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Jeffrey G. Klann
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2020 – today
- 2022
- [j21]Hossein Estiri
, Zachary H. Strasser
, Sina Rashidian
, Jeffrey G. Klann
, Kavishwar B. Wagholikar
, Thomas H. McCoy Jr., Shawn N. Murphy:
An objective framework for evaluating unrecognized bias in medical AI models predicting COVID-19 outcomes. J. Am. Medical Informatics Assoc. 29(8): 1334-1341 (2022) - [j20]Xuan Wang
, Harrison G. Zhang
, Xin Xiong
, Chuan Hong, Griffin M. Weber
, Gabriel A. Brat
, Clara-Lea Bonzel
, Yuan Luo, Rui Duan, Nathan P. Palmer
, Meghan R. Hutch, Alba Gutiérrez-Sacristán
, Riccardo Bellazzi
, Luca Chiovato
, Kelly Cho
, Arianna Dagliati
, Hossein Estiri
, Noelia García-Barrio
, Romain Griffier, David A. Hanauer
, Yuk-Lam Ho
, John H. Holmes
, Mark S. Keller, Jeffrey G. Klann, Sehi L'Yi, Sara Lozano-Zahonero
, Sarah Maidlow
, Adeline Makoudjou, Alberto Malovini
, Bertrand Moal, Jason H. Moore, Michele Morris
, Danielle L. Mowery, Shawn N. Murphy, Antoine Neuraz
, Kee Yuan Ngiam, Gilbert S. Omenn
, Lav P. Patel
, Miguel Pedrera-Jiménez
, Andrea Prunotto, Malarkodi J. Samayamuthu, Fernando J. Sanz Vidorreta, Emily Schriver
, Petra Schubert
, Pablo Serrano-Balazote
, Andrew M. South
, Amelia L. M. Tan, Byorn W. L. Tan, Valentina Tibollo
, Patric Tippmann
, Shyam Visweswaran, Zongqi Xia
, William Yuan, Daniela Zöller
, Isaac S. Kohane, Paul Avillach
, Zijian Guo, Tianxi Cai
:
SurvMaximin: Robust federated approach to transporting survival risk prediction models. J. Biomed. Informatics 134: 104176 (2022) - [c38]Jeffrey G. Klann, Michael Mendis, Kevin Bui, Griffin M. Weber, Diane Keogh, Shawn N. Murphy:
Informatics for Integrating Biology and the Bedside (i2b2) in 2022: Single Sign On and Synthetic Data. AMIA 2022 - [c37]Jeffrey G. Klann, Zachary H. Strasser, Chris J. Kennedy, Meghan Hutch, John H. Holmes, Gabriel A. Brat, Shawn N. Murphy:
Distinguishing Admissions Specifically for COVID-19 from Incidental SARS-CoV-2 Admissions. AMIA 2022 - [c36]Anupama Maram, Nick Benik, Griffin M. Weber, Jeffrey G. Klann:
i2b2 Modern UI to Achieve Unified i2b2/SHRINE User Experience. AMIA 2022 - 2021
- [j19]Kumiko O. Schnock, Min-Jeoung Kang, Sarah Collins Rossetti, Jose P. Garcia, Graham Lowenthal, Chris Knaplund, Frank Y. Chang, David J. Albers, Zfania Tom Korach, Li Zhou, Jeffrey G. Klann, Kenrick Cato, David W. Bates, Patricia C. Dykes:
Identifying nursing documentation patterns associated with patient deterioration and recovery from deterioration in critical and acute care settings. Int. J. Medical Informatics 153: 104525 (2021) - [j18]Melissa A. Haendel, Christopher G. Chute, Tellen D. Bennett, David A. Eichmann
, Justin Guinney, Warren A. Kibbe
, Philip R. O. Payne, Emily R. Pfaff
, Peter N. Robinson
, Joel H. Saltz, Heidi Spratt, Christine Suver, John Wilbanks, Adam B. Wilcox, Andrew E. Williams, Chunlei Wu, Clair Blacketer, Robert L. Bradford, James J. Cimino, Marshall Clark, Evan W. Colmenares, Patricia A. Francis, Davera Gabriel, Alexis Graves, Raju Hemadri, Stephanie S. Hong, George Hripcsak, Dazhi Jiao, Jeffrey G. Klann, Kristin Kostka, Adam M. Lee, Harold P. Lehmann, Lora Lingrey, Robert T. Miller, Michele Morris, Shawn N. Murphy, Karthik Natarajan, Matvey B. Palchuk, Usman Sheikh, Harold Solbrig, Shyam Visweswaran, Anita Walden, Kellie M. Walters, Griffin M. Weber, Xiaohan Tanner Zhang, Richard L. Zhu, Benjamin R. C. Amor, Andrew T. Girvin, Amin Manna, Nabeel Qureshi, Michael G. Kurilla, Sam G. Michael, Lili M. Portilla, Joni L. Rutter, Christopher P. Austin, Ken R. Gersing:
The National COVID Cohort Collaborative (N3C): Rationale, design, infrastructure, and deployment. J. Am. Medical Informatics Assoc. 28(3): 427-443 (2021) - [j17]Sarah Collins Rossetti
, Chris Knaplund, David J. Albers
, Patricia C. Dykes, Min-Jeoung Kang, Zfania Tom Korach, Li Zhou, Kumiko Schnock, Jose P. Garcia, Jessica M. Schwartz
, Li-heng Fu, Jeffrey G. Klann
, Graham Lowenthal, Kenrick Cato:
Healthcare Process Modeling to Phenotype Clinician Behaviors for Exploiting the Signal Gain of Clinical Expertise (HPM-ExpertSignals): Development and evaluation of a conceptual framework. J. Am. Medical Informatics Assoc. 28(6): 1242-1251 (2021) - [j16]Jeffrey G. Klann
, Hossein Estiri
, Griffin M. Weber
, Bertrand Moal
, Paul Avillach
, Chuan Hong
, Amelia L. M. Tan
, Brett K. Beaulieu-Jones
, Victor M. Castro, Thomas Maulhardt
, Alon Geva
, Alberto Malovini
, Andrew M. South
, Shyam Visweswaran
, Michele Morris
, Malarkodi J. Samayamuthu, Gilbert S. Omenn
, Kee Yuan Ngiam
, Kenneth D. Mandl
, Martin Boeker
, Karen L. Olson
, Danielle L. Mowery
, Robert W. Follett
, David A. Hanauer
, Riccardo Bellazzi
, Jason H. Moore
, Ne-Hooi Will Loh
, Douglas S. Bell
, Kavishwar B. Wagholikar
, Luca Chiovato
, Valentina Tibollo
, Siegbert Rieg
, Anthony L. L. J. Li, Vianney Jouhet
, Emily Schriver, Zongqi Xia
, Meghan Hutch, Yuan Luo
, Isaac S. Kohane, Gabriel A. Brat
, Shawn N. Murphy:
Validation of an internationally derived patient severity phenotype to support COVID-19 analytics from electronic health record data. J. Am. Medical Informatics Assoc. 28(7): 1411-1420 (2021) - [c35]Jeffrey G. Klann, Michael Mendis, Peter Rice, Rudy Potenzone, Louisa May Klann, Griffin M. Weber, Diane Keogh, Shawn N. Murphy:
Integrating Informatics for Integrating Biology and the Bedside with tranSMART: Flexible Data Warehousing with Complex Analytics. AMIA 2021 - [c34]Jeffrey G. Klann, Griffin M. Weber, Emma Perez, William Yuan, Gabriel A. Brat, Shawn N. Murphy:
Combining Chart Review and Hospital System Dynamics for Electronic Health Record Phenotyping in an International COVID-19 Research Network. AMIA 2021 - 2020
- [j15]Jean Louis Raisaro
, Francesco Marino, Juan Ramón Troncoso-Pastoriza, Raphaelle Beau-Lejdstrom, Riccardo Bellazzi
, Robert Murphy, Elmer V. Bernstam, Henry Wang, Mauro Bucalo, Yong Chen, Assaf Gottlieb, Arif Ozgun Harmanci, Miran Kim
, Yejin Kim, Jeffrey G. Klann, Catherine Klersy
, Bradley A. Malin, Marie Méan, Fabian Prasser
, Luigia Scudeller
, Ali Torkamani, Julien Vaucher
, Mamta Puppala, Stephen T. C. Wong, Milana Frenkel-Morgenstern, Hua Xu, Baba Maiyaki Musa, Abdulrazaq G. Habib, Trevor Cohen, Adam B. Wilcox, Hamisu M. Salihu, Heidi Sofia, Xiaoqian Jiang, Jean-Pierre Hubaux:
SCOR: A secure international informatics infrastructure to investigate COVID-19. J. Am. Medical Informatics Assoc. 27(11): 1721-1726 (2020) - [c33]Hossein Estiri, Sebastien Vasey, Jeffrey G. Klann, Victor M. Castro, Shawn N. Murphy:
Generative Transfer Learning for Measuring Plausibility of EHR Diagnosis Records Over Time. AMIA 2020 - [c32]Jeffrey G. Klann, Michael Mendis, Diane Keogh, Shawn N. Murphy:
Informatics for Integrating Biology and the Bedside (i2b2) in 2020: Supporting Large Ontologies and REDcap Surveys. AMIA 2020
2010 – 2019
- 2019
- [j14]Hossein Estiri
, Jeffrey G. Klann, Sarah R. Weiler, Ernest Alema-Mensah, R. Joseph Applegate, Galina Lozinski, Nandan Patibandla, Kun Wei, William G. Adams, Marc D. Natter, Elizabeth O. Ofili, Brian Ostasiewski
, Alexander Quarshie, Gary E. Rosenthal, Elmer V. Bernstam, Kenneth D. Mandl, Shawn N. Murphy:
A federated EHR network data completeness tracking system. J. Am. Medical Informatics Assoc. 26(7): 637-645 (2019) - [j13]George Hripcsak, Ning Shang, Peggy L. Peissig, Luke V. Rasmussen
, Cong Liu, Barbara Benoit, Robert J. Carroll, David S. Carrell
, Joshua C. Denny, Ozan Dikilitas, Vivian S. Gainer, Kayla Marie Howell, Jeffrey G. Klann
, Iftikhar J. Kullo, Todd Lingren, Frank D. Mentch, Shawn N. Murphy, Karthik Natarajan, Chunhua Weng
:
Facilitating phenotype transfer using a common data model. J. Biomed. Informatics 96 (2019) - [j12]Hossein Estiri
, Jeffrey G. Klann, Shawn N. Murphy:
A clustering approach for detecting implausible observation values in electronic health records data. BMC Medical Informatics Decis. Mak. 19(1): 142:1-142:16 (2019) - [c31]Jeffrey G. Klann, Nich Wattanasin, Michael Mendis, Matthew A. Joss, Hossein Estiri, Kavishwar B. Wagholikar, Shawn N. Murphy:
Ontologies Enabling Computable Tables. AMIA 2019 - [c30]Sarah Collins Rossetti, Christopher Knaplund, David J. Albers, Abdul A. Tariq, Kui Tang, David K. Vawdrey, Natalie Yip, Patricia C. Dykes, Jeffrey G. Klann, Min-Jeoung Kang, Jose P. Garcia, Li-heng Fu, Kumiko O. Schnock, Kenrick Cato:
Leveraging Clinical Expertise as a Feature - not an Outcome - of Predictive Models: Evaluation of an Early Warning System Use Case. AMIA 2019 - 2018
- [j11]Hossein Estiri, Kari A. Stephens, Jeffrey G. Klann, Shawn N. Murphy:
Exploring completeness in clinical data research networks with DQe-c. J. Am. Medical Informatics Assoc. 25(1): 17-24 (2018) - [j10]Jeffrey G. Klann, Lori C. Phillips, Christopher Herrick, Matthew A. Joss, Kavishwar B. Wagholikar, Shawn N. Murphy:
Web services for data warehouses: OMOP and PCORnet on i2b2. J. Am. Medical Informatics Assoc. 25(10): 1331-1338 (2018) - [c29]Brittany Couture, Jeffrey G. Klann, Kenrick Cato, Christopher Knaplund, Min-Jeoung Kang, Patricia C. Dykes, Sarah A. Collins:
Harmonizing Flowsheet Datasets Across EHRs for a Multi-Site Study. AMIA 2018 - [c28]Jeffrey G. Klann, Stanley Boykin, Marc D. Natter, Margaret Vella, Douglas MacFadden, Sarah R. Weiler, Sebastian Schneeweiss, Kenneth D. Mandl, Shawn N. Murphy:
Accessible Research Commons for Health: Four Years Into the PCORnet Journey. AMIA 2018 - 2017
- [j9]Adam Culbertson, Satyender Goel, Margaret B. Madden, Niloufar Safaeinili, Kathryn L. Jackson, Thomas Carton, Russ Waitman, Mei Liu, Ashok Krishnamurthy, Lauren Hall, Nickie Cappella, Shyam Visweswaran, Michael J. Becich, Reuben J. Applegate, Elmer V. Bernstam, Russell Rothman, Michael E. Matheny, Gloria P. Lipori, Jiang Bian, William R. Hogan
, Douglas S. Bell
, Andrew Martin, Shaun J. Grannis
, Jeffrey G. Klann, Rebecca Sutphen, Amy O'hara, Abel N. Kho:
The Building Blocks of Inter-operability. Appl. Clin. Inform. 08(02): 322-336 (2017) - [j8]Kavishwar B. Wagholikar, Joshua C. Mandel, Jeffrey G. Klann, Nich Wattanasin, Michael Mendis, Christopher G. Chute, Kenneth D. Mandl, Shawn N. Murphy:
SMART-on-FHIR implemented over i2b2. J. Am. Medical Informatics Assoc. 24(2): 398-402 (2017) - [c27]Hossein Estiri, Jeffrey G. Klann, Kavishwar B. Wagholikar, Shawn N. Murphy:
Applying unsupervised learning to characterize rare observations in clinical data: the DQe-p tool. AMIA 2017 - [c26]Jeffrey G. Klann, Matthew A. Joss, Kevin Embree, Shawn N. Murphy:
Reuse of PCORnet Data to Support the Precision Medicine Initiative: Data Model Harmonization. AMIA 2017 - [c25]Jeffrey G. Klann, Kavishwar B. Wagholikar, Lori C. Phillips, Matthew A. Joss, Shawn N. Murphy:
Web-Service-Enabled Apps for Research: SMART-on-FHIR for OMOP and PCORNet. AMIA 2017 - [c24]Hossein Estiri, Kari A. Stephens, Jeffrey G. Klann, Shawn N. Murphy:
Exploring Completeness in Clinical Data Research Networks with DQe-c. CRI 2017 - [c23]Jeffrey G. Klann, Daniella Meeker, Marc B. Rosenman, Shawn N. Murphy:
Data Fitness-for-Use: A Method to Maximize Utility of Poor-Quality Data? CRI 2017 - [c22]Jeffrey G. Klann, Vijay A. Raghavan, Sarah Weiler, Kenneth D. Mandl, Shawn N. Murphy:
Needs-Driven Data Completeness Dashboard in a Multi-Site Research Network. CRI 2017 - [c21]Jeffrey G. Klann, Vijay A. Raghavan, Chunhua Weng, Sarah Weiler, Kenneth D. Mandl, Shawn N. Murphy:
Needs-Driven Data Completeness Assessment for Clinical Research. CRI 2017 - [c20]Kavishwar B. Wagholikar, Rahul Jain, Eliel Oliveira, Joshua C. Mandel, Jeffrey G. Klann, Ricardo Colas, Prasad Patil, Kuladip Yadav, Kenneth D. Mandl, Shawn N. Murphy:
Evolving Research Data Sharing Networks to Clinical App Sharing Networks. CRI 2017 - 2016
- [j7]Jeffrey G. Klann, Aaron Abend, Vijay A. Raghavan, Kenneth D. Mandl, Shawn N. Murphy:
Data interchange using i2b2. J. Am. Medical Informatics Assoc. 23(5): 909-915 (2016) - [c19]Jeffrey G. Klann, Vijay A. Raghavan, Michael Mendis, Douglas MacFadden, Sarah R. Weiler, Kenneth D. Mandl, Shawn N. Murphy:
Comparison of Data Models used in Research Data Repositories for Electronic Phenotyping. AMIA 2016 - [c18]Jeffrey G. Klann, Vijay A. Raghavan, Douglas MacFadden, Sarah R. Weiler, Kenneth D. Mandl, Shawn N. Murphy:
Data Topography of a Large Multi-Site Research Network. AMIA 2016 - [c17]Kavishwar B. Wagholikar, Rahul Jain, Eliel Oliveira, Henry Chu, Harshal Shah, Joshua C. Mandel, Jeffrey G. Klann, Sohail Rao, Kenneth D. Mandl, Shawn N. Murphy, Thomas Carton:
Cajun Codefest 4.0 on SMART-on-FHIR apps for Diabetes. AMIA 2016 - [c16]Kavishwar B. Wagholikar, Rahul Jain, Eliel Oliveira, Joshua C. Mandel, Jeffrey G. Klann, Prasad Patil, Kenneth D. Mandl, Shawn N. Murphy, Thomas Carton:
Evaluation of SMART-on-FHIR I2b2 cell using PCORNET data model. AMIA 2016 - [c15]Jeffrey G. Klann, Vijay A. Raghavan, Douglas MacFadden, Sarah Weiler, Kenneth D. Mandl, Shawn N. Murphy:
Comparison of Two Distributed Data Network Approaches: Democratic and Self-Governed vs. Centrally Managed. CRI 2016 - [c14]Jeffrey G. Klann, Vijay A. Raghavan, Douglas MacFadden, Sarah Weiler, Kenneth D. Mandl, Shawn N. Murphy:
Multi-site Data Completeness Analysis: Application to Laboratory Results in a Large Distributed Research Network. CRI 2016 - [c13]Kavishwar B. Wagholikar, Joshua C. Mandel, Jeffrey G. Klann, Nich Wattanasin, Michael Mendis, Christopher G. Chute, Kenneth D. Mandl, Shawn N. Murphy:
Read only SMART on FHIR Façade for I2b2. CRI 2016 - 2015
- [j6]Jeffrey G. Klann, Michael Mendis, Lori C. Phillips, Alyssa P. Goodson, Beatriz H. Rocha, Howard S. Goldberg, Nich Wattanasin, Shawn N. Murphy:
Taking advantage of continuity of care documents to populate a research repository. J. Am. Medical Informatics Assoc. 22(2): 370-379 (2015) - [j5]Jeffrey G. Klann, Lori C. Phillips, Alexander Turchin, Sarah Weiler, Kenneth D. Mandl, Shawn N. Murphy:
A numerical similarity approach for using retired Current Procedural Terminology (CPT) codes for electronic phenotyping in the Scalable Collaborative Infrastructure for a Learning Health System (SCILHS). BMC Medical Informatics Decis. Mak. 15: 104 (2015) - [c12]Jeffrey G. Klann, Marc D. Natter, Douglas MacFadden, Sarah Weiler, Kenneth D. Mandl, Shawn N. Murphy:
The Scalable Collaborative Infrastructure for a Learning Health System. AMIA 2015 - [c11]Jeffrey G. Klann, Marc D. Natter, Douglas MacFadden, Sarah Weiler, Kenneth D. Mandl, Shawn N. Murphy:
The Scalable Collaborative Infrastructure for a Learning Health System: Facilitating Agile Comparative Effectiveness Research. AMIA 2015 - [c10]Jeffrey G. Klann, Pascal B. Pfiffner, Marc D. Natter, Emily Conner, Paul Blazejewski, Shawn N. Murphy, Kenneth D. Mandl:
Supporting Multi-sourced Medication Information in i2b2. AMIA 2015 - [c9]Michael Mendis, Janice Donahoe, Jeffrey G. Klann, Vijay A. Raghavan, Lori C. Phillips, Alexander Turchin, Shawn N. Murphy:
SCILHS Data Mart Creation Plugin. AMIA 2015 - 2014
- [j4]Kenneth D. Mandl, Isaac S. Kohane, Douglas McFadden, Griffin M. Weber
, Marc D. Natter, Joshua C. Mandel, Sebastian Schneeweiss, Sarah Weiler, Jeffrey G. Klann, Jonathan P. Bickel, William G. Adams, Yaorong Ge, Xiaobo Zhou, James Perkins, Keith Marsolo, Elmer V. Bernstam, John Showalter, Alexander Quarshie, Elizabeth O. Ofili, George Hripcsak, Shawn N. Murphy:
Brief communication: Scalable Collaborative Infrastructure for a Learning Healthcare System (SCILHS): Architecture. J. Am. Medical Informatics Assoc. 21(4): 615-620 (2014) - [j3]Jeffrey G. Klann, Michael D. Buck, Jeffrey S. Brown
, Marc Hadley, Richard Elmore, Griffin M. Weber
, Shawn N. Murphy:
Query Health: standards-based, cross-platform population health surveillance. J. Am. Medical Informatics Assoc. 21(4): 650-656 (2014) - [j2]Jeffrey G. Klann, Peter Szolovits
, Stephen M. Downs, Gunther Schadow:
Decision support from local data: Creating adaptive order menus from past clinician behavior. J. Biomed. Informatics 48: 84-93 (2014) - [c8]Jeffrey G. Klann, Lori C. Phillips, Kenneth D. Mandl, Shawn N. Murphy:
Enabling Patient-Centric Comparative Effectiveness Research in i2b2. AMIA 2014 - 2013
- [c7]Jeffrey G. Klann, Michael D. Buck:
Query Health Across Communities: The New York City Department of Health and Mental Hygiene Pilot. AMIA 2013 - [c6]Jeffrey G. Klann, Michael D. Buck, Jeffrey S. Brown, Shawn N. Murphy, Douglas B. Fridsma:
Query Health: One Step Toward a Learning Health System. AMIA 2013 - [c5]Jeffrey G. Klann, Rachel L. Ramoni, Shawn N. Murphy:
Using SMART and i2b2 to Efficiently Identify Adverse Events. AMIA 2013 - 2012
- [c4]Jeffrey G. Klann, Shawn N. Murphy:
Query Health and i2b2: Enabling Standards-based, Multiplatform Population Health Queries. AMIA 2012 - [c3]Jeffrey G. Klann, Adam Wright, Allison B. McCoy, Shawn N. Murphy:
The Medical App Store, Research Data Repositories, and Physician Cognitive Overload: Uniting Three Large, Multisite Grants for Health Care Transformation. AMIA 2012 - 2010
- [c2]Jeffrey G. Klann, Gunther Schadow:
Modeling the information-value decay of medical problems for problem list maintenance. IHI 2010: 371-375
2000 – 2009
- 2009
- [j1]Jeffrey G. Klann, Peter Szolovits
:
An intelligent listening framework for capturing encounter notes from a doctor-patient dialog. BMC Medical Informatics Decis. Mak. 9(S-1): S3 (2009) - [c1]Jeffrey G. Klann, Gunther Schadow, J. Michael McCoy:
A Recommendation Algorithm for Automating Corollary Order Generation. AMIA 2009
Coauthor Index

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