BibTeX records: Mohd Firdaus Raih

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@article{DBLP:journals/bmcbi/Mat-SharaniR19,
  author    = {Shuhaila Mat{-}Sharani and
               Mohd Firdaus Raih},
  title     = {Computational discovery and annotation of conserved small open reading
               frames in fungal genomes},
  journal   = {{BMC} Bioinform.},
  volume    = {19-S},
  number    = {13},
  pages     = {171--185},
  year      = {2019},
  url       = {https://doi.org/10.1186/s12859-018-2550-2},
  doi       = {10.1186/s12859-018-2550-2},
  timestamp = {Sat, 30 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/bmcbi/Mat-SharaniR19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/RamlanR19,
  author    = {Effirul I. Ramlan and
               Mohd Firdaus Raih},
  editor    = {Shoba Ranganathan and
               Michael Gribskov and
               Kenta Nakai and
               Christian Sch{\"{o}}nbach},
  title     = {Engineering of Supramolecular {RNA} Structures},
  booktitle = {Encyclopedia of Bioinformatics and Computational Biology - Volume
               3},
  pages     = {535--545},
  publisher = {Elsevier},
  year      = {2019},
  url       = {https://doi.org/10.1016/b978-0-12-809633-8.20442-1},
  doi       = {10.1016/b978-0-12-809633-8.20442-1},
  timestamp = {Thu, 05 Nov 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/reference/bioinf/RamlanR19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/HamdaniYR19,
  author    = {Hazrina Yusof Hamdani and
               Zatil H. Yahaya and
               Mohd Firdaus Raih},
  editor    = {Shoba Ranganathan and
               Michael Gribskov and
               Kenta Nakai and
               Christian Sch{\"{o}}nbach},
  title     = {Predicting {RNA-RNA} Interactions in Three-Dimensional Structures},
  booktitle = {Encyclopedia of Bioinformatics and Computational Biology - Volume
               3},
  pages     = {546--553},
  publisher = {Elsevier},
  year      = {2019},
  url       = {https://doi.org/10.1016/b978-0-12-809633-8.20142-8},
  doi       = {10.1016/b978-0-12-809633-8.20142-8},
  timestamp = {Thu, 05 Nov 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/reference/bioinf/HamdaniYR19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/NgR19,
  author    = {Chyan Leong Ng and
               Mohd Firdaus Raih},
  editor    = {Shoba Ranganathan and
               Michael Gribskov and
               Kenta Nakai and
               Christian Sch{\"{o}}nbach},
  title     = {Applications of Ribosomal {RNA} Sequence and Structure Analysis for
               Extracting Evolutionary and Functional Insights},
  booktitle = {Encyclopedia of Bioinformatics and Computational Biology - Volume
               3},
  pages     = {554--567},
  publisher = {Elsevier},
  year      = {2019},
  url       = {https://doi.org/10.1016/b978-0-12-809633-8.20443-3},
  doi       = {10.1016/b978-0-12-809633-8.20443-3},
  timestamp = {Thu, 05 Nov 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/reference/bioinf/NgR19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/OthmanNR19,
  author    = {Munyati Othman and
               Siuk M. Ng and
               Mohd Firdaus Raih},
  editor    = {Shoba Ranganathan and
               Michael Gribskov and
               Kenta Nakai and
               Christian Sch{\"{o}}nbach},
  title     = {Computational Design and Experimental Implementation of Synthetic
               Riboswitches and Riboregulators},
  booktitle = {Encyclopedia of Bioinformatics and Computational Biology - Volume
               3},
  pages     = {568--573},
  publisher = {Elsevier},
  year      = {2019},
  url       = {https://doi.org/10.1016/b978-0-12-809633-8.20144-1},
  doi       = {10.1016/b978-0-12-809633-8.20144-1},
  timestamp = {Thu, 05 Nov 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/reference/bioinf/OthmanNR19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/RaihG19,
  author    = {Mohd Firdaus Raih and
               Nur Syatila Abdul Ghani},
  editor    = {Shoba Ranganathan and
               Michael Gribskov and
               Kenta Nakai and
               Christian Sch{\"{o}}nbach},
  title     = {Identifying Functional Relationships Via the Annotation and Comparison
               of Three-Dimensional Amino Acid Arrangements in Protein Structures},
  booktitle = {Encyclopedia of Bioinformatics and Computational Biology - Volume
               3},
  pages     = {620--630},
  publisher = {Elsevier},
  year      = {2019},
  url       = {https://doi.org/10.1016/b978-0-12-809633-8.20149-0},
  doi       = {10.1016/b978-0-12-809633-8.20149-0},
  timestamp = {Thu, 05 Nov 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/reference/bioinf/RaihG19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/GhaniRA19,
  author    = {Nur S. A. Ghani and
               Mohd Firdaus Raih and
               Shandar Ahmad},
  editor    = {Shoba Ranganathan and
               Michael Gribskov and
               Kenta Nakai and
               Christian Sch{\"{o}}nbach},
  title     = {Computational Prediction of Nucleic Acid Binding Residues From Sequence},
  booktitle = {Encyclopedia of Bioinformatics and Computational Biology - Volume
               3},
  pages     = {678--687},
  publisher = {Elsevier},
  year      = {2019},
  url       = {https://doi.org/10.1016/b978-0-12-809633-8.20662-6},
  doi       = {10.1016/b978-0-12-809633-8.20662-6},
  timestamp = {Thu, 05 Nov 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/reference/bioinf/GhaniRA19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/Mat-SharaniQNR19,
  author    = {Shuhaila Mat{-}Sharani and
               Doris H. X. Quay and
               Chyan L. Ng and
               Mohd Firdaus Raih},
  editor    = {Shoba Ranganathan and
               Michael Gribskov and
               Kenta Nakai and
               Christian Sch{\"{o}}nbach},
  title     = {Structural Genomics},
  booktitle = {Encyclopedia of Bioinformatics and Computational Biology - Volume
               3},
  pages     = {722--728},
  publisher = {Elsevier},
  year      = {2019},
  url       = {https://doi.org/10.1016/b978-0-12-809633-8.20155-6},
  doi       = {10.1016/b978-0-12-809633-8.20155-6},
  timestamp = {Sat, 07 Nov 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/reference/bioinf/Mat-SharaniQNR19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/bioinf/SulaimanYMMR19,
  author    = {Suhaila Sulaiman and
               Nur S. Yusoff and
               Ng S. Mun and
               Haslina Makmur and
               Mohd Firdaus Raih},
  editor    = {Shoba Ranganathan and
               Michael Gribskov and
               Kenta Nakai and
               Christian Sch{\"{o}}nbach},
  title     = {Inference of Horizontal Gene Transfer: Gaining Insights Into Evolution
               via Lateral Acquisition of Genetic Material},
  booktitle = {Encyclopedia of Bioinformatics and Computational Biology - Volume
               3},
  pages     = {953--964},
  publisher = {Elsevier},
  year      = {2019},
  url       = {https://doi.org/10.1016/b978-0-12-809633-8.20173-8},
  doi       = {10.1016/b978-0-12-809633-8.20173-8},
  timestamp = {Thu, 05 Nov 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/reference/bioinf/SulaimanYMMR19.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ChanRTHRL17,
  author    = {Kuang{-}Lim Chan and
               Rozana Rosli and
               Tatiana V. Tatarinova and
               Michael Hogan and
               Mohd Firdaus Raih and
               Eng{-}Ti Leslie Low},
  title     = {Seqping: gene prediction pipeline for plant genomes using self-training
               gene models and transcriptomic data},
  journal   = {{BMC} Bioinform.},
  volume    = {18},
  number    = {{S-1}},
  pages     = {29:1--29:7},
  year      = {2017},
  url       = {https://doi.org/10.1186/s12859-016-1426-6},
  doi       = {10.1186/s12859-016-1426-6},
  timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/bmcbi/ChanRTHRL17.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/LeeRARR16,
  author    = {Yiling Lee and
               Rozieffa Roslan and
               Shariza Azizan and
               Mohd Firdaus Raih and
               Effirul I. Ramlan},
  title     = {An analysis of simple computational strategies to facilitate the design
               of functional molecular information processors},
  journal   = {{BMC} Bioinform.},
  volume    = {17},
  pages     = {438},
  year      = {2016},
  url       = {https://doi.org/10.1186/s12859-016-1297-x},
  doi       = {10.1186/s12859-016-1297-x},
  timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/bmcbi/LeeRARR16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AppasamyHRR16,
  author    = {Sri Devan Appasamy and
               Hazrina Yusof Hamdani and
               Effirul Ikhwan Ramlan and
               Mohd Firdaus Raih},
  title     = {InterRNA: a database of base interactions in {RNA} structures},
  journal   = {Nucleic Acids Res.},
  volume    = {44},
  number    = {Database-Issue},
  pages     = {266--271},
  year      = {2016},
  url       = {https://doi.org/10.1093/nar/gkv1186},
  doi       = {10.1093/nar/gkv1186},
  timestamp = {Sun, 17 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/nar/AppasamyHRR16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/candc/SallehAZR15,
  author    = {Faridah Hani Mohamed Salleh and
               Shereena Mohd Arif and
               Suhaila Zainudin and
               Mohd Firdaus Raih},
  title     = {Reconstructing gene regulatory networks from knock-out data using
               Gaussian Noise Model and Pearson Correlation Coefficient},
  journal   = {Comput. Biol. Chem.},
  volume    = {59},
  pages     = {3--14},
  year      = {2015},
  url       = {https://doi.org/10.1016/j.compbiolchem.2015.04.012},
  doi       = {10.1016/j.compbiolchem.2015.04.012},
  timestamp = {Fri, 13 Mar 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/candc/SallehAZR15.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RaihHNR0A14,
  author    = {Mohd Firdaus Raih and
               Hazrina Yusof Hamdani and
               Nurul Nadzirin and
               Effirul Ikhwan Ramlan and
               Peter Willett and
               Peter J. Artymiuk},
  title     = {{COGNAC:} a web server for searching and annotating hydrogen-bonded
               base interactions in {RNA} three-dimensional structures},
  journal   = {Nucleic Acids Res.},
  volume    = {42},
  number    = {Webserver-Issue},
  pages     = {382--388},
  year      = {2014},
  url       = {https://doi.org/10.1093/nar/gku438},
  doi       = {10.1093/nar/gku438},
  timestamp = {Sun, 17 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/nar/RaihHNR0A14.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/Nadzirin0AR13,
  author    = {Nurul Nadzirin and
               Peter Willett and
               Peter J. Artymiuk and
               Mohd Firdaus Raih},
  title     = {{IMAAAGINE:} a webserver for searching hypothetical 3D amino acid
               side chain arrangements in the Protein Data Bank},
  journal   = {Nucleic Acids Res.},
  volume    = {41},
  number    = {Webserver-Issue},
  pages     = {432--440},
  year      = {2013},
  url       = {https://doi.org/10.1093/nar/gkt431},
  doi       = {10.1093/nar/gkt431},
  timestamp = {Sun, 17 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/nar/Nadzirin0AR13.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HamdaniA0AR12,
  author    = {Hazrina Yusof Hamdani and
               Sri Devan Appasamy and
               Peter Willett and
               Peter J. Artymiuk and
               Mohd Firdaus Raih},
  title     = {{NASSAM:} a server to search for and annotate tertiary interactions
               and motifs in three-dimensional structures of complex {RNA} molecules},
  journal   = {Nucleic Acids Res.},
  volume    = {40},
  number    = {Web-Server-Issue},
  pages     = {35--41},
  year      = {2012},
  url       = {https://doi.org/10.1093/nar/gks513},
  doi       = {10.1093/nar/gks513},
  timestamp = {Sun, 17 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/nar/HamdaniA0AR12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/NadzirinG0AR12,
  author    = {Nurul Nadzirin and
               Eleanor J. Gardiner and
               Peter Willett and
               Peter J. Artymiuk and
               Mohd Firdaus Raih},
  title     = {{SPRITE} and {ASSAM:} web servers for side chain 3D-motif searching
               in protein structures},
  journal   = {Nucleic Acids Res.},
  volume    = {40},
  number    = {Web-Server-Issue},
  pages     = {380--386},
  year      = {2012},
  url       = {https://doi.org/10.1093/nar/gks401},
  doi       = {10.1093/nar/gks401},
  timestamp = {Sun, 17 May 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/journals/nar/NadzirinG0AR12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RaihH0A11,
  author    = {Mohd Firdaus Raih and
               Anne{-}Marie Harrison and
               Peter Willett and
               Peter J. Artymiuk},
  title     = {Novel base triples in {RNA} structures revealed by graph theoretical
               searching methods},
  journal   = {{BMC} Bioinform.},
  volume    = {12},
  number    = {{S-13}},
  pages     = {S2},
  year      = {2011},
  url       = {https://doi.org/10.1186/1471-2105-12-S13-S2},
  doi       = {10.1186/1471-2105-12-S13-S2},
  timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/bmcbi/RaihH0A11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/lsgrid/RaihSMIKMM04,
  author    = {Mohd Firdaus Raih and
               Mohd Yunus Sharum and
               Raja Murzaferi Raja Moktar and
               Mohd Noor Mat Isa and
               Ng Lip Kian and
               Nor Muhammad Mahadi and
               Rahmah Mohamed},
  editor    = {Akihiko Konagaya and
               Kenji Satou},
  title     = {{EMASGRID:} An NBBnet Grid Initiative for a Bioinformatics and Computational
               Biology Services Infrastructure in Malaysia},
  booktitle = {Grid Computing in Life Science, First International Workshop on Life
               Science Grid, {LSGRID} 2004, Kanazawa, Japan, May 31 - June 1, 2004,
               Revised Selected andInvited Papers},
  series    = {Lecture Notes in Computer Science},
  volume    = {3370},
  pages     = {117--124},
  publisher = {Springer},
  year      = {2004},
  url       = {https://doi.org/10.1007/978-3-540-32251-1\_11},
  doi       = {10.1007/978-3-540-32251-1\_11},
  timestamp = {Tue, 14 May 2019 10:00:53 +0200},
  biburl    = {https://dblp.org/rec/conf/lsgrid/RaihSMIKMM04.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
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