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ORCIDEwa Szczurek
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2020 – today
- 2023
[i4]Paulina Szymczak, Ewa Szczurek:
Artificial intelligence-driven antimicrobial peptide discovery. CoRR abs/2308.10921 (2023)- [i3]Adam Izdebski, Ewelina Weglarz-Tomczak, Ewa Szczurek, Jakub M. Tomczak:
De Novo Drug Design with Joint Transformers. CoRR abs/2310.02066 (2023) - 2022
- [c5]Krzysztof Koras, Marcin Mozejko, Paulina Szymczak, Adam Izdebski, Eike Staub, Ewa Szczurek:
A generative recommender system with GMM prior for cancer drug generation and sensitivity prediction. MLCB 2022: 61-73 - [i2]Krzysztof Koras, Marcin Mozejko, Paulina Szymczak, Eike Staub, Ewa Szczurek:
A generative recommender system with GMM prior for cancer drug generation and sensitivity prediction. CoRR abs/2206.03555 (2022) - 2020
- [j12]Ewa Szczurek
, Tyll Krüger, Barbara Klink, Niko Beerenwinkel:
A mathematical model of the metastatic bottleneck predicts patient outcome and response to cancer treatment. PLoS Comput. Biol. 16(10) (2020)
2010 – 2019
- 2019
- [j11]Jerzy Tiuryn, Ewa Szczurek:
Learning signaling networks from combinatorial perturbations by exploiting siRNA off-target effects. Bioinform. 35(14): i605-i614 (2019) - [j10]Dariusz Matlak, Ewa Szczurek:
Correction: Epistasis in genomic and survival data of cancer patients. PLoS Comput. Biol. 15(2) (2019) - [i1]David Laehnemann, Johannes Köster, Ewa Szczurek, Davis J. McCarthy, Stephanie C. Hicks, Mark D. Robinson, Catalina A. Vallejos, Niko Beerenwinkel, Kieran R. Campbell, Ahmed Mahfouz, Luca Pinello, Pavel Skums, Alexandros Stamatakis, Camille Stephan-Otto Attolini, Samuel Aparicio, Jasmijn A. Baaijens, Marleen Balvert, Buys de Barbanson, Antonio Cappuccio, Giacomo Corleone, Bas E. Dutilh, Maria Florescu, Victor Guryev, Rens Holmer, Katharina Jahn, Thamar Jessurun Lobo, Emma M. Keizer, Indu Khatri, Szymon M. Kielbasa, Jan O. Korbel, Alexey M. Kozlov, Tzu-Hao Kuo, Boudewijn P. F. Lelieveldt, Ion I. Mandoiu, John C. Marioni, Tobias Marschall, Felix Mölder, Amir Niknejad, Lukasz Raczkowski, Marcel J. T. Reinders, Jeroen de Ridder, Antoine-Emmanuel Saliba, Antonios Somarakis, Oliver Stegle, Fabian J. Theis, Huan Yang, Alex Zelikovsky, Alice C. McHardy, Benjamin J. Raphael, Sohrab P. Shah, Alexander Schönhuth:
12 Grand Challenges in Single-Cell Data Science. PeerJ Prepr. 7: e27885 (2019) - 2017
- [j9]Dariusz Matlak, Ewa Szczurek:
Epistasis in genomic and survival data of cancer patients. PLoS Comput. Biol. 13(7) (2017) - [c4]Dariusz Matlak, Ewa Szczurek:
Epistasis in Genomic and Survival Data of Cancer Patients. RECOMB 2017: 385-386 - 2016
- [j8]Simona Constantinescu, Ewa Szczurek, Pejman Mohammadi, Jörg Rahnenführer, Niko Beerenwinkel:
TiMEx: a waiting time model for mutually exclusive cancer alterations. Bioinform. 32(7): 968-975 (2016) - [j7]Ewa Szczurek, Niko Beerenwinkel:
Linear effects models of signaling pathways from combinatorial perturbation data. Bioinform. 32(12): 297-305 (2016) - 2014
- [j6]Navodit Misra, Ewa Szczurek, Martin Vingron:
Inferring the paths of somatic evolution in cancer. Bioinform. 30(17): 2456-2463 (2014) - [j5]Ewa Szczurek, Niko Beerenwinkel:
Modeling Mutual Exclusivity of Cancer Mutations. PLoS Comput. Biol. 10(3) (2014) - [c3]Ewa Szczurek, Niko Beerenwinkel:
Modeling Mutual Exclusivity of Cancer Mutations. RECOMB 2014: 307-308 - 2011
- [b1]Ewa Szczurek:
Modeling signal transduction pathways and their transcriptional response. Free University of Berlin, 2011 - [j4]Ewa Szczurek, Florian Markowetz, Irit Gat-Viks, Przemyslaw Biecek, Jerzy Tiuryn, Martin Vingron:
Deregulation upon DNA damage revealed by joint analysis of context-specific perturbation data. BMC Bioinform. 12: 249 (2011) - 2010
- [j3]Ewa Szczurek, Przemyslaw Biecek, Jerzy Tiuryn, Martin Vingron:
Introducing Knowledge into Differential Expression Analysis. J. Comput. Biol. 17(8): 953-967 (2010)
2000 – 2009
- 2009
- [j2]Anna Gambin, Ewa Szczurek, Janusz Dutkowski, Magda Bakun, Michal Dadlez:
Classification of peptide mass fingerprint data by novel no-regret boosting method. Comput. Biol. Medicine 39(5): 460-473 (2009) - [j1]Mikhail A. Roytberg, Anna Gambin, Laurent Noé, Slawomir Lasota, Eugenia Furletova, Ewa Szczurek, Gregory Kucherov:
On Subset Seeds for Protein Alignment. IEEE ACM Trans. Comput. Biol. Bioinform. 6(3): 483-494 (2009) - 2008
- [c2]Mikhail A. Roytberg, Anna Gambin, Laurent Noé, Slawomir Lasota, Eugenia Furletova, Ewa Szczurek, Gregory Kucherov:
Efficient Seeding Techniques for Protein Similarity Search. BIRD 2008: 466-478 - 2007
- [c1]Anna Gambin, Ewa Szczurek:
No-Regret Boosting. ICANNGA (1) 2007: 422-431
Coauthor Index
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