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Journal Articles
- 2019
[j27]Roberto Preste
, Ornella Vitale, Rosanna Clima, Giuseppe Gasparre, Marcella Attimonelli:
HmtVar: a new resource for human mitochondrial variations and pathogenicity data. Nucleic Acids Res. 47(Database-Issue): D1202-D1210 (2019)- 2017
- [j26]Rosanna Clima, Roberto Preste, Claudia Calabrese, Maria Angela Diroma, Mariangela Santorsola, Gaetano Scioscia, Domenico Simone, Lishuang Shen, Giuseppe Gasparre, Marcella Attimonelli:
HmtDB 2016: data update, a better performing query system and human mitochondrial DNA haplogroup predictor. Nucleic Acids Res. 45(Database-Issue): D698-D706 (2017) - 2016
- [j25]Maria Angela Diroma, Paolo Lubisco, Marcella Attimonelli:
A comprehensive collection of annotations to interpret sequence variation in human mitochondrial transfer RNAs. BMC Bioinform. 17(S-12): 73-82 (2016) - 2014
- [j24]Claudia Calabrese, Domenico Simone, Maria Angela Diroma, Mariangela Santorsola, Cristiano Guttà, Giuseppe Gasparre, Ernesto Picardi, Graziano Pesole, Marcella Attimonelli:
MToolBox: a highly automated pipeline for heteroplasmy annotation and prioritization analysis of human mitochondrial variants in high-throughput sequencing. Bioinform. 30(21): 3115-3117 (2014) - 2012
- [j23]Francesco Maria Calabrese, Domenico Simone, Marcella Attimonelli:
Primates and mouse NumtS in the UCSC Genome Browser. BMC Bioinform. 13(S-4): S15 (2012) - [j22]Francesco Rubino, Roberta Piredda, Francesco Maria Calabrese, Domenico Simone, Martin Lang, Claudia Calabrese, Vittoria Petruzzella, Mila Tommaseo Ponzetta, Giuseppe Gasparre, Marcella Attimonelli:
HmtDB, a genomic resource for mitochondrion-based human variability studies. Nucleic Acids Res. 40(Database-Issue): 1150-1159 (2012) - 2009
- [j21]Francesco Rubino, Marcella Attimonelli:
RegExpBlasting (REB), a Regular Expression Blasting algorithm based on multiply aligned sequences. BMC Bioinform. 10(S-6) (2009) - 2005
- [j20]Marcella Attimonelli, Matteo Accetturo, Monica Santamaria, Daniela Lascaro, Gaetano Scioscia, Graziano Pappadà, Luigi Russo, Luigi Zanchetta, Mila Tommaseo Ponzetta:
HmtDB, a Human Mitochondrial Genomic Resource Based on Variability Studies Supporting Population Genetics and Biomedical Research. BMC Bioinform. 6(S-4) (2005) - 2003
- [j19]Marco Sardiello, Flavio Licciulli, Domenico Catalano, Marcella Attimonelli, Corrado Caggese:
MitoDrome: a database of Drosophila melanogaster nuclear genes encoding proteins targeted to the mitochondrion. Nucleic Acids Res. 31(1): 322-324 (2003) - 2002
- [j18]Marcella Attimonelli, Domenico Catalano, Carmela Gissi, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Monica Santamaria, Graziano Pesole, Cecilia Saccone:
MitoNuc: a database of nuclear genes coding for mitochondrial proteins. Update 2002. Nucleic Acids Res. 30(1): 172-173 (2002) - [j17]Cecilia Lanave, Flavio Licciulli, Mariateresa De Robertis, Alessandra Marolla, Marcella Attimonelli:
Update of AMmtDB: a database of multi-aligned Metazoa mitochondrial DNA sequences. Nucleic Acids Res. 30(1): 174-175 (2002) - 2000
- [j16]Marcella Attimonelli, N. Altamura, R. Benne, A. Brennicke, J. M. Cooper, Domenica D'Elia, A. de Montalvo, B. de Pinto, Mariateresa De Robertis, Pawel Golik, Volker Knoop, Cecilia Lanave, Jaga Lazowska, Flavio Licciulli, B. S. Malladi, F. Memeo, M. Monnerot, R. Pasimeni, Sandrine Pilbout, A. H. V. Schapira, P. Sloof, Cecilia Saccone:
MitBASE : a comprehensive and integrated mitochondrial DNA database. The present status. Nucleic Acids Res. 28(1): 148-152 (2000) - [j15]Cecilia Lanave, Sabino Liuni, Flavio Licciulli, Marcella Attimonelli:
Update of AMmtDB: a database of multi-aligned Metazoa mitochondrial DNA sequences. Nucleic Acids Res. 28(1): 153-154 (2000) - [j14]Graziano Pesole, Carmela Gissi, Domenico Catalano, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Marcella Attimonelli, Cecilia Saccone:
MitoNuc and MitoAln: two related databases of nuclear genes coding for mitochondrial proteins. Nucleic Acids Res. 28(1): 163-165 (2000) - [j13]Domenico Catalano, Flavio Licciulli, Domenica D'Elia, Marcella Attimonelli:
Update of KEYnet: a gene and protein names database for biosequences functional organisation. Nucleic Acids Res. 28(1): 372-373 (2000) - 1999
- [j12]Marcella Attimonelli, N. Altamura, R. Benne, C. Boyen, A. Brennicke, A. Carone, J. M. Cooper, Domenica D'Elia, A. de Montalvo, B. de Pinto, Mariateresa De Robertis, Pawel Golik, J. M. Grienenberger, Volker Knoop, Cecilia Lanave, Jaga Lazowska, A. Lemagnen, B. S. Malladi, F. Memeo, M. Monnerot, Sandrine Pilbout, A. H. V. Schapira, P. Sloof, Piotr P. Slonimski, K. Stevens, Cecilia Saccone:
MitBASE: a comprehensive and integrated mitochondrial DNA database. Nucleic Acids Res. 27(1): 128-133 (1999) - [j11]Cecilia Lanave, Marcella Attimonelli, Mariateresa De Robertis, Flavio Licciulli, Sabino Liuni, Elisabetta Sbisà, Cecilia Saccone:
Update of AMmtDB: a database of multi-aligned metazoa mitochondrial DNA sequences. Nucleic Acids Res. 27(1): 134-137 (1999) - [j10]Marcella Attimonelli, J. M. Cooper, Domenica D'Elia, A. de Montalvo, Mariateresa De Robertis, Heikki Lehväslaiho, S. B. Malladi, F. Memeo, K. Stevens, A. H. V. Schapira, Cecilia Saccone:
Update of the Human MitBASE database. Nucleic Acids Res. 27(1): 143-146 (1999) - [j9]A. Carone, S. B. Malladi, Marcella Attimonelli, Cecilia Saccone:
Vertebrate MitBASE: a specialised database on vertebrate mitochondrial DNA sequences. Nucleic Acids Res. 27(1): 150-152 (1999) - [j8]Flavio Licciulli, Domenico Catalano, Domenica D'Elia, V. Lorusso, Marcella Attimonelli:
KEYnet: a keywords database for biosequences functional organization. Nucleic Acids Res. 27(1): 365-367 (1999) - 1998
- [j7]Marcella Attimonelli, D. Calo, J. M. Cooper, A. de Montalvo, Flavio Licciulli, D. Sasanelli, K. Stevens, B. S. Malladi, Cecilia Saccone, Anthony H. V. Shapira:
The mitBASE human dataset structure. Nucleic Acids Res. 26(1): 116-119 (1998) - [j6]Marcella Attimonelli, D. Calo, A. de Montalvo, Cecilia Lanave, D. Sasanelli, Mila Tommaseo Ponzetta, Cecilia Saccone:
Update of MmtDB: a Metazoa mitochondrial DNA variants database. Nucleic Acids Res. 26(1): 120-125 (1998) - 1997
- [j5]D. Calo, A. Depascali, D. Sasanelli, F. Tanzariello, Mila Tommaseo Ponzetta, Cecilia Saccone, Marcella Attimonelli:
MmtDB: a Metazoa mitochondrial DNA variants database. Nucleic Acids Res. 25(1): 200-205 (1997) - 1996
- [j4]Giorgio Grillo, Marcella Attimonelli, Sabino Liuni, Graziano Pesole:
CLEANUP: a fast computer program for removing redundancies from nucleotide sequence databases. Comput. Appl. Biosci. 12(1): 1-8 (1996) - 1993
- [j3]N. Prunella, Sabino Liuni, Marcella Attimonelli, Graziano Pesole:
FASTPAT: a fast and efficient algorithm for string searching in DNA sequences. Comput. Appl. Biosci. 9(5): 541-545 (1993) - 1992
- [j2]Elisabetta Pizzi, Marcella Attimonelli, Sabino Liuni, Clara Frontali, Cecilia Saccone:
A simple method for global sequence comparison. Nucleic Acids Res. 20(1): 131-136 (1992) - 1985
- [j1]Manolo Gouy, Christian Gautier, Marcella Attimonelli, Cecilia Lanave, G. di Paola:
ACNUC - a portable retrieval system for nucleic acid sequence databases: logical and physical designs and usage. Comput. Appl. Biosci. 1(3): 167-172 (1985)
Conference and Workshop Papers
- 2006
- [c2]Margherita Berardi, Donato Malerba, Marcella Attimonelli:
Mining Information Extraction Models for HmtDB annotation. ICDM Workshops 2006: 207-212 - 1994
- [c1]Marcella Attimonelli, D. Calo, A. Depascali, M. Porzio, F. Tanzariello, M. Vitale, Cecilia Saccone:
MmtDB: The Metazoa Mitochonrial DNA Variants Specialized Database. CODATA 1994: 239-248
Informal and Other Publications
- 2020
- [i1]Alessia David, Valérie Barbié, Marcella Attimonelli, Roberto Preste, Enni Makkonen, Heidi Marjonen, Mats R. K. Lindstedt, Kati Kristiansson, Sarah E. Hunt, Fiona Cunningham, Ilkka Lappalainen, Michael J. E. Sternberg:
Annotation and curation of human genomic variations: an ELIXIR Implementation Study. F1000Research 9: 1207 (2020)
Coauthor Index
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