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Brad A. Chapman
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2010 – 2019
- 2018
- [c2]Ei Pa Pa Pe-Than, James D. Herbsleb, Alexander Nolte, Elizabeth Gerber, Brittany Fiore-Gartland, Brad Chapman, Aurelia Moser, Nancy Wilkins-Diehr:
The 2nd Workshop on Hacking and Making at Time-Bounded Events: Current Trends and Next Steps in Research and Event Design. CHI Extended Abstracts 2018 - [i4]Nomi L. Harris, Heather Wiencko, Brad Chapman, Peter J. A. Cock, Karsten Hokamp, Hilmar Lapp, Christopher J. Fields, Bastian Greshake Tzovaras:
The 2018 Bioinformatics Open Source Conference (GCCBOSC 2018). F1000Research 7: 1309 (2018) - 2017
- [j12]Steffen Möller, Stuart W. Prescott, Lars Wirzenius, Petter Reinholdtsen, Brad Chapman, Pjotr Prins, Stian Soiland-Reyes, Fabian Klötzl, Andrea Bagnacani, Matús Kalas, Andreas Tille, Michael R. Crusoe:
Robust Cross-Platform Workflows: How Technical and Scientific Communities Collaborate to Develop, Test and Share Best Practices for Data Analysis. Data Sci. Eng. 2(3): 232-244 (2017) - [c1]Anna Filippova, Brad Chapman, R. Stuart Geiger, James D. Herbsleb, Arun Kalyanasundaram, Erik H. Trainer, Aurelia Moser, Arlin Stoltzfus:
Hacking and Making at Time-Bounded Events: Current Trends and Next Steps in Research and Event Design. CSCW Companion 2017: 363-370 - [i3]Nomi L. Harris, Peter J. A. Cock, Brad Chapman, Christopher J. Fields, Karsten Hokamp, Hilmar Lapp, Monica C. Munoz-Torres, Bastian Greshake Tzovaras, Heather Wiencko:
The 2017 Bioinformatics Open Source Conference (BOSC). F1000Research 6: 1858- (2017) - [i2]Michael J. Steinbaugh, Lorena Pantano, Rory D. Kirchner, Víctor Barrera, Brad A. Chapman, Mary E. Piper, Meeta Mistry, Radhika S. Khetani, Kayleigh Rutherford, Oliver Hofmann, John N. Hutchinson, Shannan J. Ho Sui:
bcbioRNASeq: R package for bcbio RNA-seq analysis. F1000Research 6: 1976- (2017) - 2016
- [j11]Nomi L. Harris, Peter J. A. Cock, Hilmar Lapp, Brad Chapman, Rob Davey, Christopher J. Fields, Karsten Hokamp, Monica C. Munoz-Torres:
The 2015 Bioinformatics Open Source Conference (BOSC 2015). PLoS Comput. Biol. 12(2) (2016) - [i1]Nomi L. Harris, Peter J. A. Cock, Brad Chapman, Christopher J. Fields, Karsten Hokamp, Hilmar Lapp, Monica C. Munoz-Torres, Heather Wiencko:
The 2016 Bioinformatics Open Source Conference (BOSC). F1000Research 5: 2464 (2016) - 2015
- [j10]Nomi L. Harris, Peter J. A. Cock, Brad A. Chapman, Jeremy Goecks, Hans-Rudolf Hotz, Hilmar Lapp:
The Bioinformatics Open Source Conference (BOSC) 2013. Bioinform. 31(2): 299-300 (2015) - 2014
- [j9]Steffen Möller, Enis Afgan, Michael Banck, Raoul Jean Pierre Bonnal, Timothy Booth, John Chilton, Peter J. A. Cock, Markus Gumbel, Nomi L. Harris, Richard C. G. Holland, Matús Kalas, László Kaján, Eri Kibukawa, David R. Powell, Pjotr Prins, Jacqueline Quinn, Olivier Sallou, Francesco Strozzi, Torsten Seemann, Clare Sloggett, Stian Soiland-Reyes, William Spooner, Sascha Steinbiss, Andreas Tille, Anthony J. Travis, Roman Guimera, Toshiaki Katayama, Brad A. Chapman:
Community-driven development for computational biology at Sprints, Hackathons and Codefests. BMC Bioinform. 15(S-14): S7 (2014) - 2013
- [j8]Umadevi Paila, Brad A. Chapman, Rory D. Kirchner, Aaron R. Quinlan:
GEMINI: Integrative Exploration of Genetic Variation and Genome Annotations. PLoS Comput. Biol. 9(7) (2013) - 2012
- [j7]Konstantinos Krampis, Tim Booth, Brad Chapman, Bela Tiwari, Mesude Bicak, Dawn Field, Karen E. Nelson:
Cloud BioLinux: pre-configured and on-demand bioinformatics computing for the genomics community. BMC Bioinform. 13: 42 (2012) - [j6]Eric Talevich, Brandon M. Invergo, Peter J. A. Cock, Brad A. Chapman:
Bio.Phylo: A unified toolkit for processing, analyzing and visualizing phylogenetic trees in Biopython. BMC Bioinform. 13: 209 (2012) - [j5]Enis Afgan, Brad Chapman, James Taylor:
CloudMan as a platform for tool, data, and analysis distribution. BMC Bioinform. 13: 315 (2012) - [j4]Shannan J. Ho Sui, Kimberly Begley, Dorothy Reilly, Brad Chapman, Ray McGovern, Philippe Rocca-Serra, Eamonn Maguire, Gabriel M. Altschuler, Terah A. A. Hansen, Ramakrishna Sompallae, Andrei Krivtsov, Ramesh A. Shivdasani, Scott A. Armstrong, Aedín C. Culhane, Mick Correll, Susanna-Assunta Sansone, Oliver Hofmann, Winston Hide:
The Stem Cell Discovery Engine: an integrated repository and analysis system for cancer stem cell comparisons. Nucleic Acids Res. 40(Database-Issue): 984-991 (2012) - 2010
- [j3]Enis Afgan, Dannon Baker, Nathan Coraor, Brad Chapman, Anton Nekrutenko, James Taylor:
Galaxy CloudMan: delivering cloud compute clusters. BMC Bioinform. 11(S-12): S4 (2010)
2000 – 2009
- 2009
- [j2]Peter J. A. Cock, Tiago Antao, Jeffrey T. Chang, Brad A. Chapman, Cymon J. Cox, Andrew Dalke, Iddo Friedberg, Thomas Hamelryck, Frank Kauff, Bartek Wilczynski, Michiel J. L. de Hoon:
Biopython: freely available Python tools for computational molecular biology and bioinformatics. Bioinform. 25(11): 1422-1423 (2009) - 2004
- [j1]Brad A. Chapman, John E. Bowers, Stefan R. Schulze, Andrew H. Paterson:
A comparative phylogenetic approach for dating whole genome duplication events. Bioinform. 20(2): 180-185 (2004)
Coauthor Index
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