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Jeffrey D. Parvin
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2010 – 2019
- 2015
- [c7]Ayat Hatem, Kamer Kaya, Jeffrey D. Parvin, Kun Huang, Ümit V. Çatalyürek:
MICA: MicroRNA integration for active module discovery. BCB 2015: 136-145 - 2014
- [j6]David A. Liebner, Kun Huang, Jeffrey D. Parvin:
MMAD: microarray microdissection with analysis of differences is a computational tool for deconvoluting cell type-specific contributions from tissue samples. Bioinform. 30(5): 682-689 (2014) - [c6]Amy Webb, Aaron Albin, Zhan Ye, Majid Rastegar-Mojarad, Kun Huang, Jeffrey D. Parvin, Wolfgang Sadee, Lang Li, Simon M. Lin, Yang Xiang:
Mining massive SNP data for identifying associated SNPs and uncovering gene relationships. BCB 2014: 304-313 - 2013
- [j5]Jie Zhang, Shiwei Ni, Yang Xiang, Jeffrey D. Parvin, Yufeng Yang, Yongjian Zhou, Kun Huang:
Gene co-expression analysis predicts genetic aberration loci associated with colon cancer metastasis. Int. J. Comput. Biol. Drug Des. 6(1/2): 60-71 (2013) - 2012
- [j4]Jie Zhang, Kewei Lu, Yang Xiang, Muhtadi Islam, Shweta Kotian, Zeina Kais, Cindy Lee, Mansi Arora, Hui-wen Liu, Jeffrey D. Parvin, Kun Huang:
Weighted Frequent Gene Co-expression Network Mining to Identify Genes Involved in Genome Stability. PLoS Comput. Biol. 8(8) (2012) - 2011
- [j3]Hatice Gulcin Ozer, Yi-Wen Huang, Jiejun Wu, Jeffrey D. Parvin, Tim Hui-Ming Huang, Kun Huang:
Comparing Multiple Chip-Sequencing Experiments. J. Bioinform. Comput. Biol. 9(2): 269-282 (2011) - [c5]Jie Zhang, Thomas Knobloch, Jeffrey D. Parvin, Christopher Weghorst, Kun Huang:
Identifying smoking associated gene co-expression networks related to oral cancer initiation. BIBM Workshops 2011: 1039-1041 - [c4]Jie Zhang, Shiwei Ni, Jeffrey D. Parvin, Yufeng Yang, Kun Huang:
Predicting Parkinson's disease related genes using frequent gene co-expression analysis. BIBM Workshops 2011: 1042-1044 - 2010
- [j2]Fei Gu, Hang-Kai Hsu, Pei-Yin Hsu, Jiejun Wu, Yilin Ma, Jeffrey D. Parvin, Tim Hui-Ming Huang, Victor X. Jin:
Inference of hierarchical regulatory network of estrogen-dependent breast cancer through ChIP-based data. BMC Syst. Biol. 4: 170 (2010)
2000 – 2009
- 2009
- [j1]Cenny Taslim, Jiejun Wu, Pearlly Yan, Greg Singer, Jeffrey D. Parvin, Tim Hui-Ming Huang, Shili Lin, Kun Huang:
Comparative study on ChIP-seq data: normalization and binding pattern characterization. Bioinform. 25(18): 2334-2340 (2009) - [c3]Terry Camerlengo, Hatice Gulcin Ozer, Pearlly Yan, Jeffrey D. Parvin, Tim Hui-Ming Huang, Kun Huang, Mingxiang Teng, Lang Li, Yunlong Liu, Francisco Perez, Tahsin M. Kurç:
Enabling Data Analysis on High-Throughput Data in Large Data Depository Using Web-Based Analysis Platform - A Case Study on Integrating QUEST with GenePattern in Epigenetics Research. BIBM 2009: 392-395 - [c2]Doruk Bozdag, Jeffrey D. Parvin, Ümit V. Çatalyürek:
A Biclustering Method to Discover Co-regulated Genes Using Diverse Gene Expression Datasets. BICoB 2009: 151-163 - [c1]Hatice Gulcin Ozer, Doruk Bozdag, Terry Camerlengo, Jiejun Wu, Yi-Wen Huang, Timothy D. R. Hartley, Jeffrey D. Parvin, Tim Hui-Ming Huang, Ümit V. Çatalyürek, Kun Huang:
A Comprehensive Analysis Workflow for Genome-Wide Screening Data from ChIP-Sequencing Experiments. BICoB 2009: 320-330
Coauthor Index
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