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@article{DBLP:journals/nar/0002AKBDHB09, author = {Carl F. Schaefer and Kira Anthony and Shiva Krupa and Jeffrey Buchoff and Matthew Day and Timo Hannay and Kenneth H. Buetow}, title = {{PID:} the Pathway Interaction Database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {674--679}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn653}, doi = {10.1093/NAR/GKN653}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/0002AKBDHB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/AbeIOUKKYMI09, author = {Takashi Abe and Toshimichi Ikemura and Yasuo Ohara and Hiroshi Uehara and Makoto Kinouchi and Shigehiko Kanaya and Yuko Yamada and Akira Muto and Hachiro Inokuchi}, title = {tRNADB-CE: tRNA gene database curated manually by experts}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {163--168}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn692}, doi = {10.1093/NAR/GKN692}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/AbeIOUKKYMI09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/AchcarCM09, author = {Fiona Achcar and Jean{-}Michel Camadro and Denis Mestivier}, title = {AutoClass@IJM: a powerful tool for Bayesian classification of heterogeneous data in biology}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {63--67}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp430}, doi = {10.1093/NAR/GKP430}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/AchcarCM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/AckermannCA09, author = {Alejandro A. Ackermann and Santiago J. Carmona and Fern{\'{a}}n Ag{\"{u}}ero}, title = {TcSNP: a database of genetic variation in \emph{Trypanosoma cruzi}}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {544--549}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn874}, doi = {10.1093/NAR/GKN874}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/AckermannCA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/AhmadBGCL09, author = {Yasmeen Ahmad and Fran{\c{c}}ois{-}Michel Boisvert and Peter Gregor and Andy Cobley and Angus I. Lamond}, title = {NOPdb: Nucleolar Proteome Database - 2008 update}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {181--184}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn804}, doi = {10.1093/NAR/GKN804}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/AhmadBGCL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/AhsanSHMTSMAM09, author = {Budrul Ahsan and Taro L. Saito and Shin{-}ichi Hashimoto and Keigo Muramatsu and Manabu Tsuda and Atsushi Sasaki and Kouji Matsushima and Toshiro Aigaki and Shinichi Morishita}, title = {MachiBase: a \emph{Drosophila melanogaster} 5'-end mRNA transcription database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {49--53}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn694}, doi = {10.1093/NAR/GKN694}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/AhsanSHMTSMAM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/AlcantaraCLDPRGVO09, author = {Luiz Carlos J{\'{u}}nior Alc{\^{a}}ntara and Sharon Cassol and Pieter Libin and Koen Deforche and Oliver G. Pybus and Marc Van Ranst and Bernardo Galv{\~{a}}o{-}Castro and Anne{-}Mieke Vandamme and Tulio de Oliveira}, title = {A standardized framework for accurate, high-throughput genotyping of recombinant and non-recombinant viral sequences}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {634--642}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp455}, doi = {10.1093/NAR/GKP455}, timestamp = {Sun, 12 Nov 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/AlcantaraCLDPRGVO09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/AlmeidaSdSMCCCGGJCBKWSOCV09, author = {Luiz Gonzaga Almeida and Noboru J. Sakabe and Alice R. de Oliveira and Maria Cristina C. Silva and Alex S. Mundstein and Tzeela Cohen and Yao{-}Tseng Chen and Ramon Chua and Sita Gurung and Sacha Gnjatic and Achim A. Jungbluth and Otavia L. Caballero and Amos Bairoch and Eva Kiesler and Sarah L. White and Andrew J. G. Simpson and Lloyd J. Old and Anamaria A. Camargo and Ana Tereza Ribeiro de Vasconcelos}, title = {CTdatabase: a knowledge-base of high-throughput and curated data on cancer-testis antigens}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {816--819}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn673}, doi = {10.1093/NAR/GKN673}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/AlmeidaSdSMCCCGGJCBKWSOCV09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/AmbergerBSH09, author = {Joanna S. Amberger and Carol A. Bocchini and Alan F. Scott and Ada Hamosh}, title = {McKusick's Online Mendelian Inheritance in Man (OMIM{\textregistered})}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {793--796}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn665}, doi = {10.1093/NAR/GKN665}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/AmbergerBSH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/AngaranBGG09, author = {Stefano Angaran and Mary Ellen Bock and Claudio Garutti and Concettina Guerra}, title = {MolLoc: a web tool for the local structural alignment of molecular surfaces}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {565--570}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp405}, doi = {10.1093/NAR/GKP405}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/AngaranBGG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/AntonovDWLM09, author = {Alexey V. Antonov and Sabine Dietmann and Philip Wong and Dominik Lutter and Hans{-}Werner Mewes}, title = {GeneSet2miRNA: finding the signature of cooperative miRNA activities in the gene lists}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {323--328}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp313}, doi = {10.1093/NAR/GKP313}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/AntonovDWLM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/AurrecoecheaBBCDFGGGGHHIIKKLMMNPPRRSSTW09, author = {Cristina Aurrecoechea and John Brestelli and Brian P. Brunk and Jane M. Carlton and Jennifer Dommer and Steve Fischer and Bindu Gajria and Xin Gao and Alan R. Gingle and Gregory R. Grant and Omar S. Harb and Mark Heiges and Frank Innamorato and John Iodice and Jessica C. Kissinger and Eileen T. Kraemer and Wei Li and John A. Miller and Hilary G. Morrison and Vishal Nayak and Cary Pennington and Deborah F. Pinney and David S. Roos and Chris Ross and Christian J. Stoeckert Jr. and Steven Sullivan and Charles Treatman and Haiming Wang}, title = {GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens \emph{Giardia lamblia} and \emph{Trichomonas vaginalis}}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {526--530}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn631}, doi = {10.1093/NAR/GKN631}, timestamp = {Thu, 11 Apr 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/AurrecoecheaBBCDFGGGGHHIIKKLMMNPPRRSSTW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/AurrecoecheaBBDFGGGGHHIIKKLMNPPRRSTW09, author = {Cristina Aurrecoechea and John Brestelli and Brian P. Brunk and Jennifer Dommer and Steve Fischer and Bindu Gajria and Xin Gao and Alan R. Gingle and Gregory R. Grant and Omar S. Harb and Mark Heiges and Frank Innamorato and John Iodice and Jessica C. Kissinger and Eileen T. Kraemer and Wei Li and John A. Miller and Vishal Nayak and Cary Pennington and Deborah F. Pinney and David S. Roos and Chris Ross and Christian J. Stoeckert Jr. and Charles Treatman and Haiming Wang}, title = {PlasmoDB: a functional genomic database for malaria parasites}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {539--543}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn814}, doi = {10.1093/NAR/GKN814}, timestamp = {Thu, 11 Apr 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/AurrecoecheaBBDFGGGGHHIIKKLMNPPRRSTW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/AxelrodLNSCHKSFVKL09, author = {Nelson Axelrod and Yuan Lin and Pauline C. Ng and Timothy B. Stockwell and Jonathan Crabtree and Jiaqi Huang and Ewen Kirkness and Robert Strausberg and Marvin Frazier and J. Craig Venter and Saul Kravitz and Samuel Levy}, title = {The HuRef Browser: a web resource for individual human genomics}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {1018--1024}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn939}, doi = {10.1093/NAR/GKN939}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/AxelrodLNSCHKSFVKL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BaileyBBFGCRLN09, author = {Timothy L. Bailey and Mikael Bod{\'{e}}n and Fabian A. Buske and Martin C. Frith and Charles E. Grant and Luca Clementi and Jingyuan Ren and Wilfred W. Li and William Stafford Noble}, title = {{MEME} {SUITE:} tools for motif discovery and searching}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {202--208}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp335}, doi = {10.1093/NAR/GKP335}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BaileyBBFGCRLN09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BarrellDHBOA09, author = {Daniel Barrell and Emily Dimmer and Rachael P. Huntley and David Binns and Claire O'Donovan and Rolf Apweiler}, title = {The {GOA} database in 2009 - an integrated Gene Ontology Annotation resource}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {396--403}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn803}, doi = {10.1093/NAR/GKN803}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BarrellDHBOA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BarrettTWLREKSTMPSME09, author = {Tanya Barrett and Dennis B. Troup and Stephen E. Wilhite and Pierre Ledoux and Dmitry Rudnev and Carlos Evangelista and Irene F. Kim and Alexandra Soboleva and Maxim Tomashevsky and Kimberly A. Marshall and Katherine H. Phillippy and Patti M. Sherman and Rolf N. Muertter and Ron Edgar}, title = {{NCBI} {GEO:} archive for high-throughput functional genomic data}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {885--890}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn764}, doi = {10.1093/NAR/GKN764}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BarrettTWLREKSTMPSME09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BasuKB09, author = {Saumyendra N. Basu and Ravi Kollu and Sharmila Banerjee{-}Basu}, title = {AutDB: a gene reference resource for autism research}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {832--836}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn835}, doi = {10.1093/NAR/GKN835}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BasuKB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BauerGJHTP09, author = {Raphael Andr{\'{e}} Bauer and Stefan G{\"{u}}nther and Dominic Jansen and Carolin Heeger and Paul Florian Thaben and Robert Preissner}, title = {SuperSite: dictionary of metabolite and drug binding sites in proteins}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {195--200}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn618}, doi = {10.1093/NAR/GKN618}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BauerGJHTP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BelshawOMR09, author = {Robert Belshaw and Tulio de Oliveira and Sidney Markowitz and Andrew Rambaut}, title = {The {RNA} Virus Database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {431--435}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn729}, doi = {10.1093/NAR/GKN729}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BelshawOMR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BenkertKS09, author = {Pascal Benkert and Michael K{\"{u}}nzli and Torsten Schwede}, title = {{QMEAN} server for protein model quality estimation}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {510--514}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp322}, doi = {10.1093/NAR/GKP322}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BenkertKS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Benson09, author = {Gary Benson}, title = {\emph{Nucleic Acids Research} annual Web Server Issue in 2009}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {1--2}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp505}, doi = {10.1093/NAR/GKP505}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/Benson09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BensonKLOS09, author = {Dennis A. Benson and Ilene Karsch{-}Mizrachi and David J. Lipman and James Ostell and Eric W. Sayers}, title = {GenBank}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {26--31}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn723}, doi = {10.1093/NAR/GKN723}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/BensonKLOS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BerjanskiiTLCZZBMLLW09, author = {Mark V. Berjanskii and Peter Tang and Jack Liang and Joseph A. Cruz and Jianjun Zhou and You Zhou and Edward Bassett and Cam Macdonell and Paul Lu and Guohui Lin and David S. Wishart}, title = {GeNMR: a web server for rapid NMR-based protein structure determination}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {670--677}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp280}, doi = {10.1093/NAR/GKP280}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BerjanskiiTLCZZBMLLW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BermanWGTSKSAKBKPACMNB09, author = {Helen M. Berman and John D. Westbrook and Margaret J. Gabanyi and Wendy Tao and Raship Shah and Andrei Kouranov and Torsten Schwede and Konstantin Arnold and Florian Kiefer and Lorenza Bordoli and J{\"{u}}rgen Kopp and Michael Podvinec and Paul D. Adams and Lester G. Carter and Wladek Minor and Rajesh Nair and Joshua La Baer}, title = {The protein structure initiative structural genomics knowledgebase}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {365--368}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn790}, doi = {10.1093/NAR/GKN790}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BermanWGTSKSAKBKPACMNB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BernselVHE09, author = {Andreas Bernsel and H{\aa}kan Viklund and Aron Hennerdal and Arne Elofsson}, title = {{TOPCONS:} consensus prediction of membrane protein topology}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {465--468}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp363}, doi = {10.1093/NAR/GKP363}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BernselVHE09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BhasiPMS09, author = {Ashwini Bhasi and Philge Philip and Vinu Manikandan and Periannan Senapathy}, title = {ExDom: an integrated database for comparative analysis of the exon-intron structures of protein domains in eukaryotes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {703--711}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn746}, doi = {10.1093/NAR/GKN746}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BhasiPMS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BlakeBEKR09, author = {Judith A. Blake and Carol J. Bult and Janan T. Eppig and James A. Kadin and Joel E. Richardson}, title = {The Mouse Genome Database genotypes: : phenotypes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {712--719}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn886}, doi = {10.1093/NAR/GKN886}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BlakeBEKR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BlankenburgRBA09, author = {Hagen Blankenburg and Fidel Ram{\'{\i}}rez and Joachim B{\"{u}}ch and Mario Albrecht}, title = {DASMIweb: online integration, analysis and assessment of distributed protein interaction data}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {122--128}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp438}, doi = {10.1093/NAR/GKP438}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BlankenburgRBA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BodeKYLY09, author = {Marcus Bode and Samuel Khor and Hongye Ye and Mo{-}Huang Li and Jackie Y. Ying}, title = {TmPrime: fast, flexible oligonucleotide design software for gene synthesis}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {214--221}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp461}, doi = {10.1093/NAR/GKP461}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BodeKYLY09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BogatyrevaOI09, author = {Natalya S. Bogatyreva and Alexander A. Osypov and Dmitry N. Ivankov}, title = {KineticDB: a database of protein folding kinetics}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {342--346}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn696}, doi = {10.1093/NAR/GKN696}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BogatyrevaOI09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BoutrosSBT09, author = {Robin Boutros and Nicola Stokes and Micha{\"{e}}l Bekaert and Emma C. Teeling}, title = {UniPrime2: a web service providing easier Universal Primer design}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {209--213}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp269}, doi = {10.1093/NAR/GKP269}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BoutrosSBT09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BoyceCR09, author = {Richard D. Boyce and Parmit K. Chilana and Timothy M. Rose}, title = {iCODEHOP: a new interactive program for designing COnsensus-DEgenerate Hybrid Oligonucleotide Primers from multiply aligned protein sequences}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {222--228}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp379}, doi = {10.1093/NAR/GKP379}, timestamp = {Mon, 16 May 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BoyceCR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BrandtH09, author = {Bernd W. Brandt and Jaap Heringa}, title = {webPRC: the Profile Comparer for alignment-based searching of public domain databases}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {48--52}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp279}, doi = {10.1093/NAR/GKP279}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BrandtH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BrazasYO09, author = {Michelle D. Brazas and Joseph Tadashi Yamada and B. F. Francis Ouellette}, title = {Evolution in bioinformatic resources: 2009 update on the Bioinformatics Links Directory}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {3--5}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp531}, doi = {10.1093/NAR/GKP531}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BrazasYO09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BrucknerHKSS09, author = {Sharon Bruckner and Falk H{\"{u}}ffner and Richard M. Karp and Ron Shamir and Roded Sharan}, title = {Torque: topology-free querying of protein interaction networks}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {106--108}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp474}, doi = {10.1093/NAR/GKP474}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/BrucknerHKSS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BruggemanHB09, author = {Jorn Bruggeman and Jaap Heringa and Bernd W. Brandt}, title = {PhyloPars: estimation of missing parameter values using phylogeny}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {179--184}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp370}, doi = {10.1093/NAR/GKP370}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BruggemanHB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BulowESH09, author = {Lorenz B{\"{u}}low and Stefan Engelmann and Martin Schindler and Reinhard Hehl}, title = {AthaMap, integrating transcriptional and post-transcriptional data}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {983--986}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn709}, doi = {10.1093/NAR/GKN709}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BulowESH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CameronSYHD09, author = {R. Andrew Cameron and Manoj Samanta and Autumn Yuan and Dong He and Eric H. Davidson}, title = {SpBase: the sea urchin genome database and web site}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {750--754}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn887}, doi = {10.1093/NAR/GKN887}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CameronSYHD09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CantarelCRBLH09, author = {Brandi L. Cantarel and Pedro M. Coutinho and Corinne Rancurel and Thomas Bernard and Vincent Lombard and Bernard Henrissat}, title = {The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {233--238}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn663}, doi = {10.1093/NAR/GKN663}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CantarelCRBLH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CapriottiM09, author = {Emidio Capriotti and Marc A. Mart{\'{\i}}{-}Renom}, title = {{SARA:} a server for function annotation of {RNA} structures}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {260--265}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp433}, doi = {10.1093/NAR/GKP433}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CapriottiM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CarbajosaTVC09, author = {Guillermo Carbajosa and Almudena Trigo and Alfonso Valencia and Ildefonso Cases}, title = {Bionemo: molecular information on biodegradation metabolism}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {598--602}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn864}, doi = {10.1093/NAR/GKN864}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CarbajosaTVC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Carrillo-TrippSBVLNJBR09, author = {Mauricio Carrillo{-}Tripp and Craig M. Shepherd and Ian A. Borelli and Sangita Venkataraman and Gabriel Lander and Padmaja Natarajan and John E. Johnson and Charles L. Brooks III and Vijay S. Reddy}, title = {VIPERdb\({}^{\mbox{2}}\): an enhanced and web {API} enabled relational database for structural virology}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {436--442}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn840}, doi = {10.1093/NAR/GKN840}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/Carrillo-TrippSBVLNJBR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CerMSL09, author = {Regina Z. Cer and Uma Mudunuri and Robert M. Stephens and Frank J. Lebeda}, title = {\emph{IC}\({}_{\mbox{50}}\)-to-\emph{K}\({}_{\mbox{i}}\): a web-based tool for converting \emph{IC}\({}_{\mbox{50}}\) to \emph{K}\({}_{\mbox{i}}\) values for inhibitors of enzyme activity and ligand binding}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {441--445}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp253}, doi = {10.1093/NAR/GKP253}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CerMSL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ChanL09, author = {Patricia P. Chan and Todd M. Lowe}, title = {GtRNAdb: a database of transfer {RNA} genes detected in genomic sequence}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {93--97}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn787}, doi = {10.1093/NAR/GKN787}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ChanL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ChangCC09, author = {Darby Tien{-}Hao Chang and Ting{-}Ying Chien and Chien{-}Yu Chen}, title = {seeMotif: exploring and visualizing sequence motifs in 3D structures}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {552--558}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp439}, doi = {10.1093/NAR/GKP439}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ChangCC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ChangSGSS09, author = {Antje Chang and Maurice Scheer and Andreas Grote and Ida Schomburg and Dietmar Schomburg}, title = {BRENDA, {AMENDA} and {FRENDA} the enzyme information system: new content and tools in 2009}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {588--592}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn820}, doi = {10.1093/NAR/GKN820}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ChangSGSS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Chatr-aryamontriCPNPSTSCVCC09, author = {Andrew Chatr{-}aryamontri and Arnaud C{\'{e}}ol and Daniele Peluso and Aurelio Nardozza and Simona Panni and Francesca Sacco and Michele Tinti and Alex Smolyar and Luisa Castagnoli and Marc Vidal and Michael E. Cusick and Gianni Cesareni}, title = {VirusMINT: a viral protein interaction database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {669--673}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn739}, doi = {10.1093/NAR/GKN739}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/Chatr-aryamontriCPNPSTSCVCC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ChaurasiaMRSHWF09, author = {Gautam Chaurasia and Soniya Malhotra and Jenny Russ and Sigrid Schnoegl and Christian H{\"{a}}nig and Erich E. Wanker and Matthias E. Futschik}, title = {UniHI 4: new tools for query, analysis and visualization of the human protein-protein interactome}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {657--660}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn841}, doi = {10.1093/NAR/GKN841}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ChaurasiaMRSHWF09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ChenBAJ09, author = {Jing Chen and Eric E. Bardes and Bruce J. Aronow and Anil G. Jegga}, title = {ToppGene Suite for gene list enrichment analysis and candidate gene prioritization}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {305--311}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp427}, doi = {10.1093/NAR/GKP427}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ChenBAJ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ChenBFS09, author = {Doris Chen and J{\"{u}}rg Berger and Michaela Fellner and Takashi Suzuki}, title = {FLYSNPdb: a high-density {SNP} database of \emph{Drosophila melanogaster}}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {567--570}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn583}, doi = {10.1093/NAR/GKN583}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ChenBFS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ChenLLY09, author = {Chun{-}Chen Chen and Chun{-}Yu Lin and Yu{-}Shu Lo and Jinn{-}Moon Yang}, title = {PPISearch: a web server for searching homologous protein-protein interactions across multiple species}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {369--375}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp309}, doi = {10.1093/NAR/GKP309}, timestamp = {Thu, 05 May 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ChenLLY09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ChouCCHH09, author = {Chih{-}Hung Chou and Wen{-}Chi Chang and Chih{-}Min Chiu and Chih{-}Chang Huang and Hsien{-}Da Huang}, title = {{FMM:} a web server for metabolic pathway reconstruction and comparative analysis}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {129--134}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp264}, doi = {10.1093/NAR/GKP264}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ChouCCHH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ChuHHCHO09, author = {Wen{-}Yi Chu and Yu{-}Feng Huang and Chun{-}Chin Huang and Yi{-}Sheng Cheng and Chien{-}Kang Huang and Yen{-}Jen Oyang}, title = {ProteDNA: a sequence-based predictor of sequence-specific DNA-binding residues in transcription factors}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {396--401}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp449}, doi = {10.1093/NAR/GKP449}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ChuHHCHO09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CochraneABBDFGHHHJJLLLLLMMPRRSHVZB09, author = {Guy Cochrane and Ruth Akhtar and James K. Bonfield and Lawrence Bower and Fehmi Demiralp and Nadeem Faruque and Richard Gibson and Gemma Hoad and Tim J. P. Hubbard and Christopher I. Hunter and Mikyung Jang and Szilveszter Juhos and Rasko Leinonen and Steven Leonard and Quan Lin and Rodrigo Lopez and Dariusz Lorenc and Hamish McWilliam and Gaurab Mukherjee and Sheila Plaister and Rajesh Radhakrishnan and Stephen Robinson and Siamak Sobhany and Petra ten Hoopen and Robert Vaughan and Vadim Zalunin and Ewan Birney}, title = {Petabyte-scale innovations at the European Nucleotide Archive}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {19--25}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn765}, doi = {10.1093/NAR/GKN765}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CochraneABBDFGHHHJJLLLLLMMPRRSHVZB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ColeWCFCFKMMGT09, author = {James R. Cole and Qiong Wang and E. Cardenas and Jordan A. Fish and Benli Chai and Ryan J. Farris and A. S. Kulam{-}Syed{-}Mohideen and Donna M. McGarrell and Terry L. Marsh and George M. Garrity and James M. Tiedje}, title = {The Ribosomal Database Project: improved alignments and new tools for rRNA analysis}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {141--145}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn879}, doi = {10.1093/NAR/GKN879}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ColeWCFCFKMMGT09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Consortium09, title = {The Universal Protein Resource (UniProt) 2009}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {169--174}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn664}, doi = {10.1093/NAR/GKN664}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/Consortium09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Contreras-MoreiraSFV09, author = {Bruno Contreras{-}Moreira and Bernardo Sachman{-}Ruiz and Ira{\'{\i}}s Figueroa{-}Palacios and Pablo Vinuesa}, title = {primers4clades: a web server that uses phylogenetic trees to design lineage-specific {PCR} primers for metagenomic and diversity studies}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {95--100}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp377}, doi = {10.1093/NAR/GKP377}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/Contreras-MoreiraSFV09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CotterillK09, author = {Sue Cotterill and Stephen E. Kearsey}, title = {DNAReplication: a database of information and resources for the eukaryotic {DNA} replication community}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {837--839}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn726}, doi = {10.1093/NAR/GKN726}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CotterillK09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CroningMMAG09, author = {Michael D. R. Croning and Michael C. Marshall and Peter McLaren and J. Douglas Armstrong and Seth G. N. Grant}, title = {G2Cdb: the Genes to Cognition database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {846--851}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn700}, doi = {10.1093/NAR/GKN700}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CroningMMAG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CuffSLRGTO09, author = {Alison L. Cuff and Ian Sillitoe and Tony E. Lewis and Oliver Redfern and Richard Garratt and Janet M. Thornton and Christine A. Orengo}, title = {The {CATH} classification revisited - architectures reviewed and new ways to characterize structural divergence in superfamilies}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {310--314}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn877}, doi = {10.1093/NAR/GKN877}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CuffSLRGTO09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CzarCP09, author = {Michael J. Czar and Yizhi Cai and Jean Peccoud}, title = {Writing {DNA} with GenoCAD\({}^{\mbox{TM}}\)}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {40--47}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp361}, doi = {10.1093/NAR/GKP361}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CzarCP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/CzerwoniecDPKKBGR09, author = {Anna Czerwoniec and Stanislaw Dunin{-}Horkawicz and Elzbieta Purta and Katarzyna H. Kaminska and Joanna M. Kasprzak and Janusz M. Bujnicki and Henri Grosjean and Kristian Rother}, title = {{MODOMICS:} a database of {RNA} modification pathways, update 2008}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {118--121}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn710}, doi = {10.1093/NAR/GKN710}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/CzerwoniecDPKKBGR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DattaMSNS09, author = {Ruchira S. Datta and Christopher Meacham and Bushra Samad and Christoph Neyer and Kimmen Sj{\"{o}}lander}, title = {Berkeley {PHOG:} PhyloFacts orthology group prediction web server}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {84--89}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp373}, doi = {10.1093/NAR/GKP373}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/DattaMSNS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DavisMSRWM09, author = {Allan Peter Davis and Cynthia G. Murphy and Cynthia A. Saraceni{-}Richards and Michael C. Rosenstein and Thomas C. Wiegers and Carolyn J. Mattingly}, title = {Comparative Toxicogenomics Database: a knowledgebase and discovery tool for chemical-gene-disease networks}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {786--792}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn580}, doi = {10.1093/NAR/GKN580}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/DavisMSRWM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DebretMC09, author = {Ga{\"{e}}lle Debret and Arnaud Martel and Philippe Cuniasse}, title = {{RASMOT-3D} {PRO:} a 3D motif search webserver}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {459--464}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp304}, doi = {10.1093/NAR/GKP304}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/DebretMC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DijkB09, author = {Marc van Dijk and Alexandre M. J. J. Bonvin}, title = {3D-DART: a {DNA} structure modelling server}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {235--239}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp287}, doi = {10.1093/NAR/GKP287}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/DijkB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DingLKLT09, author = {Guohui Ding and Peter Lorenz and Michael Kreutzer and Yixue Li and Hans{-}J{\"{u}}rgen Thiesen}, title = {SysZNF: the {C2H2} zinc finger gene database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {267--273}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn782}, doi = {10.1093/NAR/GKN782}, timestamp = {Wed, 13 Jan 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/DingLKLT09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DingerPMCGM09, author = {Marcel E. Dinger and Ken C. Pang and Tim R. Mercer and Mark L. Crowe and Sean M. Grimmond and John S. Mattick}, title = {{NRED:} a database of long noncoding {RNA} expression}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {122--126}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn617}, doi = {10.1093/NAR/GKN617}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/DingerPMCGM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DonaldS09, author = {Jason E. Donald and Eugene I. Shakhnovich}, title = {{SDR:} a database of predicted specificity-determining residues in proteins}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {191--194}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn716}, doi = {10.1093/NAR/GKN716}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/DonaldS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DriscollDMS09, author = {Tim Driscoll and Matthew D. Dyer and T. M. Murali and Bruno W. S. Sobral}, title = {{PIG} - the pathogen interaction gateway}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {647--650}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn799}, doi = {10.1093/NAR/GKN799}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/DriscollDMS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DrocPFL09, author = {Ga{\"{e}}tan Droc and Christophe P{\'{e}}rin and S{\'{e}}bastien Fromentin and Pierre Larmande}, title = {OryGenesDB 2008 update: database interoperability for functional genomics of rice}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {992--995}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn821}, doi = {10.1093/NAR/GKN821}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/DrocPFL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DuLCYW09, author = {Zhidian Du and Lin Li and Chin{-}Fu Chen and Philip S. Yu and James Z. Wang}, title = {{G-SESAME:} web tools for GO-term-based gene similarity analysis and knowledge discovery}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {345--349}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp463}, doi = {10.1093/NAR/GKP463}, timestamp = {Wed, 19 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/DuLCYW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DunkelSSBGHJEPEKP09, author = {Mathias Dunkel and Ulrike Schmidt and Swantje Struck and Lena Berger and Bj{\"{o}}rn A. Gr{\"{u}}ning and Julia Hossbach and Ines S. Jaeger and Uta Effmert and Birgit Piechulla and Roger Eriksson and Jette Knudsen and Robert Preissner}, title = {SuperScent - a database of flavors and scents}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {291--294}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn695}, doi = {10.1093/NAR/GKN695}, timestamp = {Fri, 09 Apr 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/DunkelSSBGHJEPEKP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DuranACWIBE09, author = {Chris Duran and Nikki Appleby and Terry Clark and David Wood and Michael Imelfort and Jacqueline Batley and David Edwards}, title = {\emph{AutoSNPdb}: an annotated single nucleotide polymorphism database for crop plants}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {951--953}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn650}, doi = {10.1093/NAR/GKN650}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/DuranACWIBE09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DwinellWSBDLLNPSSTJT09, author = {Melinda R. Dwinell and Elizabeth A. Worthey and Mary Shimoyama and Burcu Bakir{-}Gungor and Jeffrey DePons and Stanley J. F. Laulederkind and Timothy Lowry and Rajni Nigam and Victoria Petri and Jennifer R. Smith and Alexander Stoddard and Simon N. Twigger and Howard J. Jacob}, title = {The Rat Genome Database 2009: variation, ontologies and pathways}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {744--749}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn842}, doi = {10.1093/NAR/GKN842}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/DwinellWSBDLLNPSSTJT09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ElhaiTMMTCSS09, author = {Jeff Elhai and Arnaud Taton and J. P. Massar and John K. Myers and Michael Travers and Johnny Casey and Mark Slupesky and Jeff Shrager}, title = {BioBIKE: {A} Web-based, programmable, integrated biological knowledge base}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {28--32}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp354}, doi = {10.1093/NAR/GKP354}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ElhaiTMMTCSS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ErramiSLGG09, author = {Mounir Errami and Zhaohui Sun and Tara C. Long and Angela C. George and Harold R. Garner}, title = {D{\'{e}}j{\`{a}} vu: a database of highly similar citations in the scientific literature}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {921--924}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn546}, doi = {10.1093/NAR/GKN546}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ErramiSLGG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/EverettVH09, author = {Logan Everett and Antony Vo and Sridhar Hannenhalli}, title = {PTM-Switchboard - a database of posttranslational modifications of transcription factors, the mediating enzymes and target genes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {66--71}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn731}, doi = {10.1093/NAR/GKN731}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/EverettVH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/FeyGCZJBMBSKC09, author = {Petra Fey and Pascale Gaudet and Tomaz Curk and Blaz Zupan and Eric M. Just and Siddhartha Basu and Sohel N. Merchant and Yulia A. Bushmanova and Gad Shaulsky and Warren A. Kibbe and Rex L. Chisholm}, title = {dictyBase - a \emph{Dictyostelium} bioinformatics resource update}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {515--519}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn844}, doi = {10.1093/NAR/GKN844}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/FeyGCZJBMBSKC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/FontaineBSHMA09, author = {Jean{-}Fred Fontaine and Adriano Barbosa{-}Silva and Martin H. Schaefer and Matthew R. Huska and Enrique M. Muro and Miguel A. Andrade{-}Navarro}, title = {MedlineRanker: flexible ranking of biomedical literature}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {141--146}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp353}, doi = {10.1093/NAR/GKP353}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/FontaineBSHMA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/FriedelNSW09, author = {Maik Friedel and Swetlana Nikolajewa and J{\"{u}}rgen S{\"{u}}hnel and Thomas Wilhelm}, title = {DiProDB: a database for dinucleotide properties}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {37--40}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn597}, doi = {10.1093/NAR/GKN597}, timestamp = {Tue, 01 Dec 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/FriedelNSW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/FrischKHF09, author = {Matthias Frisch and Bernward Klocke and Manuela Haltmeier and Kornelie Frech}, title = {LitInspector: literature and signal transduction pathway mining in PubMed abstracts}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {135--140}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp303}, doi = {10.1093/NAR/GKP303}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/FrischKHF09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/FuSKMPP09, author = {William Fu and Brigitte E. Sanders{-}Beer and Kenneth S. Katz and Donna R. Maglott and Kim D. Pruitt and Roger G. Ptak}, title = {Human immunodeficiency virus type 1, human protein interaction database at {NCBI}}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {417--422}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn708}, doi = {10.1093/NAR/GKN708}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/FuSKMPP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/FuSMTJDMV09, author = {Fengli Fu and Jeffry D. Sander and Morgan L. Maeder and Stacey Thibodeau{-}Beganny and J. Keith Joung and Drena Dobbs and Leslie L. Miller and Daniel F. Voytas}, title = {Zinc Finger Database (ZiFDB): a repository for information on {C2H2} zinc fingers and engineered zinc-finger arrays}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {279--283}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn606}, doi = {10.1093/NAR/GKN606}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/FuSMTJDMV09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/FukuchiHSSTGN09, author = {Satoshi Fukuchi and Keiichi Homma and Shigetaka Sakamoto and Hideaki Sugawara and Yoshio Tateno and Takashi Gojobori and Ken Nishikawa}, title = {The {GTOP} database in 2009: updated content and novel features to expand and deepen insights into protein structures and functions}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {333--337}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn855}, doi = {10.1093/NAR/GKN855}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/FukuchiHSSTGN09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/GalperinC09, author = {Michael Y. Galperin and Guy Cochrane}, title = {\emph{Nucleic Acids Research} annual Database Issue and the {NAR} online Molecular Biology Database Collection in 2009}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {1--4}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn942}, doi = {10.1093/NAR/GKN942}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/GalperinC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/GaoATX09, author = {Jianjiong Gao and Ganesh Kumar Agrawal and Jay J. Thelen and Dong Xu}, title = {P\({}^{\mbox{3}}\)DB: a plant protein phosphorylation database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {960--962}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn733}, doi = {10.1093/NAR/GKN733}, timestamp = {Wed, 22 Feb 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/GaoATX09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/GardnerDTNKLWFGEB09, author = {Paul P. Gardner and Jennifer Daub and John G. Tate and Eric P. Nawrocki and Diana L. Kolbe and Stinus Lindgreen and Adam C. Wilkinson and Robert D. Finn and Sam Griffiths{-}Jones and Sean R. Eddy and Alex Bateman}, title = {Rfam: updates to the {RNA} families database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {136--140}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn766}, doi = {10.1093/NAR/GKN766}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/GardnerDTNKLWFGEB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/GattikerDSXPR09, author = {Alexandre Gattiker and Christophe Dessimoz and Adrian Schneider and Ioannis Xenarios and Marco Pagni and Jacques Rougemont}, title = {The Microbe browser for comparative genomics}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {296--299}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp268}, doi = {10.1093/NAR/GKP268}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/GattikerDSXPR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/GerlachKRVZ09, author = {Daniel Gerlach and Evgenia V. Kriventseva and Nazim Rahman and Charles E. Vejnar and Evgeni M. Zdobnov}, title = {miROrtho: computational survey of microRNA genes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {111--117}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn707}, doi = {10.1093/NAR/GKN707}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/GerlachKRVZ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/GilsenanABGADB09, author = {Jane E. Mabey Gilsenan and Graham Atherton and Jennifer Bartholomew and Peter F. Giles and Teresa K. Attwood and David W. Denning and Paul Bowyer}, title = {Aspergillus Genomes and the Aspergillus Cloud}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {509--514}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn876}, doi = {10.1093/NAR/GKN876}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/GilsenanABGADB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Glez-PenaGPF09, author = {Daniel Glez{-}Pe{\~{n}}a and Gonzalo G{\'{o}}mez{-}L{\'{o}}pez and David G. Pisano and Florentino Fdez{-}Riverola}, title = {WhichGenes: a web-based tool for gathering, building, storing and exporting gene sets with application in gene set enrichment analysis}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {329--334}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp263}, doi = {10.1093/NAR/GKP263}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/Glez-PenaGPF09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/GnadOBM09, author = {Florian Gnad and Mario Oroshi and Ewan Birney and Matthias Mann}, title = {{MAPU} 2.0: high-accuracy proteomes mapped to genomes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {902--906}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn773}, doi = {10.1093/NAR/GKN773}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/GnadOBM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/GoffardFW09, author = {Nicolas Goffard and Tancred Frickey and Georg Weiller}, title = {PathExpress update: the enzyme neighbourhood method of associating gene-expression data with metabolic pathways}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {335--339}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp432}, doi = {10.1093/NAR/GKP432}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/GoffardFW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/GoldenbergENB09, author = {Ofir Goldenberg and Elana Erez and Guy Nimrod and Nir Ben{-}Tal}, title = {The ConSurf-DB: pre-calculated evolutionary conservation profiles of protein structures}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {323--327}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn822}, doi = {10.1093/NAR/GKN822}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/GoldenbergENB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/GromihaYSTSF09, author = {M. Michael Gromiha and Yukimitsu Yabuki and M. Xavier Suresh and A. Mary Thangakani and Makiko Suwa and Kazuhiko Fukui}, title = {TMFunction: database for functional residues in membrane proteins}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {201--204}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn672}, doi = {10.1093/NAR/GKN672}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/GromihaYSTSF09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/GroteKRHBBBYJM09, author = {Andreas Grote and Johannes Klein and Ida Retter and Isam Haddad and Susanne Behling and Boyke Bunk and Ilona Biegler and Svitlana Yarmolinetz and Dieter Jahn and Richard M{\"{u}}nch}, title = {{PRODORIC} (release 2009): a database and tool platform for the analysis of gene regulation in prokaryotes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {61--65}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn837}, doi = {10.1093/NAR/GKN837}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/GroteKRHBBBYJM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/GrubbMBB09, author = {Stephen C. Grubb and Terry P. Maddatu and Carol J. Bult and Molly A. Bogue}, title = {Mouse Phenome Database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {720--730}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn778}, doi = {10.1093/NAR/GKN778}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/GrubbMBB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/GuntherEMP09, author = {Stefan G{\"{u}}nther and Joachim von Eichborn and Patrick May and Robert Preissner}, title = {{JAIL:} a structure-based interface library for macromolecules}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {338--341}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn599}, doi = {10.1093/NAR/GKN599}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/GuntherEMP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/GuoWMZKZ09, author = {An{-}Yuan Guo and Bradley Todd Webb and Michael F. Miles and Mark P. Zimmerman and Kenneth S. Kendler and Zhongming Zhao}, title = {{ERGR:} An ethanol-related gene resource}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {840--845}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn816}, doi = {10.1093/NAR/GKN816}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/GuoWMZKZ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HackenbergSLFA09, author = {Michael Hackenberg and Martin Sturm and David Langenberger and Juan Manuel Falc{\'{o}}n{-}P{\'{e}}rez and Ana M. Aransay}, title = {miRanalyzer: a microRNA detection and analysis tool for next-generation sequencing experiments}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {68--76}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp347}, doi = {10.1093/NAR/GKP347}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HackenbergSLFA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HaiderBSZRK09, author = {Syed Haider and Beno{\^{\i}}t Ballester and Damian Smedley and Junjun Zhang and Peter M. Rice and Arek Kasprzyk}, title = {BioMart Central Portal - unified access to biological data}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {23--27}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp265}, doi = {10.1093/NAR/GKP265}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HaiderBSZRK09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HammamiHVF09, author = {Riadh Hammami and Jeannette Ben Hamida and G{\'{e}}rard Vergoten and Ismail Fliss}, title = {PhytAMP: a database dedicated to antimicrobial plant peptides}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {963--968}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn655}, doi = {10.1093/NAR/GKN655}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HammamiHVF09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HarmarHRJBDGHSBCDDDFGLNOOPPRSWS09, author = {Anthony J. Harmar and Rebecca A. Hills and Edward M. Rosser and Martin Jones and Oscar Peter Buneman and Donald R. Dunbar and Stuart D. Greenhill and Valerie A. Hale and Joanna L. Sharman and Tom I. Bonner and William A. Catterall and Anthony P. Davenport and Philippe Delagrange and Colin T. Dollery and Steven M. Foord and George A. Gutman and Vincent Laudet and Richard R. Neubig and Eliot H. Ohlstein and Richard W. Olsen and John A. Peters and Jean{-}Philippe Pin and Robert R. Ruffolo and David B. Searls and Mathew W. Wright and Michael Spedding}, title = {{IUPHAR-DB:} the {IUPHAR} database of {G} protein-coupled receptors and ion channels}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {680--685}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn728}, doi = {10.1093/NAR/GKN728}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HarmarHRJBDGHSBCDDDFGLNOOPPRSWS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HausserBRJWZ09, author = {Jean Hausser and Philipp Berninger and Christoph Rodak and Yvonne Jantscher and Stefan Wirth and Mihaela Zavolan}, title = {MirZ: an integrated microRNA expression atlas and target prediction resource}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {266--272}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp412}, doi = {10.1093/NAR/GKP412}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HausserBRJWZ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HernandezGS09, author = {Marylens Hernandez and Dario Ghersi and Roberto Sanchez}, title = {SITEHOUND-web: a server for ligand binding site identification in protein structures}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {413--416}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp281}, doi = {10.1093/NAR/GKP281}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HernandezGS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HigurashiIK09, author = {Miho Higurashi and Takashi Ishida and Kengo Kinoshita}, title = {PiSite: a database of protein interaction sites using multiple binding states in the {PDB}}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {360--364}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn659}, doi = {10.1093/NAR/GKN659}, timestamp = {Mon, 21 Mar 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/HigurashiIK09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HildebrandGBGIMP09, author = {Peter Werner Hildebrand and Andrean Goede and Raphael A. Bauer and Bj{\"{o}}rn A. Gr{\"{u}}ning and Jochen Ismer and Elke Michalsky and Robert Preissner}, title = {SuperLooper - a prediction server for the modeling of loops in globular and membrane proteins}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {571--574}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp338}, doi = {10.1093/NAR/GKP338}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HildebrandGBGIMP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HoffLMT09, author = {Katharina Jasmin Hoff and Thomas Lingner and Peter Meinicke and Maike Tech}, title = {Orphelia: predicting genes in metagenomic sequencing reads}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {101--105}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp327}, doi = {10.1093/NAR/GKP327}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HoffLMT09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HuHWCHHD09, author = {Zhenjun Hu and Jui{-}Hung Hung and Yan Wang and Yi{-}Chien Chang and Chia{-}Ling Huang and Matt Huyck and Charles DeLisi}, title = {VisANT 3.5: multi-scale network visualization, analysis and inference based on the gene ontology}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {115--121}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp406}, doi = {10.1093/NAR/GKP406}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HuHWCHHD09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HuangCCTHYJH09, author = {Hsi{-}Yuan Huang and Heng{-}Yi Chang and Chih{-}Hung Chou and Ching{-}Ping Tseng and Shinn{-}Ying Ho and Chi{-}Dung Yang and Yih{-}Wei Ju and Hsien{-}Da Huang}, title = {sRNAMap: genomic maps for small non-coding RNAs, their regulators and their targets in microbial genomes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {150--154}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn852}, doi = {10.1093/NAR/GKN852}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HuangCCTHYJH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HubbardAA09, author = {Tim J. P. Hubbard and Bronwen L. Aken and Sarah C. Ayling and Beno{\^{\i}}t Ballester and Kathryn Beal and Eugene Bragin and Simon Brent and Yuan Chen and Peter Clapham and Laura Clarke and Guy Coates and Susan Fairley and Stephen Fitzgerald and Julio Fernandez{-}Banet and Leo Gordon and Stefan Gr{\"{a}}f and Syed Haider and Martin Hammond and Richard C. G. Holland and Kevin L. Howe and Andrew M. Jenkinson and Nathan Johnson and Andreas K{\"{a}}h{\"{a}}ri and Damian Keefe and Stephen Keenan and Rhoda Kinsella and Felix Kokocinski and Eugene Kulesha and Daniel Lawson and Ian Longden and Karine Megy and Patrick Meidl and Bert Overduin and Anne Parker and Bethan Pritchard and Daniel Rios and Michael Schuster and Guy Slater and Damian Smedley and William Spooner and Giulietta Spudich and Stephen J. Trevanion and Albert J. Vilella and Jan Vogel and Simon White and Steven P. Wilder and Arek Zadissa and Ewan Birney and Fiona Cunningham and Val Curwen and Richard Durbin and Xos{\'{e}} M. Fern{\'{a}}ndez{-}Su{\'{a}}rez and Javier Herrero and Arek Kasprzyk and Glenn Proctor and James A. Smith and Stephen M. J. Searle and Paul Flicek}, title = {Ensembl 2009}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {690--697}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn828}, doi = {10.1093/NAR/GKN828}, timestamp = {Wed, 07 Dec 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/HubbardAA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HubbleDJMNRWZSB09, author = {Jeremy Hubble and Janos Demeter and Heng Jin and Maria Mao and Michael Nitzberg and T. B. K. Reddy and Farrell Wymore and Zachariah K. Zachariah and Gavin Sherlock and Catherine A. Ball}, title = {Implementation of GenePattern within the Stanford Microarray Database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {898--901}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn786}, doi = {10.1093/NAR/GKN786}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HubbleDJMNRWZSB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HulsenGVA09, author = {Tim Hulsen and Peter M. A. Groenen and Jacob de Vlieg and Wynand Alkema}, title = {PhyloPat: an updated version of the phylogenetic pattern database contains gene neighborhood}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {731--737}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn645}, doi = {10.1093/NAR/GKN645}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HulsenGVA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/HunterAABBBBDDDFGHHKKLLLLMMMMMMMNOQSSTTVWWY09, author = {Sarah Hunter and Rolf Apweiler and Teresa K. Attwood and Amos Bairoch and Alex Bateman and David Binns and Peer Bork and Ujjwal Das and Louise C. Daugherty and Lauranne Duquenne and Robert D. Finn and Julian Gough and Daniel H. Haft and Nicolas Hulo and Daniel Kahn and Elizabeth Kelly and Aur{\'{e}}lie Laugraud and Ivica Letunic and David Lonsdale and Rodrigo Lopez and Martin Madera and John Maslen and Craig McAnulla and Jennifer McDowall and Jaina Mistry and Alex L. Mitchell and Nicola J. Mulder and Darren A. Natale and Christine A. Orengo and Antony F. Quinn and Jeremy D. Selengut and Christian J. A. Sigrist and Manjula Thimma and Paul D. Thomas and Franck Valentin and Derek Wilson and Cathy H. Wu and Corin Yeats}, title = {InterPro: the integrative protein signature database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {211--215}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn785}, doi = {10.1093/NAR/GKN785}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/HunterAABBBBDDDFGHHKKLLLLMMMMMMMNOQSSTTVWWY09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/IgarashiHDTGGZBIBRCGSOE09, author = {Yoshinobu Igarashi and Emily Heureux and Kutbuddin S. Doctor and Priti Talwar and Svetlana Gramatikova and Kosi Gramatikoff and Ying Zhang and Michael L. Blinov and Salmaz S. Ibragimova and Sarah E. Boyd and Boris I. Ratnikov and Piotr Cieplak and Adam Godzik and Jeffrey W. Smith and Andrei Osterman and Alexey M. Eroshkin}, title = {{PMAP:} databases for analyzing proteolytic events and pathways}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {611--618}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn683}, doi = {10.1093/NAR/GKN683}, timestamp = {Fri, 21 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/IgarashiHDTGGZBIBRCGSOE09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ImanishiN09, author = {Tadashi Imanishi and Hajime Nakaoka}, title = {Hyperlink Management System and {ID} Converter System: enabling maintenance-free hyperlinks among major biological databases}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {17--22}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp355}, doi = {10.1093/NAR/GKP355}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ImanishiN09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/JacobsCSSBTB09, author = {Grant H. Jacobs and Augustine Chen and Stewart G. Stevens and Peter A. Stockwell and Michael A. Black and Warren Tate and Chris M. Brown}, title = {Transterm: a database to aid the analysis of regulatory sequences in mRNAs}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {72--76}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn763}, doi = {10.1093/NAR/GKN763}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/JacobsCSSBTB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/JensenKSCCMDJRSBM09, author = {Lars Juhl Jensen and Michael Kuhn and Manuel Stark and Samuel Chaffron and Christopher J. Creevey and Jean Muller and Tobias Doerks and Philippe Julien and Alexander Roth and Milan Simonovic and Peer Bork and Christian von Mering}, title = {{STRING} 8 - a global view on proteins and their functional interactions in 630 organisms}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {412--416}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn760}, doi = {10.1093/NAR/GKN760}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/JensenKSCCMDJRSBM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/JiangWHJTZLWL09, author = {Qinghua Jiang and Yadong Wang and Yangyang Hao and Liran Juan and Mingxiang Teng and Xinjun Zhang and Meimei Li and Guohua Wang and Yunlong Liu}, title = {miR2Disease: a manually curated database for microRNA deregulation in human disease}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {98--104}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn714}, doi = {10.1093/NAR/GKN714}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/JiangWHJTZLWL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/JuhlingMHSSP09, author = {Frank J{\"{u}}hling and Mario M{\"{o}}rl and Roland K. Hartmann and Mathias Sprinzl and Peter F. Stadler and Joern P{\"{u}}tz}, title = {tRNAdb 2009: compilation of tRNA sequences and tRNA genes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {159--162}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn772}, doi = {10.1093/NAR/GKN772}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/JuhlingMHSSP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KamburovWLH09, author = {Atanas Kamburov and Christoph K. Wierling and Hans Lehrach and Ralf Herwig}, title = {ConsensusPathDB - a database for integrating human functional interaction networks}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {623--628}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn698}, doi = {10.1093/NAR/GKN698}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KamburovWLH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KandasamyKGMPSRPRARCPP09, author = {Kumaran Kandasamy and Shivakumar Keerthikumar and Renu Goel and Suresh Mathivanan and Nandini Patankar and Beema Shafreen and Santosh Renuse and Harsh Pawar and Y. L. Ramachandra and Pradip Kumar Acharya and Prathibha Ranganathan and Raghothama Chaerkady and T. S. Keshava Prasad and Akhilesh Pandey}, title = {Human Proteinpedia: a unified discovery resource for proteomics research}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {773--781}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn701}, doi = {10.1093/NAR/GKN701}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KandasamyKGMPSRPRARCPP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KantardjievA09, author = {Alexander A. Kantardjiev and Boris P. Atanasov}, title = {{PHEMTO:} protein pH-dependent electric moment tools}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {422--427}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp336}, doi = {10.1093/NAR/GKP336}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KantardjievA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Karplus09, author = {Kevin Karplus}, title = {SAM-T08, HMM-based protein structure prediction}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {492--497}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp403}, doi = {10.1093/NAR/GKP403}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/Karplus09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KatzBHSWKTMJ09, author = {Lee S. Katz and Chris R. Bolen and Brian H. Harcourt and Susanna Schmink and Xin Wang and Andrey Kislyuk and Robert T. Taylor and Leonard W. Mayer and I King Jordan}, title = {Meningococcus genome informatics platform: a system for analyzing multilocus sequence typing data}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {606--611}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp288}, doi = {10.1093/NAR/GKP288}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KatzBHSWKTMJ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KaurRESMKSCNCB09, author = {Mandeep Kaur and Aleksandar Radovanovic and Magbubah Essack and Ulf Schaefer and Monique Maqungo and Tracey Kibler and Sebastian Schmeier and Alan Christoffels and Kothandaraman Narasimhan and Mahesh Choolani and Vladimir B. Bajic}, title = {Database for exploration of functional context of genes implicated in ovarian cancer}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {820--823}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn593}, doi = {10.1093/NAR/GKN593}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KaurRESMKSCNCB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KeerthikumarRKHRBARSSRBGRBBINKMPOM09, author = {Shivakumar Keerthikumar and Rajesh Raju and Kumaran Kandasamy and Atsushi Hijikata and Subhashri Ramabadran and Lavanya Balakrishnan and Mukhtar Ahmed and Sandhya Rani and Lakshmi Dhevi N. Selvan and Devi S. Somanathan and Somak Ray and Mitali Bhattacharjee and Sashikanth Gollapudi and Y. L. Ramachandra and Sahely Bhadra and Chiranjib Bhattacharyya and Kohsuke Imai and Shigeaki Nonoyama and Hirokazu Kanegane and Toshio Miyawaki and Akhilesh Pandey and Osamu Ohara and S. Sujatha Mohan}, title = {{RAPID:} Resource of Asian Primary Immunodeficiency Diseases}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {863--867}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn682}, doi = {10.1093/NAR/GKN682}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KeerthikumarRKHRBARSSRBGRBBINKMPOM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KeselerBCGGJKNPPPSSK09, author = {Ingrid M. Keseler and C{\'{e}}sar Bonavides{-}Mart{\'{\i}}nez and Julio Collado{-}Vides and Socorro Gama{-}Castro and Robert P. Gunsalus and D. Aaron Johnson and Markus Krummenacker and Laura M. Nolan and Suzanne M. Paley and Ian T. Paulsen and Mart{\'{\i}}n Peralta{-}Gil and Alberto D. Santos{-}Zavaleta and Alexander Glennon Shearer and Peter D. Karp}, title = {EcoCyc: {A} comprehensive view of \emph{Escherichia coli} biology}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {464--470}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn751}, doi = {10.1093/NAR/GKN751}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KeselerBCGGJKNPPPSSK09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KieferAKBS09, author = {Florian Kiefer and Konstantin Arnold and Michael K{\"{u}}nzli and Lorenza Bordoli and Torsten Schwede}, title = {The {SWISS-MODEL} Repository and associated resources}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {387--392}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn750}, doi = {10.1093/NAR/GKN750}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KieferAKBS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KimCG09, author = {Bong{-}Hyun Kim and Hua Cheng and Nick V. Grishin}, title = {HorA web server to infer homology between proteins using sequence and structural similarity}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {532--538}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp328}, doi = {10.1093/NAR/GKP328}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KimCG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KimCHKC09, author = {Dae{-}Soo Kim and Chi{-}Young Cho and Jae{-}Won Huh and Heui{-}Soo Kim and Hwan{-}Gue Cho}, title = {{EVOG:} a database for evolutionary analysis of overlapping genes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {698--702}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn813}, doi = {10.1093/NAR/GKN813}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KimCHKC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KimCLWY09, author = {Changsik Kim and Jiwon Choi and Seong Joon Lee and William J. Welsh and Sukjoon Yoon}, title = {NetCSSP: web application for predicting chameleon sequences and amyloid fibril formation}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {469--473}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp351}, doi = {10.1093/NAR/GKP351}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KimCLWY09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KittichotiratGBS09, author = {Weerayuth Kittichotirat and Michal Guerquin and Roger Eugene Bumgarner and Ram Samudrala}, title = {Protinfo {PPC:} {A} web server for atomic level prediction of protein complexes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {519--525}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp306}, doi = {10.1093/NAR/GKP306}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KittichotiratGBS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KleinMBHRJ09, author = {Johannes Klein and Richard M{\"{u}}nch and Ilona Biegler and Isam Haddad and Ida Retter and Dieter Jahn}, title = {Strepto-DB, a database for comparative genomics of group {A} {(GAS)} and {B} {(GBS)} streptococci, implemented with the novel database platform 'Open Genome Resource' (OGeR)}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {494--498}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn674}, doi = {10.1093/NAR/GKN674}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KleinMBHRJ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KlimkeABCCFKORRSTT09, author = {William Klimke and Richa Agarwala and Azat Badretdin and Slava Chetvernin and Stacy Ciufo and Boris Fedorov and Boris Kiryutin and Kathleen O'Neill and Wolfgang Resch and Sergei Resenchuk and Susan Schafer and Igor Tolstoy and Tatiana A. Tatusova}, title = {The National Center for Biotechnology Information's Protein Clusters Database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {216--223}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn734}, doi = {10.1093/NAR/GKN734}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KlimkeABCCFKORRSTT09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KouaCFSTHD09, author = {Dominique Koua and Lorenzo Cerutti and Laurent Falquet and Christian J. A. Sigrist and Gr{\'{e}}gory Theiler and Nicolas Hulo and Christophe Dunand}, title = {PeroxiBase: a database with new tools for peroxidase family classification}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {261--266}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn680}, doi = {10.1093/NAR/GKN680}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/KouaCFSTHD09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KrallingerPTV09, author = {Martin Krallinger and Carlos Rodr{\'{\i}}guez Penagos and Ashish V. Tendulkar and Alfonso Valencia}, title = {{PLAN2L:} a web tool for integrated text mining and literature-based bioentity relation extraction}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {160--165}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp484}, doi = {10.1093/NAR/GKP484}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KrallingerPTV09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KrushevskayaPRKV09, author = {Darya Krushevskaya and Hedi Peterson and J{\"{u}}ri Reimand and Meelis Kull and Jaak Vilo}, title = {VisHiC - hierarchical functional enrichment analysis of microarray data}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {587--592}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp435}, doi = {10.1093/NAR/GKP435}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KrushevskayaPRKV09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KuhnKZWSRRRPPMHHHGFDDCBHK09, author = {Robert M. Kuhn and Donna Karolchik and Ann S. Zweig and Ting Wang and Kayla E. Smith and Kate R. Rosenbloom and Brooke L. Rhead and Brian J. Raney and Andy Pohl and Michael Pheasant and Laurence R. Meyer and Fan Hsu and Angela S. Hinrichs and Rachel A. Harte and Belinda Giardine and Pauline A. Fujita and Mark Diekhans and Timothy R. Dreszer and Hiram Clawson and Galt P. Barber and David Haussler and W. James Kent}, title = {The {UCSC} Genome Browser Database: update 2009}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {755--761}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn875}, doi = {10.1093/NAR/GKN875}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KuhnKZWSRRRPPMHHHGFDDCBHK09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KumarHSJWZLLJC09, author = {Pankaj Kumar and Bu{-}Cong Han and Z. Shi and Jia Jia and Yupeng Wang and Y. T. Zhang and L. Liang and Q. F. Liu and Zhi Liang Ji and Yu Zong Chen}, title = {Update of {KDBI:} Kinetic Data of Bio-molecular Interaction database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {636--641}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn839}, doi = {10.1093/NAR/GKN839}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KumarHSJWZLLJC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KuzniarLHNPL09, author = {Arnold Kuzniar and Ke Lin and Ying He and Harm Nijveen and S{\'{a}}ndor Pongor and Jack A. M. Leunissen}, title = {ProGMap: an integrated annotation resource for protein orthology}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {428--434}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp462}, doi = {10.1093/NAR/GKP462}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KuzniarLHNPL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/KwonSKS09, author = {Yeondae Kwon and Yasumasa Shigemoto and Yoshikazu Kuwana and Hideaki Sugawara}, title = {Web {API} for biology with a workflow navigation system}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {11--16}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp300}, doi = {10.1093/NAR/GKP300}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/KwonSKS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LaiTLWCL09, author = {Chin{-}En Lai and Ming{-}Yuan Tsai and Yun{-}Chen Liu and Chih{-}Wei Wang and Kun{-}Tze Chen and Chin Lung Lu}, title = {{FASTR3D:} a fast and accurate search tool for similar {RNA} 3D structures}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {287--295}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp330}, doi = {10.1093/NAR/GKP330}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LaiTLWCL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LamKFCCCG09, author = {Hugo Y. K. Lam and Ekta Khurana and Gang Fang and Philip Cayting and Nicholas Carriero and Kei{-}Hoi Cheung and Mark B. Gerstein}, title = {Pseudofam: the pseudogene families database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {738--743}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn758}, doi = {10.1093/NAR/GKN758}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LamKFCCCG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Laskowski09, author = {Roman A. Laskowski}, title = {PDBsum new things}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {355--359}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn860}, doi = {10.1093/NAR/GKN860}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/Laskowski09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LawsonAABBBCCCDHHKLMMMMRSSTBGKLC09, author = {Daniel Lawson and Peter Arensburger and Peter Atkinson and Nora J. Besansky and Robert V. Bruggner and Ryan Butler and Kathryn S. Campbell and George K. Christophides and Scott Christley and Emmanuel Dialynas and Martin Hammond and Catherine A. Hill and Nathan Konopinski and Neil F. Lobo and Robert M. MacCallum and Gregory R. Madey and Karine Megy and Jason Meyer and Seth Redmond and David W. Severson and Eric O. Stinson and Pantelis Topalis and Ewan Birney and William M. Gelbart and Fotis C. Kafatos and Christos Louis and Frank H. Collins}, title = {VectorBase: a data resource for invertebrate vector genomics}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {583--587}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn857}, doi = {10.1093/NAR/GKN857}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LawsonAABBBCCCDHHKLMMMMRSSTBGKLC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LeeBS09, author = {Zarraz May{-}Ping Lee and Carl Bussema III and Thomas M. Schmidt}, title = {\emph{rrn}DB: documenting the number of rRNA and tRNA genes in bacteria and archaea}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {489--493}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn689}, doi = {10.1093/NAR/GKN689}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LeeBS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LeeCB09, author = {Marianne M. Lee and Michael K. Chan and Ralf Bundschuh}, title = {{SIB-BLAST:} a web server for improved delineation of true and false positives in {PSI-BLAST} searches}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {53--56}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp301}, doi = {10.1093/NAR/GKP301}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LeeCB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LeeCCSSVRC09, author = {Tin{-}Lap Lee and Hoi{-}Hung Cheung and Janek Claus and Chandan Sastry and Sumeeta Singh and Loc Vu and Owen M. Rennert and Wai{-}Yee Chan}, title = {GermSAGE: a comprehensive {SAGE} database for transcript discovery on male germ cell development}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {891--897}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn644}, doi = {10.1093/NAR/GKN644}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LeeCCSSVRC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LeeKCLL09, author = {Po{-}Hsien Lee and Kuei{-}Ling Kuo and Pei{-}Ying Chu and Eric Minwei Liu and Jung{-}Hsin Lin}, title = {{SLITHER:} a web server for generating contiguous conformations of substrate molecules entering into deep active sites of proteins or migrating through channels in membrane transporters}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {559--564}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp359}, doi = {10.1093/NAR/GKP359}, timestamp = {Fri, 04 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LeeKCLL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LeeS09, author = {Byungwook Lee and Gwangsik Shin}, title = {CleanEST: a database of cleansed {EST} libraries}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {686--689}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn648}, doi = {10.1093/NAR/GKN648}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LeeS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LefeverVSP09, author = {Steve Lefever and Jo Vandesompele and Frank Speleman and Filip Pattyn}, title = {RTPrimerDB: the portal for real-time {PCR} primers and probes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {942--945}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn777}, doi = {10.1093/NAR/GKN777}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LefeverVSP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LefrancGGJFBWGBLRELD09, author = {Marie{-}Paule Lefranc and V{\'{e}}ronique Giudicelli and Chantal Ginestoux and Joumana Jabado{-}Michaloud and G{\'{e}}raldine Folch and Fatena Bellahcene and Yan Wu and Elodie Gemrot and Xavier Brochet and J{\'{e}}r{\^{o}}me Lane and Laetitia Regnier and Fran{\c{c}}ois Ehrenmann and G{\'{e}}rard Lefranc and Patrice Duroux}, title = {IMGT{\textregistered}, the international ImMunoGeneTics information system{\textregistered}}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {1006--1012}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn838}, doi = {10.1093/NAR/GKN838}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LefrancGGJFBWGBLRELD09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LeonEGVJ09, author = {Eduardo Andr{\'{e}}s Le{\'{o}}n and Iakes Ezkurdia and Beatriz Garc{\'{\i}}a Jim{\'{e}}nez and Alfonso Valencia and David de Juan}, title = {EcID. {A} database for the inference of functional interactions in \emph{E. coli}}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {629--635}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn853}, doi = {10.1093/NAR/GKN853}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LeonEGVJ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LetunicDB09, author = {Ivica Letunic and Tobias Doerks and Peer Bork}, title = {{SMART} 6: recent updates and new developments}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {229--232}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn808}, doi = {10.1093/NAR/GKN808}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LetunicDB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LiLZLWU09, author = {Chuan{-}Yun Li and Qing{-}Rong Liu and Ping{-}Wu Zhang and Xiao{-}Mo Li and Liping Wei and George R. Uhl}, title = {{OKCAM:} an ontology-based, human-centered knowledgebase for cell adhesion molecules}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {251--260}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn568}, doi = {10.1093/NAR/GKN568}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LiLZLWU09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LiMSYWHLLZYWW09, author = {Guoqing Li and Lijia Ma and Chao Song and Zhentao Yang and Xiulan Wang and Hui Huang and Yingrui Li and Ruiqiang Li and Xiuqing Zhang and Huanming Yang and Jian Wang and Jun Wang}, title = {The {YH} database: the first Asian diploid genome database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {1025--1028}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn966}, doi = {10.1093/NAR/GKN966}, timestamp = {Mon, 05 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/LiMSYWHLLZYWW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LiPLLWWLZ09, author = {Su{-}Jun Li and Mao Peng and Hong Li and Boshu Liu and Chuan Wang and Jia{-}Rui Wu and Yi{-}Xue Li and Rong Zeng}, title = {Sys-BodyFluid: a systematical database for human body fluid proteome research}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {907--912}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn849}, doi = {10.1093/NAR/GKN849}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LiPLLWWLZ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LiangLJ09, author = {Chun Liang and Lin Liu and Guoli Ji}, title = {WebGMAP: a web service for mapping and aligning cDNA sequences to genomes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {77--83}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp389}, doi = {10.1093/NAR/GKP389}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LiangLJ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LiaoKTLH09, author = {Yu{-}Chieh Liao and Chin{-}Yu Ko and Ming{-}Hsin Tsai and Min{-}Shi Lee and Chao A. Hsiung}, title = {{ATIVS:} analytical tool for influenza virus surveillance}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {643--646}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp321}, doi = {10.1093/NAR/GKP321}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LiaoKTLH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LimaACKMRBCLBPBB09, author = {Tania Lima and Andrea H. Auchincloss and Elisabeth Coudert and Guillaume Keller and Karine Michoud and Catherine Rivoire and Virginie Bulliard and Edouard De Castro and Corinne Lachaize and Delphine Baratin and Isabelle Phan and Lydie Bougueleret and Amos Bairoch}, title = {{HAMAP:} a database of completely sequenced microbial proteome sets and manually curated microbial protein families in UniProtKB/Swiss-Prot}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {471--478}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn661}, doi = {10.1093/NAR/GKN661}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LimaACKMRBCLBPBB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LiuP09, author = {Bo Liu and Mihai Pop}, title = {{ARDB} - Antibiotic Resistance Genes Database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {443--447}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn656}, doi = {10.1093/NAR/GKN656}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LiuP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LiuWWLZLKGLG09, author = {Xiao{-}Qiao Liu and Jianmin Wu and Jun Wang and Xiao{-}Chuan Liu and Shuqi Zhao and Zhe Li and Lei Kong and Xiaocheng Gu and Jingchu Luo and Ge Gao}, title = {WebLab: a data-centric, knowledge-sharing bioinformatic platform}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {33--39}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp428}, doi = {10.1093/NAR/GKP428}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/LiuWWLZLKGLG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LoLLL09, author = {Wei{-}Cheng Lo and Chi{-}Ching Lee and Che{-}Yu Lee and Ping{-}Chiang Lyu}, title = {{CPDB:} a database of circular permutation in proteins}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {328--332}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn679}, doi = {10.1093/NAR/GKN679}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/LoLLL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LoLLL09a, author = {Wei{-}Cheng Lo and Che{-}Yu Lee and Chi{-}Ching Lee and Ping{-}Chiang Lyu}, title = {\emph{i}SARST: an integrated {SARST} web server for rapid protein structural similarity searches}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {545--551}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp291}, doi = {10.1093/NAR/GKP291}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/LoLLL09a.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/LonquetyLPC09, author = {Mathieu Lonquety and Zo{\'{e}} Lacroix and Nikolaos Papandreou and Jacques Chomilier}, title = {{SPROUTS:} a database for the evaluation of protein stability upon point mutation}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {374--379}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn704}, doi = {10.1093/NAR/GKN704}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/LonquetyLPC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MaheswariMAB09, author = {Uma Maheswari and Thomas Mock and E. Virginia Armbrust and Chris Bowler}, title = {Update of the Diatom {EST} Database: a new tool for digital transcriptomics}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {1001--1005}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn905}, doi = {10.1093/NAR/GKN905}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MaheswariMAB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MaoDCOX09, author = {Fenglou Mao and PhuongAn Dam and Jacky Chou and Victor Olman and Ying Xu}, title = {{DOOR:} a database for prokaryotic operons}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {459--463}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn757}, doi = {10.1093/NAR/GKN757}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MaoDCOX09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MaragkakisRSAPDGGKKVKSTH09, author = {Manolis Maragkakis and Martin Reczko and Victor A. Simossis and Panagiotis Alexiou and Giorgos L. Papadopoulos and Theodore Dalamagas and Giorgos Giannopoulos and Georgios I. Goumas and Evangelos Koukis and Kornilios Kourtis and Thanasis Vergoulis and Nectarios Koziris and Timos K. Sellis and Panayotis Tsanakas and Artemis G. Hatzigeorgiou}, title = {DIANA-microT web server: elucidating microRNA functions through target prediction}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {273--276}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp292}, doi = {10.1093/NAR/GKP292}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MaragkakisRSAPDGGKKVKSTH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Marchler-BauerACDDFGGGGHHJKLLLLLMMSTTYZZB09, author = {Aron Marchler{-}Bauer and John B. Anderson and Farideh Chitsaz and Myra K. Derbyshire and Carol DeWeese{-}Scott and Jessica H. Fong and Lewis Y. Geer and Renata C. Geer and Noreen R. Gonzales and Marc Gwadz and Siqian He and David I. Hurwitz and John D. Jackson and Zhaoxi Ke and Christopher J. Lanczycki and Cynthia A. Liebert and Chunlei Liu and Fu Lu and Shennan Lu and Gabriele H. Marchler and Mikhail Mullokandov and James S. Song and Asba Tasneem and Narmada Thanki and Roxanne A. Yamashita and Dachuan Zhang and Naigong Zhang and Stephen H. Bryant}, title = {{CDD:} specific functional annotation with the Conserved Domain Database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {205--210}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn845}, doi = {10.1093/NAR/GKN845}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/Marchler-BauerACDDFGGGGHHJKLLLLLMMSTTYZZB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MargrafST09, author = {Thomas Margraf and Gundolf Schenk and Andrew E. Torda}, title = {The {SALAMI} protein structure search server}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {480--484}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp431}, doi = {10.1093/NAR/GKP431}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MargrafST09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MartinAWYWM09, author = {John C. Martin and Sahar Abubucker and Todd Wylie and Yong Yin and Zhengyuan Wang and Makedonka Dautova Mitreva}, title = {Nematode.net update 2008: improvements enabling more efficient data mining and comparative nematode genomics}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {571--578}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn744}, doi = {10.1093/NAR/GKN744}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MartinAWYWM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MartinMB09, author = {David M. A. Martin and Diego Miranda{-}Saavedra and Geoffrey J. Barton}, title = {Kinomer v. 1.0: a database of systematically classified eukaryotic protein kinases}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {244--250}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn834}, doi = {10.1093/NAR/GKN834}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MartinMB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MaruyamaWKKYNKSGIN09, author = {Yukio Maruyama and Ai Wakamatsu and Yoshifumi Kawamura and Kouichi Kimura and Jun{-}ichi Yamamoto and Tetsuo Nishikawa and Yasutomo Kisu and Sumio Sugano and Naoki Goshima and Takao Isogai and Nobuo Nomura}, title = {Human Gene and Protein Database {(HGPD):} a novel database presenting a large quantity of experiment-based results in human proteomics}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {762--766}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn872}, doi = {10.1093/NAR/GKN872}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MaruyamaWKKYNKSGIN09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MasciocchiFFSFPPCRM09, author = {Joel Masciocchi and Gianfranco Frau and Marco Fanton and Mattia Sturlese and Matteo Floris and Luca Pireddu and Piergiorgio Palla and Fabian Cedrati and Patricia Rodriguez{-}Tom{\'{e}} and Stefano Moro}, title = {MMsINC: a large-scale chemoinformatics database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {284--290}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn727}, doi = {10.1093/NAR/GKN727}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MasciocchiFFSFPPCRM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MatsushimaKMIKEUMT09, author = {Akihiro Matsushima and Norio Kobayashi and Yoshiki Mochizuki and Manabu Ishii and Shuji Kawaguchi and Takaho A. Endo and Ryo Umetsu and Yuko Makita and Tetsuro Toyoda}, title = {OmicBrowse: a Flash-based high-performance graphics interface for genomic resources}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {57--62}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp404}, doi = {10.1093/NAR/GKP404}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MatsushimaKMIKEUMT09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MatthewsGGCCBGHHJKLMMSVWBSD09, author = {Lisa Matthews and Gopal Gopinath and Marc Gillespie and Michael Caudy and David Croft and Bernard de Bono and Phani V. Garapati and Jill Hemish and Henning Hermjakob and Bijay Jassal and Alexander Kanapin and Suzanna Lewis and Shahana Mahajan and Bruce May and Esther Schmidt and Imre Vastrik and Guanming Wu and Ewan Birney and Lincoln Stein and Peter D'Eustachio}, title = {Reactome knowledgebase of human biological pathways and processes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {619--622}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn863}, doi = {10.1093/NAR/GKN863}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MatthewsGGCCBGHHJKLMMSVWBSD09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MaupetitDT09, author = {Julien Maupetit and Philippe Derreumaux and Pierre Tuff{\'{e}}ry}, title = {{PEP-FOLD:} an online resource for \emph{de novo} peptide structure prediction}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {498--503}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp323}, doi = {10.1093/NAR/GKP323}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/MaupetitDT09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/McDonaldBT09, author = {Andrew G. McDonald and Sin{\'{e}}ad Boyce and Keith F. Tipton}, title = {ExplorEnz: the primary source of the {IUBMB} enzyme list}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {593--597}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn582}, doi = {10.1093/NAR/GKN582}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/McDonaldBT09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/McDowallSB09, author = {Mark D. McDowall and Michelle S. Scott and Geoffrey J. Barton}, title = {PIPs: human protein-protein interaction prediction database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {651--656}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn870}, doi = {10.1093/NAR/GKN870}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/McDowallSB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/McwilliamVGLNMML09, author = {Hamish McWilliam and Franck Valentin and Mickael Goujon and Weizhong Li and Menaka Narayanasamy and Jenny Martin and Teresa Miyar and Rodrigo Lopez}, title = {Web services at the European Bioinformatics Institute-2009}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {6--10}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp302}, doi = {10.1093/NAR/GKP302}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/McwilliamVGLNMML09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MedinaMBPCTAD09, author = {Ignacio Medina and David Montaner and Nuria Bonifaci and Miguel Angel Pujana and Jos{\'{e}} Carbonell and Joaqu{\'{\i}}n T{\'{a}}rraga and F{\'{a}}tima Al{-}Shahrour and Joaqu{\'{\i}}n Dopazo}, title = {Gene set-based analysis of polymorphisms: finding pathways or biological processes associated to traits in genome-wide association studies}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {340--344}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp481}, doi = {10.1093/NAR/GKP481}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MedinaMBPCTAD09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MinguezGMAD09, author = {Pablo Minguez and Stefan G{\"{o}}tz and David Montaner and F{\'{a}}tima Al{-}Shahrour and Joaqu{\'{\i}}n Dopazo}, title = {SNOW, a web-based tool for the statistical analysis of protein-protein interaction networks}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {109--114}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp402}, doi = {10.1093/NAR/GKP402}, timestamp = {Thu, 02 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/MinguezGMAD09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Miranda-SaavedraDTTG09, author = {Diego Miranda{-}Saavedra and Subhajyoti De and Matthew W. B. Trotter and Sarah A. Teichmann and Berthold G{\"{o}}ttgens}, title = {BloodExpress: a database of gene expression in mouse haematopoiesis}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {873--879}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn854}, doi = {10.1093/NAR/GKN854}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/Miranda-SaavedraDTTG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MitsuhashiFTKTO09, author = {Nobutaka Mitsuhashi and Kaori Fujieda and Takuro Tamura and Shoko Kawamoto and Toshihisa Takagi and Kousaku Okubo}, title = {BodyParts3D: 3D structure database for anatomical concepts}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {782--785}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn613}, doi = {10.1093/NAR/GKN613}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MitsuhashiFTKTO09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MituyamaYHOOTYKA09, author = {Toutai Mituyama and Kouichirou Yamada and Emi Hattori and Hiroaki Okida and Yukiteru Ono and Goro Terai and Aya Yoshizawa and Takashi Komori and Kiyoshi Asai}, title = {The Functional {RNA} Database 3.0: databases to support mining and annotation of functional RNAs}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {89--92}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn805}, doi = {10.1093/NAR/GKN805}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MituyamaYHOOTYKA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MooijMP09, author = {Wijnand T. M. Mooij and Eirini Mitsiki and Anastassis Perrakis}, title = {\emph{ProteinCCD}: enabling the design of protein truncation constructs for expression and crystallization experiments}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {402--405}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp256}, doi = {10.1093/NAR/GKP256}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MooijMP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/MorrisseyD09, author = {Edward R. Morrissey and Ram{\'{o}}n D{\'{\i}}az{-}Uriarte}, title = {Pomelo {II:} finding differentially expressed genes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {581--586}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp366}, doi = {10.1093/NAR/GKP366}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/MorrisseyD09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Mower09, author = {Jeffrey P. Mower}, title = {The {PREP} suite: predictive {RNA} editors for plant mitochondrial genes, chloroplast genes and user-defined alignments}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {253--259}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp337}, doi = {10.1093/NAR/GKP337}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/Mower09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/NaamatiAL09, author = {Guy Naamati and Manor Askenazi and Michal Linial}, title = {ClanTox: a classifier of short animal toxins}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {363--368}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp299}, doi = {10.1093/NAR/GKP299}, timestamp = {Sat, 05 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/NaamatiAL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/NakazatoBMT09, author = {Takeru Nakazato and Hidemasa Bono and Hideo Matsuda and Toshihisa Takagi}, title = {Gendoo: Functional profiling of gene and disease features using MeSH vocabulary}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {166--169}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp483}, doi = {10.1093/NAR/GKP483}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/NakazatoBMT09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/NamLCBKN09, author = {Seungyoon Nam and Meng Li and Kwangmin Choi and Curtis Balch and Sun Kim and Kenneth P. Nephew}, title = {MicroRNA and mRNA integrated analysis {(MMIA):} a web tool for examining biological functions of microRNA expression}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {356--362}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp294}, doi = {10.1093/NAR/GKP294}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/NamLCBKN09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/NavratilCMDGALR09, author = {Vincent Navratil and Beno{\^{\i}}t de Chassey and Laur{\`{e}}ne Meyniel and St{\'{e}}phane Delmotte and Christian Gautier and Patrice Andr{\'{e}} and Vincent Lotteau and Chantal Rabourdin{-}Combe}, title = {VirHostNet: a knowledge base for the management and the analysis of proteome-wide virus-host interaction networks}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {661--668}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn794}, doi = {10.1093/NAR/GKN794}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/NavratilCMDGALR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/NewburgerB09, author = {Daniel E. Newburger and Martha L. Bulyk}, title = {UniPROBE: an online database of protein binding microarray data on protein-DNA interactions}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {77--82}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn660}, doi = {10.1093/NAR/GKN660}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/NewburgerB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Nogales-CadenasADCP09, author = {Rub{\'{e}}n Nogales{-}Cadenas and Federico Abascal and Javier D{\'{\i}}ez{-}P{\'{e}}rez and Jos{\'{e}} Mar{\'{\i}}a Carazo and Alberto D. Pascual{-}Montano}, title = {CentrosomeDB: a human centrosomal proteins database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {175--180}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn815}, doi = {10.1093/NAR/GKN815}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/Nogales-CadenasADCP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Nogales-CadenasCVVYTCP09, author = {Rub{\'{e}}n Nogales{-}Cadenas and Pedro Carmona{-}Saez and Miguel V{\'{a}}zquez and Cesar Vicente and Xiaoyuan Yang and Francisco Tirado and Jos{\'{e}} Mar{\'{\i}}a Carazo and Alberto D. Pascual{-}Montano}, title = {GeneCodis: interpreting gene lists through enrichment analysis and integration of diverse biological information}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {317--322}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp416}, doi = {10.1093/NAR/GKP416}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/Nogales-CadenasCVVYTCP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/NovichkovRWKD09, author = {Pavel S. Novichkov and Igor Ratnere and Yuri I. Wolf and Eugene V. Koonin and Inna Dubchak}, title = {{ATGC:} a database of orthologous genes from closely related prokaryotic genomes and a research platform for microevolution of prokaryotes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {448--454}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn684}, doi = {10.1093/NAR/GKN684}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/NovichkovRWKD09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/NoySWDDGJRSCM09, author = {Natalya Fridman Noy and Nigam H. Shah and Patricia L. Whetzel and Benjamin Dai and Michael Dorf and Nicholas Griffith and Cl{\'{e}}ment Jonquet and Daniel L. Rubin and Margaret{-}Anne D. Storey and Christopher G. Chute and Mark A. Musen}, title = {BioPortal: ontologies and integrated data resources at the click of a mouse}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {170--173}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp440}, doi = {10.1093/NAR/GKP440}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/NoySWDDGJRSCM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/OBrienZWMBLB09, author = {Emmet A. O'Brien and Yue Zhang and Eric Wang and Veronique Marie and Wole Badejoko and B. Franz Lang and Gertraud Burger}, title = {{GOBASE:} an organelle genome database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {946--950}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn819}, doi = {10.1093/NAR/GKN819}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/OBrienZWMBLB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ObayashiHSOK09, author = {Takeshi Obayashi and Shinpei Hayashi and Motoshi Saeki and Hiroyuki Ohta and Kengo Kinoshita}, title = {{ATTED-II} provides coexpressed gene networks for Arabidopsis}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {987--991}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn807}, doi = {10.1093/NAR/GKN807}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ObayashiHSOK09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/OoiKWSEMWSES09, author = {Hong Sain Ooi and Chia Yee Kwoh and Michael Wildpaner and Fernanda L. Sirota and Birgit Eisenhaber and Sebastian Maurer{-}Stroh and Wing{-}Cheong Wong and Alexander Schleiffer and Frank Eisenhaber and Georg Schneider}, title = {{ANNIE:} integrated \emph{de novo} protein sequence annotation}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {435--440}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp254}, doi = {10.1093/NAR/GKP254}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/OoiKWSEMWSES09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/PapadopoulosRSSH09, author = {Giorgos L. Papadopoulos and Martin Reczko and Victor A. Simossis and Praveen Sethupathy and Artemis G. Hatzigeorgiou}, title = {The database of experimentally supported targets: a functional update of TarBase}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {155--158}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn809}, doi = {10.1093/NAR/GKN809}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/PapadopoulosRSSH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ParkinsonKKRSABDEFHLMMPRRSWBABBCKKMNRSSZSB09, author = {Helen E. Parkinson and Misha Kapushesky and Nikolay Kolesnikov and Gabriella Rustici and Mohammadreza Shojatalab and Niran Abeygunawardena and Hugo B{\'{e}}rub{\'{e}} and Miroslaw Dylag and Ibrahim Emam and Anna Farne and Ele Holloway and Margus Lukk and James Malone and Roby Mani and Ekaterina Pilicheva and Tim F. Rayner and Faisal Ibne Rezwan and Anjan Sharma and Eleanor Williams and Xiangqun Zheng Bradley and Tomasz Adamusiak and Marco Brandizi and Tony Burdett and Richard Coulson and Maria Krestyaninova and Pavel Kurnosov and Eamonn Maguire and Sudeshna Guha Neogi and Philippe Rocca{-}Serra and Susanna{-}Assunta Sansone and Nataliya Sklyar and Mengyao Zhao and Ugis Sarkans and Alvis Brazma}, title = {ArrayExpress update - from an archive of functional genomics experiments to the atlas of gene expression}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {868--872}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn889}, doi = {10.1093/NAR/GKN889}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ParkinsonKKRSABDEFHLMMPRRSWBABBCKKMNRSSZSB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/PavelkaCD09, author = {Anton{\'{\i}}n Pavelka and Eva Chovancov{\'{a}} and Jir{\'{\i}} Damborsk{\'{y}}}, title = {HotSpot Wizard: a web server for identification of hot spots in protein engineering}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {376--383}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp410}, doi = {10.1093/NAR/GKP410}, timestamp = {Mon, 29 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/PavelkaCD09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/PengZLYLJCBWJLHQWZFSLG09, author = {Zhiyu Peng and Xin Zhou and Linchuan Li and Xiangchun Yu and Hongjiang Li and Zhiqiang Jiang and Guangyu Cao and Mingyi Bai and Xingchun Wang and Caifu Jiang and Haibin Lu and Xianhui Hou and Lijia Qu and Zhiyong Wang and Jianru Zuo and Xiangdong Fu and Zhen Su and Songgang Li and Hongwei Guo}, title = {Arabidopsis Hormone Database: a comprehensive genetic and phenotypic information database for plant hormone research in Arabidopsis}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {975--982}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn873}, doi = {10.1093/NAR/GKN873}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/PengZLYLJCBWJLHQWZFSLG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/PerteaASS09, author = {Mihaela Pertea and Kunmi Ayanbule and Megan Smedinghoff and Steven L. Salzberg}, title = {OperonDB: a comprehensive database of predicted operons in microbial genomes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {479--482}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn784}, doi = {10.1093/NAR/GKN784}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/PerteaASS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/PhillippyAES09, author = {Adam M. Phillippy and Kunmi Ayanbule and Nathan J. Edwards and Steven L. Salzberg}, title = {Insignia: a {DNA} signature search web server for diagnostic assay development}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {229--234}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp286}, doi = {10.1093/NAR/GKP286}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/PhillippyAES09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/PicoSCYWWTCW09, author = {Alexander R. Pico and Ivan V. Smirnov and Jeffrey S. Chang and Ru{-}Fang Yeh and Joseph Wiemels and John K. Wiencke and Tarik Tihan and Bruce R. Conklin and Margaret R. Wrensch}, title = {SNPLogic: an interactive single nucleotide polymorphism selection, annotation, and prioritization system}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {803--809}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn756}, doi = {10.1093/NAR/GKN756}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/PicoSCYWWTCW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/PieperEWEKBCMKMDS09, author = {Ursula Pieper and Narayanan Eswar and Ben M. Webb and David Eramian and Libusha Kelly and David T. Barkan and Hannah Carter and Parminder Mankoo and Rachel Karchin and Marc A. Mart{\'{\i}}{-}Renom and Fred P. Davis and Andrej Sali}, title = {MODBASE, a database of annotated comparative protein structure models and associated resources}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {347--354}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn791}, doi = {10.1093/NAR/GKN791}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/PieperEWEKBCMKMDS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/PisarevPSR09, author = {Andrei Pisarev and Ekaterina Poustelnikova and Maria Samsonova and John Reinitz}, title = {FlyEx, the quantitative atlas on segmentation gene expression at cellular resolution}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {560--566}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn717}, doi = {10.1093/NAR/GKN717}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/PisarevPSR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/PlakeRWHS09, author = {Conrad Plake and Lo{\"{\i}}c Royer and Rainer Winnenburg and J{\"{o}}rg Hakenberg and Michael Schroeder}, title = {GoGene: gene annotation in the fast lane}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {300--304}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp429}, doi = {10.1093/NAR/GKP429}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/PlakeRWHS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/PonsL09, author = {Jean{-}Luc Pons and Gilles Labesse}, title = {@TOME-2: a new pipeline for comparative modeling of protein-ligand complexes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {485--491}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp368}, doi = {10.1093/NAR/GKP368}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/PonsL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Portales-CasamarALSJMKW09, author = {Elodie Portales{-}Casamar and David J. Arenillas and Jonathan S. Lim and Magdalena I. Swanson and Steven Jiang and Anthony McCallum and Stefan Kirov and Wyeth W. Wasserman}, title = {The {PAZAR} database of gene regulatory information coupled to the {ORCA} toolkit for the study of regulatory sequences}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {54--60}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn783}, doi = {10.1093/NAR/GKN783}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/Portales-CasamarALSJMKW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/PrasadGKKKMTRSVBMBSSRRKKAKMRKRMRRCP09, author = {T. S. Keshava Prasad and Renu Goel and Kumaran Kandasamy and Shivakumar Keerthikumar and Sameer Kumar and Suresh Mathivanan and Deepthi Telikicherla and Rajesh Raju and Beema Shafreen and Abhilash Venugopal and Lavanya Balakrishnan and Arivusudar Marimuthu and Sutopa Banerjee and Devi S. Somanathan and Aimy Sebastian and Sandhya Rani and Somak Ray and C. J. Harrys Kishore and Sashi Kanth and Mukhtar Ahmed and Manoj K. Kashyap and Riaz Mohmood and Y. L. Ramachandra and V. Krishna and B. Abdul Rahiman and S. Sujatha Mohan and Prathibha Ranganathan and Subhashri Ramabadran and Raghothama Chaerkady and Akhilesh Pandey}, title = {Human Protein Reference Database - 2009 update}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {767--772}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn892}, doi = {10.1093/NAR/GKN892}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/PrasadGKKKMTRSVBMBSSRRKKAKMRKRMRRCP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/PrazB09, author = {Viviane Praz and Philipp Bucher}, title = {CleanEx: new data extraction and merging tools based on MeSH term annotation}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {880--884}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn878}, doi = {10.1093/NAR/GKN878}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/PrazB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ProuxSMR09, author = {Estelle Proux{-}W{\'{e}}ra and Romain A. Studer and S{\'{e}}bastien Moretti and Marc Robinson{-}Rechavi}, title = {Selectome: a database of positive selection}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {404--407}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn768}, doi = {10.1093/NAR/GKN768}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ProuxSMR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/PruittTKM09, author = {Kim D. Pruitt and Tatiana A. Tatusova and William Klimke and Donna R. Maglott}, title = {{NCBI} Reference Sequences: current status, policy and new initiatives}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {32--36}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn721}, doi = {10.1093/NAR/GKN721}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/PruittTKM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/QuesadaOSPL09, author = {V{\'{\i}}ctor Quesada and Gonzalo R. Ord{\'{o}}{\~{n}}ez and Luis M. S{\'{a}}nchez and Xose S. Puente and Carlos L{\'{o}}pez{-}Ot{\'{\i}}n}, title = {The Degradome database: mammalian proteases and diseases of proteolysis}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {239--243}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn570}, doi = {10.1093/NAR/GKN570}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/QuesadaOSPL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/RajasekaranBGGKKMMRVS09, author = {Sanguthevar Rajasekaran and Sudha Balla and Patrick Gradie and Michael R. Gryk and Krishna Kadaveru and Vamsi Kundeti and Mark W. Maciejewski and Tian Mi and Nicholas Rubino and Jay Vyas and Martin R. Schiller}, title = {Minimotif miner 2nd release: a database and web system for motif search}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {185--190}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn865}, doi = {10.1093/NAR/GKN865}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/RajasekaranBGGKKMMRVS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ReddyRWMDEGHJJKLMNSSWWZSGBS09, author = {T. B. K. Reddy and Robert Riley and Farrell Wymore and Phillip Montgomery and David DeCaprio and Reinhard Engels and Marcel Gellesch and Jeremy Hubble and Dennis Jen and Heng Jin and Michael Koehrsen and Lisa Larson and Maria Mao and Michael Nitzberg and Peter Sisk and Christian Stolte and Brian Weiner and Jared White and Zachariah K. Zachariah and Gavin Sherlock and James E. Galagan and Catherine A. Ball and Gary K. Schoolnik}, title = {{TB} database: an integrated platform for tuberculosis research}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {499--508}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn652}, doi = {10.1093/NAR/GKN652}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/ReddyRWMDEGHJJKLMNSSWWZSGBS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/RemmertLLS09, author = {Michael Remmert and Dirk Linke and Andrei N. Lupas and Johannes S{\"{o}}ding}, title = {HHomp - prediction and classification of outer membrane proteins}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {446--451}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp325}, doi = {10.1093/NAR/GKP325}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/RemmertLLS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/RenGZWXL09, author = {Yongliang Ren and Wuming Gong and Haiyan Zhou and Yejun Wang and Feifei Xiao and Tongbin Li}, title = {siRecords: a database of mammalian RNAi experiments and efficacies}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {146--149}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn817}, doi = {10.1093/NAR/GKN817}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/RenGZWXL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Riano-PachonNNWBWMDK09, author = {Diego Mauricio Ria{\~{n}}o{-}Pach{\'{o}}n and Axel Nagel and Jost Neigenfind and Robert Wagner and Rico Basekow and Elke Weber and Bernd Mueller{-}Roeber and Svenja Diehl and Birgit Kersten}, title = {GabiPD: the {GABI} primary database - a plant integrative 'omics' database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {954--959}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn611}, doi = {10.1093/NAR/GKN611}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/Riano-PachonNNWBWMDK09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/RichardsonGMZPP09, author = {Christopher J. Richardson and Qiong Gao and Costas Mitsopoulos and Marketa Zvelebil and Laurence H. Pearl and Frances M. G. Pearl}, title = {MoKCa database - mutations of kinases in cancer}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {824--831}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn832}, doi = {10.1093/NAR/GKN832}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/RichardsonGMZPP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/RobinsonWFMLPM09, author = {James Robinson and Matthew J. Waller and Sylvie C. Fail and Hamish McWilliam and Rodrigo Lopez and Peter Parham and Steven G. E. Marsh}, title = {The {IMGT/HLA} database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {1013--1017}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn662}, doi = {10.1093/NAR/GKN662}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/RobinsonWFMLPM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/RomanoMAACP09, author = {Paolo Romano and Maria Assunta Manniello and Ottavia Aresu and Massimiliano Armento and Michela Cesaro and Barbara Parodi}, title = {Cell Line Data Base: structure and recent improvements towards molecular authentication of human cell lines}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {925--932}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn730}, doi = {10.1093/NAR/GKN730}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/RomanoMAACP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/RoseLGGH09, author = {Alexander S. Rose and Stephan Lorenzen and Andrean Goede and Bj{\"{o}}rn A. Gr{\"{u}}ning and Peter Werner Hildebrand}, title = {{RHYTHM} - a server to predict the orientation of transmembrane helices in channels and membrane-coils}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {575--580}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp418}, doi = {10.1093/NAR/GKP418}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/RoseLGGH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/RotherHGGP09, author = {Kristian Rother and Peter Werner Hildebrand and Andrean Goede and Bj{\"{o}}rn A. Gr{\"{u}}ning and Robert Preissner}, title = {Voronoia: analyzing packing in protein structures}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {393--395}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn769}, doi = {10.1093/NAR/GKN769}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/RotherHGGP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/RouillardG09, author = {Jean{-}Marie Rouillard and Erdogan Gulari}, title = {OligoArrayDb: pangenomic oligonucleotide microarray probe sets database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {938--941}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn761}, doi = {10.1093/NAR/GKN761}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/RouillardG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SadreyevTKG09, author = {Ruslan Sadreyev and Ming Tang and Bong{-}Hyun Kim and Nick V. Grishin}, title = {{COMPASS} server for homology detection: improved statistical accuracy, speed and functionality}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {90--94}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp360}, doi = {10.1093/NAR/GKP360}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SadreyevTKG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SaierYNTE09, author = {Milton H. Saier Jr. and Ming Ren Yen and Keith Noto and Dorjee G. Tamang and Charles Elkan}, title = {The Transporter Classification Database: recent advances}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {274--278}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn862}, doi = {10.1093/NAR/GKN862}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SaierYNTE09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SamarajiwaFAH09, author = {Shamith A. Samarajiwa and Sam Forster and Katie Auchettl and Paul J. Hertzog}, title = {{INTERFEROME:} the database of interferon regulated genes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {852--857}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn732}, doi = {10.1093/NAR/GKN732}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SamarajiwaFAH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SamsonL09, author = {Abraham O. Samson and Michael Levitt}, title = {Protein segment finder: an online search engine for segment motifs in the {PDB}}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {224--228}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn833}, doi = {10.1093/NAR/GKN833}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SamsonL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SankararamanKS09, author = {Sriram Sankararaman and Bryan Kolaczkowski and Kimmen Sj{\"{o}}lander}, title = {{INTREPID:} a web server for prediction of functionally important residues by evolutionary analysis}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {390--395}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp339}, doi = {10.1093/NAR/GKP339}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SankararamanKS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SatoHAM09, author = {Kengo Sato and Michiaki Hamada and Kiyoshi Asai and Toutai Mituyama}, title = {{CENTROIDFOLD:} a web server for {RNA} secondary structure prediction}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {277--280}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp367}, doi = {10.1093/NAR/GKP367}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SatoHAM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SayersBBBCCCDEFFGHKLLMMMMOPSSSSSSSTWYY09, author = {Eric W. Sayers and Tanya Barrett and Dennis A. Benson and Stephen H. Bryant and Kathi Canese and Vyacheslav Chetvernin and Deanna M. Church and Michael DiCuccio and Ron Edgar and Scott Federhen and Michael Feolo and Lewis Y. Geer and Wolfgang Helmberg and Yuri Kapustin and David Landsman and David J. Lipman and Thomas L. Madden and Donna R. Maglott and Vadim Miller and Ilene Karsch{-}Mizrachi and James Ostell and Kim D. Pruitt and Gregory D. Schuler and Edwin Sequeira and Stephen T. Sherry and Martin Shumway and Karl Sirotkin and Alexandre Souvorov and Grigory Starchenko and Tatiana A. Tatusova and Lukas Wagner and Eugene Yaschenko and Jian Ye}, title = {Database resources of the National Center for Biotechnology Information}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {5--15}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn741}, doi = {10.1093/NAR/GKN741}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SayersBBBCCCDEFFGHKLLMMMMOPSSSSSSSTWYY09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SchmidtSGHJPLTP09, author = {Ulrike Schmidt and Swantje Struck and Bj{\"{o}}rn A. Gr{\"{u}}ning and Julia Hossbach and Ines S. Jaeger and Roza Parol and Ulrike Lindequist and Eberhard Teuscher and Robert Preissner}, title = {SuperToxic: a comprehensive database of toxic compounds}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {295--299}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn850}, doi = {10.1093/NAR/GKN850}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SchmidtSGHJPLTP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SchreiberWM09, author = {Fabian Schreiber and Gert W{\"{o}}rheide and Burkhard Morgenstern}, title = {OrthoSelect: a web server for selecting orthologous gene alignments from {EST} sequences}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {185--188}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp434}, doi = {10.1093/NAR/GKP434}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SchreiberWM09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SchultzZBLKMS09, author = {Anne{-}Kathrin Schultz and Ming Zhang and Ingo Bulla and Thomas Leitner and Bette T. Korber and Burkhard Morgenstern and Mario Stanke}, title = {jpHMM: Improving the reliability of recombination prediction in {HIV-1}}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {647--651}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp371}, doi = {10.1093/NAR/GKP371}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SchultzZBLKMS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SchwartzHA09, author = {Schraga Schwartz and Eitan Hall and Gil Ast}, title = {{SROOGLE:} webserver for integrative, user-friendly visualization of splicing signals}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {189--192}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp320}, doi = {10.1093/NAR/GKP320}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SchwartzHA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SchweikertBZZOSR09, author = {Gabriele Beate Schweikert and Jonas Behr and Alexander Zien and Georg Zeller and Cheng Soon Ong and S{\"{o}}ren Sonnenburg and Gunnar R{\"{a}}tsch}, title = {\emph{mGene.web}: a web service for accurate computational gene finding}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {312--316}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp479}, doi = {10.1093/NAR/GKP479}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SchweikertBZZOSR09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SeelowSHN09, author = {Dominik Seelow and Markus Schuelke and Friedhelm Hildebrandt and Peter N{\"{u}}rnberg}, title = {HomozygosityMapper - an interactive approach to homozygosity mapping}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {593--599}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp369}, doi = {10.1093/NAR/GKP369}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/SeelowSHN09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SharmaMS09, author = {Deepak Sharma and Debasisa Mohanty and Avadhesha Surolia}, title = {RegAnalyst: a web interface for the analysis of regulatory motifs, networks and pathways}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {193--201}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp388}, doi = {10.1093/NAR/GKP388}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SharmaMS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ShermanMNCSD09, author = {David James Sherman and Tiphaine C. Martin and Macha Nikolski and Cyril Cayla and Jean{-}Luc Souciet and Pascal Durrens}, title = {G{\'{e}}nolevures: protein families and synteny among complete hemiascomycetous yeast proteomes and genomes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {550--554}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn859}, doi = {10.1093/NAR/GKN859}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ShermanMNCSD09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ShiCG09, author = {Shuoyong Shi and Bhadrachalam Chitturi and Nick V. Grishin}, title = {ProSMoS server: a pattern-based search using interaction matrix representation of protein structures}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {526--531}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp316}, doi = {10.1093/NAR/GKP316}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ShiCG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ShimadaMHSGYYIG09, author = {Makoto K. Shimada and Ryuzou Matsumoto and Yosuke Hayakawa and Ryoko Sanbonmatsu and Craig Gough and Yumi Yamaguchi{-}Kabata and Chisato Yamasaki and Tadashi Imanishi and Takashi Gojobori}, title = {VarySysDB: a human genetic polymorphism database based on all H-InvDB transcripts}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {810--815}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn798}, doi = {10.1093/NAR/GKN798}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ShimadaMHSGYYIG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ShionyuYSTG09, author = {Masafumi Shionyu and Akihiro Yamaguchi and Kazuki Shinoda and Ken{-}ichi Takahashi and Mitiko Go}, title = {{AS-ALPS:} a database for analyzing the effects of alternative splicing on protein structure, interaction and network in human and mouse}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {305--309}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn869}, doi = {10.1093/NAR/GKN869}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ShionyuYSTG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ShridharCY09, author = {Smriti Shridhar and Debasis Chattopadhyay and Gitanjali Yadav}, title = {PLecDom: a program for identification and analysis of plant lectin domains}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {452--458}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp409}, doi = {10.1093/NAR/GKP409}, timestamp = {Sat, 09 Apr 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ShridharCY09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/Shulman-PelegNW09, author = {Alexandra Shulman{-}Peleg and Ruth Nussinov and Haim J. Wolfson}, title = {RsiteDB: a database of protein binding pockets that interact with {RNA} nucleotide bases}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {369--373}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn759}, doi = {10.1093/NAR/GKN759}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/Shulman-PelegNW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SircarKG09, author = {Aroop Sircar and Eric T. Kim and Jeffrey J. Gray}, title = {RosettaAntibody: antibody variable region homology modeling server}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {474--479}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp387}, doi = {10.1093/NAR/GKP387}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SircarKG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SperandioPT09, author = {Olivier Sperandio and Michel Petitjean and Pierre Tuff{\'{e}}ry}, title = {wwLigCSRre: a 3D ligand-based server for hit identification and optimization}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {504--509}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp324}, doi = {10.1093/NAR/GKP324}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/SperandioPT09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SteinPA09, author = {Amelie Stein and Alejandro Panjkovich and Patrick Aloy}, title = {3did Update: domain-domain and peptide-mediated interactions of known 3D structure}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {300--304}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn690}, doi = {10.1093/NAR/GKN690}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SteinPA09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SugawaraIFGT09, author = {Hideaki Sugawara and Kazuho Ikeo and Satoshi Fukuchi and Takashi Gojobori and Yoshio Tateno}, title = {{DDBJ} dealing with mass data produced by the second generation sequencer}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {16--18}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn724}, doi = {10.1093/NAR/GKN724}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SugawaraIFGT09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SuhrerWGS09, author = {Stefan J. Suhrer and Markus Wiederstein and Markus Gruber and Manfred J. Sippl}, title = {{COPS} - a novel workbench for explorations in fold space}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {539--544}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp411}, doi = {10.1093/NAR/GKP411}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SuhrerWGS09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SunKHY09, author = {Choong{-}Hyun Sun and Min{-}Sung Kim and Youngwoong Han and Gwan{-}Su Yi}, title = {{COFECO:} composite function annotation enriched by protein complex data}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {350--355}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp331}, doi = {10.1093/NAR/GKP331}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SunKHY09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SunWXWXTLC09, author = {Jing Sun and Di Wu and Tianlei Xu and Xiaojing Wang and Xiaolian Xu and Lin Tao and Y. X. Li and Zhi{-}Wei Cao}, title = {{SEPPA:} a computational server for spatial epitope prediction of protein antigens}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {612--616}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp417}, doi = {10.1093/NAR/GKP417}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SunWXWXTLC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/SunZMFOW09, author = {Qi Sun and Boris L. Zybailov and Wojciech Majeran and Giulia Friso and Paul Dominic B. Olinares and Klaas J. van Wijk}, title = {PPDB, the Plant Proteomics Database at Cornell}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {969--974}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn654}, doi = {10.1093/NAR/GKN654}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/SunZMFOW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/TaccioliFVVCFGBAHIPRC09, author = {Cristian Taccioli and Enrica Fabbri and Rosa Visone and Stefano Volinia and George A. Calin and Louise Y. Fong and Roberto Gambari and Arianna Bottoni and Mario Acunzo and John Hagan and Marilena V. Iorio and Claudia Piovan and Giulia Romano and Carlo Maria Croce}, title = {UCbase {\&} miRfunc: a database of ultraconserved sequences and microRNA function}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {41--48}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn702}, doi = {10.1093/NAR/GKN702}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/TaccioliFVVCFGBAHIPRC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/TangZKTN09, author = {Suisheng Tang and Zhuo Zhang and Kavitha Gopalakrishnan and Eng{-}King Tan and See{-}Kiong Ng}, title = {{MDPD:} an integrated genetic information resource for Parkinson's disease}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {858--862}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn770}, doi = {10.1093/NAR/GKN770}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/TangZKTN09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/TarceaWABGMWCJOTCMPRASJ09, author = {V. Glenn Tarcea and Terry E. Weymouth and Alexander S. Ade and Aaron V. Bookvich and Jing Gao and Vasudeva Mahavisno and Zach Wright and Adriane Chapman and Magesh Jayapandian and Arzucan {\"{O}}zg{\"{u}}r and Yuanyuan Tian and James D. Cavalcoli and Barbara Mirel and Jignesh M. Patel and Dragomir R. Radev and Brian D. Athey and David J. States and H. V. Jagadish}, title = {Michigan molecular interactions r2: from interacting proteins to pathways}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {642--646}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn722}, doi = {10.1093/NAR/GKN722}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/TarceaWABGMWCJOTCMPRASJ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/TauferLAMBGL09, author = {Michela Taufer and Abel Licon and Roberto Araiza and David Mireles and F. H. D. van Batenburg and Alexander P. Gultyaev and Ming{-}Ying Leung}, title = {PseudoBase++: an extension of PseudoBase for easy searching, formatting and visualization of pseudoknots}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {127--135}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn806}, doi = {10.1093/NAR/GKN806}, timestamp = {Sat, 05 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/TauferLAMBGL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/TeggeWEC09, author = {Allison N. Tegge and Zheng Wang and Jesse Eickholt and Jianlin Cheng}, title = {NNcon: improved protein contact map prediction using 2D-recursive neural networks}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {515--518}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp305}, doi = {10.1093/NAR/GKP305}, timestamp = {Mon, 15 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/TeggeWEC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/TestaMW09, author = {Oliver D. Testa and Efrosini Moutevelis and Derek N. Woolfson}, title = {{CC+:} a relational database of coiled-coil structures}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {315--322}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn675}, doi = {10.1093/NAR/GKN675}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/TestaMW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ThongjueaRBV09, author = {Supat Thongjuea and Vinitchan Ruanjaichon and Richard M. Bruskiewich and Apichart Vanavichit}, title = {RiceGeneThresher: a web-based application for mining genes underlying {QTL} in rice genome}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {996--1000}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn638}, doi = {10.1093/NAR/GKN638}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/ThongjueaRBV09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ThorissonLFHSDBB09, author = {Gudmundur A. Thorisson and Owen Lancaster and Robert C. Free and Robert K. Hastings and Pallavi Sarmah and Debasis Dash and Samir K. Brahmachari and Anthony J. Brookes}, title = {HGVbaseG2P: a central genetic association database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {797--802}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn748}, doi = {10.1093/NAR/GKN748}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ThorissonLFHSDBB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ToussaintK09, author = {Nora C. Toussaint and Oliver Kohlbacher}, title = {OptiTope - a web server for the selection of an optimal set of peptides for epitope-based vaccines}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {617--622}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp293}, doi = {10.1093/NAR/GKP293}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ToussaintK09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/TsengDCL09, author = {Yan Yuan Tseng and Craig Dupree and Z. Jeffrey Chen and Wen{-}Hsiung Li}, title = {SplitPocket: identification of protein functional surfaces and characterization of their spatial patterns}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {384--389}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp308}, doi = {10.1093/NAR/GKP308}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/TsengDCL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/TsouTYCYYLCSH09, author = {Chih{-}Chiang Tsou and Yin{-}Hao Tsui and Yi{-}Hwa Yian and Yi{-}Ju Chen and Han{-}Yin Yang and Chuan{-}Yih Yu and Ke{-}Shiuan Lynn and Yu{-}Ju Chen and Ting{-}Yi Sung and Wen{-}Lian Hsu}, title = {MaXIC-Q Web: a fully automated web service using statistical and computational methods for protein quantitation based on stable isotope labeling and {LC-MS}}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {661--669}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp476}, doi = {10.1093/NAR/GKP476}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/TsouTYCYYLCSH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/TweedieAFLMMMOSSZ09, author = {Susan Tweedie and Michael Ashburner and Kathleen Falls and Paul C. Leyland and Peter McQuilton and Steven J. Marygold and Gillian H. Millburn and David Osumi{-}Sutherland and Andrew J. Schroeder and Ruth L. Seal and Haiyan Zhang}, title = {FlyBase: enhancing \emph{Drosophila} Gene Ontology annotations}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {555--559}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn788}, doi = {10.1093/NAR/GKN788}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/TweedieAFLMMMOSSZ09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/VazquezCNCTCP09, author = {Miguel V{\'{a}}zquez and Pedro Carmona{-}Saez and Rub{\'{e}}n Nogales{-}Cadenas and Monica Chagoyen and Francisco Tirado and Jos{\'{e}} Mar{\'{\i}}a Carazo and Alberto D. Pascual{-}Montano}, title = {{SENT:} semantic features in text}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {153--159}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp392}, doi = {10.1093/NAR/GKP392}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/VazquezCNCTCP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WakaguriSKKKHSSW09, author = {Hiroyuki Wakaguri and Yutaka Suzuki and Toshiaki Katayama and Shuichi Kawashima and Eri Kibukawa and Kazushi Hiranuka and Masahide Sasaki and Sumio Sugano and Junichi Watanabe}, title = {Full-Malaria/Parasites and Full-Arthropods: databases of full-length cDNAs of parasites and arthropods, update 2009}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {520--525}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn856}, doi = {10.1093/NAR/GKN856}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/WakaguriSKKKHSSW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WaldispuhlDBC09, author = {J{\'{e}}r{\^{o}}me Waldisp{\"{u}}hl and Srinivas Devadas and Bonnie Berger and Peter Clote}, title = {RNAmutants: a web server to explore the mutational landscape of {RNA} secondary structures}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {281--286}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp477}, doi = {10.1093/NAR/GKP477}, timestamp = {Tue, 07 May 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/WaldispuhlDBC09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WalterRAGMNKTWVPJMF09, author = {Mathias C. Walter and Thomas Rattei and Roland Arnold and Ulrich G{\"{u}}ldener and Martin M{\"{u}}nsterk{\"{o}}tter and Karamfilka Nenova and Gabi Kastenm{\"{u}}ller and Patrick Tischler and Andreas W{\"{o}}lling and Andreas Volz and Norbert Pongratz and Ralf Jost and Hans{-}Werner Mewes and Dmitrij Frishman}, title = {{PEDANT} covers all complete RefSeq genomes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {408--411}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn749}, doi = {10.1093/NAR/GKN749}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/WalterRAGMNKTWVPJMF09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WangLW09, author = {Guangshun Wang and Xia Li and Zhe Wang}, title = {{APD2:} the updated antimicrobial peptide database and its application in peptide design}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {933--937}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn823}, doi = {10.1093/NAR/GKN823}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/WangLW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WangXSZWB09, author = {Yanli Wang and Jewen Xiao and Tugba O. Suzek and Jian Zhang and Jiyao Wang and Stephen H. Bryant}, title = {PubChem: a public information system for analyzing bioactivities of small molecules}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {623--633}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp456}, doi = {10.1093/NAR/GKP456}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/WangXSZWB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WhitakerLMW09, author = {John W. Whitaker and Ivica Letunic and Glenn A. McConkey and David R. Westhead}, title = {metaTIGER: a metabolic evolution resource}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {531--538}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn826}, doi = {10.1093/NAR/GKN826}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/WhitakerLMW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WichadakulNI09, author = {Duangdao Wichadakul and Somrak Numnark and Supawadee Ingsriswang}, title = {d-Omix: a mixer of generic protein domain analysis tools}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {417--421}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp329}, doi = {10.1093/NAR/GKP329}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/WichadakulNI09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WilsonPZTVMCG09, author = {Derek Wilson and Ralph Pethica and Yiduo Zhou and Charles Talbot and Christine Vogel and Martin Madera and Cyrus Chothia and Julian Gough}, title = {{SUPERFAMILY} - sophisticated comparative genomics, data mining, visualization and phylogeny}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {380--386}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn762}, doi = {10.1093/NAR/GKN762}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/WilsonPZTVMCG09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WinsorRLKWHB09, author = {Geoffrey L. Winsor and Thea Van Rossum and Raymond Lo and Bhavjinder Khaira and Matthew D. Whiteside and Robert E. W. Hancock and Fiona S. L. Brinkman}, title = {Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {483--488}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn861}, doi = {10.1093/NAR/GKN861}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/WinsorRLKWHB09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/WishartKGEYGHPDBMSXJCLSSHLFPFCTCLSZDXCGNSLVF09, author = {David S. Wishart and Craig Knox and Anchi Guo and Roman Eisner and Nelson Young and Bijaya Gautam and David D. Hau and Nick Psychogios and Edison Dong and Souhaila Bouatra and Rupasri Mandal and Igor Sinelnikov and Jianguo Xia and Leslie Jia and Joseph A. Cruz and Emilia Lim and Constance A. Sobsey and Savita Shrivastava and Paul Huang and Philip Liu and Lydia Fang and Jun Peng and Ryan Fradette and Dean Cheng and Dan Tzur and Melisa Clements and Avalyn Lewis and Andrea De Souza and Azaret Zuniga and Margot Dawe and Yeping Xiong and Derrick Clive and Russell Greiner and Alsu Nazyrova and Rustem Shaykhutdinov and Liang Li and Hans J. Vogel and Ian J. Forsythe}, title = {{HMDB:} a knowledgebase for the human metabolome}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {603--610}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn810}, doi = {10.1093/NAR/GKN810}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/WishartKGEYGHPDBMSXJCLSSHLFPFCTCLSZDXCGNSLVF09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/XiPDLL09, author = {Hong Xi and Jongsun Park and Guohui Ding and Yong{-}Hwan Lee and Yixue Li}, title = {SysPIMP: the web-based systematical platform for identifying human disease-related mutated sequences from mass spectrometry}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {913--920}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn848}, doi = {10.1093/NAR/GKN848}, timestamp = {Wed, 13 Jan 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/XiPDLL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/XiaPYW09, author = {Jianguo Xia and Nick Psychogios and Nelson Young and David S. Wishart}, title = {MetaboAnalyst: a web server for metabolomic data analysis and interpretation}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {652--660}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp356}, doi = {10.1093/NAR/GKP356}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/XiaPYW09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/XiaoZCKGL09, author = {Feifei Xiao and Zhixiang Zuo and Guoshuai Cai and Shuli Kang and Xiaolian Gao and Tongbin Li}, title = {miRecords: an integrated resource for microRNA-target interactions}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {105--110}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn851}, doi = {10.1093/NAR/GKN851}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/XiaoZCKGL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/XinO09, author = {Yurong Xin and Wilma K. Olson}, title = {{BPS:} a database of {RNA} base-pair structures}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {83--88}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn676}, doi = {10.1093/NAR/GKN676}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/XinO09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/XuH09, author = {Zhao Xu and Bailin Hao}, title = {CVTree update: a newly designed phylogenetic study platform using composition vectors and whole genomes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {174--178}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp278}, doi = {10.1093/NAR/GKP278}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/XuH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/XuT09, author = {Zongli Xu and Jack A. Taylor}, title = {SNPinfo: integrating {GWAS} and candidate gene information into functional {SNP} selection for genetic association studies}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {600--605}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp290}, doi = {10.1093/NAR/GKP290}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/XuT09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/YangLCXH09, author = {Lun Yang and Heng Luo and Jian Chen and Qinghe Xing and Lin He}, title = {SePreSA: a server for the prediction of populations susceptible to serious adverse drug reactions implementing the methodology of a chemical-protein interactome}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {406--412}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp312}, doi = {10.1093/NAR/GKP312}, timestamp = {Tue, 11 May 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/YangLCXH09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/YangLLMOKK09, author = {In Seok Yang and Joo{-}Yeon Lee and Joon Seung Lee and Wayne P. Mitchell and Hee{-}Bok Oh and Chun Kang and Kyung Hyun Kim}, title = {Influenza sequence and epitope database}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {423--430}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn881}, doi = {10.1093/NAR/GKN881}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/YangLLMOKK09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/YoshidaMHAMIMMWKT09, author = {Yuko Yoshida and Yuko Makita and Naohiko Heida and Satomi Asano and Akihiro Matsushima and Manabu Ishii and Yoshiki Mochizuki and Hiroshi Masuya and Shigeharu Wakana and Norio Kobayashi and Tetsuro Toyoda}, title = {PosMed (Positional Medline): prioritizing genes with an artificial neural network comprising medical documents to accelerate positional cloning}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {147--152}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp384}, doi = {10.1093/NAR/GKP384}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/YoshidaMHAMIMMWKT09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ZambelliPP09, author = {Federico Zambelli and Graziano Pesole and Giulio Pavesi}, title = {Pscan: finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {247--252}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp464}, doi = {10.1093/NAR/GKP464}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ZambelliPP09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ZerlotiniHWMDRKO09, author = {Adhemar Zerlotini and Mark Heiges and Haiming Wang and Romulo L. V. Moraes and Anderson J. Dominitini and Jer{\^{o}}nimo C. Ruiz and Jessica C. Kissinger and Guilherme C. Oliveira}, title = {SchistoDB: a \emph{Schistosoma mansoni} genome resource}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {579--582}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn681}, doi = {10.1093/NAR/GKN681}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ZerlotiniHWMDRKO09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ZhangL09, author = {Ren Zhang and Yan Lin}, title = {{DEG} 5.0, a database of essential genes in both prokaryotes and eukaryotes}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Database-Issue}, pages = {455--458}, year = {2009}, url = {https://doi.org/10.1093/nar/gkn858}, doi = {10.1093/NAR/GKN858}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ZhangL09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ZhengLO09, author = {Guohui Zheng and Xiang{-}Jun Lu and Wilma K. Olson}, title = {Web 3DNA - a web server for the analysis, reconstruction, and visualization of three-dimensional nucleic-acid structures}, journal = {Nucleic Acids Res.}, volume = {37}, number = {Web-Server-Issue}, pages = {240--246}, year = {2009}, url = {https://doi.org/10.1093/nar/gkp358}, doi = {10.1093/NAR/GKP358}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ZhengLO09.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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