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Björn Sommer 0001
Person information

- affiliation: Royal College of Art, London, United Kingdom
- affiliation: Bielefeld University, Bio-/Medical Informatics Department, Germany
- affiliation: University of Konstanz, Computational Life Sciences, Germany
- affiliation: Monash University, Faculty of Information Technology, Melbourne, Australia
Other persons with the same name
- Björn Sommer 0002 — Drees & Sommer, Cologne, Germany
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2020 – today
- 2022
- [j27]Matthias Kraus
, Johannes Fuchs, Björn Sommer, Karsten Klein, Ulrich Engelke, Daniel A. Keim, Falk Schreiber:
Immersive Analytics with Abstract 3D Visualizations: A Survey. Comput. Graph. Forum 41(1): 201-229 (2022) - 2021
- [j26]Jan Byska, Michael Krone, Bjorn Sommer:
Foreword to the special section on molecular graphics and visual analysis of molecular data (MolVA 2021). Comput. Graph. 99: 7- (2021) - [j25]Falk Schreiber, Padraig Gleeson, Martin Golebiewski, Thomas E. Gorochowski, Michael Hucka, Sarah M. Keating
, Matthias König
, Chris J. Myers, David P. Nickerson, Björn Sommer, Dagmar Waltemath
:
Specifications of standards in systems and synthetic biology: status and developments in 2021. J. Integr. Bioinform. 18(3) (2021) - [j24]Karsten Klein
, Michael Aichem, Ying Zhang, Stefan Erk, Björn Sommer, Falk Schreiber:
TEAMwISE: synchronised immersive environments for exploration and analysis of animal behaviour. J. Vis. 24(4): 845-859 (2021) - [e4]Steffen Oeltze-Jafra, Noeska N. Smit, Björn Sommer, Kay Nieselt, Thomas Schultz:
VCBM 2021: 11th Eurographics Workshop on Visual Computing for Biology and Medicine, Paris, France, 22-24 September 2021. Eurographics Association 2021 [contents] - 2020
- [j23]Falk Schreiber, Björn Sommer, Tobias Czauderna
, Martin Golebiewski, Thomas E. Gorochowski, Michael Hucka
, Sarah M. Keating, Matthias König, Chris J. Myers, David P. Nickerson
, Dagmar Waltemath
:
Specifications of standards in systems and synthetic biology: status and developments in 2020. J. Integr. Bioinform. 17(2-3) (2020) - [c13]Nurul 'Ayn Ahmad Sayuti, Bjorn Sommer, Saeema Ahmed-Kristensen:
Bio-related Design Genres: A Survey on Familiarity and Potential Applications. ArtsIT 2020: 379-393 - [c12]Zidong Lin
, Bjorn Sommer
, Saeema Ahmed-Kristensen
:
IoT Product Pleasurability - Investigating the Pleasurable User Experiences Between Conventional Products and IoT Products Through Watches. ArtsIT 2020: 394-408 - [c11]Beatrice Giuliari, Manuel Kösters, Jan Zhou, Tim Dingersen, André J. Heissmann, Ralf Rotzoll, Jens Krüger, Alejandro Giorgetti, Björn Sommer:
The Vesicle Builder - A Membrane Packing Algorithm for the CELLmicrocosmos MembraneEditor. MolVa@Eurographics/EuroVis 2020: 7-15 - [e3]Jan Byska, Michael Krone, Björn Sommer:
3rd Workshop on Molecular Graphics and Visual Analysis of Molecular Data, MolVA@Eurographics/EuroVis 2020, Norrköping, Sweden, May 25, 2020 [online only]. Eurographics Association 2020, ISBN 978-3-03868-114-4 [contents]
2010 – 2019
- 2019
- [j22]Falk Schreiber, Björn Sommer, Gary D. Bader, Padraig Gleeson
, Martin Golebiewski, Michael Hucka
, Sarah M. Keating
, Matthias König
, Chris J. Myers
, David P. Nickerson
, Dagmar Waltemath
:
Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2019. J. Integr. Bioinform. 16(2) (2019) - [j21]Björn Sommer:
The CELLmicrocosmos Tools: A Small History of Java-Based Cell and Membrane Modelling Open Source Software Development. J. Integr. Bioinform. 16(3) (2019) - [j20]Marcel Friedrichs
, Alban Shoshi, Piotr Chmura
, Jon C. Ison, Veit Schwämmle
, Falk Schreiber, Ralf Hofestädt, Björn Sommer:
JIB.tools 2.0 - A Bioinformatics Registry for Journal Published Tools with Interoperability to bio.tools. J. Integr. Bioinform. 16(4) (2019) - [c10]Bjorn Sommer, Stefan P. Feyer, Daniel Klinkhammer, Karsten Klein, Jonathan Wieland, Daniel Immanuel Fink, Wolfgang Fiedler, Andrea Flack, Máté Nagy, Martin Wikelski, Harald Reiterer, Falk Schreiber:
BinocularsVR - A VR experience for the exhibition "From Lake Constance to Africa, a long distance travel with ICARUS". ERVR 2019 - [c9]Karsten Klein, Michael Aichem, Björn Sommer, Stefan Erk, Ying Zhang, Falk Schreiber:
TEAMwISE: Synchronised Immersive Environments for Exploration and Analysis of Movement Data. VINCI 2019: 9:1-9:5 - [e2]Jan Byska, Michael Krone, Björn Sommer:
2nd Workshop on Molecular Graphics and Visual Analysis of Molecular Data, MolVA@EuroVis 2019, Porto, Portugal, June 3, 2019. Eurographics Association 2019, ISBN 978-3-03868-085-7 [contents] - 2018
- [j19]Falk Schreiber, Gary D. Bader, Padraig Gleeson, Martin Golebiewski, Michael Hucka
, Sarah M. Keating
, Nicolas Le Novère, Chris J. Myers, David P. Nickerson, Björn Sommer, Dagmar Waltemath:
Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2017. J. Integr. Bioinform. 15(1) (2018) - [j18]Niklas Biere
, Mehmood Ghaffar, Anja Doebbe, Daniel Jäger, Nils Rothe, Benjamin M. Friedrich, Ralf Hofestädt, Falk Schreiber, Olaf Kruse
, Björn Sommer:
Heuristic Modeling and 3D Stereoscopic Visualization of a Chlamydomonas reinhardtii Cell. J. Integr. Bioinform. 15(2) (2018) - [j17]Björn Sommer, Marc Baaden, Michael Krone
, Andrew J. Woods
:
From Virtual Reality to Immersive Analytics in Bioinformatics. J. Integr. Bioinform. 15(2) (2018) - [c8]Artur Baltabayev, Alexej Gluschkow, Johannes Blank, Gero Birkhölzer, Jean Büsche, Martin Kern, Fabian Klopfer, Lisa-Maria Mayer, Gabriel Scheibler, Karsten Klein, Falk Schreiber, Björn Sommer:
Virtual Reality for Sensor Data Visualization and Analysis. ERVR 2018 - [c7]Yunlong Wang
, Corinna Breitinger, Björn Sommer, Falk Schreiber, Harald Reiterer:
Comparing Sequential and Temporal Patterns from Human Mobility Data for Next-Place Prediction. UMAP (Adjunct Publication) 2018: 157-164 - [c6]Mehmood Ghaffar, Niklas Biere, Daniel Jäger, Karsten Klein, Falk Schreiber, Olaf Kruse, Björn Sommer:
3D Modelling and Visualisation of Heterogeneous Cell Membranes in Blender. VINCI 2018: 64-71 - [p2]Tobias Czauderna
, Jason Haga, Jinman Kim, Matthias Klapperstück, Karsten Klein, Torsten W. Kuhlen, Steffen Oeltze-Jafra, Björn Sommer, Falk Schreiber:
Immersive Analytics Applications in Life and Health Sciences. Immersive Analytics 2018: 289-330 - [e1]Jan Byska, Michael Krone, Björn Sommer:
1st Workshop on Molecular Graphics and Visual Analysis of Molecular Data, MolVA@EuroVis 2018, Brno, Czech Republic, June 4, 2018. Eurographics Association 2018, ISBN 978-3-03868-061-1 [contents] - [i1]Yunlong Wang, Björn Sommer, Falk Schreiber, Harald Reiterer:
Clustering with Temporal Constraints on Spatio-Temporal Data of Human Mobility. CoRR abs/1807.00546 (2018) - 2017
- [j16]Björn Sommer, Falk Schreiber:
Integration and virtual reality exploration of biomedical data with CmPI and VANTED. it Inf. Technol. 59(4): 181 (2017) - [j15]Ralf Hofestädt, Falk Schreiber, Björn Sommer, Jens Allmer:
Computational miRNomics - Integrative Approaches. J. Integr. Bioinform. 14(1) (2017) - [c5]Hieu T. Nim, Björn Sommer, Karsten Klein, Andrea Flack, Kamran Safi
, Máté Nagy, Wolfgang Fiedler, Martin Wikelski, Falk Schreiber:
Design Considerations for Immersive Analytics of Bird Movements Obtained by Miniaturised GPS Sensors. VCBM 2017: 27-31 - 2016
- [j14]Falk Schreiber, Gary D. Bader
, Padraig Gleeson
, Martin Golebiewski, Michael Hucka
, Nicolas Le Novère, Chris J. Myers, David P. Nickerson
, Björn Sommer, Dagmar Waltemath:
Specifications of Standards in Systems and Synthetic Biology: Status and Developments in 2016. J. Integr. Bioinform. 13(3) (2016) - [j13]Gökhan Kovanci, Mehmood Ghaffar, Björn Sommer:
Web-based hybrid-dimensional Visualization and Exploration of Cytological Localization Scenarios. J. Integr. Bioinform. 13(4) (2016) - [j12]Qilin Li
, Yincong Zhou, Yingmin Jiao, Zhao Zhang, Lin Bai, Li Tong, Xiong Yang, Björn Sommer, Ralf Hofestädt, Ming Chen
:
DaTo: an atlas of biological databases and tools. J. Integr. Bioinform. 13(4) (2016) - [c4]Hieu T. Nim, Mengyang Wang, Yujie Zhu, Björn Sommer, Falk Schreiber, Sarah E. Boyd, Stephen Jia Wang
:
Communicating the Effect of Human Behaviour on the Great Barrier Reef via Mixed Reality Visualisation. BDVA 2016: 1-6 - 2015
- [j11]Falk Schreiber, Gary D. Bader
, Martin Golebiewski
, Michael Hucka
, Benjamin Kormeier, Nicolas Le Novère, Chris J. Myers
, David P. Nickerson
, Björn Sommer, Dagmar Waltemath, Stephan Weise
:
Specifications of Standards in Systems and Synthetic Biology. J. Integr. Bioinform. 12(2) (2015) - [c3]Björn Sommer, Stephen Jia Wang
, Lifeng Xu, Ming Chen
, Falk Schreiber:
Hybrid-Dimensional Visualization and Interaction - Integrating 2D and 3D Visualization with Semi-Immersive Navigation Techniques. BDVA 2015: 65-72 - 2014
- [j10]Gunther Lukat, Björn Sommer, Jens Krüger:
Membrane simulation analysis using Voronoi tessellation. J. Cheminformatics 6(S-1): 23 (2014) - [j9]Björn Sommer, Christian Bender, Tobias Hoppe, Christian Gamroth, Lukas Jelonek:
Stereoscopic cell visualization: from mesoscopic to molecular scale. J. Electronic Imaging 23(1): 011007 (2014) - [c2]Thomas Waltemate, Björn Sommer, Mario Botsch
:
Membrane Mapping: Combining Mesoscopic and Molecular Cell Visualization. VCBM 2014: 89-96 - [p1]Björn Sommer:
Network Analysis and Integration in a Virtual Cell Environment. Approaches in Integrative Bioinformatics 2014: 275-297 - 2013
- [b1]Björn Sommer:
CELLmicrocosmos - Integrative cell modeling at the molecular, mesoscopic and functional level. Bielefeld University, 2013 - [j8]Björn Sommer, Benjamin Kormeier, Pavel Demenkov
, Patrizio Arrigo
, Klaus Hippe, Özgür Ates, Alexey V. Kochetov, Vladimir A. Ivanisenko
, Nikolay A. Kolchanov
, Ralf Hofestädt:
Subcellular Localization Charts: a New Visual Methodology for the Semi-Automatic Localization of protein-Related Data Sets. J. Bioinform. Comput. Biol. 11(1) (2013) - [j7]Gunther Lukat, Jens Krüger
, Björn Sommer:
APL@Voro: A Voronoi-Based Membrane Analysis Tool for GROMACS Trajectories. J. Chem. Inf. Model. 53(11): 2908-2925 (2013) - [j6]Ralf Hofestädt, Benjamin Kormeier, Matthias Lange, Falk Schreiber, Björn Sommer, Stephan Weise
:
Editorial. J. Integr. Bioinform. 10(1) (2013) - 2012
- [j5]Sebastian Rubert, Christian Gamroth, André J. Heissmann, Gunther Lukat, Ralf Rotzoll, Alexander Schäfer, Jens Krüger, Björn Sommer:
The GMX-Plugin for the CELLmicrocosmos MembraneEditor. J. Cheminformatics 4(S-1): 49 (2012) - 2011
- [j4]Björn Sommer, Tim Dingersen, Christian Gamroth, André J. Heissmann, Gunther Lukat, Ralf Rotzoll, Sebastian Rubert, Alexander Schäfer, Jens Krüger
:
Coarse-grained and all-atom MD simulations with Gromacs based on CELLmicrocosmos 2.2 model membranes. J. Cheminformatics 3(S-1): 43 (2011) - [j3]Björn Sommer, Tim Dingersen, Christian Gamroth, Sebastian Schneider, Sebastian Rubert, Jens Krüger
, Karl-Josef Dietz:
CELLmicrocosmos 2.2 MembraneEditor: A Modular Interactive Shape-Based Software Approach To Solve Heterogeneous Membrane Packing Problems. J. Chem. Inf. Model. 51(5): 1165-1182 (2011) - 2010
- [j2]Björn Sommer, Tim Dingersen, Sebastian Schneider, Sebastian Rubert, Christian Gamroth:
CELLmicrocosmos 2.2: advancements and applications in modeling of three-dimensional PDB membranes. J. Cheminformatics 2(S-1): 21 (2010) - [j1]Björn Sommer, Evgeny S. Tiys, Benjamin Kormeier, Klaus Hippe, Sebastian Janowski, Timofey V. Ivanisenko, Anatoly O. Bragin, Patrizio Arrigo
, Pavel Demenkov
, Alexey V. Kochetov, Vladimir A. Ivanisenko, Nikolay A. Kolchanov, Ralf Hofestädt:
Visualization and Analysis of a Cardio Vascular Disease- and MUPP1-related Biological Network combining Text Mining and Data Warehouse Approaches. J. Integr. Bioinform. 7(1) (2010) - [c1]Björn Sommer, Jörn Künsemöller, Norbert Sand, Arne Husemann, Madis Rumming, Benjamin Kormeier:
CELLmicrocosmos 4.1 - An Interactive Approach to Integrating Spatially Localized Metabolic Networks into a Virtual 3D Cell Environment. BIOINFORMATICS 2010: 90-95
Coauthor Index

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last updated on 2022-05-16 23:37 CEST by the dblp team
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