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Vincenzo Bonnici
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2020 – today
- 2024
- [j16]Antonino Aparo, Vincenzo Bonnici, Simone Avesani, Luciano Cascione, Rosalba Giugno:
DiGAS: Differential gene allele spectrum as a descriptor in genetic studies. Comput. Biol. Medicine 179: 108924 (2024) - 2023
- [b1]Vincenzo Manca, Vincenzo Bonnici:
Infogenomics - The Informational Analysis of Genomes. Springer 2023, ISBN 978-3-031-44500-2, pp. 1-281 - [j15]Vincenzo Bonnici
, Claudia Mengoni
, Manuel Mangoni
, Giuditta Franco
, Rosalba Giugno
:
PanDelos-frags: A methodology for discovering pangenomic content of incomplete microbial assemblies. J. Biomed. Informatics 148: 104552 (2023) - [c13]Simone Avesani
, Vincenzo Bonnici
, Simone Pernice
, Marco Beccuti
, Rosalba Giugno
:
MODIMO: Workshop on Multi-Omics Data Integration for Modelling Biological Systems. CIKM 2023: 5259-5262 - [c12]Vincenzo Bonnici
, Vincenzo Arceri
, Alessio Diana
, Flavio Bertini
, Eleonora Iotti
, Alessia Levante
, Valentina Bernini
, Erasmo Neviani
, Alessandro Dal Palù
:
BIOCHAIN: towards a platform for securely sharing microbiological data. IDEAS 2023: 59-63 - [c11]Giacomo Boldini
, Alessio Diana
, Vincenzo Arceri
, Vincenzo Bonnici
, Roberto Bagnara
:
A Machine Learning Approach for Source Code Similarity via Graph-Focused Features. LOD (1) 2023: 53-67 - [c10]Silvia Astorino, Vincenzo Bonnici, Giuditta Franco:
An Investigation to Test Spectral Segments as Bacterial Biomarkers. UCNC 2023: 1-16 - 2021
- [j14]Antonino Aparo
, Pietro Sala, Vincenzo Bonnici
, Rosalba Giugno:
TEDAR: Temporal dynamic signal detection of adverse reactions. Artif. Intell. Medicine 122: 102212 (2021) - [j13]Vincenzo Bonnici
, Emiliano Maresi, Rosalba Giugno:
Challenges in gene-oriented approaches for pangenome content discovery. Briefings Bioinform. 22(3) (2021) - [j12]Nicola Licheri
, Vincenzo Bonnici
, Marco Beccuti, Rosalba Giugno:
GRAPES-DD: exploiting decision diagrams for index-driven search in biological graph databases. BMC Bioinform. 22(1): 209 (2021) - [j11]Manuel Tognon
, Vincenzo Bonnici
, Erik Garrison
, Rosalba Giugno
, Luca Pinello:
GRAFIMO: Variant and haplotype aware motif scanning on pangenome graphs. PLoS Comput. Biol. 17(9) (2021) - [j10]Vincenzo Bonnici
, Giuditta Franco
, Vincenzo Manca
:
Spectral concepts in genome informational analysis. Theor. Comput. Sci. 894: 23-30 (2021) - [c9]Marco Beccuti, Vincenzo Bonnici, Rosalba Giugno:
MODIMO: Workshop on Multi-Omics Data Integration for Modelling Biological Systems. CIKM 2021: 4870-4871 - [c8]Nicola Licheri, Elvio Amparone, Vincenzo Bonnici, Rosalba Giugno, Marco Beccuti:
An Entropy Heuristic to Optimize Decision Diagrams for Index-driven Search in Biological Graph Databases. CIKM Workshops 2021 - [c7]Vincenzo Bonnici
, Andrea Cracco, Giuditta Franco
:
A k-mer Based Sequence Similarity for Pangenomic Analyses. LOD 2021: 31-44 - [i5]Vincenzo Bonnici, Giuditta Franco, Vincenzo Manca:
Spectral concepts in genome informational analysis. CoRR abs/2106.15351 (2021) - 2020
- [i4]Giovanni Micale, Vincenzo Bonnici, Alfredo Ferro, Dennis E. Shasha, Rosalba Giugno, Alfredo Pulvirenti:
MultiRI: Fast Subgraph Matching in Labeled Multigraphs. CoRR abs/2003.11546 (2020) - [i3]Vincenzo Bonnici
:
A maximum value for the Kullback-Leibler divergence between quantum discrete distributions. CoRR abs/2008.05932 (2020) - [i2]Vincenzo Bonnici, Giuditta Franco, Vincenzo Manca:
A word recurrence based algorithm to extract genomic dictionaries. CoRR abs/2009.10449 (2020)
2010 – 2019
- 2019
- [c6]Vincenzo Bonnici
, Simone Caligola
, Giulia Fiorini, Luca Giudice, Rosalba Giugno:
LErNet: characterization of lncRNAs via context-aware network expansion and enrichment analysis. CIBCB 2019: 1-8 - [c5]Nicola Bombieri, Vincenzo Bonnici
, Rosalba Giugno:
Parallel Searching on Biological Networks. PDP 2019: 307-314 - 2018
- [j9]Vincenzo Bonnici
, Federico Busato, Stefano Aldegheri, Murodzhon Akhmedov, Luciano Cascione
, Alberto Arribas Carmena, Francesco Bertoni
, Nicola Bombieri, Ivo Kwee, Rosalba Giugno:
Correction to: cuRnet: an R package for graph traversing on GPU. BMC Bioinform. 19(1): 456:1 (2018) - [j8]Vincenzo Bonnici
, Federico Busato, Stefano Aldegheri, Murodzhon Akhmedov, Luciano Cascione
, Alberto Arribas Carmena, Francesco Bertoni
, Nicola Bombieri, Ivo Kwee, Rosalba Giugno
:
cuRnet: an R package for graph traversing on GPU. BMC Bioinform. 19-S(10): 221-230 (2018) - [j7]Vincenzo Bonnici
, Giorgio De Caro, Giorgio Constantino, Sabino Liuni, Domenica D'Elia
, Nicola Bombieri, Flavio Licciulli
, Rosalba Giugno
:
Arena-Idb: a platform to build human non-coding RNA interaction networks. BMC Bioinform. 19-S(10): 231-244 (2018) - [j6]Vincenzo Bonnici
, Vincenzo Manca
:
An Informational Test for Random Finite Strings. Entropy 20(12): 934 (2018) - [j5]Francesco Russo
, Sebastiano Di Bella
, Federica Vannini, Gabriele Berti, Flavia Scoyni
, Helen Cook
, Alberto Santos
, Giovanni Nigita
, Vincenzo Bonnici
, Alessandro Laganà, Filippo Geraci
, Alfredo Pulvirenti, Rosalba Giugno
, Federico De Masi
, Kirstine Belling
, Lars Juhl Jensen
, Søren Brunak, Marco Pellegrini
, Alfredo Ferro:
miRandola 2017: a curated knowledge base of non-invasive biomarkers. Nucleic Acids Res. 46(Database-Issue): D354-D359 (2018) - [c4]Vincenzo Bonnici
, Rosalba Giugno, Nicola Bombieri:
An Efficient Implementation of a Subgraph Isomorphism Algorithm for GPUs. BIBM 2018: 2674-2681 - [c3]Vincenzo Bonnici
, Simone Caligola
, Antonino Aparo
, Rosalba Giugno
:
Centrality Speeds the Subgraph Isomorphism Search Up in Target Aware Contexts. CIBB 2018: 19-26 - [c2]Antonino Aparo
, Vincenzo Bonnici
, Giovanni Micale
, Alfredo Ferro, Dennis E. Shasha, Alfredo Pulvirenti, Rosalba Giugno
:
Simple Pattern-only Heuristics Lead to Fast Subgraph Matching Strategies on Very Large Networks. PACBB 2018: 131-138 - 2017
- [j4]Vincenzo Bonnici
, Rosalba Giugno
:
On the Variable Ordering in Subgraph Isomorphism Algorithms. IEEE ACM Trans. Comput. Biol. Bioinform. 14(1): 193-203 (2017) - 2016
- [j3]Vincenzo Bonnici
, Federico Busato, Giovanni Micale
, Nicola Bombieri, Alfredo Pulvirenti, Rosalba Giugno
:
APPAGATO: an APproximate PArallel and stochastic GrAph querying TOol for biological networks. Bioinform. 32(14): 2159-2166 (2016) - 2015
- [j2]Salvatore Alaimo
, Vincenzo Bonnici
, Damiano Cancemi, Alfredo Ferro, Rosalba Giugno
, Alfredo Pulvirenti:
DT-Web: a web-based application for drug-target interaction and drug combination prediction through domain-tuned network-based inference. BMC Syst. Biol. 9(S-3): S4 (2015) - [i1]Fabio Rinnone
, Giovanni Micale, Vincenzo Bonnici, Gary D. Bader
, Dennis E. Shasha, Alfredo Ferro, Alfredo Pulvirenti, Rosalba Giugno
:
NetMatchStar: an enhanced Cytoscape network querying app. F1000Research 4: 479 (2015) - 2013
- [j1]Vincenzo Bonnici
, Rosalba Giugno
, Alfredo Pulvirenti
, Dennis E. Shasha, Alfredo Ferro:
A subgraph isomorphism algorithm and its application to biochemical data. BMC Bioinform. 14(S-7): S13 (2013) - 2010
- [c1]Vincenzo Bonnici
, Alfredo Ferro, Rosalba Giugno
, Alfredo Pulvirenti
, Dennis E. Shasha:
Enhancing Graph Database Indexing by Suffix Tree Structure. PRIB 2010: 195-203
Coauthor Index
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last updated on 2024-08-29 21:52 CEST by the dblp team
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