Hinrichs and
Vanessa Kirkup and
Robert M. Kuhn and
Katrina Learned and
Morgan Maddren and
Laurence R. Meyer and
Andy Pohl and
Brooke L. Rhead and
Matthew C. Wong and
Ann S. Zweig and
David Haussler and
W. James Kent},
title = {{ENCODE} whole-genome data in the {UCSC} Genome Browser: update 2012},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {912--917},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1012},
doi = {10.1093/NAR/GKR1012},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/RosenbloomDLMSRCKBCDFGGHHKKLMMPRWZHK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RoyYZ12,
author = {Ambrish Roy and
Jianyi Yang and
Yang Zhang},
title = {{COFACTOR:} an accurate comparative algorithm for structure-based
protein function annotation},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {471--477},
year = {2012},
url = {https://doi.org/10.1093/nar/gks372},
doi = {10.1093/NAR/GKS372},
timestamp = {Tue, 04 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/RoyYZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RubinoPCSLCPPGA12,
author = {Francesco Rubino and
Roberta Piredda and
Francesco Maria Calabrese and
Domenico Simone and
Martin Lang and
Claudia Calabrese and
Vittoria Petruzzella and
Mila Tommaseo Ponzetta and
Giuseppe Gasparre and
Marcella Attimonelli},
title = {HmtDB, a genomic resource for mitochondrion-based human variability
studies},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1150--1159},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1086},
doi = {10.1093/NAR/GKR1086},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/RubinoPCSLCPPGA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SayersBBBBCCCDFFFGHKKLLLMMMMMKOPPPSSSSSSSSTWWWYY12,
author = {Eric W. Sayers and
Tanya Barrett and
Dennis A. Benson and
Evan Bolton and
Stephen H. Bryant and
Kathi Canese and
Vyacheslav Chetvernin and
Deanna M. Church and
Michael DiCuccio and
Scott Federhen and
Michael Feolo and
Ian M. Fingerman and
Lewis Y. Geer and
Wolfgang Helmberg and
Yuri Kapustin and
Sergey Krasnov and
David Landsman and
David J. Lipman and
Zhiyong Lu and
Thomas L. Madden and
Tom Madej and
Donna R. Maglott and
Aron Marchler{-}Bauer and
Vadim Miller and
Ilene Karsch{-}Mizrachi and
James Ostell and
Anna R. Panchenko and
Lon Phan and
Kim D. Pruitt and
Gregory D. Schuler and
Edwin Sequeira and
Stephen T. Sherry and
Martin Shumway and
Karl Sirotkin and
Douglas J. Slotta and
Alexandre Souvorov and
Grigory Starchenko and
Tatiana A. Tatusova and
Lukas Wagner and
Yanli Wang and
W. John Wilbur and
Eugene Yaschenko and
Jian Ye},
title = {Database resources of the National Center for Biotechnology Information},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {13--25},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1184},
doi = {10.1093/NAR/GKR1184},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SayersBBBBCCCDFFFGHKKLLLMMMMMKOPPPSSSSSSSSTWWWYY12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SchnablSS12,
author = {Joachim Schnabl and
Pascal Suter and
Roland K. O. Sigel},
title = {{MINAS} - a database of \emph{M}etal \emph{I}ons in \emph{N}ucleic
\emph{A}cid\emph{S}},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {434--438},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr920},
doi = {10.1093/NAR/GKR920},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SchnablSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SchreiberCCGHJJKSW12,
author = {Falk Schreiber and
Christian Colmsee and
Tobias Czauderna and
Eva Grafahrend{-}Belau and
Anja Hartmann and
Astrid Junker and
Bj{\"{o}}rn H. Junker and
Matthias Klapperst{\"{u}}ck and
Uwe Scholz and
Stephan Weise},
title = {MetaCrop 2.0: managing and exploring information about crop plant
metabolism},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1173--1177},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1004},
doi = {10.1093/NAR/GKR1004},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SchreiberCCGHJJKSW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SchrimlANCMFFK12,
author = {Lynn M. Schriml and
Cesar Arze and
Suvarna Nadendla and
Yu{-}Wei Wayne Chang and
Mark Mazaitis and
Victor Felix and
Gang Feng and
Warren A. Kibbe},
title = {Disease Ontology: a backbone for disease semantic integration},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {940--946},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr972},
doi = {10.1093/NAR/GKR972},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SchrimlANCMFFK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SchultzBAGMZDS12,
author = {Anne{-}Kathrin Schultz and
Ingo Bulla and
Mariama Abdou{-}Chekaraou and
Emmanuel Gordien and
Burkhard Morgenstern and
Fabien Zoulim and
Paul D{\'{e}}ny and
Mario Stanke},
title = {jpHMM: recombination analysis in viruses with circular genomes such
as the hepatitis {B} virus},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {193--198},
year = {2012},
url = {https://doi.org/10.1093/nar/gks414},
doi = {10.1093/NAR/GKS414},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SchultzBAGMZDS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SeelowS12,
author = {Dominik Seelow and
Markus Schuelke},
title = {HomozygosityMapper2012 - bridging the gap between homozygosity mapping
and deep sequencing},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {516--520},
year = {2012},
url = {https://doi.org/10.1093/nar/gks487},
doi = {10.1093/NAR/GKS487},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/SeelowS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SeguraOF12,
author = {Joan Segura and
Baldomero Oliva and
Narcis Fernandez{-}Fuentes},
title = {CAPS-\emph{DB}: a structural classification of helix-capping motifs},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {479--485},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr879},
doi = {10.1093/NAR/GKR879},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SeguraOF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SeoK12,
author = {Sangjae Seo and
Moon Ki Kim},
title = {{KOSMOS:} a universal morph server for nucleic acids, proteins and
their complexes},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {531--536},
year = {2012},
url = {https://doi.org/10.1093/nar/gks525},
doi = {10.1093/NAR/GKS525},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SeoK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ShoemakerZTTFMBMP12,
author = {Benjamin A. Shoemaker and
Dachuan Zhang and
Manoj Tyagi and
Ratna R. Thangudu and
Jessica H. Fong and
Aron Marchler{-}Bauer and
Stephen H. Bryant and
Thomas Madej and
Anna R. Panchenko},
title = {{IBIS} (Inferred Biomolecular Interaction Server) reports, predicts
and integrates multiple types of conserved interactions for proteins},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {834--840},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr997},
doi = {10.1093/NAR/GKR997},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ShoemakerZTTFMBMP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SimKHHSN12,
author = {Ngak{-}Leng Sim and
Prateek Kumar and
Jing Hu and
Steven Henikoff and
Georg Schneider and
Pauline C. Ng},
title = {{SIFT} web server: predicting effects of amino acid substitutions
on proteins},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {452--457},
year = {2012},
url = {https://doi.org/10.1093/nar/gks539},
doi = {10.1093/NAR/GKS539},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SimKHHSN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SinghCGR12,
author = {Harinder Singh and
Jagat Singh Chauhan and
M. Michael Gromiha and
Gajendra P. S. Raghava},
title = {ccPDB: compilation and creation of data sets from Protein Data Bank},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {486--489},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1150},
doi = {10.1093/NAR/GKR1150},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SinghCGR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SiowNMN12,
author = {Cheuk C. Siow and
Sian R. Nieduszynska and
Carolin A. M{\"{u}}ller and
Conrad A. Nieduszynski},
title = {OriDB, the {DNA} replication origin database updated and extended},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {682--686},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1091},
doi = {10.1093/NAR/GKR1091},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SiowNMN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SmithBR12,
author = {Anthony C. Smith and
James A. Blackshaw and
Alan J. Robinson},
title = {MitoMiner: a data warehouse for mitochondrial proteomics data},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1160--1167},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1101},
doi = {10.1093/NAR/GKR1101},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SmithBR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SorescuMMBW12,
author = {Dragos Alexandru Sorescu and
Mathias M{\"{o}}hl and
Martin Mann and
Rolf Backofen and
Sebastian Will},
title = {{CARNA} - alignment of {RNA} structure ensembles},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {49--53},
year = {2012},
url = {https://doi.org/10.1093/nar/gks491},
doi = {10.1093/NAR/GKS491},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SorescuMMBW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SpivakS12,
author = {Aaron T. Spivak and
Gary D. Stormo},
title = {ScerTF: a comprehensive database of benchmarked position weight matrices
for \emph{Saccharomyces} species},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {162--168},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1180},
doi = {10.1093/NAR/GKR1180},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SpivakS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SreenivasaiahRCAK12,
author = {Pradeep Kumar Sreenivasaiah and
Shilpa Rani and
Joseph Cayetano and
Novino Arul and
Do Han Kim},
title = {{IPAVS:} Integrated Pathway Resources, Analysis and Visualization
System},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {803--808},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1208},
doi = {10.1093/NAR/GKR1208},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SreenivasaiahRCAK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/StajichHBBFHKLNPSR12,
author = {Jason E. Stajich and
Todd W. Harris and
Brian P. Brunk and
John Brestelli and
Steve Fischer and
Omar S. Harb and
Jessica C. Kissinger and
Wei Li and
Vishal Nayak and
Deborah F. Pinney and
Christian J. Stoeckert Jr. and
David S. Roos},
title = {FungiDB: an integrated functional genomics database for fungi},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {675--681},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr918},
doi = {10.1093/NAR/GKR918},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/StajichHBBFHKLNPSR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SugimotoINTSS12,
author = {Masahiro Sugimoto and
Satsuki Ikeda and
Kanako Niigata and
Masaru Tomita and
Hideyo Sato and
Tomoyoshi Soga},
title = {{MMMDB:} Mouse Multiple Tissue Metabolome Database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {809--814},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1170},
doi = {10.1093/NAR/GKR1170},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SugimotoINTSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SuiBRCMRMAHSKSACCSHH12,
author = {Shannan J. Ho Sui and
Kimberly Begley and
Dorothy Reilly and
Brad Chapman and
Ray McGovern and
Philippe Rocca{-}Serra and
Eamonn Maguire and
Gabriel M. Altschuler and
Terah A. A. Hansen and
Ramakrishna Sompallae and
Andrei Krivtsov and
Ramesh A. Shivdasani and
Scott A. Armstrong and
Aed{\'{\i}}n C. Culhane and
Mick Correll and
Susanna{-}Assunta Sansone and
Oliver Hofmann and
Winston Hide},
title = {The Stem Cell Discovery Engine: an integrated repository and analysis
system for cancer stem cell comparisons},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {984--991},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1051},
doi = {10.1093/NAR/GKR1051},
timestamp = {Thu, 25 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SuiBRCMRMAHSKSACCSHH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SunTXCL12,
author = {Jiangming Sun and
Shengnan Tang and
Wenwei Xiong and
Peisheng Cong and
Tonghua Li},
title = {{DSP:} a protein shape string and its profile prediction server},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {298--302},
year = {2012},
url = {https://doi.org/10.1093/nar/gks361},
doi = {10.1093/NAR/GKS361},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SunTXCL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SundararajanGPACLAB12,
author = {Vijayaraghava Seshadri Sundararajan and
Musa Nur Gabere and
Ashley Pretorius and
Saleem Adam and
Alan Christoffels and
Minna Lehv{\"{a}}slaiho and
John A. C. Archer and
Vladimir B. Bajic},
title = {{DAMPD:} a manually curated antimicrobial peptide database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1108--1112},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1063},
doi = {10.1093/NAR/GKR1063},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SundararajanGPACLAB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SzczesniakDGKM12,
author = {Michal Wojciech Szczesniak and
Sebastian Deorowicz and
Jakub Gapski and
Lukasz Kaczynski and
Izabela Makalowska},
title = {miRNEST database: an integrative approach in microRNA search and annotation},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {198--204},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1159},
doi = {10.1093/NAR/GKR1159},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SzczesniakDGKM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Tabas-MadridNP12,
author = {Daniel Tabas{-}Madrid and
Rub{\'{e}}n Nogales{-}Cadenas and
Alberto D. Pascual{-}Montano},
title = {GeneCodis3: a non-redundant and modular enrichment analysis tool for
functional genomics},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {478--483},
year = {2012},
url = {https://doi.org/10.1093/nar/gks402},
doi = {10.1093/NAR/GKS402},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/Tabas-MadridNP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/TaboadaCMM12,
author = {Blanca Taboada and
Ricardo Ciria and
Cristian E. Martinez{-}Guerrero and
Enrique Merino},
title = {\emph{ProOpDB}: \emph{Pro}karyotic \emph{Op}eron \emph{D}ata\emph{B}ase},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {627--631},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1020},
doi = {10.1093/NAR/GKR1020},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/TaboadaCMM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/TaylorPLBJS12,
author = {Gregory K. Taylor and
Lucas H. Petrucci and
Abigail R. Lambert and
Sarah K. Baxter and
Jordan Jarjour and
Barry L. Stoddard},
title = {{LAHEDES:} the {LAGLIDADG} homing endonuclease database and engineering
server},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {110--116},
year = {2012},
url = {https://doi.org/10.1093/nar/gks365},
doi = {10.1093/NAR/GKS365},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/TaylorPLBJS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ThakurQK12,
author = {Nishant Thakur and
Abid Qureshi and
Manoj Kumar},
title = {VIRsiRNAdb: a curated database of experimentally validated viral siRNA/shRNA},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {230--236},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1147},
doi = {10.1093/NAR/GKR1147},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ThakurQK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ThakurQK12a,
author = {Nishant Thakur and
Abid Qureshi and
Manoj Kumar},
title = {AVPpred: collection and prediction of highly effective antiviral peptides},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {199--204},
year = {2012},
url = {https://doi.org/10.1093/nar/gks450},
doi = {10.1093/NAR/GKS450},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ThakurQK12a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ThevenetSMGDT12,
author = {Pierre Th{\'{e}}venet and
Yimin Shen and
Julien Maupetit and
Fr{\'{e}}d{\'{e}}ric Guyon and
Philippe Derreumaux and
Pierre Tuff{\'{e}}ry},
title = {{PEP-FOLD:} an updated \emph{de novo} structure prediction server
for both linear and disulfide bonded cyclic peptides},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {288--293},
year = {2012},
url = {https://doi.org/10.1093/nar/gks419},
doi = {10.1093/NAR/GKS419},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ThevenetSMGDT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ThomasSVAL12,
author = {Philippe Thomas and
Johannes Starlinger and
Alexander Vowinkel and
Sebastian Arzt and
Ulf Leser},
title = {GeneView: a comprehensive semantic search engine for PubMed},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {585--591},
year = {2012},
url = {https://doi.org/10.1093/nar/gks563},
doi = {10.1093/NAR/GKS563},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ThomasSVAL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ThomsenN12,
author = {Martin Christen Fr{\o}lund Thomsen and
Morten Nielsen},
title = {\emph{Seq2Logo}: a method for construction and visualization of amino
acid binding motifs and sequence profiles including sequence weighting,
pseudo counts and two-sided representation of amino acid enrichment
and depletion},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {281--287},
year = {2012},
url = {https://doi.org/10.1093/nar/gks469},
doi = {10.1093/NAR/GKS469},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ThomsenN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/TrabucoLPR12,
author = {Leonardo G. Trabuco and
Stefano Lise and
Evangelia Petsalaki and
Robert B. Russell},
title = {PepSite: prediction of peptide-binding sites from protein surfaces},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {423--427},
year = {2012},
url = {https://doi.org/10.1093/nar/gks398},
doi = {10.1093/NAR/GKS398},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/TrabucoLPR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/TsengL12,
author = {Yan Yuan Tseng and
Wen{-}Hsiung Li},
title = {{PSC:} protein surface classification},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {435--439},
year = {2012},
url = {https://doi.org/10.1093/nar/gks495},
doi = {10.1093/NAR/GKS495},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/TsengL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/TuncbagMHF12,
author = {Nurcan Tuncbag and
Scott McCallum and
Shao{-}Shan Carol Huang and
Ernest Fraenkel},
title = {SteinerNet: a web server for integrating 'omic' data to discover hidden
components of response pathways},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {505--509},
year = {2012},
url = {https://doi.org/10.1093/nar/gks445},
doi = {10.1093/NAR/GKS445},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/TuncbagMHF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/TusRPTS12,
author = {Alan Tus and
Alen Rakipovic and
Goran Peretin and
Sanja Tomic and
Mile Sikic},
title = {BioMe: biologically relevant metals},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {352--357},
year = {2012},
url = {https://doi.org/10.1093/nar/gks514},
doi = {10.1093/NAR/GKS514},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/TusRPTS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/UllahLC12,
author = {Abu Z. Dayem Ullah and
Nicholas R. Lemoine and
Claude Chelala},
title = {SNPnexus: a web server for functional annotation of novel and publicly
known genetic variants {(2012} update)},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {65--70},
year = {2012},
url = {https://doi.org/10.1093/nar/gks364},
doi = {10.1093/NAR/GKS364},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/UllahLC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/VanegasHDKKZ12,
author = {Pamela L. Vanegas and
Graham A. Hudson and
Amber R. Davis and
Shannon C. Kelly and
Charles C. Kirkpatrick and
Brent M. Znosko},
title = {{RNA} CoSSMos: Characterization of Secondary Structure Motifs - a
searchable database of secondary structure motifs in {RNA} three-dimensional
structures},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {439--444},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr943},
doi = {10.1093/NAR/GKR943},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/VanegasHDKKZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/VelankarABCCDMGGGGHHHHJLMNOPRSSSSSSSVWK12,
author = {Sameer Velankar and
Younes Alhroub and
Christoph Best and
S{\'{e}}gol{\`{e}}ne Caboche and
Matthew J. Conroy and
Jose M. Dana and
Manuel A. Fernandez Montecelo and
Glen van Ginkel and
Adel Golovin and
Swanand P. Gore and
Aleksandras Gutmanas and
Pauline Haslam and
Pieter M. S. Hendrickx and
Egon Heuson and
Miriam Hirshberg and
Melford John and
Ingvar C. Lagerstedt and
Saqib Mir and
Laurence E. Newman and
Thomas J. Oldfield and
Ardan Patwardhan and
Luana Rinaldi and
Gaurav Sahni and
Eduardo Sanz{-}Garc{\'{\i}}a and
Sanchayita Sen and
Robert A. Slowley and
Antonio Suarez{-}Uruena and
G. J. Swaminathan and
Martyn F. Symmons and
Wim F. Vranken and
Michael E. Wainwright and
Gerard J. Kleywegt},
title = {PDBe: Protein Data Bank in Europe},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {445--452},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr998},
doi = {10.1093/NAR/GKR998},
timestamp = {Thu, 09 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/VelankarABCCDMGGGGHHHHJLMNOPRSSSSSSSVWK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/VergoulisVAGMRGKDH12,
author = {Thanasis Vergoulis and
Ioannis S. Vlachos and
Panagiotis Alexiou and
George Georgakilas and
Manolis Maragkakis and
Martin Reczko and
Stefanos Gerangelos and
Nectarios Koziris and
Theodore Dalamagas and
Artemis G. Hatzigeorgiou},
title = {TarBase 6.0: capturing the exponential growth of miRNA targets with
experimental support},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {222--229},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1161},
doi = {10.1093/NAR/GKR1161},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/VergoulisVAGMRGKDH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/VlachosKVGRMPPDH12,
author = {Ioannis S. Vlachos and
Nikos Kostoulas and
Thanasis Vergoulis and
Georgios K. Georgakilas and
Martin Reczko and
Manolis Maragkakis and
Maria D. Paraskevopoulou and
Kostantinos Prionidis and
Theodore Dalamagas and
Artemis G. Hatzigeorgiou},
title = {{DIANA} miRPath v.2.0: investigating the combinatorial effect of microRNAs
in pathways},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {498--504},
year = {2012},
url = {https://doi.org/10.1093/nar/gks494},
doi = {10.1093/NAR/GKS494},
timestamp = {Fri, 07 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/VlachosKVGRMPPDH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/VrolingTMJAPV12,
author = {Bas Vroling and
David Thorne and
Philip McDermott and
Henk{-}Jan Joosten and
Teresa K. Attwood and
Steve Pettifer and
Gert Vriend},
title = {NucleaRDB: information system for nuclear receptors},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {377--380},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr960},
doi = {10.1093/NAR/GKR960},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/VrolingTMJAPV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WangCCL12,
author = {Jui{-}Chih Wang and
Pei{-}Ying Chu and
Chung{-}Ming Chen and
Jung{-}Hsin Lin},
title = {idTarget: a web server for identifying protein targets of small chemical
molecules with robust scoring functions and a divide-and-conquer docking
approach},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {393--399},
year = {2012},
url = {https://doi.org/10.1093/nar/gks496},
doi = {10.1093/NAR/GKS496},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WangCCL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WangDLL12,
author = {Likun Wang and
Yipeng Du and
Ming Lu and
Tingting Li},
title = {{ASEB:} a web server for KAT-specific acetylation site prediction},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {376--379},
year = {2012},
url = {https://doi.org/10.1093/nar/gks437},
doi = {10.1093/NAR/GKS437},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WangDLL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WangSS12,
author = {Shiliang Wang and
Jaideep P. Sundaram and
Timothy B. Stockwell},
title = {{VIGOR} extended to annotate genomes for additional 12 different viruses},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {186--192},
year = {2012},
url = {https://doi.org/10.1093/nar/gks528},
doi = {10.1093/NAR/GKS528},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WangSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WangSWS12,
author = {Xiaowei Wang and
Athanasia Spandidos and
Huajun Wang and
Brian Seed},
title = {PrimerBank: a {PCR} primer database for quantitative gene expression
analysis, 2012 update},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1144--1149},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1013},
doi = {10.1093/NAR/GKR1013},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WangSWS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WangXSZWZHKDSBGB12,
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Zhigang Zhou and
Lianyi Han and
Karen Karapetyan and
Svetlana Dracheva and
Benjamin A. Shoemaker and
Evan Bolton and
Asta Gindulyte and
Stephen H. Bryant},
title = {PubChem's BioAssay Database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {400--412},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1132},
doi = {10.1093/NAR/GKR1132},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/WangXSZWZHKDSBGB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WangZLZC12,
author = {Juan Wang and
Jie Zhang and
Kaibo Li and
Wei Zhao and
Qinghua Cui},
title = {SpliceDisease database: linking {RNA} splicing and disease},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1055--1059},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1171},
doi = {10.1093/NAR/GKR1171},
timestamp = {Mon, 01 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/WangZLZC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WardK12,
author = {Lucas D. Ward and
Manolis Kellis},
title = {HaploReg: a resource for exploring chromatin states, conservation,
and regulatory motif alterations within sets of genetically linked
variants},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {930--934},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr917},
doi = {10.1093/NAR/GKR917},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WardK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WassBS12,
author = {Mark N. Wass and
Geraint Barton and
Michael J. E. Sternberg},
title = {CombFunc: predicting protein function using heterogeneous data sources},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {466--470},
year = {2012},
url = {https://doi.org/10.1093/nar/gks489},
doi = {10.1093/NAR/GKS489},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WassBS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WeatherittJDG12,
author = {Robert J. Weatheritt and
Peter Jehl and
Holger Dinkel and
Toby J. Gibson},
title = {iELM - a web server to explore short linear motif-mediated interactions},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {364--369},
year = {2012},
url = {https://doi.org/10.1093/nar/gks444},
doi = {10.1093/NAR/GKS444},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WeatherittJDG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WeinCDRHV12,
author = {Samuel P. Wein and
Richard G. C{\^{o}}t{\'{e}} and
Marine Dumousseau and
Florian Reisinger and
Henning Hermjakob and
Juan Antonio Vizca{\'{\i}}no},
title = {Improvements in the protein identifier cross-reference service},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {276--280},
year = {2012},
url = {https://doi.org/10.1093/nar/gks338},
doi = {10.1093/NAR/GKS338},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WeinCDRHV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WienerSLN12,
author = {Ayana Wiener and
Marina Shudler and
Anat Levit and
Masha Y. Niv},
title = {BitterDB: a database of bitter compounds},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {413--419},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr755},
doi = {10.1093/NAR/GKR755},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WienerSLN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WijayaFAH12,
author = {Edward Wijaya and
Martin C. Frith and
Kiyoshi Asai and
Paul Horton},
title = {RecountDB: a database of mapped and count corrected transcribed sequences},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1089--1092},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1172},
doi = {10.1093/NAR/GKR1172},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WijayaFAH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WitneyWBTWSWBH12,
author = {Adam A. Witney and
Denise E. Waldron and
Lucy A. Brooks and
Richard H. Tyler and
Michael Withers and
Neil G. Stoker and
Brendan W. Wren and
Philip D. Butcher and
Jason Hinds},
title = {B{\(\mu\)}G@Sbase - a microbial gene expression and comparative genomic
database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {605--609},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr796},
doi = {10.1093/NAR/GKR796},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WitneyWBTWSWBH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WittigKGRSJAWSMKBWRM12,
author = {Ulrike Wittig and
Renate Kania and
Martin Golebiewski and
Maja Rey and
Lei Shi and
Lenneke Jong and
Enkhjargal Algaa and
Andreas Weidemann and
Heidrun Sauer{-}Danzwith and
Saqib Mir and
Olga Krebs and
Meik Bittkowski and
Elina Wetsch and
Isabel Rojas and
Wolfgang M{\"{u}}ller},
title = {{SABIO-RK} - database for biochemical reaction kinetics},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {790--796},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1046},
doi = {10.1093/NAR/GKR1046},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WittigKGRSJAWSMKBWRM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WohlersMAK12,
author = {Inken Wohlers and
No{\"{e}}l Malod{-}Dognin and
Rumen Andonov and
Gunnar W. Klau},
title = {{CSA:} comprehensive comparison of pairwise protein structure alignments},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {303--309},
year = {2012},
url = {https://doi.org/10.1093/nar/gks362},
doi = {10.1093/NAR/GKS362},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WohlersMAK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WongM0E12,
author = {Wing{-}Cheong Wong and
Sebastian Maurer{-}Stroh and
Georg Schneider and
Frank Eisenhaber},
title = {Transmembrane helix: simple or complex},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {370--375},
year = {2012},
url = {https://doi.org/10.1093/nar/gks379},
doi = {10.1093/NAR/GKS379},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WongM0E12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WongPGBGT12,
author = {Aaron K. Wong and
Christopher Y. Park and
Casey S. Greene and
Lars Ailo Bongo and
Yuanfang Guan and
Olga G. Troyanskaya},
title = {{IMP:} a multi-species functional genomics portal for integration,
visualization and prediction of protein functions and networks},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {484--490},
year = {2012},
url = {https://doi.org/10.1093/nar/gks458},
doi = {10.1093/NAR/GKS458},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/WongPGBGT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WoodHMRVSALBKO12,
author = {Valerie Wood and
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Mark D. McDowall and
Kim Rutherford and
Brendan W. Vaughan and
Daniel M. Staines and
Martin Aslett and
Antonia Lock and
J{\"{u}}rg B{\"{a}}hler and
Paul J. Kersey and
Stephen G. Oliver},
title = {PomBase: a comprehensive online resource for fission yeast},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {695--699},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr853},
doi = {10.1093/NAR/GKR853},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WoodHMRVSALBKO12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/WuMCWW12,
author = {Hua{-}Jun Wu and
Ying{-}Ke Ma and
Tong Chen and
Meng Wang and
Xiu{-}Jie Wang},
title = {PsRobot: a web-based plant small {RNA} meta-analysis toolbox},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {22--28},
year = {2012},
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timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/WuMCWW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/X12,
title = {Reorganizing the protein space at the Universal Protein Resource (UniProt)},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {71--75},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr981},
doi = {10.1093/NAR/GKR981},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/X12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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title = {The Gene Ontology: enhancements for 2011},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {559--564},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1028},
doi = {10.1093/NAR/GKR1028},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/X12a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/XiaMSBW12,
author = {Jianguo Xia and
Rupasri Mandal and
Igor Sinelnikov and
David Broadhurst and
David S. Wishart},
title = {MetaboAnalyst 2.0 - a comprehensive server for metabolomic data analysis},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {127--133},
year = {2012},
url = {https://doi.org/10.1093/nar/gks374},
doi = {10.1093/NAR/GKS374},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/XiaMSBW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/XinCOMCGH12,
author = {Yurong Xin and
Benjamin Chanrion and
Anne H. O'Donnell and
Maria Milekic and
Ramiro Costa and
Yongchao Ge and
Fatemeh G. Haghighi},
title = {MethylomeDB: a database of {DNA} methylation profiles of the brain},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1245--1249},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1193},
doi = {10.1093/NAR/GKR1193},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/XinCOMCGH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/XuLHZTW12,
author = {Li{-}Ming Xu and
Jia{-}Rui Li and
Yue Huang and
Min Zhao and
Xing Tang and
Liping Wei},
title = {AutismKB: an evidence-based knowledgebase of autism genetics},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1016--1022},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1145},
doi = {10.1093/NAR/GKR1145},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/XuLHZTW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
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@article{DBLP:journals/nar/YamashitaSSN12,
author = {Riu Yamashita and
Sumio Sugano and
Yutaka Suzuki and
Kenta Nakai},
title = {{DBTSS:} DataBase of Transcriptional Start Sites progress report in
2012},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {150--154},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1005},
doi = {10.1093/NAR/GKR1005},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/YamashitaSSN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/YangKOHLL12,
author = {Joshua SungWoo Yang and
Ji{-}han Kim and
Sangho Oh and
Gukjeong Han and
Sanghyuk Lee and
Jinhyuk Lee},
title = {{STAP} Refinement of the {NMR} database: a database of 2405 refined
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journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {525--530},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1021},
doi = {10.1093/NAR/GKR1021},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/YangKOHLL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/YinMYCMX12,
author = {Yanbin Yin and
Xizeng Mao and
Jincai Yang and
Xin Chen and
Fenglou Mao and
Ying Xu},
title = {dbCAN: a web resource for automated carbohydrate-active enzyme annotation},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {445--451},
year = {2012},
url = {https://doi.org/10.1093/nar/gks479},
doi = {10.1093/NAR/GKS479},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/YinMYCMX12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/YookHBCCCDCDFGGHKKLLMNNOPRRSSSTAWWWHBDKSSS12,
author = {Karen Yook and
Todd W. Harris and
Tamberlyn Bieri and
Abigail Cabunoc and
Juancarlos Chan and
Wen J. Chen and
Paul Davis and
Norie De La Cruz and
Adrian Duong and
Ruihua Fang and
Uma Ganesan and
Christian A. Grove and
Kevin L. Howe and
Snehalata Kadam and
Ranjana Kishore and
Raymond Y. N. Lee and
Yuling Li and
Hans{-}Michael M{\"{u}}ller and
Cecilia Nakamura and
Bill Nash and
Philip Ozersky and
Michael Paulini and
Daniela Raciti and
Arun Rangarajan and
Gary Schindelman and
Xiaoqi Shi and
Erich M. Schwarz and
Mary Ann Tuli and
Kimberly Van Auken and
Daniel Wang and
Xiaodong Wang and
Gary Williams and
Jonathan Hodgkin and
Matthew Berriman and
Richard Durbin and
Paul J. Kersey and
John Spieth and
Lincoln Stein and
Paul W. Sternberg},
title = {WormBase 2012: more genomes, more data, new website},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {735--741},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr954},
doi = {10.1093/NAR/GKR954},
timestamp = {Mon, 08 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/YookHBCCCDCDFGGHKKLLMNNOPRRSSSTAWWWHBDKSSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/YuSRJPKL12,
author = {Namhee Yu and
Jihae Seo and
Kyoohyoung Rho and
Yeongjun Jang and
Jinah Park and
Wan Kyu Kim and
Sanghyuk Lee},
title = {hiPathDB: a human-integrated pathway database with facile visualization},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {797--802},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1127},
doi = {10.1093/NAR/GKR1127},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/YuSRJPKL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ZambelliPPP12,
author = {Federico Zambelli and
Gian Marco Prazzoli and
Graziano Pesole and
Giulio Pavesi},
title = {Cscan: finding common regulators of a set of genes by using a collection
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journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {510--515},
year = {2012},
url = {https://doi.org/10.1093/nar/gks483},
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timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ZambelliPPP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ZhangBCM12,
author = {Zong Hong Zhang and
Kavitha Bharatham and
Sharon M. Q. Chee and
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title = {Cube-DB: detection of functional divergence in human protein families},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {490--494},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1129},
doi = {10.1093/NAR/GKR1129},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ZhangBCM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ZhangCLLGWG12,
author = {Hong{-}Mei Zhang and
Hu Chen and
Wei Liu and
Hui Liu and
Jing Gong and
Huili Wang and
An{-}Yuan Guo},
title = {AnimalTFDB: a comprehensive animal transcription factor database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {144--149},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr965},
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timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/ZhangCLLGWG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ZhangCLZDOW12,
author = {Liuyan Zhang and
Suhua Chang and
Zhao Li and
Kunlin Zhang and
Yang Du and
Jurg Ott and
Jing Wang},
title = {ADHDgene: a genetic database for attention deficit hyperactivity disorder},
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volume = {40},
number = {Database-Issue},
pages = {1003--1009},
year = {2012},
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timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ZhangCLZDOW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ZhangGLHC12,
author = {Huangkai Zhang and
Shenghan Gao and
Martin J. Lercher and
Songnian Hu and
Wei{-}Hua Chen},
title = {EvolView, an online tool for visualizing, annotating and managing
phylogenetic trees},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Web-Server-Issue},
pages = {569--572},
year = {2012},
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doi = {10.1093/NAR/GKS576},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ZhangGLHC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ZhangXWGL12,
author = {Zheng Zhang and
Cheng Xing and
Lushan Wang and
Bin Gong and
Hui Liu},
title = {IndelFR: a database of indels in protein structures and their flanking
regions},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {512--518},
year = {2012},
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doi = {10.1093/NAR/GKR1107},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/ZhangXWGL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ZhaoLCLXLLZ12,
author = {Xin Zhao and
Qi Liu and
Qingqing Cai and
Yanyun Li and
Congjian Xu and
Yixue Li and
Zuofeng Li and
Xiaoyan Zhang},
title = {Dr.VIS: a database of human disease-related viral integration sites},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1041--1046},
year = {2012},
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doi = {10.1093/NAR/GKR1142},
timestamp = {Wed, 18 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/ZhaoLCLXLLZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ZhuSQTLXZSLZHZC12,
author = {Feng Zhu and
Zhe Shi and
Chu Qin and
Lin Tao and
Xin Liu and
Feng Xu and
Li Zhang and
Yang Song and
Xianghui Liu and
Jing{-}Xian Zhang and
Bu{-}Cong Han and
Peng Zhang and
Yuzong Chen},
title = {Therapeutic target database update 2012: a resource for facilitating
target-oriented drug discovery},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {1128--1136},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr797},
doi = {10.1093/NAR/GKR797},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/ZhuSQTLXZSLZHZC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ZiebarthBCC12,
author = {Jesse D. Ziebarth and
Anindya Bhattacharya and
Anlong Chen and
Yan Cui},
title = {PolymiRTS Database 2.0: linking polymorphisms in microRNA target sites
with human diseases and complex traits},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {216--221},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr1026},
doi = {10.1093/NAR/GKR1026},
timestamp = {Mon, 25 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/ZiebarthBCC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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