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Ali Gooya
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2020 – today
- 2024
- [j23]Arezoo Zakeri
, Alireza Hokmabadi, Michael G. Nix, Ali Gooya, Isuru Wijesinghe, Zeike A. Taylor:
4D-Precise: Learning-based 3D motion estimation and high temporal resolution 4DCT reconstruction from treatment 2D+t X-ray projections. Comput. Methods Programs Biomed. 250: 108158 (2024) - [j22]Lucy Godson
, Navid Alemi Koohbanani
, Jeremie Nsengimana, Graham P. Cook, Emily L. Clarke, Darren Treanor
, D. Timothy Bishop
, Julia Newton-Bishop
, Ali Gooya
, Derek R. Magee
:
Immune subtyping of melanoma whole slide images using multiple instance learning. Medical Image Anal. 93: 103097 (2024) - [i8]Soodeh Kalaie, Andy Bulpitt, Alejandro F. Frangi, Ali Gooya:
An End-to-End Deep Learning Generative Framework for Refinable Shape Matching and Generation. CoRR abs/2403.06317 (2024) - [i7]Isuru Wijesinghe, Michael G. Nix, Arezoo Zakeri, Alireza Hokmabadi, Bashar Al-Qaisieh, Ali Gooya, Zeike A. Taylor:
Deep-Motion-Net: GNN-based volumetric organ shape reconstruction from single-view 2D projections. CoRR abs/2407.06692 (2024) - 2023
- [j21]Arezoo Zakeri
, Alireza Hokmabadi
, Ning Bi
, Isuru Wijesinghe
, Michael G. Nix
, Steffen E. Petersen
, Alejandro F. Frangi
, Zeike A. Taylor
, Ali Gooya
:
DragNet: Learning-based deformable registration for realistic cardiac MR sequence generation from a single frame. Medical Image Anal. 83: 102678 (2023) - [j20]Behnaz Elhaminia
, Alexandra Gilbert, John Lilley
, Moloud Abdar
, Alejandro F. Frangi
, Andrew F. Scarsbrook
, Ane Appelt
, Ali Gooya
:
Toxicity Prediction in Pelvic Radiotherapy Using Multiple Instance Learning and Cascaded Attention Layers. IEEE J. Biomed. Health Informatics 27(4): 1958-1966 (2023) - [c27]Behnaz Elhaminia
, Alexandra Gilbert, Alejandro F. Frangi
, Andrew F. Scarsbrook
, John Lilley
, Ane Appelt
, Ali Gooya:
Deep learning with visual explanation for radiotherapy-induced toxicity prediction. Medical Imaging: Computer-Aided Diagnosis 2023 - [c26]Soodeh Kalaie, Andrew J. Bulpitt, Alejandro F. Frangi, Ali Gooya:
A Geometric Deep Learning Framework for Generation of Virtual Left Ventricles as Graphs. MIDL 2023: 426-443 - 2022
- [j19]Arezoo Zakeri
, Alireza Hokmabadi
, Nishant Ravikumar
, Alejandro F. Frangi
, Ali Gooya
:
A probabilistic deep motion model for unsupervised cardiac shape anomaly assessment. Medical Image Anal. 75: 102276 (2022) - [c25]Lucy Godson, Navid Alemi Koohbanani, Jeremie Nsengimana, Graham P. Cook, Emily L. Clarke, Darren Treanor, D. Timothy Bishop, Julia Newton-Bishop, Ali Gooya:
Weakly-supervised learning for image-based classification of primary melanomas into genomic immune subgroups. MIDL 2022: 423-440 - [i6]Lucy Godson, Navid Alemi Koohbanani, Jeremie Nsengimana, Graham P. Cook, Emily L. Clarke, Darren Treanor, D. Timothy Bishop, Julia Newton-Bishop, Ali Gooya:
Weakly-supervised learning for image-based classification of primary melanomas into genomic immune subgroups. CoRR abs/2202.11524 (2022) - 2020
- [j18]Neeraj Kumar
, Ruchika Verma
, Deepak Anand
, Yanning Zhou, Omer Fahri Onder, Efstratios Tsougenis, Hao Chen
, Pheng-Ann Heng
, Jiahui Li, Zhiqiang Hu
, Yunzhi Wang, Navid Alemi Koohbanani, Mostafa Jahanifar, Neda Zamani Tajeddin, Ali Gooya
, Nasir M. Rajpoot
, Xuhua Ren, Sihang Zhou
, Qian Wang, Dinggang Shen, Cheng-Kun Yang, Chi-Hung Weng, Wei-Hsiang Yu, Chao-Yuan Yeh
, Shuang Yang, Shuoyu Xu, Pak-Hei Yeung
, Peng Sun, Amirreza Mahbod
, Gerald Schaefer, Isabella Ellinger
, Rupert Ecker, Örjan Smedby, Chunliang Wang, Benjamin Chidester, That-Vinh Ton, Minh-Triet Tran
, Jian Ma
, Minh N. Do
, Simon Graham, Quoc Dang Vu, Jin Tae Kwak
, Akshaykumar Gunda, Raviteja Chunduri, Corey Hu, Xiaoyang Zhou, Dariush Lotfi, Reza Safdari, Antanas Kascenas, Alison O'Neil, Dennis Eschweiler, Johannes Stegmaier
, Yanping Cui, Baocai Yin, Kailin Chen, Xinmei Tian, Philipp Grüning, Erhardt Barth, Elad Arbel, Itay Remer
, Amir Ben-Dor, Ekaterina Sirazitdinova, Matthias Kohl, Stefan Braunewell, Yuexiang Li, Xinpeng Xie, Linlin Shen, Jun Ma
, Krishanu Das Baksi, Mohammad Azam Khan, Jaegul Choo
, Adrián Colomer
, Valery Naranjo, Linmin Pei
, Khan M. Iftekharuddin, Kaushiki Roy, Debotosh Bhattacharjee
, Aníbal Pedraza
, Maria Gloria Bueno
, Sabarinathan Devanathan, Saravanan Radhakrishnan, Praveen Koduganty, Zihan Wu
, Guanyu Cai, Xiaojie Liu, Yuqin Wang, Amit Sethi:
A Multi-Organ Nucleus Segmentation Challenge. IEEE Trans. Medical Imaging 39(5): 1380-1391 (2020)
2010 – 2019
- 2019
- [j17]Nishant Ravikumar
, Ali Gooya
, Leandro Beltrachini, Alejandro F. Frangi
, Zeike A. Taylor:
Generalised coherent point drift for group-wise multi-dimensional analysis of diffusion brain MRI data. Medical Image Anal. 53: 47-63 (2019) - [j16]Rahman Attar
, Marco Pereañez, Ali Gooya
, Xènia Albà, Le Zhang, Milton Hoz de Vila
, Aaron M. Lee, Nay Aung
, Elena Lukaschuk, Mihir M. Sanghvi
, Kenneth Fung, José Miguel Paiva, Stefan K. Piechnik
, Stefan Neubauer
, Steffen E. Petersen
, Alejandro F. Frangi
:
Quantitative CMR population imaging on 20, 000 subjects of the UK Biobank imaging study: LV/RV quantification pipeline and its evaluation. Medical Image Anal. 56: 26-42 (2019) - [j15]Le Zhang
, Ali Gooya
, Marco Pereañez, Bo Dong, Stefan K. Piechnik
, Stefan Neubauer
, Steffen E. Petersen
, Alejandro F. Frangi
:
Automatic Assessment of Full Left Ventricular Coverage in Cardiac Cine Magnetic Resonance Imaging With Fisher-Discriminative 3-D CNN. IEEE Trans. Biomed. Eng. 66(7): 1975-1986 (2019) - [j14]Hamid Fehri
, Ali Gooya
, Yuanjun Lu, Erik Meijering
, Simon A. Johnston
, Alejandro F. Frangi
:
Bayesian Polytrees With Learned Deep Features for Multi-Class Cell Segmentation. IEEE Trans. Image Process. 28(7): 3246-3260 (2019) - [j13]Mostafa Jahanifar
, Neda Zamani Tajeddin
, Babak Mohammadzadeh Asl
, Ali Gooya
:
Supervised Saliency Map Driven Segmentation of Lesions in Dermoscopic Images. IEEE J. Biomed. Health Informatics 23(2): 509-518 (2019) - [c24]Navid Alemi Koohbanani, Mostafa Jahanifar, Ali Gooya
, Nasir M. Rajpoot
:
Nuclear Instance Segmentation Using a Proposal-Free Spatially Aware Deep Learning Framework. MICCAI (1) 2019: 622-630 - [e4]Ninon Burgos
, Ali Gooya, David Svoboda:
Simulation and Synthesis in Medical Imaging - 4th International Workshop, SASHIMI 2019, Held in Conjunction with MICCAI 2019, Shenzhen, China, October 13, 2019, Proceedings. Lecture Notes in Computer Science 11827, Springer 2019, ISBN 978-3-030-32777-4 [contents] - [i5]Rahman Attar, Marco Pereañez, Ali Gooya, Xènia Albà, Le Zhang, Stefan K. Piechnik, Stefan Neubauer, Steffen E. Petersen, Alejandro F. Frangi:
High Throughput Computation of Reference Ranges of Biventricular Cardiac Function on the UK Biobank Population Cohort. CoRR abs/1901.03326 (2019) - 2018
- [j12]Nishant Ravikumar
, Ali Gooya
, Serkan Çimen, Alejandro F. Frangi
, Zeike A. Taylor:
Group-wise similarity registration of point sets using Student's t-mixture model for statistical shape models. Medical Image Anal. 44: 156-176 (2018) - [j11]Ali Gooya
, Karim Lekadir, Isaac Castro-Mateos, José María Pozo
, Alejandro F. Frangi
:
Mixture of Probabilistic Principal Component Analyzers for Shapes from Point Sets. IEEE Trans. Pattern Anal. Mach. Intell. 40(4): 891-904 (2018) - [j10]Avan Suinesiaputra
, Pierre Ablin, Xènia Albà, Martino Alessandrini
, Jack Allen
, Wenjia Bai
, Serkan Çimen, Peter Claes
, Brett R. Cowan, Jan D'hooge
, Nicolas Duchateau
, Jan Ehrhardt, Alejandro F. Frangi
, Ali Gooya
, Vicente Grau
, Karim Lekadir
, Allen Lu, Anirban Mukhopadhyay, Ilkay Öksüz
, Nripesh Parajuli
, Xavier Pennec
, Marco Pereañez, Catarina Pinto, Paolo Piras, Marc-Michel Rohé, Daniel Rueckert, Dennis Säring, Maxime Sermesant
, Kaleem Siddiqi
, Mahdi Tabassian, Luciano Teresi, Sotirios A. Tsaftaris, Matthias Wilms, Alistair A. Young, Xingyu Zhang, Pau Medrano-Gracia
:
Statistical Shape Modeling of the Left Ventricle: Myocardial Infarct Classification Challenge. IEEE J. Biomed. Health Informatics 22(2): 503-515 (2018) - [c23]Rahman Attar, Marco Pereañez, Ali Gooya
, Xènia Albà, Le Zhang, Stefan K. Piechnik, Stefan Neubauer, Steffen E. Petersen
, Alejandro F. Frangi
:
High Throughput Computation of Reference Ranges of Biventricular Cardiac Function on the UK Biobank Population Cohort. STACOM@MICCAI 2018: 114-121 - [c22]Navid Alemi Koohbanani, Mostafa Jahanifar, Ali Gooya
, Nasir M. Rajpoot
:
Nuclei Detection Using Mixture Density Networks. MLMI@MICCAI 2018: 241-248 - [e3]Ali Gooya
, Orcun Goksel
, Ipek Oguz, Ninon Burgos
:
Simulation and Synthesis in Medical Imaging - Third International Workshop, SASHIMI 2018, Held in Conjunction with MICCAI 2018, Granada, Spain, September 16, 2018, Proceedings. Lecture Notes in Computer Science 11037, Springer 2018, ISBN 978-3-030-00535-1 [contents] - [i4]Navid Alemi Koohbanani, Mostafa Jahanifar, Ali Gooya, Nasir M. Rajpoot:
Nuclei Detection Using Mixture Density Networks. CoRR abs/1808.08279 (2018) - [i3]Navid Alemi Koohbanani, Mostafa Jahanifar, Neda Zamani Tajeddin, Ali Gooya, Nasir M. Rajpoot
:
Leveraging Transfer Learning for Segmenting Lesions and their Attributes in Dermoscopy Images. CoRR abs/1809.10243 (2018) - [i2]Le Zhang, Ali Gooya, Marco Pereañez, Bo Dong, Stefan K. Piechnik, Stefan Neubauer, Steffen E. Petersen, Alejandro F. Frangi:
Automatic Assessment of Full Left Ventricular Coverage in Cardiac Cine Magnetic Resonance Imaging with Fisher-Discriminative 3D CNN. CoRR abs/1811.02688 (2018) - 2017
- [j9]Soodeh Kalaie
, Ali Gooya
:
Vascular tree tracking and bifurcation points detection in retinal images using a hierarchical probabilistic model. Comput. Methods Programs Biomed. 151: 139-149 (2017) - [c21]Hamid Fehri, Ali Gooya
, Simon A. Johnston, Alejandro F. Frangi
:
Multi-class Image Segmentation in Fluorescence Microscopy Using Polytrees. IPMI 2017: 517-528 - [c20]Le Zhang, Ali Gooya
, Alejandro F. Frangi
:
Semi-supervised Assessment of Incomplete LV Coverage in Cardiac MRI Using Generative Adversarial Nets. SASHIMI@MICCAI 2017: 61-68 - [c19]Nishant Ravikumar
, Ali Gooya
, Alejandro F. Frangi
, Zeike A. Taylor
:
Generalised Coherent Point Drift for Group-Wise Registration of Multi-dimensional Point Sets. MICCAI (1) 2017: 309-316 - [e2]Sotirios A. Tsaftaris, Ali Gooya, Alejandro F. Frangi
, Jerry L. Prince:
Simulation and Synthesis in Medical Imaging - Second International Workshop, SASHIMI 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10, 2017, Proceedings. Lecture Notes in Computer Science 10557, Springer 2017, ISBN 978-3-319-68126-9 [contents] - [i1]Mostafa Jahanifar, Neda Zamani Tajeddin, Ali Gooya, Babak Mohammadzadeh Asl:
Segmentation of Lesions in Dermoscopy Images Using Saliency Map And Contour Propagation. CoRR abs/1703.00087 (2017) - 2016
- [j8]Serkan Çimen, Ali Gooya
, Michael Grass, Alejandro F. Frangi
:
Reconstruction of coronary arteries from X-ray angiography: A review. Medical Image Anal. 32: 46-68 (2016) - [j7]Alejandro F. Frangi
, Zeike A. Taylor
, Ali Gooya
:
Precision Imaging: more descriptive, predictive and integrative imaging. Medical Image Anal. 33: 27-32 (2016) - [c18]Le Zhang, Ali Gooya
, Bo Dong, Rui Hua, Steffen E. Petersen
, Pau Medrano-Gracia
, Alejandro F. Frangi
:
Automated Quality Assessment of Cardiac MR Images Using Convolutional Neural Networks. SASHIMI@MICCAI 2016: 138-145 - [c17]Nishant Ravikumar
, Ali Gooya
, Serkan Çimen, Alejandro F. Frangi
, Zeike A. Taylor
:
A Multi-resolution T-Mixture Model Approach to Robust Group-Wise Alignment of Shapes. MICCAI (3) 2016: 142-149 - [c16]Ali Sarrami-Foroushani
, Toni Lassila
, Jose M. Pozo, Ali Gooya
, Alejandro F. Frangi
:
Direct Estimation of Wall Shear Stress from Aneurysmal Morphology: A Statistical Approach. MICCAI (3) 2016: 201-209 - [c15]Serkan Çimen, Ali Gooya
, Nishant Ravikumar
, Zeike A. Taylor
, Alejandro F. Frangi
:
Reconstruction of Coronary Artery Centrelines from X-Ray Angiography Using a Mixture of Student's t-Distributions. MICCAI (3) 2016: 291-299 - [c14]Nishant Ravikumar
, Ali Gooya
, Alejandro F. Frangi
, Zeike A. Taylor
:
Robust group-wise rigid registration of point sets using t-mixture model. Medical Imaging: Image Processing 2016: 97840S - [c13]Serkan Çimen, Ali Gooya
, Alejandro F. Frangi
:
Reconstruction of coronary artery centrelines from X-ray rotational angiography using a probabilistic mixture model. Medical Imaging: Image Processing 2016: 97843A - [e1]Sotirios A. Tsaftaris, Ali Gooya, Alejandro F. Frangi, Jerry L. Prince:
Simulation and Synthesis in Medical Imaging - First International Workshop, SASHIMI 2016, Held in Conjunction with MICCAI 2016, Athens, Greece, October 21, 2016, Proceedings. Lecture Notes in Computer Science 9968, 2016, ISBN 978-3-319-46629-3 [contents] - 2015
- [j6]Sina Shamekhi, Mohammad Hossein Miran Baygi, Bahareh Azarian, Ali Gooya
:
A novel multi-scale Hessian based spot enhancement filter for two dimensional gel electrophoresis images. Comput. Biol. Medicine 66: 154-169 (2015) - [j5]Ali Gooya
, Christos Davatzikos
, Alejandro F. Frangi
:
A Bayesian Approach to Sparse Model Selection in Statistical Shape Models. SIAM J. Imaging Sci. 8(2): 858-887 (2015) - [c12]Ali Gooya
, Karim Lekadir, Xènia Albà, Andrew J. Swift, Jim M. Wild
, Alejandro F. Frangi
:
Joint Clustering and Component Analysis of Correspondenceless Point Sets: Application to Cardiac Statistical Modeling. IPMI 2015: 98-109 - [c11]Catarina Pinto, Serkan Çimen, Ali Gooya
, Karim Lekadir, Alejandro F. Frangi
:
Joint Clustering and Component Analysis of Spatio-Temporal Shape Patterns in Myocardial Infarction. STACOM@MICCAI 2015: 171-179 - 2013
- [c10]Ali Gooya
, Elaheh Mousavi, Christos Davatzikos
, Hongen Liao
:
A Bayesian Approach for Construction of Sparse Statistical Shape Models Using Dirichlet Distribution. AE-CAI 2013: 144-152 - 2012
- [j4]Ali Gooya
, Hongen Liao
, Ichiro Sakuma:
Generalization of geometrical flux maximizing flow on Riemannian manifolds for improved volumetric blood vessel segmentation. Comput. Medical Imaging Graph. 36(6): 474-483 (2012) - [j3]Ali Gooya
, Kilian M. Pohl
, Michel Bilello, Luigi Cirillo
, George Biros, Elias R. Melhem, Christos Davatzikos
:
GLISTR: Glioma Image Segmentation and Registration. IEEE Trans. Medical Imaging 31(10): 1941-1954 (2012) - 2011
- [j2]Ali Gooya
, George Biros, Christos Davatzikos
:
Deformable Registration of Glioma Images Using EM Algorithm and Diffusion Reaction Modeling. IEEE Trans. Medical Imaging 30(2): 375-390 (2011) - [c9]Christos Davatzikos
, Evangelia I. Zacharaki
, Ali Gooya
, Vanessa Clark:
Multi-parametric analysis and registration of brain tumors: Constructing statistical atlases and diagnostic tools of predictive value. EMBC 2011: 6979-6981 - [c8]Ali Gooya
, Kilian M. Pohl, Michel Bilello, George Biros, Christos Davatzikos
:
Joint Segmentation and Deformable Registration of Brain Scans Guided by a Tumor Growth Model. MICCAI (2) 2011: 532-540 - 2010
- [c7]Ali Gooya
, George Biros, Christos Davatzikos
:
An EM algorithm for brain tumor image registration: A tumor growth modeling based approach. CVPR Workshops 2010: 39-46 - [c6]Nematollah Batmanghelich, Ali Gooya
, Stathis Kanterakis, Ben Taskar, Christos Davatzikos
:
Application of trace-norm and low-rank matrix decomposition for computational anatomy. CVPR Workshops 2010: 146-153
2000 – 2009
- 2008
- [j1]Ali Gooya
, Hongen Liao
, Kiyoshi Matsumiya, Ken Masamune, Yoshitaka Masutani
, Takeyoshi Dohi:
A Variational Method for Geometric Regularization of Vascular Segmentation in Medical Images. IEEE Trans. Image Process. 17(8): 1295-1312 (2008) - [c5]Ali Gooya
, Takeyoshi Dohi, Ichiro Sakuma, Hongen Liao
:
Anisotropic Haralick Edge Detection Scheme with Application to Vessel Segmentation. MIAR 2008: 430-438 - [c4]Ali Gooya
, Takeyoshi Dohi, Ichiro Sakuma, Hongen Liao
:
R-PLUS: A Riemannian Anisotropic Edge Detection Scheme for Vascular Segmentation. MICCAI (1) 2008: 262-269 - 2007
- [c3]Ali Gooya
, Hongen Liao
, Kiyoshi Matsumiya, Ken Masamune, Takeyoshi Dohi:
Effective Statistical Edge Integration Using a Flux Maximizing Scheme for Volumetric Vascular Segmentation in MRA. IPMI 2007: 86-97 - [c2]Ali Gooya
, Hongen Liao
, Kiyoshi Matsumiya, Ken Masamune, Takeyoshi Dohi:
A Shape Induced Anisotropic Flowfor Volumetric Vascular Segmentation in MRA. ISBI 2007: 664-667 - 2006
- [c1]Ali Gooya
, Hongen Liao
, Kiyoshi Matsumiya, Ken Masamune, Takeyoshi Dohi:
Pulsative Flow Segmentation in MRA Image Series by AR Modeling and EM Algorithm. MIAR 2006: 356-363
Coauthor Index
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last updated on 2024-08-18 00:30 CEST by the dblp team
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