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2020 – today
- 2022
[j11]Soohyun Lee, Clara R. Bakker
, Carl Vitzthum, Burak Han Alver, Peter J. Park:
Pairs and Pairix: a file format and a tool for efficient storage and retrieval for Hi-C read pairs. Bioinform. 38(6): 1729-1731 (2022)- [j10]Changgwon Dang, Taejeong Choi, Seungsoo Lee, Soohyun Lee, Mahboob Alam, Sangmin Lee, Seungkyu Han, Duy-Tang Hoang, Jaegu Lee, Duc Toan Nguyen:
Case Study: Improving the Quality of Dairy Cow Reconstruction with a Deep Learning-Based Framework. Sensors 22(23): 9325 (2022) - [c3]Sebeom Park, Soohyun Lee, Youngtaek Kim, Hyeon Jeon, Seokweon Jung, Jinwook Bok, Jinwook Seo:
VANT: A Visual Analytics System for Refining Parallel Corpora in Neural Machine Translation. PacificVis 2022: 181-185 - [i3]Hyeon Jeon, Michaël J. Aupetit, Soohyun Lee, Hyung-Kwon Ko, Youngtaek Kim, Jinwook Seo:
Distortion-Aware Brushing for Interactive Cluster Analysis in Multidimensional Projections. CoRR abs/2201.06379 (2022) - [i2]Hyeon Jeon, Hyung-Kwon Ko, Soohyun Lee, Jaemin Jo, Jinwook Seo:
Uniform Manifold Approximation with Two-phase Optimization. CoRR abs/2205.00420 (2022) - 2021
- [j9]Minseok Kwon, Soohyun Lee, Michele Berselli, Chong Chu, Peter J. Park:
BamSnap: a lightweight viewer for sequencing reads in BAM files. Bioinform. 37(2): 263-264 (2021) - [j8]Dhawal Jain, Chong Chu, Burak Han Alver, Soohyun Lee, Eunjung Alice Lee, Peter J. Park:
HiTea: a computational pipeline to identify non-reference transposable element insertions in Hi-C data. Bioinform. 37(8): 1045-1051 (2021) - [i1]Felix Mölder, Kim Philipp Jablonski, Brice Letcher, Michael B. Hall, Christopher Tomkins-Tinch, Vanessa V. Sochat, Jan Forster, Soohyun Lee, Sven Twardziok, Alexander Kanitz, Andreas Wilm, Manuel Holtgrewe, Sven Rahmann, Sven Nahnsen, Johannes Köster:
Sustainable data analysis with Snakemake. F1000Research 10: 33 (2021)
2010 – 2019
- 2019
- [j7]Soohyun Lee, Jeremy Johnson, Carl Vitzthum, Koray Kirli, Burak Han Alver, Peter J. Park:
Tibanna: software for scalable execution of portable pipelines on the cloud. Bioinform. 35(21): 4424-4426 (2019) - 2015
- [j6]Soohyun Lee, Chae Hwa Seo, Burak Han Alver, Sanghyuk Lee, Peter J. Park:
EMSAR: estimation of transcript abundance from RNA-seq data by mappability-based segmentation and reclustering. BMC Bioinform. 16: 278:1-278:16 (2015) - [c2]Joongki Park, Soohyun Lee, Min Sung Yoon, Jaehan Kim, Hyon-Gon Choo, Jinwoong Kim, Taegeun Kim:
An optical reconstruction of hologram recorded by OSH using amplitude-only SLM and phase-only SLM. 3DTV-Conference 2015: 1-3 - 2014
- [j5]Joshua Wing Kei Ho, Youngsook L. Jung, Tao Liu, Burak Han Alver, Soohyun Lee, Kohta Ikegami, Kyung-Ah Sohn, Aki Minoda, Michael Y. Tolstorukov, Alex Appert, Stephen C. J. Parker, Tingting Gu, Anshul Kundaje, Nicole C. Riddle, Eric Bishop, Thea A. Egelhofer, Sheng'en Shawn Hu, Artyom A. Alekseyenko, Andreas Rechtsteiner, Dalal Asker, Jason A. Belsky, Sarah K. Bowman, Q. Brent Chen, Ron A.-J. Chen, Daniel S. Day, Yan Dong, Andrea C. Dose, Xikun Duan, Charles B. Epstein, Sevinc Ercan, Elise A. Feingold, Francesco Ferrari, Jacob M. Garrigues, Nils Gehlenborg, Peter J. Good, Psalm Haseley, Daniel He, Moritz Herrmann, Michael M. Hoffman, Tess E. Jeffers, Peter V. Kharchenko, Paulina Kolasinska-Zwierz, Chitra V. Kotwaliwale, Nischay Kumar, Sasha A. Langley, Erica Larschan, Isabel Latorre, Maxwell W. Libbrecht, Xueqiu Lin, Richard Park, Michael J. Pazin, Hoang N. Pham, Annette Plachetka, Bo Qin, Yuri B. Schwartz, Noam Shoresh, Przemyslaw Stempor, Anne Vielle, Chengyang Wang, Christina M. Whittle, Huiling Xue, Robert E. Kingston, Ju Han Kim, Bradley E. Bernstein, Abby F. Dernburg, Vincenzo Pirrotta, Mitzi I. Kuroda, William S. Noble, Thomas D. Tullius, Manolis Kellis, David M. MacAlpine, Susan Strome, Sarah C. R. Elgin, Xiaole Shirley Liu, Jason D. Lieb, Julie Ahringer, Gary H. Karpen, Peter J. Park:
Comparative analysis of metazoan chromatin organization Open. Nat. 512(7515): 449-452 (2014) - 2012
- [j4]Hyesook Lim, Soohyun Lee, Earl E. Swartzlander Jr.:
A new hierarchical packet classification algorithm. Comput. Networks 56(13): 3010-3022 (2012) - 2011
- [j3]Soohyun Lee, Chae Hwa Seo, Byungho Lim, Jin Ok Yang, Jeongsu Oh, Minjin Kim, Sooncheol Lee, Byungwook Lee, Changwon Kang, Sanghyuk Lee:
Accurate quantification of transcriptome from RNA-Seq data by effective length normalization. Nucleic Acids Res. 39(2): 9 (2011) - [c1]Susan B. Davidson, Soohyun Lee, Julia Stoyanovich:
Keyword Search in Workflow Repositories with Access Control. AMW 2011
2000 – 2009
- 2007
- [j2]Sung Ho Yoon, Young-Kyu Park, Soohyun Lee, Doil Choi, Tae Kwang Oh, Cheol-Goo Hur, Jihyun F. Kim:
Towards pathogenomics: a web-based resource for pathogenicity islands. Nucleic Acids Res. 35(Database-Issue): 395-400 (2007) - 2004
- [j1]Soohyun Lee, Changwon Kang:
CHOISS for selection of single nucleotide polymorphism markers on interval regularity. Bioinform. 20(4): 581-582 (2004)
Coauthor Index
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