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Stuart A. Cook
Person information
- affiliation: Imperial College London, Hammersmith Hospital, UK
- affiliation: uke National University of Singapore
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2020 – today
- 2021
[c9]Shuo Wang
, Chen Qin
, Nicoló Savioli, Chen Chen
, Declan P. O'Regan, Stuart A. Cook, Yike Guo
, Daniel Rueckert, Wenjia Bai:
Joint Motion Correction and Super Resolution for Cardiac Segmentation via Latent Optimisation. MICCAI (3) 2021: 14-24
[i8]Shuo Wang, Chen Qin, Nicoló Savioli, Chen Chen, Declan P. O'Regan, Stuart A. Cook, Yike Guo, Daniel Rueckert, Wenjia Bai:
Joint Motion Correction and Super Resolution for Cardiac Segmentation via Latent Optimisation. CoRR abs/2107.03887 (2021)
[i7]Nicoló Savioli, Antonio de Marvao, Wenjia Bai, Shuo Wang, Stuart A. Cook, Calvin W. L. Chin, Daniel Rueckert, Declan P. O'Regan:
Joint Semi-supervised 3D Super-Resolution and Segmentation with Mixed Adversarial Gaussian Domain Adaptation. CoRR abs/2107.07975 (2021)- 2020
[j9]Carlo Biffi
, Juan J. Cerrolaza, Giacomo Tarroni, Wenjia Bai
, Antonio de Marvao
, Ozan Oktay
, Christian Ledig, Loïc Le Folgoc
, Konstantinos Kamnitsas
, Georgia Doumou, Jinming Duan
, Sanjay K. Prasad, Stuart A. Cook, Declan P. O'Regan
, Daniel Rueckert
:
Explainable Anatomical Shape Analysis Through Deep Hierarchical Generative Models. IEEE Trans. Medical Imaging 39(6): 2088-2099 (2020)
2010 – 2019
- 2019
[j8]Ghalib A. Bello, Timothy J. W. Dawes
, Jinming Duan
, Carlo Biffi, Antonio de Marvao
, Luke S. G. E. Howard, J. Simon R. Gibbs, Martin R. Wilkins
, Stuart A. Cook, Daniel Rueckert, Declan P. O'Regan
:
Deep-learning cardiac motion analysis for human survival prediction. Nat. Mach. Intell. 1(2): 95-104 (2019)
[j7]Giacomo Tarroni
, Ozan Oktay
, Wenjia Bai
, Andreas Schuh, Hideaki Suzuki, Jonathan Passerat-Palmbach
, Antonio de Marvao
, Declan P. O'Regan
, Stuart A. Cook
, Ben Glocker
, Paul M. Matthews
, Daniel Rueckert
:
Learning-Based Quality Control for Cardiac MR Images. IEEE Trans. Medical Imaging 38(5): 1127-1138 (2019)
[c8]Carlo Biffi, Juan J. Cerrolaza, Giacomo Tarroni
, Antonio de Marvao
, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
3D High-Resolution Cardiac Segmentation Reconstruction From 2D Views Using Conditional Variational Autoencoders. ISBI 2019: 1643-1646
[i6]Carlo Biffi, Juan J. Cerrolaza, Giacomo Tarroni, Antonio de Marvao, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
3D High-Resolution Cardiac Segmentation Reconstruction from 2D Views using Conditional Variational Autoencoders. CoRR abs/1902.11000 (2019)
[i5]Carlo Biffi, Juan J. Cerrolaza, Giacomo Tarroni, Wenjia Bai, Ozan Oktay, Loïc Le Folgoc, Konstantinos Kamnitsas, Antonio de Marvao, Georgia Doumou, Jinming Duan, Sanjay K. Prasad, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
Explainable Shape Analysis through Deep Hierarchical Generative Models: Application to Cardiac Remodeling. CoRR abs/1907.00058 (2019)- 2018
[j6]Carlo Biffi
, Antonio de Marvao
, Mark I Attard, Timothy J. W. Dawes
, Nicola Whiffin, Wenjia Bai, Wenzhe Shi, Catherine Francis
, Hannah Meyer
, Rachel J. Buchan
, Stuart A. Cook, Daniel Rueckert, Declan P. O'Regan
:
Three-dimensional cardiovascular imaging-genetics: a mass univariate framework. Bioinform. 34(1): 97-103 (2018)
[j5]Ozan Oktay
, Enzo Ferrante
, Konstantinos Kamnitsas
, Mattias P. Heinrich
, Wenjia Bai
, Jose Caballero
, Stuart A. Cook, Antonio de Marvao
, Timothy Dawes
, Declan P. O'Regan
, Bernhard Kainz
, Ben Glocker, Daniel Rueckert
:
Anatomically Constrained Neural Networks (ACNNs): Application to Cardiac Image Enhancement and Segmentation. IEEE Trans. Medical Imaging 37(2): 384-395 (2018)
[c7]Giacomo Tarroni
, Ozan Oktay, Matthew Sinclair, Wenjia Bai, Andreas Schuh, Hideaki Suzuki, Antonio de Marvao
, Declan P. O'Regan, Stuart A. Cook, Daniel Rueckert:
A Comprehensive Approach for Learning-Based Fully-Automated Inter-slice Motion Correction for Short-Axis Cine Cardiac MR Image Stacks. MICCAI (1) 2018: 268-276
[c6]Carlo Biffi
, Ozan Oktay, Giacomo Tarroni
, Wenjia Bai, Antonio M. Simoes Monteiro de Marvao
, Georgia Doumou, Martin Rajchl, Reem Bedair, Sanjay K. Prasad, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
Learning Interpretable Anatomical Features Through Deep Generative Models: Application to Cardiac Remodeling. MICCAI (2) 2018: 464-471
[i4]Carlo Biffi, Ozan Oktay, Giacomo Tarroni, Wenjia Bai, Antonio M. Simoes Monteiro de Marvao, Georgia Doumou, Martin Rajchl, Reem Bedair, Sanjay K. Prasad, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
Learning Interpretable Anatomical Features Through Deep Generative Models: Application to Cardiac Remodeling. CoRR abs/1807.06843 (2018)
[i3]Giacomo Tarroni, Ozan Oktay, Matthew Sinclair, Wenjia Bai, Andreas Schuh, Hideaki Suzuki, Antonio de Marvao, Declan P. O'Regan, Stuart A. Cook, Daniel Rueckert:
A Comprehensive Approach for Learning-based Fully-Automated Inter-slice Motion Correction for Short-Axis Cine Cardiac MR Image Stacks. CoRR abs/1810.02201 (2018)
[i2]Ghalib A. Bello, Timothy J. W. Dawes, Jinming Duan, Carlo Biffi, Antonio de Marvao, Luke S. G. E. Howard, J. Simon R. Gibbs, Martin R. Wilkins, Stuart A. Cook, Daniel Rueckert, Declan P. O'Regan:
Deep learning cardiac motion analysis for human survival prediction. CoRR abs/1810.03382 (2018)- 2017
[j4]Ozan Oktay
, Wenjia Bai, Ricardo Guerrero, Martin Rajchl, Antonio de Marvao
, Declan P. O'Regan
, Stuart A. Cook, Mattias P. Heinrich
, Ben Glocker, Daniel Rueckert:
Stratified Decision Forests for Accurate Anatomical Landmark Localization in Cardiac Images. IEEE Trans. Medical Imaging 36(1): 332-342 (2017)
[c5]Giacomo Tarroni
, Ozan Oktay, Wenjia Bai, Andreas Schuh
, Hideaki Suzuki, Jonathan Passerat-Palmbach
, Ben Glocker, Antonio de Marvao
, Declan P. O'Regan, Stuart A. Cook, Daniel Rueckert:
Learning-Based Heart Coverage Estimation for Short-Axis Cine Cardiac MR Images. FIMH 2017: 73-82
[i1]Ozan Oktay, Enzo Ferrante, Konstantinos Kamnitsas, Mattias P. Heinrich, Wenjia Bai, Jose Caballero, Ricardo Guerrero, Stuart A. Cook, Antonio de Marvao, Timothy Dawes, Declan P. O'Regan, Bernhard Kainz, Ben Glocker, Daniel Rueckert:
Anatomically Constrained Neural Networks (ACNN): Application to Cardiac Image Enhancement and Segmentation. CoRR abs/1705.08302 (2017)- 2016
[c4]Ozan Oktay, Giacomo Tarroni, Wenjia Bai, Antonio de Marvao, Declan P. O'Regan, Stuart A. Cook, Daniel Rueckert:
Respiratory Motion Correction for 2D Cine Cardiac MR Images using Probabilistic Edge Maps. CinC 2016
[c3]Ozan Oktay, Wenjia Bai, Matthew C. H. Lee, Ricardo Guerrero, Konstantinos Kamnitsas
, Jose Caballero, Antonio de Marvao
, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
Multi-input Cardiac Image Super-Resolution Using Convolutional Neural Networks. MICCAI (3) 2016: 246-254- 2015
[j3]Wenjia Bai
, Wenzhe Shi, Antonio M. Simoes Monteiro de Marvao
, Timothy J. W. Dawes
, Declan P. O'Regan
, Stuart A. Cook, Daniel Rueckert:
A bi-ventricular cardiac atlas built from 1000+ high resolution MR images of healthy subjects and an analysis of shape and motion. Medical Image Anal. 26(1): 133-145 (2015)
[c2]Haiyan Wang, Wenzhe Shi, Wenjia Bai, Antonio M. Simoes Monteiro de Marvao
, Timothy J. W. Dawes
, Declan P. O'Regan, Philip J. Edwards, Stuart A. Cook, Daniel Rueckert:
Prediction of Clinical Information from Cardiac MRI Using Manifold Learning. FIMH 2015: 91-98
[c1]Wenjia Bai, Devis Peressutti, Sarah Parisot, Ozan Oktay, Martin Rajchl, Declan P. O'Regan, Stuart A. Cook, Andrew P. King, Daniel Rueckert:
Beyond the AHA 17-Segment Model: Motion-Driven Parcellation of the Left Ventricle. STACOM@MICCAI 2015: 13-20- 2014
[j2]Sungsam Gong
, James S. Ware
, Roddy Walsh
, Stuart A. Cook:
NECTAR: a database of codon-centric missense variant annotations. Nucleic Acids Res. 42(Database-Issue): 1013-1019 (2014)- 2010
[j1]Enrico Petretto, Leonardo Bottolo
, Sarah R. Langley
, Matthias Heinig
, Chris McDermott-Roe, Rizwan Sarwar, Michal Pravenec
, Norbert Hübner, Timothy J. Aitman
, Stuart A. Cook, Sylvia Richardson
:
New Insights into the Genetic Control of Gene Expression using a Bayesian Multi-tissue Approach. PLoS Comput. Biol. 6(4) (2010)
Coauthor Index

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