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Yana Bromberg
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2020 – today
- 2022
- [j22]Ariel A. Aptekmann, J. Buongiorno, D. Giovannelli, M. Glamoclija, Diego U. Ferreiro, Yana Bromberg:
mebipred: identifying metal-binding potential in protein sequence. Bioinform. 38(14): 3532-3540 (2022) - 2021
- [j21]Michael Bernhofer, Christian Dallago, Timothy Karl, Venkata P. Satagopam, Michael Heinzinger, Maria Littmann, Tobias Olenyi, Jiajun Qiu, Konstantin Schütze, Guy Yachdav, Haim Ashkenazy, Nir Ben-Tal, Yana Bromberg, Tatyana Goldberg, László Kaján, Seán I. O'Donoghue, Chris Sander, Andrea Schafferhans, Avner Schlessinger, Gerrit Vriend, Milot Mirdita, Piotr Gawron, Wei Gu, Yohan Jarosz, Christophe Trefois, Martin Steinegger, Reinhard Schneider, Burkhard Rost:
PredictProtein - Predicting Protein Structure and Function for 29 Years. Nucleic Acids Res. 49(Webserver-Issue): 535-540 (2021) - 2020
- [j20]Hesham ElAbd, Yana Bromberg, Adrienne Hoarfrost, Tobias Lenz, Andre Franke, Mareike Wendorff:
Amino acid encoding for deep learning applications. BMC Bioinform. 21(1): 235 (2020)
2010 – 2019
- 2019
- [j19]Yana Bromberg, Nadia El-Mabrouk, Predrag Radivojac:
ISMB/ECCB 2019 Proceedings. Bioinform. 35(14): i1-i2 (2019) - 2018
- [j18]Yana Bromberg, Predrag Radivojac:
ISMB 2018 proceedings. Bioinform. 34(13): i2-i3 (2018) - [j17]Yannick Mahlich, Martin Steinegger, Burkhard Rost, Yana Bromberg:
HFSP: high speed homology-driven function annotation of proteins. Bioinform. 34(13): i304-i312 (2018) - [j16]Chengsheng Zhu, Yannick Mahlich, Maximilian Miller, Yana Bromberg:
fusionDB: assessing microbial diversity and environmental preferences via functional similarity networks. Nucleic Acids Res. 46(Database-Issue): D1283 (2018) - [j15]Chengsheng Zhu, Yannick Mahlich, Maximilian Miller, Yana Bromberg:
fusionDB: assessing microbial diversity and environmental preferences via functional similarity networks. Nucleic Acids Res. 46(Database-Issue): D535-D541 (2018) - [j14]Jason E. McDermott, Matthew Partridge, Yana Bromberg:
Ten simple rules for drawing scientific comics. PLoS Comput. Biol. 14(1) (2018) - 2017
- [j13]Niko Beerenwinkel, Yana Bromberg:
ISMB/ECCB 2017 proceedings. Bioinform. 33(14): i1-i2 (2017) - [j12]Maximilian Miller, Chengsheng Zhu, Yana Bromberg:
clubber: removing the bioinformatics bottleneck in big data analyses. J. Integr. Bioinform. 14(2) (2017) - [c3]Yana Bromberg, Matthew W. Hahn, Predrag Radivojac:
Session Introduction. PSB 2017: 1-2 - [e1]Xiaohua Hu, Chi-Ren Shyu, Yana Bromberg, Jean Gao, Yang Gong, Dmitry Korkin, Illhoi Yoo, Huiru Jane Zheng:
2017 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2017, Kansas City, MO, USA, November 13-16, 2017. IEEE Computer Society 2017, ISBN 978-1-5090-3050-7 [contents] - 2016
- [j11]Jonas Reeb, Maximilian Hecht, Yannick Mahlich, Yana Bromberg, Burkhard Rost:
Predicted Molecular Effects of Sequence Variants Link to System Level of Disease. PLoS Comput. Biol. 12(8) (2016) - [c2]Casey S. Greene, James A. Foster, Bruce A. Stanton, Deborah A. Hogan, Yana Bromberg:
Computational Approaches to Study Microbes and Microbiomes. PSB 2016: 557-565 - 2015
- [j10]Yana Bromberg, Emidio Capriotti:
Editor's Choice: SNP-SIG 2013: the state of the art of genomic variant interpretation. Bioinform. 31(3): 449-450 (2015) - [j9]Chengsheng Zhu, Tom O. Delmont, Timothy M. Vogel, Yana Bromberg:
Functional Basis of Microorganism Classification. PLoS Comput. Biol. 11(8) (2015) - 2014
- [j8]Guy Yachdav, Edda Kloppmann, László Kaján, Maximilian Hecht, Tatyana Goldberg, Tobias Hamp, Peter Hönigschmid, Andrea Schafferhans, Manfred Roos, Michael Bernhofer, Lothar Richter, Haim Ashkenazy, Marco Punta, Avner Schlessinger, Yana Bromberg, Reinhard Schneider, Gerrit Vriend, Chris Sander, Nir Ben-Tal, Burkhard Rost:
PredictProtein - an open resource for online prediction of protein structural and functional features. Nucleic Acids Res. 42(Webserver-Issue): 337-343 (2014) - 2013
- [j7]Yana Bromberg:
Chapter 15: Disease Gene Prioritization. PLoS Comput. Biol. 9(4) (2013) - [j6]Jeroen de Ridder, Yana Bromberg, Magali Michaut, Venkata P. Satagopam, Manuel Corpas, Geoff MacIntyre, Theodore Alexandrov:
The Young PI Buzz: Learning from the Organizers of the Junior Principal Investigator Meeting at ISMB-ECCB 2013. PLoS Comput. Biol. 9(11) (2013) - 2012
- [j5]Emidio Capriotti, Nathan L. Nehrt, Maricel G. Kann, Yana Bromberg:
Bioinformatics for personal genome interpretation. Briefings Bioinform. 13(4): 495-512 (2012) - [j4]Christian Schaefer, Alice Meier, Burkhard Rost, Yana Bromberg:
SNPdbe: constructing an nsSNP functional impacts database. Bioinform. 28(4): 601-602 (2012) - 2010
- [j3]Gilad Wainreb, Haim Ashkenazy, Yana Bromberg, Alina Starovolsky-Shitrit, Turkan Haliloglu, Eytan Ruppin, Karen B. Avraham, Burkhard Rost, Nir Ben-Tal:
MuD: an interactive web server for the prediction of non-neutral substitutions using protein structural data. Nucleic Acids Res. 38(Web-Server-Issue): 523-528 (2010)
2000 – 2009
- 2009
- [j2]Yana Bromberg, Burkhard Rost:
Correlating protein function and stability through the analysis of single amino acid substitutions. BMC Bioinform. 10(S-8): 8 (2009) - 2008
- [j1]Yana Bromberg, Guy Yachdav, Burkhard Rost:
SNAP predicts effect of mutations on protein function. Bioinform. 24(20): 2397-2398 (2008) - [c1]Yana Bromberg, Burkhard Rost:
Comprehensive in silico mutagenesis highlights functionally important residues in proteins. ECCB 2008: 207-212
Coauthor Index
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