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Bartek Wilczynski
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2010 – 2019
- 2019
- [j13]Rafal Zaborowski, Bartek Wilczynski:
BPscore: An Effective Metric for Meaningful Comparisons of Structural Chromosome Segmentations. J. Comput. Biol. 26(4): 305-314 (2019) - 2017
- [j12]Bartek Wilczynski
, Jerzy Tiuryn:
FastBill: An Improved Tool for Prediction of Cis-Regulatory Modules. J. Comput. Biol. 24(3): 193-199 (2017) - 2015
- [j11]Michal Dabrowski
, Norbert Dojer, Izabella Krystkowiak
, Bozena Kaminska
, Bartek Wilczynski
:
Optimally choosing PWM motif databases and sequence scanning approaches based on ChIP-seq data. BMC Bioinform. 16: 140:1-140:14 (2015) - 2014
- [j10]Pawel Bednarz, Bartek Wilczynski
:
Supervised learning method for predicting chromatin boundary associated insulator elements. J. Bioinform. Comput. Biol. 12(6) (2014) - [c4]Alina Frolova, Bartek Wilczynski:
Fast Parallel Bayesian Networks Reconstruction with BNFinder. IWBBIO 2014: 1179-1184 - 2013
- [j9]Norbert Dojer, Pawel Bednarz, Agnieszka Podsiadlo, Bartek Wilczynski
:
BNFinder2: Faster Bayesian network learning and Bayesian classification. Bioinform. 29(16): 2068-2070 (2013) - [j8]Agnieszka Podsiadlo, Mariusz Wrzesien, Wieslaw Paja
, Witold R. Rudnicki
, Bartek Wilczynski
:
Active enhancer positions can be accurately predicted from chromatin marks and collective sequence motif data. BMC Syst. Biol. 7(S-6): S16 (2013) - 2012
- [j7]Bartek Wilczynski
, Ya-Hsin Liu, Zhen Xuan Yeo, Eileen E. M. Furlong
:
Predicting Spatial and Temporal Gene Expression Using an Integrative Model of Transcription Factor Occupancy and Chromatin State. PLoS Comput. Biol. 8(12) (2012) - [c3]Pawel Bednarz, Bartek Wilczynski:
Modeling Cell Populations in Development using Individual Stochastic Regulatory Networks. SIMULTECH 2012: 334-340 - 2010
- [j6]Bartek Wilczynski
, Torgeir R. Hvidsten:
A Computer Scientist's Guide to the Regulatory Genome. Fundam. Informaticae 103(1-4): 323-332 (2010)
2000 – 2009
- 2009
- [j5]Bartek Wilczynski
, Norbert Dojer:
BNFinder: exact and efficient method for learning Bayesian networks. Bioinform. 25(2): 286-287 (2009) - [j4]Peter J. A. Cock, Tiago Antao
, Jeffrey T. Chang, Brad A. Chapman
, Cymon J. Cox
, Andrew Dalke, Iddo Friedberg
, Thomas Hamelryck
, Frank Kauff, Bartek Wilczynski
, Michiel J. L. de Hoon
:
Biopython: freely available Python tools for computational molecular biology and bioinformatics. Bioinform. 25(11): 1422-1423 (2009) - [j3]Bartek Wilczynski
, Norbert Dojer, Mateusz Patelak, Jerzy Tiuryn
:
Finding evolutionarily conserved cis-regulatory modules with a universal set of motifs. BMC Bioinform. 10 (2009) - 2007
- [c2]Bartek Wilczynski, Jerzy Tiuryn:
Reconstruction of Mammalian Cell Cycle Regulatory Network from Microarray Data Using Stochastic Logical Networks. CMSB 2007: 121-135 - 2006
- [j2]Norbert Dojer, Anna Gambin
, Andrzej Mizera, Bartek Wilczynski
, Jerzy Tiuryn
:
Applying dynamic Bayesian networks to perturbed gene expression data. BMC Bioinform. 7: 249 (2006) - [j1]Bartek Wilczynski
, Torgeir R. Hvidsten
, Andriy Kryshtafovych, Jerzy Tiuryn
, Henryk Jan Komorowski
, Krzysztof Fidelis:
Using local gene expression similarities to discover regulatory binding site modules. BMC Bioinform. 7: 505 (2006) - [c1]Bartek Wilczynski, Jerzy Tiuryn:
Regulatory Network Reconstruction Using Stochastic Logical Networks. CMSB 2006: 142-154
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