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Journal Articles
- 2014
[j5]Delphine Naquin
, Yves d'Aubenton-Carafa, Claude Thermes, Maud Silvain:
CIRCUS: a package for Circos display of structural genome variations from paired-end and mate-pair sequencing data. BMC Bioinform. 15: 198 (2014)- 2012
- [j4]Julien Allali, Cédric Saule, Cédric Chauve, Yves D'Aubenton-Carafa, Alain Denise, Christine Drevet, Pascal Ferraro, Daniel Gautheret, Claire Herrbach, Fabrice Leclerc, Antoine de Monte, Aïda Ouangraoua, Marie-France Sagot, Michel Termier, Claude Thermes, Hélène Touzet:
BRASERO: A Resource for Benchmarking RNA Secondary Structure Comparison Algorithms. Adv. Bioinformatics 2012: 893048:1-893048:5 (2012) - [j3]Antoine Baker, Benjamin Audit, Chun-Long Chen, Benoit Moindrot, Antoine Leleu, Guillaume Guilbaud, Aurélien Rappailles, Cédric Vaillant, Arach Goldar, Fabien Mongelard, Yves D'Aubenton-Carafa, Olivier Hyrien, Claude Thermes, Alain Arneodo:
Replication Fork Polarity Gradients Revealed by Megabase-Sized U-Shaped Replication Timing Domains in Human Cell Lines. PLoS Comput. Biol. 8(4) (2012) - 2011
- [j2]Guillaume Guilbaud, Aurélien Rappailles, Antoine Baker, Chun-Long Chen, Alain Arneodo, Arach Goldar, Yves D'Aubenton-Carafa, Claude Thermes, Benjamin Audit, Olivier Hyrien:
Evidence for Sequential and Increasing Activation of Replication Origins along Replication Timing Gradients in the Human Genome. PLoS Comput. Biol. 7(12) (2011) - 1999
- [j1]Laurence Vignal, Frédérique Lisacek, Joël Quinqueton, Yves D'Aubenton-Carafa, Claude Thermes:
A Multi-agent System Simulating Human Splice Site Recognition. Comput. Chem. 23(3-4): 219-231 (1999)
Conference and Workshop Papers
- 2013
- [c2]Benjamin Audit, Antoine Baker, Rasha E. Boulos, Hanna Julienne, Alain Arneodo, C. L. Chen, Yves d'Aubenton-Carafa, Claude Thermes, Arach Goldar, Guillaume Guilbaud, Aurélien Rappailles, Olivier Hyrien:
Relating mammalian replication program to large-scale chromatin folding. BCB 2013: 799 - 2006
- [c1]Alain Arneodo, Yves D'Aubenton-Carafa, Benjamin Audit, Edward-Benedict Brodie, Samuel Nicolay, Philippe Saint-Jean, Claude Thermes, Marie Touchon, Cédric Vaillant:
Large-scale analysis of the human genome: From DNA sequence analysis to the modeling of replication in higher eukaryotes. EUSIPCO 2006: 1-6
Reference Works
- 2009
- [r1]Alain Arneodo, Benjamin Audit, Edward-Benedict Brodie of Brodie, Samuel Nicolay, Marie Touchon, Yves D'Aubenton-Carafa, Maxime Huvet, Claude Thermes:
Fractals and Wavelets: What Can We Learn on Transcription and Replication from Wavelet-Based Multifractal Analysis of DNA Sequences. Encyclopedia of Complexity and Systems Science 2009: 3893-3924
Coauthor Index
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