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ORCIDNigel Collier
Nigel H. Collier
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- affiliation: University of Cambridge, UK
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2020 – today
- 2025
[j48]Tiancheng Hu, Yara Kyrychenko
, Steve Rathje, Nigel Collier, Sander van der Linden, Jon Roozenbeek:
Generative language models exhibit social identity biases. Nat. Comput. Sci. 5(1): 65-75 (2025)- [c121]Zongqian Li, Yinhong Liu, Yixuan Su, Nigel Collier:
Prompt Compression for Large Language Models: A Survey. NAACL (Long Papers) 2025: 7182-7195 - [i85]Yijiang River Dong, Tiancheng Hu, Yinhong Liu, Ahmet Üstün, Nigel Collier:
When Personalization Meets Reality: A Multi-Faceted Analysis of Personalized Preference Learning. CoRR abs/2502.19158 (2025) - [i84]Tiancheng Hu, Nigel Collier:
iNews: A Multimodal Dataset for Modeling Personalized Affective Responses to News. CoRR abs/2503.03335 (2025) - [i83]Zongqian Li, Ehsan Shareghi, Nigel Collier:
ReasonGraph: Visualisation of Reasoning Paths. CoRR abs/2503.03979 (2025) - [i82]Zongqian Li, Yixuan Su, Nigel Collier:
PT-MoE: An Efficient Finetuning Framework for Integrating Mixture-of-Experts into Prompt Tuning. CoRR abs/2505.09519 (2025) - [i81]Ruihan Yang, Caiqi Zhang, Zhisong Zhang, Xinting Huang, Dong Yu, Nigel Collier, Deqing Yang:
UNCLE: Uncertainty Expressions in Long-Form Generation. CoRR abs/2505.16922 (2025) - [i80]Caiqi Zhang, Xiaochen Zhu, Chengzu Li, Nigel Collier, Andreas Vlachos:
Reinforcement Learning for Better Verbalized Confidence in Long-Form Generation. CoRR abs/2505.23912 (2025) - 2024
- [c120]Zihao Fu, Meiru Zhang, Zaiqiao Meng, Yannan Shen, David L. Buckeridge, Nigel Collier:
BAND: Biomedical Alert News Dataset. AAAI 2024: 18012-18020 - [c119]Tiancheng Hu, Nigel Collier:
An Individualized News Affective Response Dataset. ACL (Student Research Workshop) 2024: 555-563 - [c118]Jiuzhou Han, Nigel Collier, Wray L. Buntine, Ehsan Shareghi:
PiVe: Prompting with Iterative Verification Improving Graph-based Generative Capability of LLMs. ACL (Findings) 2024: 6702-6718 - [c117]Yinhong Liu, Yimai Fang, David Vandyke, Nigel Collier:
TOAD: Task-Oriented Automatic Dialogs with Diverse Response Styles. ACL (Findings) 2024: 8341-8356 - [c116]Tiancheng Hu, Nigel Collier:
Quantifying the Persona Effect in LLM Simulations. ACL (1) 2024: 10289-10307 - [c115]Han Zhou, Xingchen Wan, Yinhong Liu, Nigel Collier, Ivan Vulic, Anna Korhonen:
Fairer Preferences Elicit Improved Human-Aligned Large Language Model Judgments. EMNLP 2024: 1241-1252 - [c114]Chengzu Li, Caiqi Zhang, Han Zhou, Nigel Collier, Anna Korhonen, Ivan Vulic:
TopViewRS: Vision-Language Models as Top-View Spatial Reasoners. EMNLP 2024: 1786-1807 - [c113]Caiqi Zhang, Fangyu Liu, Marco Basaldella, Nigel Collier:
LUQ: Long-text Uncertainty Quantification for LLMs. EMNLP 2024: 5244-5262 - [c112]Yijiang River Dong, Tiancheng Hu, Nigel Collier:
Can LLM be a Personalized Judge? EMNLP (Findings) 2024: 10126-10141 - [c111]Meiru Zhang, Zaiqiao Meng, Nigel Collier:
Can We Instruct LLMs to Compensate for Position Bias? EMNLP (Findings) 2024: 12545-12556 - [c110]Yinhong Liu, Yixuan Su, Ehsan Shareghi, Nigel Collier:
Unlocking Structure Measuring: Introducing PDD, an Automatic Metric for Positional Discourse Coherence. NAACL (Short Papers) 2024: 92-100 - [i79]Yinhong Liu, Yimai Fang, David Vandyke, Nigel Collier:
TOAD: Task-Oriented Automatic Dialogs with Diverse Response Styles. CoRR abs/2402.10137 (2024) - [i78]Yinhong Liu, Yixuan Su, Ehsan Shareghi, Nigel Collier:
Unlocking Structure Measuring: Introducing PDD, an Automatic Metric for Positional Discourse Coherence. CoRR abs/2402.10175 (2024) - [i77]Tiancheng Hu, Nigel Collier:
Quantifying the Persona Effect in LLM Simulations. CoRR abs/2402.10811 (2024) - [i76]Yinhong Liu, Han Zhou, Zhijiang Guo, Ehsan Shareghi, Ivan Vulic, Anna Korhonen, Nigel Collier:
Aligning with Human Judgement: The Role of Pairwise Preference in Large Language Model Evaluators. CoRR abs/2403.16950 (2024) - [i75]Caiqi Zhang, Fangyu Liu, Marco Basaldella, Nigel Collier:
LUQ: Long-text Uncertainty Quantification for LLMs. CoRR abs/2403.20279 (2024) - [i74]Chengzu Li, Caiqi Zhang, Han Zhou, Nigel Collier, Anna Korhonen, Ivan Vulic:
TopViewRS: Vision-Language Models as Top-View Spatial Reasoners. CoRR abs/2406.02537 (2024) - [i73]Han Zhou, Xingchen Wan, Yinhong Liu, Nigel Collier, Ivan Vulic, Anna Korhonen:
Fairer Preferences Elicit Improved Human-Aligned Large Language Model Judgments. CoRR abs/2406.11370 (2024) - [i72]Yijiang River Dong, Tiancheng Hu, Nigel Collier:
Can LLM be a Personalized Judge? CoRR abs/2406.11657 (2024) - [i71]Meiru Zhang, Zaiqiao Meng, Nigel Collier:
Attention Instruction: Amplifying Attention in the Middle via Prompting. CoRR abs/2406.17095 (2024) - [i70]Zongqian Li, Yixuan Su, Nigel Collier:
500xCompressor: Generalized Prompt Compression for Large Language Models. CoRR abs/2408.03094 (2024) - [i69]Yinhong Liu, Zhijiang Guo, Tianya Liang, Ehsan Shareghi, Ivan Vulic, Nigel Collier:
Aligning with Logic: Measuring, Evaluating and Improving Logical Consistency in Large Language Models. CoRR abs/2410.02205 (2024) - [i68]Zongqian Li, Yinhong Liu, Yixuan Su, Nigel Collier:
Prompt Compression for Large Language Models: A Survey. CoRR abs/2410.12388 (2024) - [i67]Xiaochen Zhu, Caiqi Zhang, Tom Stafford, Nigel Collier, Andreas Vlachos:
Conformity in Large Language Models. CoRR abs/2410.12428 (2024) - [i66]Caiqi Zhang, Ruihan Yang, Zhisong Zhang, Xinting Huang, Sen Yang, Dong Yu, Nigel Collier:
Atomic Calibration of LLMs in Long-Form Generations. CoRR abs/2410.13246 (2024) - [i65]Ruihan Yang, Caiqi Zhang, Zhisong Zhang, Xinting Huang, Sen Yang, Nigel Collier, Dong Yu, Deqing Yang:
LoGU: Long-form Generation with Uncertainty Expressions. CoRR abs/2410.14309 (2024) - 2023
- [j47]Fangyu Liu, Guy Emerson, Nigel Collier:
Visual Spatial Reasoning. Trans. Assoc. Comput. Linguistics 11: 635-651 (2023) - [j46]Yixuan Su, Nigel Collier:
Contrastive Search Is What You Need For Neural Text Generation. Trans. Mach. Learn. Res. 2023 (2023) - [c109]Zihao Fu, Haoran Yang, Anthony Man-Cho So, Wai Lam, Lidong Bing, Nigel Collier:
On the Effectiveness of Parameter-Efficient Fine-Tuning. AAAI 2023: 12799-12807 - [c108]Fangyu Liu, Julian Martin Eisenschlos, Francesco Piccinno, Syrine Krichene, Chenxi Pang, Kenton Lee, Mandar Joshi, Wenhu Chen, Nigel Collier, Yasemin Altun:
DePlot: One-shot visual language reasoning by plot-to-table translation. ACL (Findings) 2023: 10381-10399 - [c107]Fangyu Liu, Francesco Piccinno, Syrine Krichene, Chenxi Pang, Kenton Lee, Mandar Joshi, Yasemin Altun, Nigel Collier, Julian Martin Eisenschlos:
MatCha: Enhancing Visual Language Pretraining with Math Reasoning and Chart Derendering. ACL (1) 2023: 12756-12770 - [c106]Nigel Collier, Fangyu Liu, Ehsan Shareghi:
On Reality and the Limits of Language Data: Aligning LLMs with Human Norms. CogSci 2023 - [c105]Ivan Vulic, Goran Glavas, Fangyu Liu, Nigel Collier, Edoardo Maria Ponti, Anna Korhonen:
Probing Cross-Lingual Lexical Knowledge from Multilingual Sentence Encoders. EACL 2023: 2081-2097 - [c104]Chang Shu, Jiuzhou Han, Fangyu Liu, Ehsan Shareghi, Nigel Collier:
POSQA: Probe the World Models of LLMs with Size Comparisons. EMNLP (Findings) 2023: 7518-7531 - [c103]Zihao Fu, Yixuan Su, Zaiqiao Meng, Nigel Collier:
Biomedical Named Entity Recognition via Dictionary-based Synonym Generalization. EMNLP 2023: 14621-14635 - [c102]Huayang Li, Tian Lan, Zihao Fu, Deng Cai, Lemao Liu, Nigel Collier, Taro Watanabe, Yixuan Su:
Repetition In Repetition Out: Towards Understanding Neural Text Degeneration from the Data Perspective. NeurIPS 2023 - [i64]Zihao Fu, Anthony Man-Cho So, Nigel Collier:
A Stability Analysis of Fine-Tuning a Pre-Trained Model. CoRR abs/2301.09820 (2023) - [i63]Meiru Zhang, Yixuan Su, Zaiqiao Meng, Zihao Fu, Nigel Collier:
COFFEE: A Contrastive Oracle-Free Framework for Event Extraction. CoRR abs/2303.14452 (2023) - [i62]Zihao Fu, Wai Lam, Qian Yu, Anthony Man-Cho So, Shengding Hu, Zhiyuan Liu, Nigel Collier:
Decoder-Only or Encoder-Decoder? Interpreting Language Model as a Regularized Encoder-Decoder. CoRR abs/2304.04052 (2023) - [i61]Jiuzhou Han, Nigel Collier, Wray L. Buntine, Ehsan Shareghi:
PiVe: Prompting with Iterative Verification Improving Graph-based Generative Capability of LLMs. CoRR abs/2305.12392 (2023) - [i60]Zihao Fu, Yixuan Su, Zaiqiao Meng, Nigel Collier:
Biomedical Named Entity Recognition via Dictionary-based Synonym Generalization. CoRR abs/2305.13066 (2023) - [i59]Zihao Fu, Meiru Zhang, Zaiqiao Meng, Yannan Shen, Anya Okhmatovskaia, David L. Buckeridge, Nigel Collier:
BAND: Biomedical Alert News Dataset. CoRR abs/2305.14480 (2023) - [i58]Yupan Huang, Zaiqiao Meng, Fangyu Liu, Yixuan Su, Nigel Collier, Yutong Lu:
Sparkles: Unlocking Chats Across Multiple Images for Multimodal Instruction-Following Models. CoRR abs/2308.16463 (2023) - [i57]Baian Chen, Chang Shu, Ehsan Shareghi, Nigel Collier, Karthik Narasimhan, Shunyu Yao:
FireAct: Toward Language Agent Fine-tuning. CoRR abs/2310.05915 (2023) - [i56]Huayang Li, Tian Lan, Zihao Fu, Deng Cai, Lemao Liu, Nigel Collier, Taro Watanabe, Yixuan Su:
Repetition In Repetition Out: Towards Understanding Neural Text Degeneration from the Data Perspective. CoRR abs/2310.10226 (2023) - [i55]Chang Shu, Jiuzhou Han, Fangyu Liu, Ehsan Shareghi, Nigel Collier:
POSQA: Probe the World Models of LLMs with Size Comparisons. CoRR abs/2310.13394 (2023) - [i54]Tiancheng Hu, Yara Kyrychenko, Steve Rathje, Nigel Collier, Sander van der Linden, Jon Roozenbeek:
Generative Language Models Exhibit Social Identity Biases. CoRR abs/2310.15819 (2023) - [i53]Yinhong Liu, Yixuan Su, Ehsan Shareghi, Nigel Collier:
Instruct-SCTG: Guiding Sequential Controlled Text Generation through Instructions. CoRR abs/2312.12299 (2023) - 2022
- [j45]Mohammad Taher Pilehvar, Adam Bernard, Damian Smedley, Nigel Collier:
PheneBank: a literature-based database of phenotypes. Bioinform. 38(4): 1179-1180 (2022) - [j44]Zaiqiao Meng, Anya Okhmatovskaia, Maxime Polleri, Yannan Shen, Guido Powell, Zihao Fu, Iris Ganser, Meiru Zhang, Nicholas B. King, David L. Buckeridge, Nigel Collier:
BioCaster in 2021: automatic disease outbreaks detection from global news media. Bioinform. 38(18): 4446-4448 (2022) - [j43]Hoang-Quynh Le, Duy-Cat Can, Nigel Collier:
Exploiting document graphs for inter sentence relation extraction. J. Biomed. Semant. 13(1): 15 (2022) - [j42]Honghan Wu, Minhong Wang, Jinge Wu, Farah Francis, Yun-Hsuan Chang, Alex Shavick, Hang Dong, Michael Tin Chung Poon, Natalie K. Fitzpatrick, Adam P. Levine, Luke T. Slater, Alex Handy, Andreas Karwath, Georgios V. Gkoutos, Claude Chelala, Anoop D. Shah, Robert Stewart, Nigel Collier, Beatrice Alex, William Whiteley, Cathie Sudlow, Angus Roberts, Richard J. B. Dobson:
A survey on clinical natural language processing in the United Kingdom from 2007 to 2022. npj Digit. Medicine 5 (2022) - [c101]Costanza Conforti, Jakob Berndt, Mohammad Taher Pilehvar, Chryssi Giannitsarou, Flavio Toxvaerd, Nigel Collier:
Incorporating Stock Market Signals for Twitter Stance Detection. ACL (1) 2022: 4074-4091 - [c100]Yaoyiran Li, Fangyu Liu, Nigel Collier, Anna Korhonen, Ivan Vulic:
Improving Word Translation via Two-Stage Contrastive Learning. ACL (1) 2022: 4353-4374 - [c99]Zaiqiao Meng, Fangyu Liu, Ehsan Shareghi, Yixuan Su, Charlotte Collins, Nigel Collier:
Rewire-then-Probe: A Contrastive Recipe for Probing Biomedical Knowledge of Pre-trained Language Models. ACL (1) 2022: 4798-4810 - [c98]Wenxuan Zhou, Fangyu Liu, Ivan Vulic, Nigel Collier, Muhao Chen:
Prix-LM: Pretraining for Multilingual Knowledge Base Construction. ACL (1) 2022: 5412-5424 - [c97]Fangyu Liu, Julian Martin Eisenschlos, Jeremy R. Cole, Nigel Collier:
Do ever larger octopi still amplify reporting biases? Evidence from judgments of typical colour. AACL/IJCNLP (2) 2022: 210-220 - [c96]Aleksander Ficek, Fangyu Liu, Nigel Collier:
How to tackle an emerging topic? Combining strong and weak labels for Covid news NER. AACL/IJCNLP (2) 2022: 488-496 - [c95]Anya Okhmatovskaia, Yannan Shen, Iris Ganser, Nigel Collier, Nicholas B. King, Zaiqiao Meng, David L. Buckeridge:
A Conceptual Framework for Representing Events Under Public Health Surveillance. MIE 2022: 387-391 - [c94]Yixuan Su, Fangyu Liu, Zaiqiao Meng, Tian Lan, Lei Shu, Ehsan Shareghi, Nigel Collier:
TaCL: Improving BERT Pre-training with Token-aware Contrastive Learning. NAACL-HLT (Findings) 2022: 2497-2507 - [c93]Yixuan Su, Tian Lan, Yan Wang, Dani Yogatama, Lingpeng Kong, Nigel Collier:
A Contrastive Framework for Neural Text Generation. NeurIPS 2022 - [i52]Yixuan Su, Tian Lan, Yan Wang, Dani Yogatama, Lingpeng Kong, Nigel Collier:
A Contrastive Framework for Neural Text Generation. CoRR abs/2202.06417 (2022) - [i51]Yaoyiran Li, Fangyu Liu, Nigel Collier, Anna Korhonen, Ivan Vulic:
Improving Word Translation via Two-Stage Contrastive Learning. CoRR abs/2203.08307 (2022) - [i50]Ivan Vulic, Goran Glavas, Fangyu Liu, Nigel Collier, Edoardo Maria Ponti, Anna Korhonen:
Exposing Cross-Lingual Lexical Knowledge from Multilingual Sentence Encoders. CoRR abs/2205.00267 (2022) - [i49]Fangyu Liu, Guy Emerson, Nigel Collier:
Visual Spatial Reasoning. CoRR abs/2205.00363 (2022) - [i48]Yixuan Su, Tian Lan, Yahui Liu, Fangyu Liu, Dani Yogatama, Yan Wang, Lingpeng Kong, Nigel Collier:
Language Models Can See: Plugging Visual Controls in Text Generation. CoRR abs/2205.02655 (2022) - [i47]Nigel H. Collier, Fangyu Liu, Ehsan Shareghi:
On Reality and the Limits of Language Data. CoRR abs/2208.11981 (2022) - [i46]Fangyu Liu, Julian Martin Eisenschlos, Jeremy R. Cole, Nigel Collier:
Do ever larger octopi still amplify reporting biases? Evidence from judgments of typical colour. CoRR abs/2209.12786 (2022) - [i45]Aleksander Ficek, Fangyu Liu, Nigel Collier:
How to tackle an emerging topic? Combining strong and weak labels for Covid news NER. CoRR abs/2209.15108 (2022) - [i44]Yixuan Su, Nigel Collier:
Contrastive Search Is What You Need For Neural Text Generation. CoRR abs/2210.14140 (2022) - [i43]Zihao Fu, Haoran Yang, Anthony Man-Cho So, Wai Lam, Lidong Bing, Nigel Collier:
On the Effectiveness of Parameter-Efficient Fine-Tuning. CoRR abs/2211.15583 (2022) - [i42]Yinhong Liu, Yixuan Su, Ehsan Shareghi, Nigel Collier:
Plug-and-Play Recipe Generation with Content Planning. CoRR abs/2212.05093 (2022) - [i41]Fangyu Liu, Francesco Piccinno, Syrine Krichene, Chenxi Pang, Kenton Lee, Mandar Joshi, Yasemin Altun, Nigel H. Collier, Julian Martin Eisenschlos:
MatCha: Enhancing Visual Language Pretraining with Math Reasoning and Chart Derendering. CoRR abs/2212.09662 (2022) - [i40]Fangyu Liu, Julian Martin Eisenschlos, Francesco Piccinno, Syrine Krichene, Chenxi Pang, Kenton Lee, Mandar Joshi, Wenhu Chen, Nigel Collier, Yasemin Altun:
DePlot: One-shot visual language reasoning by plot-to-table translation. CoRR abs/2212.10505 (2022) - 2021
- [j41]Yixuan Su, Yan Wang, Deng Cai, Simon Baker, Anna Korhonen, Nigel Collier:
PROTOTYPE-TO-STYLE: Dialogue Generation With Style-Aware Editing on Retrieval Memory. IEEE ACM Trans. Audio Speech Lang. Process. 29: 2152-2161 (2021) - [c92]Fangyu Liu, Muhao Chen, Dan Roth, Nigel Collier:
Visual Pivoting for (Unsupervised) Entity Alignment. AAAI 2021: 4257-4266 - [c91]Yixuan Su, David Vandyke, Simon Baker, Yan Wang, Nigel Collier:
Keep the Primary, Rewrite the Secondary: A Two-Stage Approach for Paraphrase Generation. ACL/IJCNLP (Findings) 2021: 560-569 - [c90]Fangyu Liu, Ivan Vulic, Anna Korhonen, Nigel Collier:
Learning Domain-Specialised Representations for Cross-Lingual Biomedical Entity Linking. ACL/IJCNLP (2) 2021: 565-574 - [c89]Yixuan Su, Deng Cai, Qingyu Zhou, Zibo Lin, Simon Baker, Yunbo Cao, Shuming Shi, Nigel Collier, Yan Wang:
Dialogue Response Selection with Hierarchical Curriculum Learning. ACL/IJCNLP (1) 2021: 1740-1751 - [c88]Thomas Hikaru Clark, Costanza Conforti, Fangyu Liu, Zaiqiao Meng, Ehsan Shareghi, Nigel Collier:
Integrating Transformers and Knowledge Graphs for Twitter Stance Detection. W-NUT 2021: 304-312 - [c87]Qianchu Liu, Fangyu Liu, Nigel Collier, Anna Korhonen, Ivan Vulic:
MirrorWiC: On Eliciting Word-in-Context Representations from Pretrained Language Models. CoNLL 2021: 562-574 - [c86]Costanza Conforti, Jakob Berndt, Marco Basaldella, Mohammad Taher Pilehvar, Chryssi Giannitsarou, Flavio Toxvaerd, Nigel Collier:
Adversarial Training for News Stance Detection: Leveraging Signals from a Multi-Genre Corpus. EACL (Hackashop) 2021: 1-7 - [c85]Yixuan Su, Deng Cai, Yan Wang, David Vandyke, Simon Baker, Piji Li, Nigel Collier:
Non-Autoregressive Text Generation with Pre-trained Language Models. EACL 2021: 234-243 - [c84]Yixuan Su, David Vandyke, Sihui Wang, Yimai Fang, Nigel Collier:
Plan-then-Generate: Controlled Data-to-Text Generation via Planning. EMNLP (Findings) 2021: 895-909 - [c83]Yixuan Su, Zaiqiao Meng, Simon Baker, Nigel Collier:
Few-Shot Table-to-Text Generation with Prototype Memory. EMNLP (Findings) 2021: 910-917 - [c82]Fangyu Liu, Ivan Vulic, Anna Korhonen, Nigel Collier:
Fast, Effective, and Self-Supervised: Transforming Masked Language Models into Universal Lexical and Sentence Encoders. EMNLP (1) 2021: 1442-1459 - [c81]Zaiqiao Meng, Fangyu Liu, Thomas Hikaru Clark, Ehsan Shareghi, Nigel Collier:
Mixture-of-Partitions: Infusing Large Biomedical Knowledge Graphs into BERT. EMNLP (1) 2021: 4672-4681 - [c80]Fangyu Liu, Emanuele Bugliarello, Edoardo Maria Ponti, Siva Reddy, Nigel Collier, Desmond Elliott:
Visually Grounded Reasoning across Languages and Cultures. EMNLP (1) 2021: 10467-10485 - [c79]Fangyu Liu, Ehsan Shareghi, Zaiqiao Meng, Marco Basaldella, Nigel Collier:
Self-Alignment Pretraining for Biomedical Entity Representations. NAACL-HLT 2021: 4228-4238 - [c78]Victor Prokhorov, Yingzhen Li, Ehsan Shareghi, Nigel Collier:
Learning Sparse Sentence Encoding without Supervision: An Exploration of Sparsity in Variational Autoencoders. RepL4NLP@ACL-IJCNLP 2021: 34-46 - [c77]Costanza Conforti, Jakob Berndt, Mohammad Taher Pilehvar, Chryssi Giannitsarou, Flavio Toxvaerd, Nigel Collier:
Synthetic Examples Improve Cross-Target Generalization: A Study on Stance Detection on a Twitter corpus. WASSA@EACL 2021: 181-187 - [i39]Yixuan Su, Deng Cai, Yan Wang, David Vandyke, Simon Baker, Piji Li, Nigel Collier:
Non-Autoregressive Text Generation with Pre-trained Language Models. CoRR abs/2102.08220 (2021) - [i38]Fangyu Liu, Ivan Vulic, Anna Korhonen, Nigel Collier:
Fast, Effective and Self-Supervised: Transforming Masked LanguageModels into Universal Lexical and Sentence Encoders. CoRR abs/2104.08027 (2021) - [i37]Fangyu Liu, Ivan Vulic, Anna Korhonen, Nigel Collier:
Learning Domain-Specialised Representations for Cross-Lingual Biomedical Entity Linking. CoRR abs/2105.14398 (2021) - [i36]Yixuan Su, Zaiqiao Meng, Simon Baker, Nigel Collier:
Few-Shot Table-to-Text Generation with Prototype Memory. CoRR abs/2108.12516 (2021) - [i35]Yixuan Su, David Vandyke, Sihui Wang, Yimai Fang, Nigel Collier:
Plan-then-Generate: Controlled Data-to-Text Generation via Planning. CoRR abs/2108.13740 (2021) - [i34]Zaiqiao Meng, Fangyu Liu, Thomas Hikaru Clark, Ehsan Shareghi, Nigel Collier:
Mixture-of-Partitions: Infusing Large Biomedical Knowledge Graphs into BERT. CoRR abs/2109.04810 (2021) - [i33]Qianchu Liu, Fangyu Liu, Nigel Collier, Anna Korhonen, Ivan Vulic:
MirrorWiC: On Eliciting Word-in-Context Representations from Pretrained Language Models. CoRR abs/2109.09237 (2021) - [i32]Fangyu Liu, Emanuele Bugliarello, Edoardo Maria Ponti, Siva Reddy, Nigel Collier, Desmond Elliott:
Visually Grounded Reasoning across Languages and Cultures. CoRR abs/2109.13238 (2021) - [i31]Zaiqiao Meng, Fangyu Liu, Ehsan Shareghi, Yixuan Su, Charlotte Collins, Nigel Collier:
Rewire-then-Probe: A Contrastive Recipe for Probing Biomedical Knowledge of Pre-trained Language Models. CoRR abs/2110.08173 (2021) - [i30]Wenxuan Zhou, Fangyu Liu, Ivan Vulic, Nigel Collier, Muhao Chen:
Prix-LM: Pretraining for Multilingual Knowledge Base Construction. CoRR abs/2110.08443 (2021) - [i29]Yixuan Su, Fangyu Liu, Zaiqiao Meng, Lei Shu, Ehsan Shareghi, Nigel Collier:
TaCL: Improving BERT Pre-training with Token-aware Contrastive Learning. CoRR abs/2111.04198 (2021) - 2020
- [j40]Milan Gritta, Mohammad Taher Pilehvar, Nigel Collier:
A pragmatic guide to geoparsing evaluation. Lang. Resour. Evaluation 54(3): 683-712 (2020) - [c76]Costanza Conforti, Jakob Berndt, Mohammad Taher Pilehvar, Chryssi Giannitsarou, Flavio Toxvaerd, Nigel Collier:
Will-They-Won't-They: A Very Large Dataset for Stance Detection on Twitter. ACL 2020: 1715-1724 - [c75]Marco Basaldella, Fangyu Liu, Ehsan Shareghi, Nigel Collier:
COMETA: A Corpus for Medical Entity Linking in the Social Media. EMNLP (1) 2020: 3122-3137 - [c74]Costanza Conforti, Jakob Berndt, Mohammad Taher Pilehvar, Chryssi Giannitsarou, Flavio Toxvaerd, Nigel Collier:
STANDER: An Expert-Annotated Dataset for News Stance Detection and Evidence Retrieval. EMNLP (Findings) 2020: 4086-4101 - [d6]Mohammad Taher Pilehvar, Nigel Collier, Adam Bernard, Damian Smedley:
PheneBank: Processed Medline Abstracts and PMC full articles + Phenotype-Disease Associations. Version 1.1. Zenodo, 2020 [all versions]
- [d5]Mohammad Taher Pilehvar, Nigel Collier, Adam Bernard, Damian Smedley:
PheneBank: Processed Medline Abstracts and PMC full articles + Phenotype-Disease Associations. Version 1.1. Zenodo, 2020 [all versions] - [i28]Yixuan Su, Deng Cai, Yan Wang, Simon Baker, Anna Korhonen, Nigel Collier, Xiaojiang Liu:
Stylistic Dialogue Generation via Information-Guided Reinforcement Learning Strategy. CoRR abs/2004.02202 (2020) - [i27]Yixuan Su, Yan Wang, Simon Baker, Deng Cai, Xiaojiang Liu, Anna Korhonen, Nigel Collier:
Prototype-to-Style: Dialogue Generation with Style-Aware Editing on Retrieval Memory. CoRR abs/2004.02214 (2020) - [i26]Costanza Conforti, Jakob Berndt, Mohammad Taher Pilehvar, Chryssi Giannitsarou, Flavio Toxvaerd, Nigel Collier:
Will-They-Won't-They: A Very Large Dataset for Stance Detection on Twitter. CoRR abs/2005.00388 (2020) - [i25]Victor Prokhorov, Yingzhen Li, Ehsan Shareghi, Nigel Collier:
Hierarchical Sparse Variational Autoencoder for Text Encoding. CoRR abs/2009.12421 (2020) - [i24]Fangyu Liu, Muhao Chen, Dan Roth, Nigel Collier:
Visual Pivoting for (Unsupervised) Entity Alignment. CoRR abs/2009.13603 (2020) - [i23]Marco Basaldella, Fangyu Liu, Ehsan Shareghi, Nigel Collier:
COMETA: A Corpus for Medical Entity Linking in the Social Media. CoRR abs/2010.03295 (2020) - [i22]Fangyu Liu, Ehsan Shareghi, Zaiqiao Meng, Marco Basaldella, Nigel Collier:
Self-alignment Pre-training for Biomedical Entity Representations. CoRR abs/2010.11784 (2020) - [i21]Yixuan Su, Deng Cai, Qingyu Zhou, Zibo Lin, Simon Baker, Yunbo Cao, Shuming Shi, Nigel Collier, Yan Wang:
Dialogue Response Selection with Hierarchical Curriculum Learning. CoRR abs/2012.14756 (2020)
2010 – 2019
- 2019
- [c73]Victor Prokhorov, Mohammad Taher Pilehvar, Dimitri Kartsaklis, Pietro Liò, Nigel Collier:
Unseen Word Representation by Aligning Heterogeneous Lexical Semantic Spaces. AAAI 2019: 6900-6907 - [c72]Marco Basaldella, Nigel Collier:
BioReddit: Word Embeddings for User-Generated Biomedical NLP. LOUHI@EMNLP 2019: 34-38 - [c71]Victor Prokhorov, Ehsan Shareghi, Yingzhen Li, Mohammad Taher Pilehvar, Nigel Collier:
On the Importance of the Kullback-Leibler Divergence Term in Variational Autoencoders for Text Generation. NGT@EMNLP-IJCNLP 2019: 118-127 - [c70]Victor Prokhorov, Mohammad Taher Pilehvar, Nigel Collier:
Generating Knowledge Graph Paths from Textual Definitions using Sequence-to-Sequence Models. NAACL-HLT (1) 2019: 1968-1976 - [c69]Duy-Cat Can, Hoang-Quynh Le, Quang-Thuy Ha, Nigel Collier:
A Richer-but-Smarter Shortest Dependency Path with Attentive Augmentation for Relation Extraction. NAACL-HLT (1) 2019: 2902-2912 - [i20]Victor Prokhorov, Mohammad Taher Pilehvar, Nigel Collier:
Generating Knowledge Graph Paths from Textual Definitions using Sequence-to-Sequence Models. CoRR abs/1904.02996 (2019) - [i19]Victor Prokhorov, Ehsan Shareghi, Yingzhen Li, Mohammad Taher Pilehvar, Nigel Collier:
On the Importance of the Kullback-Leibler Divergence Term in Variational Autoencoders for Text Generation. CoRR abs/1909.13668 (2019) - [i18]Son Doan, Mike Conway, Nigel Collier:
An Empirical Study of Sections in Classifying Disease Outbreak Reports. CoRR abs/1911.09319 (2019) - [i17]Son Doan, Quoc Hung Ngo, Ai Kawazoe, Nigel Collier:
Global Health Monitor: A Web-based System for Detecting and Mapping Infectious Diseases. CoRR abs/1911.09735 (2019) - 2018
- [j39]Milan Gritta, Mohammad Taher Pilehvar, Nut Limsopatham, Nigel Collier:
What's missing in geographical parsing? Lang. Resour. Evaluation 52(2): 603-623 (2018) - [c68]Milan Gritta, Mohammad Taher Pilehvar, Nigel Collier:
Which Melbourne? Augmenting Geocoding with Maps. ACL (1) 2018: 1285-1296 - [c67]Costanza Conforti, Mohammad Taher Pilehvar, Nigel Collier:
Modeling the Fake News Challenge as a Cross-Level Stance Detection Task. CIKM Workshops 2018 - [c66]Costanza Conforti, Mohammad Taher Pilehvar, Nigel Collier:
Towards Automatic Fake News Detection: Cross-Level Stance Detection in News Articles. FEVER@EMNLP 2018: 40-49 - [c65]Mohammad Taher Pilehvar, Dimitri Kartsaklis, Victor Prokhorov, Nigel Collier:
Card-660: A Reliable Evaluation Framework for Rare Word Representation Models. EMNLP 2018: 1391-1401 - [c64]Dimitri Kartsaklis, Mohammad Taher Pilehvar, Nigel Collier:
Mapping Text to Knowledge Graph Entities using Multi-Sense LSTMs. EMNLP 2018: 1959-1970 - [c63]Hoang-Quynh Le, Duy-Cat Can, Sinh T. Vu, Thanh Hai Dang, Mohammad Taher Pilehvar, Nigel Collier:
Large-scale Exploration of Neural Relation Classification Architectures. EMNLP 2018: 2266-2277 - [d4]Nigel Collier, Mohammad Taher Pilehvar, Adam Bernard, Damian Smedley:
PheneBank: Processed Medline Abstracts. Version 1.0. Zenodo, 2018 [all versions] - [d3]Nigel Collier, Mohammad Taher Pilehvar, Adam Bernard, Damian Smedley:
PheneBank: Processed Medline Abstracts and PMC full articles. Version 1.0. Zenodo, 2018 [all versions] - [d2]Nigel Collier, Mohammad Taher Pilehvar, Adam Bernard, Damian Smedley:
PheneBank: Processed Medline Abstracts and PMC full articles. Version 1.0. Zenodo, 2018 [all versions] - [d1]Nigel Collier, Mohammad Taher Pilehvar, Adam Bernard, Damian Smedley:
PheneBank: Processed Medline Abstracts and PMC full articles. Version 1.0. Zenodo, 2018 [all versions] - [i16]Dimitri Kartsaklis, Mohammad Taher Pilehvar, Nigel Collier:
Mapping Text to Knowledge Graph Entities using Multi-Sense LSTMs. CoRR abs/1808.07724 (2018) - [i15]Mohammad Taher Pilehvar, Dimitri Kartsaklis, Victor Prokhorov, Nigel Collier:
Card-660: Cambridge Rare Word Dataset - a Reliable Benchmark for Infrequent Word Representation Models. CoRR abs/1808.09308 (2018) - [i14]Milan Gritta, Mohammad Taher Pilehvar, Nigel Collier:
A Pragmatic Guide to Geoparsing Evaluation. CoRR abs/1810.12368 (2018) - [i13]Victor Prokhorov, Mohammad Taher Pilehvar, Dimitri Kartsaklis, Pietro Liò, Nigel Collier:
Unseen Word Representation by Aligning Heterogeneous Lexical Semantic Spaces. CoRR abs/1811.04983 (2018) - 2017
- [c62]Milan Gritta, Mohammad Taher Pilehvar, Nut Limsopatham, Nigel Collier:
Vancouver Welcomes You! Minimalist Location Metonymy Resolution. ACL (1) 2017: 1248-1259 - [c61]Mohammad Taher Pilehvar, José Camacho-Collados, Roberto Navigli, Nigel Collier:
Towards a Seamless Integration of Word Senses into Downstream NLP Applications. ACL (1) 2017: 1857-1869 - [c60]Mohammad Taher Pilehvar, Nigel Collier:
Inducing Embeddings for Rare and Unseen Words by Leveraging Lexical Resources. EACL (2) 2017: 388-393 - [c59]Hoang-Quynh Le, Duy-Cat Can, Thanh Hai Dang, Mai-Vu Tran, Quang-Thuy Ha, Nigel Collier:
Improving chemical-induced disease relation extraction with learned features based on convolutional neural network. KSE 2017: 292-297 - [c58]José Camacho-Collados, Mohammad Taher Pilehvar, Nigel Collier, Roberto Navigli:
SemEval-2017 Task 2: Multilingual and Cross-lingual Semantic Word Similarity. SemEval@ACL 2017: 15-26 - [c57]Nigel Collier, Nut Limsopatham, Aron Culotta, Mike Conway, Ingemar J. Cox, Vasileios Lampos:
WSDM 2017 Workshop on Mining Online Health Reports: MOHRS 2017. WSDM 2017: 825-826 - [i12]Victor Prokhorov, Mohammad Taher Pilehvar, Dimitri Kartsaklis, Pietro Liò, Nigel Collier:
Learning Rare Word Representations using Semantic Bridging. CoRR abs/1707.07554 (2017) - [i11]Mohammad Taher Pilehvar, José Camacho-Collados, Roberto Navigli, Nigel Collier:
Towards a Seamless Integration of Word Senses into Downstream NLP Applications. CoRR abs/1710.06632 (2017) - 2016
- [j38]Anika Oellrich, Nigel Collier, Tudor Groza, Dietrich Rebholz-Schuhmann, Nigam Shah, Olivier Bodenreider, Mary Regina Boland, Ivo I. Georgiev, Hongfang Liu, Kevin M. Livingston, Augustin Luna, Ann-Marie Mallon, Prashanti Manda, Peter N. Robinson, Gabriella Rustici, Michelle Simon, Liqin Wang, Rainer Winnenburg, Michel Dumontier:
The digital revolution in phenotyping. Briefings Bioinform. 17(5): 819-830 (2016) - [j37]Hoang-Quynh Le, Mai-Vu Tran, Thanh Hai Dang, Quang-Thuy Ha, Nigel Collier:
Sieve-based coreference resolution enhances semi-supervised learning model for chemical-induced disease relation extraction. Database J. Biol. Databases Curation 2016 (2016) - [j36]Hoang-Quynh Le, Mai-Vu Tran, Thanh Hai Dang, Quang-Thuy Ha, Nigel Collier:
Sieve-based coreference resolution enhances semi-supervised learning model for chemical-induced disease relation extraction. Database J. Biol. Databases Curation 2016 (2016) - [j35]Karin Verspoor, Anika Oellrich, Nigel Collier, Tudor Groza, Philippe Rocca-Serra, Larisa N. Soldatova, Michel Dumontier, Nigam Shah:
Thematic issue of the Second combined Bio-ontologies and Phenotypes Workshop. J. Biomed. Semant. 7: 66:1-66:4 (2016) - [c56]Nut Limsopatham, Nigel Collier:
Normalising Medical Concepts in Social Media Texts by Learning Semantic Representation. ACL (1) 2016 - [c55]Nigel Collier:
NLP and Online Health Reports: What do we say and what do we mean? Louhi@EMNLP 2016: 85 - [c54]Nut Limsopatham, Nigel Collier:
Bidirectional LSTM for Named Entity Recognition in Twitter Messages. NUT@COLING 2016: 145-152 - [c53]Mohammad Taher Pilehvar, Nigel Collier:
Improved Semantic Representation for Domain-Specific Entities. BioNLP@ACL 2016: 12-16 - [c52]Nut Limsopatham, Nigel Collier:
Modelling the Combination of Generic and Target Domain Embeddings in a Convolutional Neural Network for Sentence Classification. BioNLP@ACL 2016: 136-140 - [c51]Nut Limsopatham, Nigel Collier:
Learning Orthographic Features in Bi-directional LSTM for Biomedical Named Entity Recognition. BioTxtM@COLING 2016 2016: 10-19 - [c50]Mohammad Taher Pilehvar, Nigel Collier:
De-Conflated Semantic Representations. EMNLP 2016: 1680-1690 - [i10]Mohammad Taher Pilehvar, Nigel Collier:
De-Conflated Semantic Representations. CoRR abs/1608.01961 (2016) - 2015
- [j34]Nigel Collier, Tudor Groza, Damian Smedley, Peter N. Robinson, Anika Oellrich, Dietrich Rebholz-Schuhmann:
PhenoMiner: from text to a database of phenotypes associated with OMIM diseases. Database J. Biol. Databases Curation 2015 (2015) - [j33]Tudor Groza, Sebastian Köhler, Sandra C. Doelken, Nigel Collier, Anika Oellrich, Damian Smedley, Francisco M. Couto, Gareth Baynam, Andreas Zankl, Peter N. Robinson:
Automatic concept recognition using the Human Phenotype Ontology reference and test suite corpora. Database J. Biol. Databases Curation 2015 (2015) - [j32]Nigel Collier, Anika Oellrich, Tudor Groza:
Concept selection for phenotypes and diseases using learn to rank. J. Biomed. Semant. 6: 24 (2015) - [j31]Larisa N. Soldatova, Nigel Collier, Anika Oellrich, Tudor Groza, Karin Verspoor, Philippe Rocca-Serra, Michel Dumontier, Nigam H. Shah:
Special issue on bio-ontologies and phenotypes. J. Biomed. Semant. 6: 40 (2015) - [j30]Nestor Alvaro, Mike Conway, Son Doan, Christoph Lofi, John P. Overington, Nigel Collier:
Crowdsourcing Twitter annotations to identify first-hand experiences of prescription drug use. J. Biomed. Informatics 58: 280-287 (2015) - [c49]Nut Limsopatham, Nigel Collier:
Towards the Semantic Interpretation of Personal Health Messages from Social Media. UCUI@CIKM 2015: 27-30 - [c48]Nut Limsopatham, Nigel Collier:
Adapting Phrase-based Machine Translation to Normalise Medical Terms in Social Media Messages. EMNLP 2015: 1675-1680 - [i9]Nut Limsopatham, Nigel Collier:
Adapting Phrase-based Machine Translation to Normalise Medical Terms in Social Media Messages. CoRR abs/1508.02285 (2015) - 2014
- [c47]Nigel Collier, Mai-Vu Tran, Ferdinand Paster:
The impact of near domain transfer on biomedical named entity recognition. Louhi@EACL 2014: 11-20 - [c46]Christoph Lofi, Christian Nieke, Nigel Collier:
Discriminating Rhetorical Analogies in Social Media. EACL 2014: 560-568 - 2013
- [j29]Bao-Khanh Ho Vo, Nigel Collier:
Twitter Emotion Analysis in Earthquake Situations. Int. J. Comput. Linguistics Appl. 4(1): 159-173 (2013) - [j28]Song Liu, Makoto Yamada, Nigel Collier, Masashi Sugiyama:
Change-point detection in time-series data by relative density-ratio estimation. Neural Networks 43: 72-83 (2013) - [c45]Tudor Groza, Anika Oellrich, Nigel Collier:
Using silver and semi-gold standard corpora to compare open named entity recognisers. BIBM 2013: 481-485 - [c44]Mai-Vu Tran, Nigel Collier, Hoang-Quynh Le, Van-Thuy Phi, Thanh-Binh Pham:
Exploring a Probabilistic Earley Parser for Event Composition in Biomedical Texts. BioNLP@ACL (Shared Task) 2013: 130-134 - [c43]Yang Bao, Nigel Collier, Anindya Datta:
A partially supervised cross-collection topic model for cross-domain text classification. CIKM 2013: 239-248 - 2012
- [j27]Nigel Collier, Son Doan:
GENI-DB: a database of global events for epidemic intelligence. Bioinform. 28(8): 1186-1188 (2012) - [j26]Son Doan, Nigel Collier, Hua Xu, Pham Duy, Tu Minh Phuong:
Recognition of medication information from discharge summaries using ensembles of classifiers. BMC Medical Informatics Decis. Mak. 12: 36 (2012) - [c42]Nigel Collier, Mai-Vu Tran, Hoang-Quynh Le, Anika Oellrich, Ai Kawazoe, Martin Hall-May, Dietrich Rebholz-Schuhmann:
A Hybrid Approach to Finding Phenotype Candidates in Genetic Texts. COLING 2012: 647-662 - [c41]Jey Han Lau, Nigel Collier, Timothy Baldwin:
On-line Trend Analysis with Topic Models: \#twitter Trends Detection Topic Model Online. COLING 2012: 1519-1534 - [c40]Son Doan, Lucila Ohno-Machado, Nigel Collier:
Enhancing Twitter Data Analysis with Simple Semantic Filtering: Example in Tracking Influenza-Like Illnesses. HISB 2012: 62-71 - [c39]Song Liu, Makoto Yamada, Nigel Collier, Masashi Sugiyama:
Change-Point Detection in Time-Series Data by Relative Density-Ratio Estimation. SSPR/SPR 2012: 363-372 - [i8]Song Liu, Makoto Yamada, Nigel Collier, Masashi Sugiyama:
Change-Point Detection in Time-Series Data by Relative Density-Ratio Estimation. CoRR abs/1203.0453 (2012) - [i7]Son Doan, Lucila Ohno-Machado, Nigel Collier:
Enhancing Twitter Data Analysis with Simple Semantic Filtering: Example in Tracking Influenza-Like Illnesses. CoRR abs/1210.0848 (2012) - 2011
- [j25]Dietrich Rebholz-Schuhmann, Fabio Rinaldi, Sampo Pyysalo, Nigel Collier, Udo Hahn:
Towards mature use of semantic resources for biomedical analyses. J. Biomed. Semant. 2(S-5): I1 (2011) - [j24]Nigel Collier:
Towards cross-lingual alerting for bursty epidemic events. J. Biomed. Semant. 2(S-5): S10 (2011) - [j23]Dietrich Rebholz-Schuhmann, Antonio Jimeno-Yepes, Chen Li, Senay Kafkas, Ian Lewin, Ning Kang, Peter T. Corbett, David Milward, Ekaterina Buyko, Elena Beisswanger, Kerstin Hornbostel, Alexandre Kouznetsov, René Witte, Jonas B. Laurila, Christopher J. O. Baker, Cheng-Ju Kuo, Simon Clematide, Fabio Rinaldi, Richárd Farkas, György Móra, Kazuo Hara, Laura Inés Furlong, Michael Rautschka, Mariana L. Neves, Alberto D. Pascual-Montano, Qi Wei, Nigel Collier, Md. Faisal Mahbub Chowdhury, Alberto Lavelli, Rafael Berlanga Llavori, Roser Morante, Vincent Van Asch, Walter Daelemans, José Luís Marina, Erik M. van Mulligen, Jan A. Kors, Udo Hahn:
Assessment of NER solutions against the first and second CALBC Silver Standard Corpus. J. Biomed. Semant. 2(S-5): S11 (2011) - [j22]Nigel Collier, Nguyen Truong Son, Ngoc Mai Nguyen:
OMG U got flu? Analysis of shared health messages for bio-surveillance. J. Biomed. Semant. 2(S-5): S9 (2011) - [c38]Son Doan, Bao-Khanh Ho Vo, Nigel Collier:
An Analysis of Twitter Messages in the 2011 Tohoku Earthquake. eHealth 2011: 58-66 - [c37]Nigel Collier, Son Doan:
Syndromic Classification of Twitter Messages. eHealth 2011: 186-195 - [e4]Nigel Collier, Udo Hahn, Dietrich Rebholz-Schuhmann, Fabio Rinaldi, Sampo Pyysalo:
Proceedings of the Fourth International Symposium for Semantic Mining in Biomedicine, Cambridge, United Kingdom, October, 2010. CEUR Workshop Proceedings 714, CEUR-WS.org 2011 [contents] - [i6]Son Doan, Bao-Khanh Ho Vo, Nigel Collier:
An analysis of Twitter messages in the 2011 Tohoku Earthquake. CoRR abs/1109.1618 (2011) - [i5]Nigel Collier:
Towards cross-lingual alerting for bursty epidemic events. CoRR abs/1110.3088 (2011) - [i4]Nigel Collier, Nguyen Truong Son, Ngoc Mai Nguyen:
OMG U got flu? Analysis of shared health messages for bio-surveillance. CoRR abs/1110.3089 (2011) - [i3]Nigel Collier:
What's unusual in online disease outbreak news? CoRR abs/1110.3091 (2011) - [i2]Nigel Collier, Son Doan:
Syndromic classification of Twitter messages. CoRR abs/1110.3094 (2011) - 2010
- [j21]Nigel Collier:
What's unusual in online disease outbreak news? J. Biomed. Semant. 1: 2 (2010) - [j20]Hutchatai Chanlekha, Nigel Collier:
Analysis of syntactic and semantic features for fine-grained event-spatial understanding in outbreak news reports. J. Biomed. Semant. 1: 3 (2010) - [j19]Hutchatai Chanlekha, Nigel Collier:
A methodology to enhance spatial understanding of disease outbreak events reported in news articles. Int. J. Medical Informatics 79(4): 284-296 (2010) - [j18]Dietrich Rebholz-Schuhmann, Nigel Collier, Jong C. Park, Limsoon Wong:
Wrestling with Biomedical Research Results: Language Resources and Literature Analysis. J. Bioinform. Comput. Biol. 8(1): 129-130 (2010) - [j17]Hutchatai Chanlekha, Ai Kawazoe, Nigel Collier:
A framework for enhancing spatial and temporal granularity in report-based health surveillance systems. BMC Medical Informatics Decis. Mak. 10: 1 (2010) - [c36]Nigel Collier, Reiko Matsuda Goodwin, John P. McCrae, Son Doan, Ai Kawazoe, Mike Conway, Asanee Kawtrakul, Koichi Takeuchi, Dinh Dien:
An ontology-driven system for detecting global health events. COLING 2010: 215-222 - [c35]Nigel Collier:
Towards cross-lingual alerting for bursty epidemic events. Semantic Mining in Biomedicine 2010 - [c34]Nigel Collier, Nguyen Truong Son, Mai Nguyen Thi Ngoc:
OMG U got flu? Analysis of shared health messages for bio-surveillance. Semantic Mining in Biomedicine 2010 - [c33]Dietrich Rebholz-Schuhmann, Antonio Jimeno-Yepes, Chen Li, Senay Kafkas, Ian Lewin, Ning Kang, Peter T. Corbett, David Milward, Ekaterina Buyko, Elena Beisswanger, Kerstin Hornbostel, Alexandre Kouznetsov, René Witte, Jonas B. Laurila, Christopher J. O. Baker, Cheng-Ju Kuo, Simon Clematide, Fabio Rinaldi, Richárd Farkas, György Móra, Kazuo Hara, Laura Inés Furlong, Michael Rautschka, Mariana L. Neves, Alberto D. Pascual-Montano, Qi Wei, Nigel Collier, Md. Faisal Mahbub Chowdhury, Alberto Lavelli, Rafael Berlanga Llavori, Roser Morante, Vincent Van Asch, Walter Daelemans, José Luís Marina, Erik M. van Mulligen, Jan A. Kors, Udo Hahn:
Assessment of NER solutions against the first and second CALBC silver standard corpus. Semantic Mining in Biomedicine 2010 - [p1]Son Doan, Mike Conway, Nigel Collier:
An Empirical Study of Sections in Classifying Disease Outbreak Reports. Web-Based Applications in Healthcare and Biomedicine 2010: 47-58
2000 – 2009
- 2009
- [j16]Ai Kawazoe, Lihua Jin, Mika Shigematsu, Daisuke Bekki, Roberto A. Barrero, Kiyosu Taniguchi, Nigel Collier:
The development of a schema for semantic annotation: Gain brought by a formal ontological method. Appl. Ontology 4(1): 5-20 (2009) - [j15]Mike Conway, Son Doan, Ai Kawazoe, Nigel Collier:
Classifying disease outbreak reports using n-grams and semantic features. Int. J. Medical Informatics 78(12): 47-58 (2009) - [j14]Son Doan, Ai Kawazoe, Mike Conway, Nigel Collier:
Towards role-based filtering of disease outbreak reports. J. Biomed. Informatics 42(5): 773-780 (2009) - [c32]Mike Conway, Son Doan, Nigel Collier:
Using Hedges to Enhance a Disease Outbreak Report Text Mining System. BioNLP@HLT-NAACL 2009: 142-143 - 2008
- [j13]Nigel Collier, Son Doan, Ai Kawazoe, Reiko Matsuda Goodwin, Mike Conway, Yoshio Tateno, Hung Quoc Ngo, Dinh Dien, Asanee Kawtrakul, Koichi Takeuchi, Mika Shigematsu, Kiyosu Taniguchi:
BioCaster: detecting public health rumors with a Web-based text mining system. Bioinform. 24(24): 2940-2941 (2008) - [j12]Ai Kawazoe, Hutchatai Chanlekha, Mika Shigematsu, Nigel Collier:
Structuring an event ontology for disease outbreak detection. BMC Bioinform. 9(S-3) (2008) - [j11]John P. McCrae, Nigel Collier:
Synonym set extraction from the biomedical literature by lexical pattern discovery. BMC Bioinform. 9 (2008) - [c31]Anna Korhonen, Yuval Krymolowski, Nigel Collier:
The Choice of Features for Classification of Verbs in Biomedical Texts. COLING 2008: 449-456 - [c30]Son Doan, Hung Quoc Ngo, Ai Kawazoe, Nigel Collier:
Global Health Monitor - A Web-based System for Detecting and Mapping Infectious Diseases. IJCNLP 2008: 951-956 - 2007
- [j10]Pham Thi Xuan Thao, Tran Quoc Tri, Dinh Dien, Nigel Collier:
Named entity recognition in Vietnamese using classifier voting. ACM Trans. Asian Lang. Inf. Process. 6(4): 3:1-3:18 (2007) - [c29]Vu Cong Duy Hoang, Nguyen Le Nguyen, Dien Dinh, Nigel Collier:
Topic-Based Vietnamese News Document Filtering in the BioCaster Project. ALPIT 2007: 224-229 - [c28]Son Doan, Ai Kawazoe, Nigel Collier:
The Role of Roles in Classifying Annotated Biomedical Text. BioNLP@ACL 2007: 17-24 - [c27]Qi Wei, Yuval Krymolowski, Nigel Collier:
Towards a Methodology for Entity Error Analysis in Annotated Corpora. SAAKM 2007 - [c26]Thao Pham Thi Xuan, Ai Kawazoe, Dien Dinh, Nigel Collier, Tran Quoc Tri:
Construction of a Vietnamese Corpora for Named Entity Recognition. RIAO 2007: 719-724 - [e3]Siegfried Handschuh, Nigel Collier, Tudor Groza, Rose Dieng, Michael Sintek, Anita de Waard:
Proceedings of the Semantic Authoring, Annotation and Knowledge Markup Workshop (SAAKM2007) located at the 4th International Conference on Knowledge Capture (KCap 2007), Whistler, British Columbia, Canada, October 28-31, 2007. CEUR Workshop Proceedings 289, CEUR-WS.org 2007 [contents] - 2006
- [j9]Nigel Collier, Adeline Nazarenko, Robert H. Baud, Patrick Ruch:
Recent advances in natural language processing for biomedical applications. Int. J. Medical Informatics 75(6): 413-417 (2006) - [j8]Yoko Mizuta, Anna Korhonen, Tony Mullen, Nigel Collier:
Zone analysis in biology articles as a basis for information extraction. Int. J. Medical Informatics 75(6): 468-487 (2006) - [j7]Nigel Collier, Ai Kawazoe, Lihua Jin, Mika Shigematsu, Dinh Dien, Roberto A. Barrero, Koichi Takeuchi, Asanee Kawtrakul:
A multilingual ontology for infectious disease surveillance: rationale, design and challenges. Lang. Resour. Evaluation 40(3-4): 405-413 (2006) - [c25]Anna Korhonen, Yuval Krymolowski, Nigel Collier:
Automatic Classification of Verbs in Biomedical Texts. ACL 2006 - [c24]Ai Kawazoe, Lihua Jin, Mika Shigematsu, Roberto A. Barrero, Kiyosu Taniguchi, Nigel Collier:
The Development of a Schema for the Annotation of Terms in the Biocaster Disease Detecting/Tracking System. KR-MED 2006 - 2005
- [j6]Koichi Takeuchi, Nigel Collier:
Bio-medical entity extraction using support vector machines. Artif. Intell. Medicine 33(2): 125-137 (2005) - [j5]Tony Mullen, Yoko Mizuta, Nigel Collier:
A baseline feature set for learning rhetorical zones using full articles in the biomedical domain. SIGKDD Explor. 7(1): 52-58 (2005) - [c23]Yacov Kogan, Nigel Collier, Serguei V. S. Pakhomov, Michael Krauthammer:
Towards Semantic Role Labeling & IE in the Medical Literature. AMIA 2005 - [c22]Tuangthong Wattarujeekrit, Nigel Collier:
Exploring Predicate-Argument Relations for Named Entity Recognition in the Molecular Biology Domain. Discovery Science 2005: 267-280 - 2004
- [j4]Tuangthong Wattarujeekrit, Parantu K. Shah, Nigel Collier:
PASBio: predicate-argument structures for event extraction in molecular biology. BMC Bioinform. 5: 155 (2004) - [j3]Nigel Collier, Koichi Takeuchi:
Comparison of character-level and part of speech features for name recognition in biomedical texts. J. Biomed. Informatics 37(6): 423-435 (2004) - [j2]Elham Andaroodi, Frédéric Andrès, Nigel Collier, Kinji Ono, Pierre Lebigre:
A Visual Lexical Model of Caravanserais of Silk Roads, A Tool for Semantic Access to Architectural 3D Data. J. Digit. Inf. Manag. 2(4): 151-160 (2004) - [c21]Tony Mullen, Nigel Collier:
Incorporating topic information into semantic analysis models. ACL (Poster and Demonstration) 2004 - [c20]Nigel Collier, Jin-Dong Kim:
Introduction to the Bio-entity Recognition Task at JNLPBA. NLPBA/BioNLP 2004 - [c19]Yoko Mizuta, Nigel Collier:
Zone Identification in Biology Articles as a Basis for Information Extraction. NLPBA/BioNLP 2004 - [c18]Tony Mullen, Nigel Collier:
Sentiment Analysis using Support Vector Machines with Diverse Information Sources. EMNLP 2004: 412-418 - [c17]Ai Kawazoe, Asanobu Kitamoto, Nigel Collier:
Annotation of Coreference Relations Among Linguistic Expressions and Images in Biological Articles. LREC 2004 - [c16]Yoko Mizuta, Nigel Collier:
An Annotation Scheme for a Rhetorical Analysis of Biology Articles. LREC 2004 - [c15]Ai Kawazoe, Asanobu Kitamoto, Nigel Collier:
Managing the semantics of coreference relations with Open Ontology Forge. SemAnnot@ISWC 2004 - [c14]Tuangthong Wattarujeekrit, Nigel Collier:
Integrating Event Frame Annotation into the Open Ontology Forge Annotation Tool. SemAnnot@ISWC 2004 - [e2]Nigel Collier, Patrick Ruch, Adeline Nazarenko:
Proceedings of the International Joint Workshop on Natural Language Processing in Biomedicine and its Applications, NLPBA/BioNLP 2004, Geneva, Switzerland, August 28-29, 2004. 2004 [contents] - 2003
- [c13]Koichi Takeuchi, Nigel Collier:
Bio-Medical Entity Extraction using Support Vector Machines. BioNLP@ACL 2003: 57-64 - [c12]Nigel Collier, Koichi Takeuchi, Ai Kawazoe, Tony Mullen, Tuangthong Wattarujeekrit:
A Framework for Integrating Deep and Shallow Semantic Structures in Text Mining. KES 2003: 824-834 - 2002
- [c11]Koichi Takeuchi, Nigel Collier:
Use of Support Vector Machines in Extended Named Entity Recognition. CoNLL 2002 - [c10]Nigel Collier, Koichi Takeuchi:
PIA-Core: Semantic Annotation through Example-based Learning. LREC 2002 - [c9]Nigel Collier, Koichi Takeuchi, Chikashi Nobata, Junichi Fukumoto, Norihiro Ogata:
Progress on Multi-lingual Named Entity Annotation Guidelines using RDF (S). LREC 2002 - [e1]Siegfried Handschuh, Nigel Collier, Rose Dieng, Steffen Staab:
Proceedings of the ECAI 2002 Workshop on Semantic Authoring, Annotation & Knowledge Markup, SAAKM@ECAI 2002, Lyon, France, July 22-26, 2002. CEUR Workshop Proceedings 100, CEUR-WS.org 2002 [contents] - 2001
- [j1]Gareth J. F. Jones, Nigel Collier, Tetsuya Sakai, Kazuo Sumita, Hideki Hirakawa:
A Framework for Cross-Language Information Access: Application to English and Japanese. Comput. Humanit. 35(4): 371-388 (2001) - [c8]Nigel Collier:
Machine Learning for Information Extraction from XML marked-up text on the Semantic Web. SemWeb 2001 - 2000
- [c7]Yuka Tateisi, Tomoko Ohta, Nigel Collier, Chikashi Nobata, Jun'ichi Tsujii:
Building an Annotated Corpus in the Molecular-Biology Domain. SAIC@COLING 2000: 28-34 - [c6]Nigel Collier, Chikashi Nobata, Jun'ichi Tsujii:
Extracting the Names of Genes and Gene Products with a Hidden Markov Model. COLING 2000: 201-207
1990 – 1999
- 1999
- [c5]Nigel Collier, Hyun Seok Park, Norihiro Ogata, Yuka Tateishi, Chikashi Nobata, Tomoko Ohta, Tateshi Sekimizu, Hisao Imai, Katsutoshi Ibushi, Jun'ichi Tsujii:
The GENIA project: corpus-based knowledge acquisition and information extraction from genome research papers. EACL 1999: 271-272 - [c4]Gareth J. F. Jones, Tetsuya Sakai, Nigel Collier, Akira Kumano, Kazuo Sumita:
A Comparison of Query Translation Methods for English-Japanese Cross-Language Information Retrieval (poster abstract). SIGIR 1999: 269-270 - 1998
- [c3]Nigel Collier, Hideki Hirakawa, Akira Kumano:
Machine Translation versus Dictionary Term Translation - A Comparison for English-Japanese News Article Alignment. COLING-ACL 1998: 263-267 - [c2]Nigel Collier, Kenji Ono, Hideki Hirakawa:
An Experiment in Hybrid Dictionary and Statistical Sentence Alignment. COLING-ACL 1998: 268-274 - 1997
- [c1]Nigel Collier:
Convergence Time Characteristics of an Associative Memory for Natural Language Processing. IJCAI 1997: 1106-1113 - 1996
- [i1]Nigel Collier:
Storage of Natural Language Sentences in a Hopfield Network. CoRR cmp-lg/9608001 (1996)
Coauthor Index
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