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Alan M. Friedman
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Publications
- 2012
- [j5]Lu He, Alan M. Friedman, Chris Bailey-Kellogg:
Algorithms for optimizing cross-overs in DNA shuffling. BMC Bioinform. 13(S-3): S3 (2012) - 2011
- [j4]Fei Xiong, Alan M. Friedman, Chris Bailey-Kellogg:
Planning combinatorial disulfide cross-links for protein fold determination. BMC Bioinform. 12(S-12): S5 (2011) - [c5]Lu He, Alan M. Friedman, Chris Bailey-Kellogg:
Algorithms for optimizing cross-overs in DNA shuffling. BCB 2011: 143-152 - [c4]K. S. M. Tozammel Hossain
, Chris Bailey-Kellogg, Alan M. Friedman, Michael J. Bradley, Nathan Baker
, Naren Ramakrishnan:
Using physicochemical properties of amino acids to induce graphical models of residue couplings. BIOKDD 2011: 3:1-3:10 - 2010
- [j3]Paritosh A. Kavathekar, Bruce A. Craig
, Alan M. Friedman, Chris Bailey-Kellogg, Devin J. Balkcom:
Characterizing the Space of interatomic Distance Distribution Functions Consistent with Solution Scattering Data. J. Bioinform. Comput. Biol. 8(2): 315-335 (2010) - 2009
- [j2]Wei Zheng, Alan M. Friedman, Chris Bailey-Kellogg:
Algorithms for Joint Optimization of Stability and Diversity in Planning Combinatorial Libraries of Chimeric Proteins. J. Comput. Biol. 16(8): 1151-1168 (2009) - 2008
- [c3]Wei Zheng, Alan M. Friedman, Chris Bailey-Kellogg:
Algorithms for Joint Optimization of Stability and Diversity in Planning Combinatorial Libraries of Chimeric Proteins. RECOMB 2008: 300-314 - 2007
- [j1]Xiaoduan Ye, Alan M. Friedman, Chris Bailey-Kellogg:
Hypergraph Model of Multi-Residue Interactions in Proteins: Sequentially-Constrained Partitioning Algorithms for Optimization of Site-Directed Protein Recombination. J. Comput. Biol. 14(6): 777-790 (2007) - 2006
- [c2]Xiaoduan Ye, Alan M. Friedman, Chris Bailey-Kellogg:
Hypergraph Model of Multi-residue Interactions in Proteins: Sequentially-Constrained Partitioning Algorithms for Optimization of Site-Directed Protein Recombination. RECOMB 2006: 15-29 - 2004
- [c1]Shobha Potluri, Aly Azeem Khan, A. Kuzminykh, Janusz M. Bujnicki, Alan M. Friedman, Chris Bailey-Kellogg:
Geometric Analysis of Cross-Linkability for Protein Fold Discrimination. Pacific Symposium on Biocomputing 2004: 447-458

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