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2020 – today
- 2023
[j15]Davy Weissenbacher
, Karen O'Connor, Siddharth Rawal, Yu Zhang, Richard Tzong-Han Tsai, Timothy A. Miller, Dongfang Xu, Carol Anderson, Bo Liu, Qing Han, Jinfeng Zhang, Igor Kulev, Berkay Köprü, Raul Rodriguez-Esteban, Elif Ozkirimli, Ammer Ayach, Roland Roller, Stephen R. Piccolo, Peijin Han, V. G. Vinod Vydiswaran, Ramya Tekumalla, Juan M. Banda, Parsa Bagherzadeh, Sabine Bergler, João Figueira Silva, Tiago Almeida, Paloma Martínez, Renzo M. Rivera Zavala, Chen-Kai Wang, Hong-Jie Dai, Luis Alberto Robles Hernandez, Graciela Gonzalez-Hernandez:
Automatic Extraction of Medication Mentions from Tweets - Overview of the BioCreative VII Shared Task 3 Competition. Database J. Biol. Databases Curation 2023 (2023)- 2022
- [c16]Davy Weissenbacher, Juan M. Banda, Vera Davydova, Darryl Estrada-Zavala, Luis Gascó Sánchez, Yao Ge, Yuting Guo, Ari Z. Klein, Martin Krallinger, Mathias Leddin, Arjun Magge, Raul Rodriguez-Esteban, Abeed Sarker, Lucia Schmidt, Elena Tutubalina, Graciela Gonzalez-Hernandez:
Overview of the Seventh Social Media Mining for Health Applications (#SMM4H) Shared Tasks at COLING 2022. SMM4H@COLING 2022: 221-241 - [e1]Graciela Gonzalez-Hernandez, Davy Weissenbacher:
Proceedings of The Seventh Workshop on Social Media Mining for Health Applications, Workshop & Shared Task, SMM4H@COLING 2022, Gyeongju, Republic of Korea, October 12 - 17, 2022. Association for Computational Linguistics 2022 [contents] - 2021
- [j14]Arjun Magge, Elena Tutubalina, Zulfat Miftahutdinov, Ilseyar Alimova, Anne Dirkson, Suzan Verberne, Davy Weissenbacher, Graciela Gonzalez-Hernandez:
DeepADEMiner: a deep learning pharmacovigilance pipeline for extraction and normalization of adverse drug event mentions on Twitter. J. Am. Medical Informatics Assoc. 28(10): 2184-2192 (2021) - [j13]Davy Weissenbacher, Suyu Ge, Ari Z. Klein, Karen O'Connor, Robert Gross, Sean Hennessy, Graciela Gonzalez-Hernandez:
Active neural networks to detect mentions of changes to medication treatment in social media. J. Am. Medical Informatics Assoc. 28(12): 2551-2561 (2021) - [c15]Davy Weissenbacher, Siddharth Rawal, Arjun Magge, Graciela Gonzalez-Hernandez:
Addressing Extreme Imbalance for Detecting Medications Mentioned in Twitter User Timelines. AIME 2021: 93-102 - 2020
- [j12]Arjun Magge, Davy Weissenbacher, Karen O'Connor, Tasnia Tahsin, Graciela Gonzalez-Hernandez, Matthew Scotch:
GeoBoost2: a natural languageprocessing pipeline for GenBank metadata enrichment for virus phylogeography. Bioinform. 36(20): 5120-5121 (2020)
2010 – 2019
- 2019
- [j11]Davy Weissenbacher, Abeed Sarker, Ari Z. Klein, Karen O'Connor, Arjun Magge, Graciela Gonzalez-Hernandez:
Deep neural networks ensemble for detecting medication mentions in tweets. J. Am. Medical Informatics Assoc. 26(12): 1618-1626 (2019) - [j10]Ari Z. Klein, Abeed Sarker, Davy Weissenbacher, Graciela Gonzalez-Hernandez:
Towards scaling Twitter for digital epidemiology of birth defects. npj Digit. Medicine 2 (2019) - [c14]Arjun Magge, Davy Weissenbacher, Abeed Sarker, Matthew Scotch, Graciela Gonzalez-Hernandez:
Bi-directional Recurrent Neural Network Models for Geographic Location Extraction in Biomedical Literature. PSB 2019: 100-111 - [c13]Graciela Gonzalez, Zhiyong Lu, Robert Leaman, Davy Weissenbacher, Mary Regina Boland, Yong Chen, Jingcheng Du, Juliane Fluck, Casey S. Greene, John H. Holmes, Aditya Kashyap, Rikke Linnemann Nielsen, Zhengqing Ouyang, Sebastian Schaaf, Jaclyn N. Taroni, Cui Tao, Yuping Zhang, Hongfang Liu:
Text Mining and Machine Learning for Precision Medicine. PSB 2019: 449-454 - [c12]Davy Weissenbacher, Arjun Magge, Karen O'Connor, Matthew Scotch, Graciela Gonzalez-Hernandez:
SemEval-2019 Task 12: Toponym Resolution in Scientific Papers. SemEval@NAACL-HLT 2019: 907-916 - [i4]Davy Weissenbacher, Abeed Sarker, Ari Z. Klein, Karen O'Connor, Arjun Magge Ranganatha, Graciela Gonzalez-Hernandez:
Deep Neural Networks Ensemble for Detecting Medication Mentions in Tweets. CoRR abs/1904.05308 (2019) - 2018
- [j9]Tasnia Tahsin, Davy Weissenbacher, Karen O'Connor, Arjun Magge, Matthew Scotch, Graciela Gonzalez-Hernandez:
GeoBoost: accelerating research involving the geospatial metadata of virus GenBank records. Bioinform. 34(9): 1606-1608 (2018) - [j8]Arjun Magge, Davy Weissenbacher, Abeed Sarker, Matthew Scotch, Graciela Gonzalez-Hernandez:
Deep neural networks and distant supervision for geographic location mention extraction. Bioinform. 34(13): i565-i573 (2018) - [j7]Ari Z. Klein, Abeed Sarker, Haitao Cai, Davy Weissenbacher, Graciela Gonzalez-Hernandez:
Social media mining for birth defects research: A rule-based, bootstrapping approach to collecting data for rare health-related events on Twitter. J. Biomed. Informatics 87: 68-78 (2018) - [i3]Ari Z. Klein, Abeed Sarker, Davy Weissenbacher, Graciela Gonzalez-Hernandez:
Automatically Detecting Self-Reported Birth Defect Outcomes on Twitter for Large-scale Epidemiological Research. CoRR abs/1810.09506 (2018) - 2017
- [j6]Tasnia Tahsin, Davy Weissenbacher, Demetrius Jones-Shargani, Daniel Magee, Matteo Vaiente, Graciela Gonzalez, Matthew Scotch:
Named entity linking of geospatial and host metadata in GenBank for advancing biomedical research. Database J. Biol. Databases Curation 2017: bax093 (2017) - 2016
- [j5]Tasnia Tahsin, Davy Weissenbacher, Robert Rivera, Rachel Beard, Mari Firago, Garrick L. Wallstrom, Matthew Scotch, Graciela Gonzalez:
A high-precision rule-based extraction system for expanding geospatial metadata in GenBank records. J. Am. Medical Informatics Assoc. 23(5): 934-941 (2016) - [c11]Davy Weissenbacher, Travis A. Johnson, Laura Wojtulewicz, Amylou Dueck, Dona Locke, Richard J. Caselli, Graciela Gonzalez:
Automatic Prediction of Linguistic Decline in Writings of Subjects with Degenerative Dementia. HLT-NAACL 2016: 1198-1207 - 2015
- [j4]Davy Weissenbacher, Tasnia Tahsin, Rachel Beard, Mari Figaro, Robert Rivera, Matthew Scotch, Graciela Gonzalez:
Knowledge-driven geospatial location resolution for phylogeographic models of virus migration. Bioinform. 31(12): 348-356 (2015) - [c10]Davy Weissenbacher, Christian Raymond:
Tree-Structured Named Entities Extraction from Competing Speech Transcriptions. NLDB 2015: 249-260 - [c9]Abeed Sarker, Azadeh Nikfarjam, Davy Weissenbacher, Graciela Gonzalez-Hernandez:
DIEGOLab: An Approach for Message-level Sentiment Classification in Twitter. SemEval@NAACL-HLT 2015: 510-514 - 2014
- [c8]Tasnia Tahsin, Robert Rivera, Rachel Beard, Rob Lauder, Davy Weissenbacher, Matthew Scotch, Garrick L. Wallstrom, Graciela Gonzalez:
Natural Language Processing Methods for Enhancing Geographic Metadata for Phylogeography of Zoonotic Viruses. BioNLP@ACL 2014: 1-9 - 2013
- [j3]Davy Weissenbacher, Yutaka Sasaki:
Which Factors Contribute to Resolving Coreference Chains with Bayesian Networks?. Int. J. Comput. Linguistics Appl. 4(2): 11-26 (2013) - 2011
- [j2]Davy Weissenbacher, Adeline Nazarenko:
Understand the effects of erroneous annotations produced by NLP pipelines, a case study on the pronominal anaphora resolution. Trait. Autom. des Langues 52(1): 161-185 (2011)
2000 – 2009
- 2009
- [c7]Davy Weissenbacher, Elisa Pieri, Sophia Ananiadou, Brian Rea, Farida Vis, Yuwei Lin, Rob Procter, Peter Halfpenny:
ASSIST : un moteur de recherche spécialisé pour l'analyse des cadres d'expériences. TALN (Demonstrations) 2009: 13-15 - 2008
- [b1]Davy Weissenbacher:
Influence des annotations imparfaites sur les systèmes de Traitement Automatique des Langues, un cadre applicatif: la résolution de l'anaphore pronominale. (Effects of imperfect annotations on Natural Language Processing systems, an applicative case study: the pronominal anaphora resolution). Paris 13 University, Villetaneuse, Saint-Denis, Bobigny, France, 2008 - 2007
- [j1]Davy Weissenbacher:
Les réseaux bayésiens : un formalisme adapté au traitement automatique des langues ? Rev. d'Intelligence Artif. 21(3): 371-390 (2007) - [c6]Davy Weissenbacher, Adeline Nazarenko:
Identifier les pronoms anaphoriques et trouver leurs antécédents : l'intérêt de la classification bayésienne. TALN (Articles longs) 2007: 45-54 - 2006
- [c5]Sophie Aubin, Julien Derivière, Thierry Hamon, Adeline Nazarenko, Thierry Poibeau, Davy Weissenbacher:
Une infrastructure pour l'annotation linguistique de documents issus du web : le projet ALVIS. AAFD 2006: 65-84 - [c4]Davy Weissenbacher:
Bayesian Network, a Model for NLP? EACL 2006 - [c3]Adeline Nazarenko, Érick Alphonse, Julien Derivière, Thierry Hamon, Guillaume Vauvert, Davy Weissenbacher:
The ALVIS Format for Linguistically Annotated Documents. LREC 2006: 1782-1786 - [i2]Érick Alphonse, Sophie Aubin, Philippe Bessières, Gilles Bisson, Thierry Hamon, Sandrine Lagarrigue, Adeline Nazarenko, Alain-Pierre Manine, Claire Nedellec, Mohamed Ould Abdel Vetah, Thierry Poibeau, Davy Weissenbacher:
Event-based Information Extraction for the biomedical domain: the Caderige project. CoRR abs/cs/0609135 (2006) - [i1]Adeline Nazarenko, Érick Alphonse, Julien Derivière, Thierry Hamon, Guillaume Vauvert, Davy Weissenbacher:
The ALVIS Format for Linguistically Annotated Documents. CoRR abs/cs/0609136 (2006) - 2004
- [c2]Érick Alphonse, Sophie Aubin, Philippe Bessières, Gilles Bisson, Thierry Hamon, Sandrine Lagarrigue, Adeline Nazarenko, Alain-Pierre Manine, Claire Nédellec, Mohamed Ould Abdel Vetah, Thierry Poibeau, Davy Weissenbacher:
Event-Based Information Extraction for the Biomedical Domain: the Caderige Project. NLPBA/BioNLP 2004 - [c1]Davy Weissenbacher:
La relation de synonymie en génomique. RECITAL 2004: 97-102
Coauthor Index
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last updated on 2023-10-02 01:21 CEST by the dblp team
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