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2010 – 2019
- 2019
[j8]Jinyan Chan, Xuan Wang, Jacob A. Turner, Nicole E. Baldwin, Jinghua Gu:
Breaking the paradigm: Dr Insight empowers signature-free, enhanced drug repurposing. Bioinform. 35(16): 2818-2826 (2019)- 2018
- [j7]Xi Chen, Jinghua Gu, Xiao Wang, Jin-Gyoung Jung, Tian-Li Wang, Leena Hilakivi-Clarke, Robert Clarke
, Jianhua Xuan:
CRNET: an efficient sampling approach to infer functional regulatory networks by integrating large-scale ChIP-seq and time-course RNA-seq data. Bioinform. 34(10): 1733-1740 (2018) - 2017
- [j6]Xiao Wang, Jinghua Gu, Leena Hilakivi-Clarke, Robert Clarke, Jianhua Xuan:
DM-BLD: differential methylation detection using a hierarchical Bayesian model exploiting local dependency. Bioinform. 33(2): 161-168 (2017) - [j5]Jinghua Gu, Xuan Wang, Jinyan Chan, Nicole E. Baldwin, Jacob A. Turner:
Phantom: investigating heterogeneous gene sets in time-course data. Bioinform. 33(18): 2957-2959 (2017) - 2014
- [j4]Jinghua Gu, Jianhua Xuan, Rebecca B. Riggins, Li Chen, Yue Joseph Wang, Robert Clarke:
Robust identification of transcriptional regulatory networks using a Gibbs sampler on outlier sum statistic. Bioinform. 30(15): 2242 (2014) - [j3]Jinghua Gu, Xiao Wang, Leena Hilakivi-Clarke, Robert Clarke, Jianhua Xuan:
BADGE: A novel Bayesian model for accurate abundance quantification and differential analysis of RNA-Seq data. BMC Bioinform. 15(S-9): S6 (2014) - [c7]Xiao Wang, Jinghua Gu, Jianhua Xuan, Robert Clarke, Leena Hilakivi-Clarke:
A Markov random field-based Bayesian model to identify genes with differential methylation. CIBCB 2014: 1-8 - 2013
- [b1]Jinghua Gu:
Novel Monte Carlo Approaches to Identify Aberrant Pathways in Cancer. Virginia Tech, Blacksburg, VA, USA, 2013 - [j2]Xu Shi, Jinghua Gu, Xi Chen, Ayesha N. Shajahan, Leena Hilakivi-Clarke, Robert Clarke, Jianhua Xuan:
mAPC-GibbsOS: an integrated approach for robust identification of gene regulatory networks. BMC Syst. Biol. 7(S-5): S4 (2013) - [c6]Jinghua Gu, Jianhua Xuan, Xiao Wang, Ayesha N. Shajahan, Leena Hilakivi-Clarke, Robert Clarke:
Reconstructing transcriptional regulatory networks by probabilistic network component analysis. BCB 2013: 96 - 2012
- [j1]Jinghua Gu, Jianhua Xuan, Rebecca B. Riggins, Li Chen, Yue Joseph Wang, Robert Clarke:
Robust identification of transcriptional regulatory networks using a Gibbs sampler on outlier sum statistic. Bioinform. 28(15): 1990-1997 (2012) - [c5]Jinghua Gu, Jianhua Xuan, Chen Wang, Li Chen, Tian-Li Wang, Ie-Ming Shih:
Detecting aberrant signal transduction pathways from high-throughput data using GIST algorithm. CIBCB 2012: 267-274 - [c4]Xiao Wang, Jinghua Gu, Jianhua Xuan, Ayesha N. Shajahan, Robert Clarke, Li Chen:
Sampling-Based Subnetwork Identification from Microarray Data and Protein-Protein Interaction Network. ICMLA (2) 2012: 158-163 - [c3]Li Chen, Jianhua Xuan, Jinghua Gu, Yue Wang, Zhen Zhang, Tian-Li Wang, Ie-Ming Shih:
Integrative Network Analysis to Identify Aberrant Pathway Networks in Ovarian Cancer. Pacific Symposium on Biocomputing 2012: 31-42 - 2011
- [c2]Jinghua Gu, Chen Wang, Ie-Ming Shih, Tian-Li Wang, Yue Wang, Robert Clarke, Jianhua Xuan:
GIST: A Gibbs sampler to identify intracellular signal transduction pathways. EMBC 2011: 2434-2437 - 2010
- [c1]Jinghua Gu, Jianhua Xuan, Yue Joseph Wang, Rebecca B. Riggins, Robert Clarke:
Identification of Transcriptional Regulatory Networks by Learning the Marginal Function of Outlier Sum Statistic. ICMLA 2010: 281-286
Coauthor Index
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