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@article{DBLP:journals/jossw/AlvesDKGCL24,
author = {Victor Alves and
San Dinh and
John R. Kitchin and
Vitor Gazzaneo and
Juan C. Carrasco and
Fernando V. Lima},
title = {Opyrability: {A} Python package for process operability analysis},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5966},
year = {2024},
url = {https://doi.org/10.21105/joss.05966},
doi = {10.21105/JOSS.05966},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/AlvesDKGCL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Andrews24,
author = {Bartholomew Andrews},
title = {HofstadterTools: {A} Python package for analyzing the Hofstadter model},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6356},
year = {2024},
url = {https://doi.org/10.21105/joss.06356},
doi = {10.21105/JOSS.06356},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Andrews24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Ansmann24,
author = {Gerrit Ansmann},
title = {A Python module to combine {\textdollar}p{\textdollar} values arising
from discrete tests},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6096},
year = {2024},
url = {https://doi.org/10.21105/joss.06096},
doi = {10.21105/JOSS.06096},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Ansmann24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Augustin24,
author = {David Augustin},
title = {Chi: {A} Python package for treatment response modelling},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5925},
year = {2024},
url = {https://doi.org/10.21105/joss.05925},
doi = {10.21105/JOSS.05925},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/Augustin24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/AurrekoetxeaBBCHMRTW24,
author = {Josu C. Aurrekoetxea and
Jamie Bamber and
Sam E. Brady and
Katy Clough and
Thomas Helfer and
James Marsden and
Miren Radia and
Dina Traykova and
Zipeng Wang},
title = {GRDzhadzha: {A} code for evolving relativistic matter on analytic
metric backgrounds},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5956},
year = {2024},
url = {https://doi.org/10.21105/joss.05956},
doi = {10.21105/JOSS.05956},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/AurrekoetxeaBBCHMRTW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/BatistaCFHLLMOSSSWWYZ24,
author = {Quentin Batista and
Chase Coleman and
Yuya Furusawa and
Shu Hu and
Smit Lunagariya and
Spencer Lyon and
Matthew McKay and
Daisuke Oyama and
Thomas J. Sargent and
Zejin Shi and
John Stachurski and
Pablo Winant and
Natasha Watkins and
Ziyue Yang and
Hengcheng Zhang},
title = {QuantEcon.py: {A} community based Python library for quantitative
economics},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {5585},
year = {2024},
url = {https://doi.org/10.21105/joss.05585},
doi = {10.21105/JOSS.05585},
timestamp = {Mon, 15 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/BatistaCFHLLMOSSSWWYZ24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/BerlokJPH24,
author = {Thomas Berlok and
L{\'{e}}na Jlassi and
Ewald Puchwein and
Troels Haugb{\o}lle},
title = {Paicos: {A} Python package for analysis of (cosmological) simulations
performed with Arepo},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6296},
year = {2024},
url = {https://doi.org/10.21105/joss.06296},
doi = {10.21105/JOSS.06296},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/BerlokJPH24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/BourasGPMR24,
author = {George Bouras and
Susanna R. Grigson and
Bhavya Nalagampalli Papudeshi and
Vijini Mallawaarachchi and
Michael J. Roach},
title = {Dnaapler: {A} tool to reorient circular microbial genomes},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5968},
year = {2024},
url = {https://doi.org/10.21105/joss.05968},
doi = {10.21105/JOSS.05968},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/BourasGPMR24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/BradleyABWB24,
author = {Alexander T. Bradley and
Robert J. Arthern and
David T. Bett and
C. Rosie Williams and
James Byrne},
title = {WAVI.jl: Ice Sheet Modelling in Julia},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5584},
year = {2024},
url = {https://doi.org/10.21105/joss.05584},
doi = {10.21105/JOSS.05584},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/BradleyABWB24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/BrownF24,
author = {Shael Brown and
Reza Farivar{-}Mohseni},
title = {TDApplied: An {R} package for machine learning and inference with
persistence diagrams},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6321},
year = {2024},
url = {https://doi.org/10.21105/joss.06321},
doi = {10.21105/JOSS.06321},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/BrownF24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/BuchauMBSSJMHB24,
author = {Yann Georg B{\"{u}}chau and
Hasan Mashni and
Matteo Bramati and
Vasileios Savvakis and
Ines Sch{\"{a}}fer and
Saskia Jung and
Gabriela Miranda{-}Garcia and
Daniel Hardt and
Jens Bange},
title = {{PARMESAN:} Meteorological Timeseries and Turbulence Analysis Backed
by Symbolic Mathematics},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {6127},
year = {2024},
url = {https://doi.org/10.21105/joss.06127},
doi = {10.21105/JOSS.06127},
timestamp = {Mon, 01 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/BuchauMBSSJMHB24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/BuchauerI24,
author = {Lisa Buchauer and
Shalev Itzkovitz},
title = {cellanneal: {A} user-friendly deconvolution software for transcriptomics
data},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {5610},
year = {2024},
url = {https://doi.org/10.21105/joss.05610},
doi = {10.21105/JOSS.05610},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/BuchauerI24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/BudzinskiRD24,
author = {Maik Budzinski and
Jo{\~{a}}o F. D. Rodrigues and
Mathieu Delpierre},
title = {bonsai{\_}ipcc - a Python package for the calculation of national
greenhouse gas inventories},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6123},
year = {2024},
url = {https://doi.org/10.21105/joss.06123},
doi = {10.21105/JOSS.06123},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/BudzinskiRD24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/ByrohlN24,
author = {Chris Byrohl and
Dylan Nelson},
title = {scida: scalable analysis for scientific big data},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6064},
year = {2024},
url = {https://doi.org/10.21105/joss.06064},
doi = {10.21105/JOSS.06064},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/ByrohlN24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/CaiLCFZ24,
author = {Meng Cai and
Yingjie Li and
Dirk Colbry and
Veronica F. Frans and
Yuqian Zhang},
title = {seesus: a social, environmental, and economic sustainability classifier
for Python},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6244},
year = {2024},
url = {https://doi.org/10.21105/joss.06244},
doi = {10.21105/JOSS.06244},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/CaiLCFZ24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/CannoodtCSWKBMV24,
author = {Robrecht Cannoodt and
Hendrik Cannoodt and
Dries Schaumont and
Kai Waldrant and
Eric Van de Kerckhove and
Andy Boschmans and
Dries De Maeyer and
Toni Verbeiren},
title = {Viash: {A} meta-framework for building reusable workflow modules},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {6089},
year = {2024},
url = {https://doi.org/10.21105/joss.06089},
doi = {10.21105/JOSS.06089},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/CannoodtCSWKBMV24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/CasadoVG24,
author = {Johanna Casado and
Gonzalo de la Vega and
Beatriz Garc{\'{\i}}a},
title = {SonoUno development: a User-Centered Sonification software for data
analysis},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5819},
year = {2024},
url = {https://doi.org/10.21105/joss.05819},
doi = {10.21105/JOSS.05819},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/CasadoVG24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/CastelaoI24,
author = {Guilherme P. Castel{\~{a}}o and
Luiz Irber},
title = {Gibbs Sea Water Oceanographic Toolbox of {TEOS-10} implemented in
Rust},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {5988},
year = {2024},
url = {https://doi.org/10.21105/joss.05988},
doi = {10.21105/JOSS.05988},
timestamp = {Fri, 26 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/CastelaoI24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/ChafinMDD24,
author = {Tyler K. Chafin and
Steven M. Mussmann and
Marlis R. Douglas and
Michael E. Douglas},
title = {autoStreamTree: Genomic variant data fitted to geospatial networks},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6160},
year = {2024},
url = {https://doi.org/10.21105/joss.06160},
doi = {10.21105/JOSS.06160},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/ChafinMDD24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/ChenG24,
author = {Xinye Chen and
Stefan G{\"{u}}ttel},
title = {fABBA: {A} Python library for the fast symbolic approximation of time
series},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6294},
year = {2024},
url = {https://doi.org/10.21105/joss.06294},
doi = {10.21105/JOSS.06294},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/ChenG24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/ChenGZ24,
author = {Yangkang Chen and
Zhongru Gu and
Xiangjiang Zhan},
title = {stemflow: {A} Python Package for Adaptive Spatio-Temporal Exploratory
Model},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6158},
year = {2024},
url = {https://doi.org/10.21105/joss.06158},
doi = {10.21105/JOSS.06158},
timestamp = {Mon, 29 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/ChenGZ24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Chipman24,
author = {Damyn Chipman},
title = {EllipticForest: {A} Direct Solver Library for Elliptic Partial Differential
Equations on Adaptive Meshes},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6339},
year = {2024},
url = {https://doi.org/10.21105/joss.06339},
doi = {10.21105/JOSS.06339},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Chipman24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/CollinsBL24,
author = {Brendan Collins and
Ryan Beams and
Miguel A. Lago},
title = {Open-Source Pattern Creation Tool for Medical Extended Reality Image
Quality Assessment},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {6021},
year = {2024},
url = {https://doi.org/10.21105/joss.06021},
doi = {10.21105/JOSS.06021},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/CollinsBL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/CrescenziNRS24,
author = {Pierluigi Crescenzi and
Emanuele Natale and
Aurora Rossi and
Paulo Bruno S. Serafim},
title = {WorldDynamics.jl: {A} Julia Package for Developing and Simulating
Integrated Assessment Models},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5772},
year = {2024},
url = {https://doi.org/10.21105/joss.05772},
doi = {10.21105/JOSS.05772},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/CrescenziNRS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/CrocioniBBPRRBMTX24,
author = {Giulia Crocioni and
Dani L. Bodor and
Coos Baakman and
Farzaneh M. Parizi and
Daniel{-}T. Rademaker and
Gayatri Ramakrishnan and
Sven van der Burg and
Dario F. Marzella and
Jo{\~{a}}o M. C. Teixeira and
Li C. Xue},
title = {DeepRank2: Mining 3D Protein Structures with Geometric Deep Learning},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5983},
year = {2024},
url = {https://doi.org/10.21105/joss.05983},
doi = {10.21105/JOSS.05983},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/CrocioniBBPRRBMTX24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/DAndreaF24,
author = {Florencia D'Andrea and
Pilar Fern{\'{a}}ndez},
title = {quadkeyr: Tools for converting QuadKey-identified datasets (Microsoft's
Bing Maps Tile System) into raster images and analyzing Meta (Facebook)
Mobility Data},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6500},
year = {2024},
url = {https://doi.org/10.21105/joss.06500},
doi = {10.21105/JOSS.06500},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/DAndreaF24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Dalle24,
author = {Guillaume Dalle},
title = {HiddenMarkovModels.jl: generic, fast and reliable state space modeling},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6436},
year = {2024},
url = {https://doi.org/10.21105/joss.06436},
doi = {10.21105/JOSS.06436},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Dalle24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/DelaporteAKJMI24,
author = {Baptiste Delaporte and
Thomas Arsouze and
Gunnar Keppel and
Swen Jullien and
Christophe Menkes and
Thomas Ibanez},
title = {StormR: An {R} package to quantify and map the tropical storms and
cyclones' winds characteristics},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5766},
year = {2024},
url = {https://doi.org/10.21105/joss.05766},
doi = {10.21105/JOSS.05766},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/DelaporteAKJMI24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/DevunuriL24,
author = {Saipraneeth Devunuri and
Lewis Lehe},
title = {{GTFS} Segments: {A} Fast and Efficient Library to Generate Bus Stop
Spacings},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6306},
year = {2024},
url = {https://doi.org/10.21105/joss.06306},
doi = {10.21105/JOSS.06306},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/DevunuriL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Dirmeier24,
author = {Simon Dirmeier},
title = {Surjectors: surjection layers for density estimation with normalizing
flows},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6188},
year = {2024},
url = {https://doi.org/10.21105/joss.06188},
doi = {10.21105/JOSS.06188},
timestamp = {Mon, 29 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Dirmeier24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/DolciMHPH24,
author = {Daiane I. Dolci and
James R. Maddison and
David A. Ham and
Guillaume Pallez and
Julien Herrmann},
title = {checkpoint{\_}schedules: schedules for incremental checkpointing of
adjoint simulations},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6148},
year = {2024},
url = {https://doi.org/10.21105/joss.06148},
doi = {10.21105/JOSS.06148},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/DolciMHPH24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/DuncanTEBY24,
author = {James Duncan and
Tiffany M. Tang and
Corrine F. Elliott and
Philippe Boileau and
Bin Yu},
title = {simChef: High-quality data science simulations in {R}},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6156},
year = {2024},
url = {https://doi.org/10.21105/joss.06156},
doi = {10.21105/JOSS.06156},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/DuncanTEBY24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/EerolaC24,
author = {Tuomas Eerola and
Martin Clayton},
title = {onsetsync: An {R} Package for Onset Synchrony Analysis},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {5395},
year = {2024},
url = {https://doi.org/10.21105/joss.05395},
doi = {10.21105/JOSS.05395},
timestamp = {Fri, 26 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/EerolaC24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/ElseGHB24,
author = {Thomas R. Else and
Janek Gr{\"{o}}hl and
Lina Hacker and
Sarah E. Bohndiek},
title = {{PATATO:} a Python photoacoustic tomography analysis toolkit},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {5686},
year = {2024},
url = {https://doi.org/10.21105/joss.05686},
doi = {10.21105/JOSS.05686},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/ElseGHB24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/EsSSO24,
author = {Mats W. J. van Es and
Eelke Spaak and
Jan{-}Mathijs Schoffelen and
Robert Oostenveld},
title = {Reducing the efforts to create reproducible analysis code with FieldTrip},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5566},
year = {2024},
url = {https://doi.org/10.21105/joss.05566},
doi = {10.21105/JOSS.05566},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/EsSSO24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/FarmerM24,
author = {Carson Farmer and
H{\'{e}}ctor Medina},
title = {Hyperelastics.jl: {A} Julia package for hyperelastic material modelling
with a large collection of models},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6314},
year = {2024},
url = {https://doi.org/10.21105/joss.06314},
doi = {10.21105/JOSS.06314},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/FarmerM24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/FeretB24,
author = {Jean{-}Baptiste F{\'{e}}ret and
Florian de Boissieu},
title = {prospect: an {R} package to link leaf optical properties with their
chemical and structural properties with the leaf model {PROSPECT}},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {6027},
year = {2024},
url = {https://doi.org/10.21105/joss.06027},
doi = {10.21105/JOSS.06027},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/FeretB24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/FrankJL24,
author = {David Frank and
Jonas Jelten and
Tobias Lasser},
title = {elsa: an elegant framework for tomographic reconstruction},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {6174},
year = {2024},
url = {https://doi.org/10.21105/joss.06174},
doi = {10.21105/JOSS.06174},
timestamp = {Mon, 01 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/FrankJL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Frerebeau24,
author = {Nicolas Frerebeau},
title = {aion: An {R} Package to Represent Archaeological Time Series},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6210},
year = {2024},
url = {https://doi.org/10.21105/joss.06210},
doi = {10.21105/JOSS.06210},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Frerebeau24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/FuchsLJWK24,
author = {Alexander D. Fuchs and
Johannes A. F. Lehmeyer and
Heinz Junkes and
Heiko B. Weber and
Michael Krieger},
title = {{NOMAD} {CAMELS:} Configurable Application for Measurements, Experiments
and Laboratory Systems},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6371},
year = {2024},
url = {https://doi.org/10.21105/joss.06371},
doi = {10.21105/JOSS.06371},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/FuchsLJWK24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/GarciaCifuentesBC24,
author = {Keneth Garcia{-}Cifuentes and
Rosa L. Becerra and
Fabio De Colle},
title = {ClassiPyGRB: Machine Learning-Based Classification and Visualization
of Gamma Ray Bursts using t-SNE},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5923},
year = {2024},
url = {https://doi.org/10.21105/joss.05923},
doi = {10.21105/JOSS.05923},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/GarciaCifuentesBC24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/GardML24,
author = {Andrew Gard and
Alexia Myers and
Irene Luwabelwa},
title = {The fqar package: {R} tools for analyzing floristic quality assessment
data},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6366},
year = {2024},
url = {https://doi.org/10.21105/joss.06366},
doi = {10.21105/JOSS.06366},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/GardML24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/GargiuloDAB24,
author = {Maria Gargiulo and
Mar{\'{\i}}a J. Dur{\'{a}}n and
Paula Andrea Amado and
Patrick Ball},
title = {verdata: An {R} package for analyzing data from the Truth Commission
in Colombia},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {5844},
year = {2024},
url = {https://doi.org/10.21105/joss.05844},
doi = {10.21105/JOSS.05844},
timestamp = {Sat, 10 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/GargiuloDAB24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/GarrisonHLTB24,
author = {S. Mason Garrison and
Michael D. Hunter and
Xuanyu Lyu and
Jonathan D. Trattner and
S. Alexandra Burt},
title = {BGmisc: An {R} Package for Extended Behavior Genetics Analysis},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6203},
year = {2024},
url = {https://doi.org/10.21105/joss.06203},
doi = {10.21105/JOSS.06203},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/GarrisonHLTB24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/GreeneEPHSE24,
author = {Chad A. Greene and
Svetlana Erofeeva and
Laurie Padman and
Susan L. Howard and
Tyler Clark Sutterley and
Gary D. Egbert},
title = {Tide Model Driver for {MATLAB}},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6018},
year = {2024},
url = {https://doi.org/10.21105/joss.06018},
doi = {10.21105/JOSS.06018},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/GreeneEPHSE24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/GrigorevFBGGGHKMNOPRRSWWZKP24,
author = {Petr Grigorev and
Lucas Fr{\'{e}}rot and
Fraser Birks and
Adrien Gola and
Jacek Golebiowski and
Jan Grie{\ss}er and
Johannes L. H{\"{o}}rmann and
Andreas Klemenz and
Gianpietro Moras and
Wolfram G. N{\"{o}}hring and
Jonas A. Oldenstaedt and
Punit Patel and
Thomas Reichenbach and
Thomas Rocke and
Lakshmi Shenoy and
Michael Walter and
Simon Wengert and
Lei Zhang and
James R. Kermode and
Lars Pastewka},
title = {matscipy: materials science at the atomic scale with Python},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {5668},
year = {2024},
url = {https://doi.org/10.21105/joss.05668},
doi = {10.21105/JOSS.05668},
timestamp = {Fri, 08 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/GrigorevFBGGGHKMNOPRRSWWZKP24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/GuptaVTGHHR24,
author = {Rohini S. Gupta and
Chris R. Vernon and
Travis Thurber and
David F. Gold and
Zachary M. Hirsch and
Antonia Hadjimichael and
Patrick M. Reed},
title = {statemodify: a Python framework to facilitate accessible exploratory
modeling for discovering drought vulnerabilities},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6325},
year = {2024},
url = {https://doi.org/10.21105/joss.06325},
doi = {10.21105/JOSS.06325},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/GuptaVTGHHR24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Haldar24,
author = {Indrajeet Haldar},
title = {The plebeian Graph Library: {A} WebGL based network visualisation
and diagnostics package},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5887},
year = {2024},
url = {https://doi.org/10.21105/joss.05887},
doi = {10.21105/JOSS.05887},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Haldar24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/HennekingPFBD24,
author = {Stefan Henneking and
Socratis Petrides and
Federico Fuentes and
Jacob C. Badger and
Leszek F. Demkowicz},
title = {{\textdollar}hp{\textbackslash}mathrm\{3D\}{\textdollar}: {A} Scalable
MPI/OpenMP {\textdollar}hp{\textdollar}-Adaptive Finite Element Software
Library for Complex Multiphysics Applications},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5946},
year = {2024},
url = {https://doi.org/10.21105/joss.05946},
doi = {10.21105/JOSS.05946},
timestamp = {Fri, 17 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/HennekingPFBD24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/HeunMA24,
author = {Matthew Kuperus Heun and
Zeke Marshall and
Emmanuel Aramendia},
title = {CLPFUDatabase: {A} suite of {R} packages for energy conversion chain
analysis},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {6057},
year = {2024},
url = {https://doi.org/10.21105/joss.06057},
doi = {10.21105/JOSS.06057},
timestamp = {Fri, 26 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/HeunMA24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Hirschvogel24,
author = {Marc Hirschvogel},
title = {Ambit - {A} FEniCS-based cardiovascular multi-physics solver},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5744},
year = {2024},
url = {https://doi.org/10.21105/joss.05744},
doi = {10.21105/JOSS.05744},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/Hirschvogel24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/HollT24,
author = {Philipp Holl and
Nils Thuerey},
title = {{\(\Phi\)}-ML: Intuitive Scientific Computing with Dimension Types
for Jax, PyTorch, TensorFlow {\&} NumPy},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6171},
year = {2024},
url = {https://doi.org/10.21105/joss.06171},
doi = {10.21105/JOSS.06171},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/HollT24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Hudde24,
author = {Anselm Hudde},
title = {greeks: Sensitivities of Prices of Financial Options and Implied Volatilities},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5987},
year = {2024},
url = {https://doi.org/10.21105/joss.05987},
doi = {10.21105/JOSS.05987},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Hudde24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/HuntIsaakRH24,
author = {Ian Hunt{-}Isaak and
John Russell and
Doeke Hekstra},
title = {mpl-interactions: {A} Python Package for Interactive Matplotlib Figures},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {5651},
year = {2024},
url = {https://doi.org/10.21105/joss.05651},
doi = {10.21105/JOSS.05651},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/HuntIsaakRH24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/IskenN24,
author = {Mark W. Isken and
Jacob W. Norman},
title = {hillmaker: {A} Python package for occupancy analysis in discrete entity
flow systems},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {6154},
year = {2024},
url = {https://doi.org/10.21105/joss.06154},
doi = {10.21105/JOSS.06154},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/IskenN24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/JacobD24,
author = {Akkarapakam Suneesh Jacob and
Rituparna Datta},
title = {Automatic Computation for Robot Design (ACRoD): {A} Python package
for numerical calculation of Jacobian of a robot at a given configuration
around a specified end-effector point},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5927},
year = {2024},
url = {https://doi.org/10.21105/joss.05927},
doi = {10.21105/JOSS.05927},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/JacobD24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/JohansenAFDJS24,
author = {Frederik L. Johansen and
Andy S. Anker and
Ulrik Friis{-}Jensen and
Erik B. Dam and
Kirsten M. {\O}. Jensen and
Raghavendra Selvan},
title = {A GPU-Accelerated Open-Source Python Package for Calculating Powder
Diffraction, Small-Angle-, and Total Scattering with the Debye Scattering
Equation},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6024},
year = {2024},
url = {https://doi.org/10.21105/joss.06024},
doi = {10.21105/JOSS.06024},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/JohansenAFDJS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Johnson24,
author = {Reid A. Johnson},
title = {quantile-forest: {A} Python Package for Quantile Regression Forests},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5976},
year = {2024},
url = {https://doi.org/10.21105/joss.05976},
doi = {10.21105/JOSS.05976},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/Johnson24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/JohnsonAR24,
author = {J. Michael Johnson and
Shahab Afshari and
Arash Modaresi Rad},
title = {AHGestimation: An {R} package for computing robust, mass preserving
hydraulic geometries and rating curves},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6145},
year = {2024},
url = {https://doi.org/10.21105/joss.06145},
doi = {10.21105/JOSS.06145},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/JohnsonAR24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Joshy24,
author = {Vivek Joshy},
title = {OpenSkill: {A} faster asymmetric multi-team, multiplayer rating system},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {5901},
year = {2024},
url = {https://doi.org/10.21105/joss.05901},
doi = {10.21105/JOSS.05901},
timestamp = {Fri, 26 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/Joshy24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/JustelS24,
author = {Alexander J{\"{u}}stel and
Frank Strozyk},
title = {PyHeatDemand - Processing Tool for Heat Demand Data},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6275},
year = {2024},
url = {https://doi.org/10.21105/joss.06275},
doi = {10.21105/JOSS.06275},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/JustelS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/KatzPB24,
author = {Lee S. Katz and
John Phan and
Henk C. den Bakker},
title = {Fasten: a toolkit for streaming operations on fastq files},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {6030},
year = {2024},
url = {https://doi.org/10.21105/joss.06030},
doi = {10.21105/JOSS.06030},
timestamp = {Mon, 01 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/KatzPB24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/KavanaghSNMGZBWS24,
author = {Se{\'{a}}n R. Kavanagh and
Alexander G. Squires and
Adair Nicolson and
Irea Mosquera{-}Lois and
Alex M. Ganose and
Bonan Zhu and
Katarina Brlec and
Aron Walsh and
David O. Scanlon},
title = {doped: Python toolkit for robust and repeatable charged defect supercell
calculations},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6433},
year = {2024},
url = {https://doi.org/10.21105/joss.06433},
doi = {10.21105/JOSS.06433},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/KavanaghSNMGZBWS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/KhoshnevisRB24,
author = {Naeem Khoshnevis and
Boyu Ren and
Danielle Braun},
title = {{GPCERF} - An {R} package for implementing Gaussian processes for
estimating causal exposure response curves},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5465},
year = {2024},
url = {https://doi.org/10.21105/joss.05465},
doi = {10.21105/JOSS.05465},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/KhoshnevisRB24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Kingsbury24,
author = {Ryan Kingsbury},
title = {pyEQL: {A} Python interface for water chemistry},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6295},
year = {2024},
url = {https://doi.org/10.21105/joss.06295},
doi = {10.21105/JOSS.06295},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Kingsbury24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/KnoopSCBFVHBKKASH24,
author = {Florian Knoop and
Nina Shulumba and
Alo{\"{\i}}s Castellano and
J. P. Alvarinhas Batista and
Roberta Farris and
Matthieu J. Verstraete and
Matthew Heine and
David Broido and
Dennis S. Kim and
Johan Klarbring and
Igor A. Abrikosov and
Sergei I. Simak and
Olle Hellman},
title = {{TDEP:} Temperature Dependent Effective Potentials},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {6150},
year = {2024},
url = {https://doi.org/10.21105/joss.06150},
doi = {10.21105/JOSS.06150},
timestamp = {Mon, 01 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/KnoopSCBFVHBKKASH24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Kuno24,
author = {Akihiro Kuno},
title = {cstag and cstag-cli: tools for manipulating and visualizing cs tags},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {6066},
year = {2024},
url = {https://doi.org/10.21105/joss.06066},
doi = {10.21105/JOSS.06066},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/Kuno24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/KuricE24,
author = {Martin Kuric and
Regina Ebert},
title = {plotastic: Bridging Plotting and Statistics in Python},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6304},
year = {2024},
url = {https://doi.org/10.21105/joss.06304},
doi = {10.21105/JOSS.06304},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/KuricE24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/LacSDCLM24,
author = {{\'{E}}tienne Lac and
Guy Spiegeleer and
Adrien Delsalle and
Fr{\'{e}}d{\'{e}}ric Collonval and
Duc{-}Trung L{\^{e}} and
Mathias Malandain},
title = {CoSApp: a Python library to create, simulate and design complex systems},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6292},
year = {2024},
url = {https://doi.org/10.21105/joss.06292},
doi = {10.21105/JOSS.06292},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/LacSDCLM24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/LanghamW24,
author = {Jake Langham and
Mark J. Woodhouse},
title = {The Kestrel software for simulations of morphodynamic Earth-surface
flows},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {6079},
year = {2024},
url = {https://doi.org/10.21105/joss.06079},
doi = {10.21105/JOSS.06079},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/LanghamW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/LansdellS24,
author = {Benjamin Lansdell and
Abbas Shirinifard},
title = {Ethome: tools for machine learning of animal behavior},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5623},
year = {2024},
url = {https://doi.org/10.21105/joss.05623},
doi = {10.21105/JOSS.05623},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/LansdellS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/LavernyJ24,
author = {Oskar Laverny and
Santiago Jim{\'{e}}nez},
title = {Copulas.jl: {A} fully Distributions.jl-compliant copula package},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6189},
year = {2024},
url = {https://doi.org/10.21105/joss.06189},
doi = {10.21105/JOSS.06189},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/LavernyJ24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/LeeuwenF24,
author = {Robert van Leeuwen and
Connor Ferster},
title = {sectionproperties: {A} Python package for the analysis of arbitrary
cross-sections using the finite element method},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6105},
year = {2024},
url = {https://doi.org/10.21105/joss.06105},
doi = {10.21105/JOSS.06105},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/LeeuwenF24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/LemmenHOS24,
author = {Carsten Lemmen and
Sascha Hokamp and
Serra {\"{O}}rey and
J{\"{u}}rgen Scheffran},
title = {Viable North Sea (ViNoS): {A} NetLogo Agent-based Model of German
Small-scale Fisheries},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5731},
year = {2024},
url = {https://doi.org/10.21105/joss.05731},
doi = {10.21105/JOSS.05731},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/LemmenHOS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/LerchHostalotM24,
author = {Daniel Lerch{-}Hostalot and
David Meg{\'{\i}}as},
title = {Aletheia: an open-source toolbox for steganalysis},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5982},
year = {2024},
url = {https://doi.org/10.21105/joss.05982},
doi = {10.21105/JOSS.05982},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/LerchHostalotM24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/LiWXPSFS24,
author = {Ziheng 'Leo' Li and
Haowen 'John' Wei and
Ziwen Xie and
Yunxiang Peng and
June Pyo Suh and
Steven Feiner and
Paul Sajda},
title = {PhysioLabXR: {A} Python Platform for Real-Time, Multi-modal, Brain-Computer
Interfaces and Extended Reality Experiments},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5854},
year = {2024},
url = {https://doi.org/10.21105/joss.05854},
doi = {10.21105/JOSS.05854},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/LiWXPSFS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/LindgrenRFEOFE24,
author = {Eric Lindgren and
Magnus Rahm and
Erik Fransson and
Fredrik Eriksson and
Nicklas {\"{O}}sterbacka and
Zheyong Fan and
Paul Erhart},
title = {calorine: {A} Python package for constructing and sampling neuroevolution
potential models},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6264},
year = {2024},
url = {https://doi.org/10.21105/joss.06264},
doi = {10.21105/JOSS.06264},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/LindgrenRFEOFE24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/MalaspinaF24,
author = {David Malaspina and
Jordi Faraudo},
title = {Chitin Builder: a {VMD} tool for the generation of structures of chitin
molecular crystals for atomistic simulations},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5771},
year = {2024},
url = {https://doi.org/10.21105/joss.05771},
doi = {10.21105/JOSS.05771},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/MalaspinaF24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Male24,
author = {Frank Male},
title = {Pywaterflood: Well connectivity analysis through capacitance-resistance
modeling},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6191},
year = {2024},
url = {https://doi.org/10.21105/joss.06191},
doi = {10.21105/JOSS.06191},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Male24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Mann24,
author = {Hendrik Mann},
title = {dropout: an {R} Package for Addressing Dropouts, Missing Values, and
Sectional Challenges in Survey Data Analysis},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6181},
year = {2024},
url = {https://doi.org/10.21105/joss.06181},
doi = {10.21105/JOSS.06181},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Mann24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/MasoudGP24,
author = {Mohamed Masoud and
David A. Gutman and
Sergey M. Plis},
title = {HistoJS: Web-Based Analytical Tool for Advancing Multiplexed Images},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {6317},
year = {2024},
url = {https://doi.org/10.21105/joss.06317},
doi = {10.21105/JOSS.06317},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/MasoudGP24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/MayrD24,
author = {Matthias Mayr and
Julian M. Salt Ducaju},
title = {A {C++} Implementation of a Cartesian Impedance Controller for Robotic
Manipulators},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {5194},
year = {2024},
url = {https://doi.org/10.21105/joss.05194},
doi = {10.21105/JOSS.05194},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/MayrD24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/McIntoshCSPF24,
author = {J. McIntosh and
Qian Cao and
Berkman Sahiner and
Nicholas Petrick and
Mohammad Mehdi Farhangi},
title = {DICaugment: {A} Python Package for 3D Medical Imaging Augmentation},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6120},
year = {2024},
url = {https://doi.org/10.21105/joss.06120},
doi = {10.21105/JOSS.06120},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/McIntoshCSPF24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/McKennaKGM24,
author = {David J. McKenna and
Evan F. Keane and
Peter T. Gallagher and
Joe McCauley},
title = {udpPacketManager: An International {LOFAR} Station Data (Pre-)Processor},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5517},
year = {2024},
url = {https://doi.org/10.21105/joss.05517},
doi = {10.21105/JOSS.05517},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/McKennaKGM24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Mohammadi24,
author = {Sadegh Mohammadi},
title = {Pyheartlib: {A} Python package for processing electrocardiogram signals},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5792},
year = {2024},
url = {https://doi.org/10.21105/joss.05792},
doi = {10.21105/JOSS.05792},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Mohammadi24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/MorganVPCCMGSNPLWMPCAKPN24,
author = {Joanna Piper Morgan and
Ilham Variansyah and
Samuel L. Pasmann and
Kayla B. Clements and
Braxton Cuneo and
Alexander Mote and
Charles Goodman and
Caleb Shaw and
Jordan Northrop and
Rohan Pankaj and
Ethan Lame and
Benjamin Whewell and
Ryan G. McClarren and
Todd S. Palmer and
Lizhong Chen and
Dmitriy Y. Anistratov and
C. T. Kelley and
Camille J. Palmer and
Kyle E. Niemeyer},
title = {Monte Carlo / Dynamic Code {(MC/DC):} An accelerated Python package
for fully transient neutron transport and rapid methods development},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6415},
year = {2024},
url = {https://doi.org/10.21105/joss.06415},
doi = {10.21105/JOSS.06415},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/MorganVPCCMGSNPLWMPCAKPN24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Moss24,
author = {Robert Moss},
title = {pypfilt: a particle filter for Python},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6276},
year = {2024},
url = {https://doi.org/10.21105/joss.06276},
doi = {10.21105/JOSS.06276},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Moss24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Muller24,
author = {Julian M{\"{u}}ller},
title = {netroles: {A} Java library for role equivalence analysis in networks},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5903},
year = {2024},
url = {https://doi.org/10.21105/joss.05903},
doi = {10.21105/JOSS.05903},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/Muller24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/MurrayBWW24,
author = {Kevin D. Murray and
Justin O. Borevitz and
Detlef Weigel and
Norman Warthmann},
title = {Acanthophis: a comprehensive plant hologenomics pipeline},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6062},
year = {2024},
url = {https://doi.org/10.21105/joss.06062},
doi = {10.21105/JOSS.06062},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/MurrayBWW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Musoke24,
author = {Nathan Musoke},
title = {UltraDark.jl: {A} Julia package for simulation of cosmological scalar
fields},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6035},
year = {2024},
url = {https://doi.org/10.21105/joss.06035},
doi = {10.21105/JOSS.06035},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Musoke24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/NaikUEJG24,
author = {Aakash Ashok Naik and
Katharina Ueltzen and
Christina Ertural and
Adam J. Jackson and
Janine George},
title = {LobsterPy: {A} package to automatically analyze {LOBSTER} runs},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6286},
year = {2024},
url = {https://doi.org/10.21105/joss.06286},
doi = {10.21105/JOSS.06286},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/NaikUEJG24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/NarvaizLRFMWX24,
author = {Sarah Narvaiz and
Qinyun Lin and
Joshua M. Rosenberg and
Kenneth A. Frank and
Spiro J. Maroulis and
Wei Wang and
Ran Xu},
title = {konfound: An {R} Sensitivity Analysis Package to Quantify the Robustness
of Causal Inferences},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5779},
year = {2024},
url = {https://doi.org/10.21105/joss.05779},
doi = {10.21105/JOSS.05779},
timestamp = {Mon, 29 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/NarvaizLRFMWX24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/NasedkinMB24,
author = {Evert Nasedkin and
Paul Molli{\`{e}}re and
Doriann Blain},
title = {Atmospheric Retrievals with petitRADTRANS},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5875},
year = {2024},
url = {https://doi.org/10.21105/joss.05875},
doi = {10.21105/JOSS.05875},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/NasedkinMB24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/NelsonAS24,
author = {Reed Nelson and
Rosa Aghdam and
Claudia R. Sol{\'{\i}}s{-}Lemus},
title = {MiNAA: Microbiome Network Alignment Algorithm},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5448},
year = {2024},
url = {https://doi.org/10.21105/joss.05448},
doi = {10.21105/JOSS.05448},
timestamp = {Mon, 29 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/NelsonAS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/NittaI24,
author = {Joel H. Nitta and
Wataru Iwasaki},
title = {dwctaxon, an {R} package for editing and validating taxonomic data
in Darwin Core format},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {6215},
year = {2024},
url = {https://doi.org/10.21105/joss.06215},
doi = {10.21105/JOSS.06215},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/NittaI24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/ObenauerSBS24,
author = {Moritz L. Obenauer and
Kai N. Spauszus and
Pol Besenius and
Friederike Schmid},
title = {Project {RACCOON:} Automated construction of {PDB} files for polymers
and polymer peptide conjugates},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6293},
year = {2024},
url = {https://doi.org/10.21105/joss.06293},
doi = {10.21105/JOSS.06293},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/ObenauerSBS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/OtisSBM24,
author = {Jessica Otis and
James Safley and
Megan Brett and
Lincoln Mullen},
title = {DataScribe: An Omeka {S} module for structured data transcription},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {5661},
year = {2024},
url = {https://doi.org/10.21105/joss.05661},
doi = {10.21105/JOSS.05661},
timestamp = {Fri, 26 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/OtisSBM24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/OttinoPTP24,
author = {Gabriele Ottino and
Daniele Panico and
Daniele Tomatis and
Pierre{-}Alexandre Pantel},
title = {lbh15: a Python package for standard use and implementation of physical
data of heavy liquid metals used in nuclear reactors},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6383},
year = {2024},
url = {https://doi.org/10.21105/joss.06383},
doi = {10.21105/JOSS.06383},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/OttinoPTP24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/PanKSKB24,
author = {Shaowu Pan and
Eurika Kaiser and
Brian M. de Silva and
J. Nathan Kutz and
Steven L. Brunton},
title = {PyKoopman: {A} Python Package for Data-Driven Approximation of the
Koopman Operator},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5881},
year = {2024},
url = {https://doi.org/10.21105/joss.05881},
doi = {10.21105/JOSS.05881},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/PanKSKB24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/PasqualeDR24,
author = {Nicodemo Di Pasquale and
Ruslan L. Davidchack and
Lorenzo Rovigatti},
title = {{CLEAVING:} a {LAMMPS} package to compute surface free energies},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5886},
year = {2024},
url = {https://doi.org/10.21105/joss.05886},
doi = {10.21105/JOSS.05886},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/PasqualeDR24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/PatelHPGBKDPNJDR24,
author = {Bhavin S. Patel and
Peter Hill and
Liam Pattinson and
Maurizio Giacomin and
Arkaprava Bokshi and
Daniel Kennedy and
Harry G. Dudding and
Jason. F. Parisi and
Tom F. Neiser and
Ajay C. Jayalekshmi and
David Dickinson and
Juan Ruiz Ruiz},
title = {Pyrokinetics - {A} Python library to standardise gyrokinetic analysis},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5866},
year = {2024},
url = {https://doi.org/10.21105/joss.05866},
doi = {10.21105/JOSS.05866},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/PatelHPGBKDPNJDR24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Plum24,
author = {Fabian Plum},
title = {OmniTrax: {A} deep learning-driven multi-animal tracking and pose-estimation
add-on for Blender},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5549},
year = {2024},
url = {https://doi.org/10.21105/joss.05549},
doi = {10.21105/JOSS.05549},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Plum24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/PrachasereeMDL24,
author = {Peerasait Prachaseree and
Saeed Mohammadzadeh and
Berkin Dortdivanlioglu and
Emma Lejeune},
title = {FEniCS-arclength: {A} numerical continuation package in FEniCS for
nonlinear problems in solid mechanics},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5727},
year = {2024},
url = {https://doi.org/10.21105/joss.05727},
doi = {10.21105/JOSS.05727},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/PrachasereeMDL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/PraggastisAABJPSY24,
author = {Brenda Praggastis and
Sinan Aksoy and
Dustin Arendt and
Mark Bonicillo and
Cliff A. Joslyn and
Emilie Purvine and
Madelyn Shapiro and
Ji Young Yun},
title = {HyperNetX: {A} Python package for modeling complex network data as
hypergraphs},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6016},
year = {2024},
url = {https://doi.org/10.21105/joss.06016},
doi = {10.21105/JOSS.06016},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/PraggastisAABJPSY24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/PupZTMA24,
author = {Federico Del Pup and
Andrea Zanola and
Louis Fabrice Tshimanga and
Paolo Emilio Mazzon and
Manfredo Atzori},
title = {SelfEEG: {A} Python library for Self-Supervised Learning in Electroencephalography},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6224},
year = {2024},
url = {https://doi.org/10.21105/joss.06224},
doi = {10.21105/JOSS.06224},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/PupZTMA24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Quemere24,
author = {Patrick Qu{\'{e}}m{\'{e}}r{\'{e}}},
title = {Fitspy: {A} Python package for spectral decomposition},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5868},
year = {2024},
url = {https://doi.org/10.21105/joss.05868},
doi = {10.21105/JOSS.05868},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Quemere24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/RaanesCG24,
author = {Patrick N. Raanes and
Yumeng Chen and
Colin Grudzien},
title = {{DAPPER:} Data Assimilation with Python: a Package for Experimental
Research},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5150},
year = {2024},
url = {https://doi.org/10.21105/joss.05150},
doi = {10.21105/JOSS.05150},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/RaanesCG24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/RahaRFN24,
author = {Ritam Raha and
Rajarshi Roy and
Nathana{\"{e}}l Fijalkow and
Daniel Neider},
title = {Scarlet: Scalable Anytime Algorithms for Learning Fragments of Linear
Temporal Logic},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {5052},
year = {2024},
url = {https://doi.org/10.21105/joss.05052},
doi = {10.21105/JOSS.05052},
timestamp = {Fri, 26 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/RahaRFN24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/RamavarapuAPPLWC24,
author = {Vikram Ramavarapu and
Fabio Jose Ayres and
Minhyuk Park and
Vidya Kamath Pailodi and
Jo{\~{a}}o Alfredo Cardoso Lamy and
Tandy J. Warnow and
George Chacko},
title = {{CM++} - {A} Meta-method for Well-Connected Community Detection},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {6073},
year = {2024},
url = {https://doi.org/10.21105/joss.06073},
doi = {10.21105/JOSS.06073},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/RamavarapuAPPLWC24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/RavasiOLLU24,
author = {Matteo Ravasi and
Marcus Valtonen {\"{O}}rnhag and
Nick Luiken and
Olivier Leblanc and
Eneko Uru{\~{n}}uela},
title = {PyProximal - scalable convex optimization in Python},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6326},
year = {2024},
url = {https://doi.org/10.21105/joss.06326},
doi = {10.21105/JOSS.06326},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/RavasiOLLU24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/RedaVW24,
author = {Cl{\'{e}}mence R{\'{e}}da and
Jill{-}J{\^{e}}nn Vie and
Olaf Wolkenhauer},
title = {stanscofi and benchscofi: a new standard for drug repurposing by collaborative
filtering},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5973},
year = {2024},
url = {https://doi.org/10.21105/joss.05973},
doi = {10.21105/JOSS.05973},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/RedaVW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/RenziniRTLKTBMMTJDMCLD24,
author = {Arianna I. Renzini and
Alba Romero{-}Rodriguez and
Colm Talbot and
Max Lalleman and
Shivaraj Kandhasamy and
Kevin Turbang and
Sylvia Biscoveanu and
Katarina Martinovic and
Patrick M. Meyers and
Leo Tsukada and
Kamiel Janssens and
Derek Davis and
Andrew Matas and
Philip Charlton and
Guo{-}chin Liu and
Irina Dvorkin},
title = {pygwb: a Python-based library for gravitational-wave background searches},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5454},
year = {2024},
url = {https://doi.org/10.21105/joss.05454},
doi = {10.21105/JOSS.05454},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/RenziniRTLKTBMMTJDMCLD24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/RheaultCL24,
author = {Karelle Rheault and
Jesper R. Christiansen and
Klaus Steenberg Larsen},
title = {goFlux: {A} user-friendly way to calculate {GHG} fluxes yourself,
regardless of user experience},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6393},
year = {2024},
url = {https://doi.org/10.21105/joss.06393},
doi = {10.21105/JOSS.06393},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/RheaultCL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/RichartAGFKPVRCMBZFDM24,
author = {Nicolas Richart and
Guillaume Anciaux and
Emil R. Gallyamov and
Lucas Fr{\'{e}}rot and
David S. Kammer and
Mohit Pundir and
Marco Vocialta and
Aurelia Isabel Cuba Ramos and
Mauro Corrado and
Philip M{\"{u}}ller and
Fabian Barras and
Shenghan Zhang and
Roxane Ferry and
Shad Durussel and
Jean{-}Fran{\c{c}}ois Molinari},
title = {Akantu: an {HPC} finite-element library for contact and dynamic fracture
simulations},
journal = {J. Open Source Softw.},
volume = {9},
number = {95},
pages = {5253},
year = {2024},
url = {https://doi.org/10.21105/joss.05253},
doi = {10.21105/JOSS.05253},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/RichartAGFKPVRCMBZFDM24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/RiegerL24,
author = {Niclas Rieger and
Samuel J. Levang},
title = {xeofs: Comprehensive {EOF} analysis in Python with xarray},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {6060},
year = {2024},
url = {https://doi.org/10.21105/joss.06060},
doi = {10.21105/JOSS.06060},
timestamp = {Fri, 26 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/RiegerL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/RoachHBPIGMBE24,
author = {Michael J. Roach and
Bradley J. Hart and
Sarah J. Beecroft and
Bhavya Nalagampalli Papudeshi and
Laura K. Inglis and
Susanna R. Grigson and
Vijini Mallawaarachchi and
George Bouras and
Robert A. Edwards},
title = {Koverage: Read-coverage analysis for massive (meta)genomics datasets},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6235},
year = {2024},
url = {https://doi.org/10.21105/joss.06235},
doi = {10.21105/JOSS.06235},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/RoachHBPIGMBE24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/RodesBachsSHVCZZK24,
author = {Cl{\`{a}}udia Rod{\'{e}}s{-}Bachs and
Jon Sampedro and
Russell Horowitz and
Dirk{-}Jan Van de Ven and
Ryna Yiyun Cui and
Alicia Zhao and
Matthew Zwerling and
Zarrar Khan},
title = {gcamreport: An {R} tool to process and standardize {GCAM} outputs},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5975},
year = {2024},
url = {https://doi.org/10.21105/joss.05975},
doi = {10.21105/JOSS.05975},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/RodesBachsSHVCZZK24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/RosenGGRSSWEPWRPJG24,
author = {Andrew S. Rosen and
Max Gallant and
Janine George and
Janosh Riebesell and
Hrushikesh Sahasrabuddhe and
Jimmy{-}Xuan Shen and
Mingjian Wen and
Matthew L. Evans and
Guido Petretto and
David Waroquiers and
Gian{-}Marco Rignanese and
Kristin A. Persson and
Anubhav Jain and
Alex M. Ganose},
title = {Jobflow: Computational Workflows Made Simple},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {5995},
year = {2024},
url = {https://doi.org/10.21105/joss.05995},
doi = {10.21105/JOSS.05995},
timestamp = {Sun, 18 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/RosenGGRSSWEPWRPJG24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/San24,
author = {Metin San},
title = {ZodiPy: {A} Python package for zodiacal light simulations},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6648},
year = {2024},
url = {https://doi.org/10.21105/joss.06648},
doi = {10.21105/JOSS.06648},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/San24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/SchmidtSWWSDTABKWLJSKFVMFB24,
author = {K. J. Schmidt and
Aristana Scourtas and
Logan T. Ward and
Steve Wangen and
Marcus Schwarting and
Isaac Darling and
Ethan Truelove and
Aadit Ambadkar and
Ribhav Bose and
Zoa Katok and
Jingrui Wei and
Xiangguo Li and
Ryan Jacobs and
Lane Schultz and
Doyeon Kim and
Michael C. Ferris and
Paul M. Voyles and
Dane Morgan and
Ian T. Foster and
Ben Blaiszik},
title = {Foundry-ML - Software and Services to Simplify Access to Machine Learning
Datasets in Materials Science},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {5467},
year = {2024},
url = {https://doi.org/10.21105/joss.05467},
doi = {10.21105/JOSS.05467},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/SchmidtSWWSDTABKWLJSKFVMFB24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/ShenV24,
author = {Jimmy{-}Xuan Shen and
Joel Varley},
title = {pymatgen-analysis-defects: {A} Python package for analyzing point
defects in crystalline materials},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5941},
year = {2024},
url = {https://doi.org/10.21105/joss.05941},
doi = {10.21105/JOSS.05941},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/ShenV24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/ShoneCPKF24,
author = {Fred Shone and
Theodore Chatziioannou and
Bryn Pickering and
Kasia Kozlowska and
Michael Fitzmaurice},
title = {{PAM:} Population Activity Modeller},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6097},
year = {2024},
url = {https://doi.org/10.21105/joss.06097},
doi = {10.21105/JOSS.06097},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/ShoneCPKF24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/SinghA24,
author = {Gurjeet Sangra Singh and
Luigi Acerbi},
title = {PyBADS: Fast and robust black-box optimization in Python},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5694},
year = {2024},
url = {https://doi.org/10.21105/joss.05694},
doi = {10.21105/JOSS.05694},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/SinghA24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/SinhaR24,
author = {Harsh Sinha and
Pradeep Reddy Raamana},
title = {MRdataset : {A} unified and user-friendly interface to medical imaging
datasets},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6269},
year = {2024},
url = {https://doi.org/10.21105/joss.06269},
doi = {10.21105/JOSS.06269},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/SinhaR24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/SongWJI24,
author = {Shuang Song and
Shuai Wang and
Chentai Jiao and
El{\'{\i}}as Jos{\'{e}} Mantilla Ibarra},
title = {ABSESpy: An agent-based modeling framework for social-ecological systems},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6298},
year = {2024},
url = {https://doi.org/10.21105/joss.06298},
doi = {10.21105/JOSS.06298},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/SongWJI24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/SperottoRM24,
author = {Pietro Sperotto and
M. Ratz and
Miguel A. Mendez},
title = {{SPICY:} a Python toolbox for meshless assimilation from image velocimetry
using radial basis functions},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5749},
year = {2024},
url = {https://doi.org/10.21105/joss.05749},
doi = {10.21105/JOSS.05749},
timestamp = {Mon, 25 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/SperottoRM24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/SpinelliK24,
author = {Andrea Spinelli and
Timoleon Kipouros},
title = {{PDOPT:} {A} Python library for Probabilistic Design space exploration
and OPTimisation},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6110},
year = {2024},
url = {https://doi.org/10.21105/joss.06110},
doi = {10.21105/JOSS.06110},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/SpinelliK24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/SteerABLYJMKRCCACCBZPA24,
author = {Benjamin A. Steer and
Naomi A. Arnold and
Cheick Tidiane Ba and
Renaud Lambiotte and
Haaroon Yousaf and
Lucas Jeub and
Fabian Murariu and
Shivam Kapoor and
Pedro Rico and
Rachel Chan and
Louis Chan and
James Alford and
Richard G. Clegg and
F{\'{e}}lix Cuadrado and
Matthew Russell Barnes and
Peijie Zhong and
John Pougu{\'{e}}{-}Biyong and
Alhamza Alnaimi},
title = {Raphtory: The temporal graph engine for Rust and Python},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5940},
year = {2024},
url = {https://doi.org/10.21105/joss.05940},
doi = {10.21105/JOSS.05940},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/SteerABLYJMKRCCACCBZPA24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/StenioM24,
author = {Kleydson Stenio and
D{\'{e}}bora Marcondes Bastos Pereira Milori},
title = {LIBSsa: an open source software for analyzing {LIBS} spectra},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5961},
year = {2024},
url = {https://doi.org/10.21105/joss.05961},
doi = {10.21105/JOSS.05961},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/StenioM24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/SulkowskiBS24,
author = {Aleksander Sulkowski and
Cl{\'{e}}ment Bouton and
Chad Swanson},
title = {Syn-CpG-Spacer: {A} Panel web app for synonymous recoding of viral
genomes with CpG dinucleotides},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6332},
year = {2024},
url = {https://doi.org/10.21105/joss.06332},
doi = {10.21105/JOSS.06332},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/SulkowskiBS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Tagusari24,
author = {Junta Tagusari},
title = {{H-RISK} with NoiseModelling: a {QGIS} plugin to predict environmental
noise and estimate health risks},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {6023},
year = {2024},
url = {https://doi.org/10.21105/joss.06023},
doi = {10.21105/JOSS.06023},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/Tagusari24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/TejedorSSVBDPRE24,
author = {Andres R. Tejedor and
Ignacio Sanchez{-}Burgos and
Eduardo Sanz and
Carlos Vega and
Felipe J. Blas and
Ruslan L. Davidchack and
Nicodemo Di Pasquale and
Jorge Ramirez and
Jorge R. Espinosa},
title = {Mold: a {LAMMPS} package to compute interfacial free energies and
nucleation rates},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6083},
year = {2024},
url = {https://doi.org/10.21105/joss.06083},
doi = {10.21105/JOSS.06083},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/TejedorSSVBDPRE24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Theler24,
author = {Jeremy Theler},
title = {FeenoX: a cloud-first finite-element(ish) computational engineering
tool},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5846},
year = {2024},
url = {https://doi.org/10.21105/joss.05846},
doi = {10.21105/JOSS.05846},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Theler24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Thieu24,
author = {Nguyen Van Thieu},
title = {PerMetrics: {A} Framework of Performance Metrics for Machine Learning
Models},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6143},
year = {2024},
url = {https://doi.org/10.21105/joss.06143},
doi = {10.21105/JOSS.06143},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Thieu24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/TimonerHBFR24,
author = {Pablo Timoner and
Fleur Hierink and
Lo{\"{\i}}c Baecher and
Caroline Fuhrer and
Nicolas Ray},
title = {inAccessMod: An {R} package to automate data downloading and processing
for AccessMod},
journal = {J. Open Source Softw.},
volume = {9},
number = {93},
pages = {5879},
year = {2024},
url = {https://doi.org/10.21105/joss.05879},
doi = {10.21105/JOSS.05879},
timestamp = {Fri, 26 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/TimonerHBFR24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/TinoASAA24,
author = {Matthew Peres Tino and
Abbas Yusuf Abdulaziz and
Robert Suderman and
Thomas Akdeniz and
Nasser Mohieddin Abukhdeir},
title = {Shapelets: {A} Python package implementing shapelet functions and
their applications},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6058},
year = {2024},
url = {https://doi.org/10.21105/joss.06058},
doi = {10.21105/JOSS.06058},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/TinoASAA24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Townsend24,
author = {Adam K. Townsend},
title = {Stokesian Dynamics in Python},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6011},
year = {2024},
url = {https://doi.org/10.21105/joss.06011},
doi = {10.21105/JOSS.06011},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Townsend24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/UbaldiYJKFCUS24,
author = {Enrico Ubaldi and
Takahiro Yabe and
Nicholas K. W. Jones and
Maham Faisal Khan and
Alessandra Feliciotti and
Riccardo Di Clemente and
Satish V. Ukkusuri and
Emanuele Strano},
title = {Mobilkit: {A} Python Toolkit for Urban Resilience and Disaster Risk
Management Analytics},
journal = {J. Open Source Softw.},
volume = {9},
number = {95},
pages = {5201},
year = {2024},
url = {https://doi.org/10.21105/joss.05201},
doi = {10.21105/JOSS.05201},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/UbaldiYJKFCUS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/UriaAlvarezP24,
author = {Alejandro Jos{\'{e}} Ur{\'{\i}}a{-}{\'{A}}lvarez and
Juan Jos{\'{e}} Palacios},
title = {tightbinder: {A} Python package for semi-empirical tight-binding models
of crystalline and disordered solids},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5810},
year = {2024},
url = {https://doi.org/10.21105/joss.05810},
doi = {10.21105/JOSS.05810},
timestamp = {Mon, 01 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/UriaAlvarezP24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/UstalovPT24,
author = {Dmitry Ustalov and
Nikita Pavlichenko and
Boris Tseitlin},
title = {Learning from Crowds with Crowd-Kit},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6227},
year = {2024},
url = {https://doi.org/10.21105/joss.06227},
doi = {10.21105/JOSS.06227},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/UstalovPT24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/VergauwenVCJTDVHC24,
author = {Thomas Vergauwen and
Michiel Vieijra and
Andrei Covaci and
Amber Jacobs and
Sara Top and
Wout Dewettinck and
Kobe Vandelanotte and
Ian Hellebosch and
Steven Caluwaerts},
title = {MetObs - a Python toolkit for using non-traditional meteorological
observations},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5916},
year = {2024},
url = {https://doi.org/10.21105/joss.05916},
doi = {10.21105/JOSS.05916},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/VergauwenVCJTDVHC24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/VughtHB24,
author = {Luc van Vught and
Corn{\'{e}} Haasjes and
Jan{-}Willem M. Beenakker},
title = {ZOSPy: optical ray tracing in Python through OpticStudio},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {5756},
year = {2024},
url = {https://doi.org/10.21105/joss.05756},
doi = {10.21105/JOSS.05756},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/VughtHB24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/WalkerRW24,
author = {Pierre J. Walker and
Andr{\'{e}}s Riedemann and
Zhen{-}Gang Wang},
title = {GCIdentifier.jl: {A} Julia package for identifying molecular fragments
from {SMILES}},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6453},
year = {2024},
url = {https://doi.org/10.21105/joss.06453},
doi = {10.21105/JOSS.06453},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/WalkerRW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/WangCLLHS24,
author = {Yu Wang and
Emma R. Cobian and
Jubilee Lee and
Fang Liu and
Jonathan D. Hauenstein and
Daniele E. Schiavazzi},
title = {{LINFA:} a Python library for variational inference with normalizing
flow and annealing},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6309},
year = {2024},
url = {https://doi.org/10.21105/joss.06309},
doi = {10.21105/JOSS.06309},
timestamp = {Mon, 29 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/WangCLLHS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/WeinerRSSP24,
author = {Max Weiner and
Christoph Renzing and
Max Stirl and
Matthias Schmidtchen and
Ulrich Prahl},
title = {PyRolL - An Extensible OpenSource Framework for Rolling Simulation},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {6200},
year = {2024},
url = {https://doi.org/10.21105/joss.06200},
doi = {10.21105/JOSS.06200},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/WeinerRSSP24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/WeinrebOJD24,
author = {Caleb Weinreb and
Mohammed Abdal Monium Osman and
Maya Jay and
Sandeep R. Datta},
title = {Systems Neuro Browser {(SNUB)}},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6187},
year = {2024},
url = {https://doi.org/10.21105/joss.06187},
doi = {10.21105/JOSS.06187},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/WeinrebOJD24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/WisamB24,
author = {Essam Wisam and
Anthony D. Blaom},
title = {Imbalance: {A} comprehensive multi-interface Julia toolbox to address
class imbalance},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6310},
year = {2024},
url = {https://doi.org/10.21105/joss.06310},
doi = {10.21105/JOSS.06310},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/WisamB24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Zerrouki24,
author = {Taha Zerrouki},
title = {Tashaphyne: {A} Python package for Arabic Light Stemming},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {6063},
year = {2024},
url = {https://doi.org/10.21105/joss.06063},
doi = {10.21105/JOSS.06063},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/Zerrouki24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/Zhang24,
author = {He Zhang},
title = {cppTPSA/pyTPSA: a C++/Python package for truncated power series algebra},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {4818},
year = {2024},
url = {https://doi.org/10.21105/joss.04818},
doi = {10.21105/JOSS.04818},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/Zhang24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/ZhaoCPWCNV24,
author = {Xin Zhao and
Maksym Chepeliev and
Pralit Patel and
Marshall Wise and
Katherine Calvin and
Kanishka Narayan and
Chris R. Vernon},
title = {gcamfaostat: An {R} package to prepare, process, and synthesize {FAOSTAT}
data for global agroeconomic and multisector dynamic modeling},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6388},
year = {2024},
url = {https://doi.org/10.21105/joss.06388},
doi = {10.21105/JOSS.06388},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/ZhaoCPWCNV24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/ZhaoKDV24,
author = {Mengqi Zhao and
Zarrar Khan and
Kalyn Dorheim and
Chris R. Vernon},
title = {helios: An {R} package to process heating and cooling degrees for
{GCAM}},
journal = {J. Open Source Softw.},
volume = {9},
number = {96},
pages = {6033},
year = {2024},
url = {https://doi.org/10.21105/joss.06033},
doi = {10.21105/JOSS.06033},
timestamp = {Sat, 04 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jossw/ZhaoKDV24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/ZhuKS24,
author = {Bonan Zhu and
Se{\'{a}}n R. Kavanagh and
David O. Scanlon},
title = {easyunfold: {A} Python package for unfolding electronic band structures},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5974},
year = {2024},
url = {https://doi.org/10.21105/joss.05974},
doi = {10.21105/JOSS.05974},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/ZhuKS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jossw/ZimmermannNM24,
author = {Coy J. Zimmermann and
Keith B. Neeves and
David W. M. Marr},
title = {MicroTracker.jl: {A} Julia package for microbot research},
journal = {J. Open Source Softw.},
volume = {9},
number = {94},
pages = {5804},
year = {2024},
url = {https://doi.org/10.21105/joss.05804},
doi = {10.21105/JOSS.05804},
timestamp = {Sun, 18 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jossw/ZimmermannNM24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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