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Michael L. Bittner
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2020 – today
- 2022
- [j32]Radhika Saraf
, Aniruddha Datta
, Chao Sima, Jianping Hua, Rosana Lopes, Michael L. Bittner, Tasha Miller, Heather M. Wilson-Robles:
In Silico Modeling of the Induction of Apoptosis by Cryptotanshinone in Osteosarcoma Cell Lines. IEEE ACM Trans. Comput. Biol. Bioinform. 19(3): 1683-1693 (2022) - 2020
- [j31]Rajan Kapoor
, Aniruddha Datta
, Chao Sima, Jianping Hua, Rosana Lopes, Michael L. Bittner:
A Gaussian Mixture-Model Exploiting Pathway Knowledge for Dissecting Cancer Heterogeneity. IEEE ACM Trans. Comput. Biol. Bioinform. 17(2): 459-468 (2020) - [j30]Haswanth Vundavilli
, Aniruddha Datta
, Chao Sima, Jianping Hua, Rosana Lopes, Michael L. Bittner:
In Silico Design and Experimental Validation of Combination Therapy for Pancreatic Cancer. IEEE ACM Trans. Comput. Biol. Bioinform. 17(3): 1010-1018 (2020) - [j29]Haswanth Vundavilli
, Aniruddha Datta
, Chao Sima, Jainping Hua, Rosana Lopes, Michael L. Bittner:
Cryptotanshinone Induces Cell Death in Lung Cancer by Targeting Aberrant Feedback Loops. IEEE J. Biomed. Health Informatics 24(8): 2430-2438 (2020)
2010 – 2019
- 2019
- [j28]Haswanth Vundavilli
, Aniruddha Datta
, Chao Sima, Jianping Hua, Rosana Lopes, Michael L. Bittner:
Bayesian Inference Identifies Combination Therapeutic Targets in Breast Cancer. IEEE Trans. Biomed. Eng. 66(9): 2684-2692 (2019) - 2018
- [j27]Ashish Katiyar, Anwoy Kumar Mohanty, Jianping Hua, Chao Sima, Rosana Lopes, Aniruddha Datta, Michael L. Bittner:
A Bayesian approach to determine the composition of heterogeneous cancer tissue. BMC Bioinform. 19-S(3): 45-58 (2018) - 2017
- [c15]Ashish Katiyar, Anwoy Kumar Mohanty, Chao Sima, Jianping Hua, Rosana Lopes, Aniruddha Datta, Michael L. Bittner:
A Bayesian Approach to Determine the Composition of Heterogeneous Cancer Tissue. BCB 2017: 773-774 - 2016
- [c14]Chao Sima, Jianping Hua, Rosana Lopes, Aniruddha Datta, Michael L. Bittner:
Detecting Cell Growth and Drug Response in Heterogeneous Populations: A Dynamic Imaging Approach. BIBE 2016: 121-128 - 2015
- [j26]Daniel N. Mohsenizadeh, Jianping Hua, Michael L. Bittner, Edward R. Dougherty:
Dynamical modeling of uncertain interaction-based genomic networks. BMC Bioinform. 16(S13): S3 (2015) - 2013
- [c13]Xiangfang Li, Lijun Qian, Michael L. Bittner, Edward R. Dougherty:
Drug effect study on proliferation and survival pathways on cell line-based platform: A stochastic hybrid systems approach. GENSiPS 2013: 54-57 - 2012
- [j25]Chen Zhao, Jianping Hua, Michael L. Bittner, Ivan Ivanov, Edward R. Dougherty:
Identifying mechanistic similarities in drug responses. Bioinform. 28(14): 1902-1910 (2012) - 2011
- [j24]Ritwik Layek, Aniruddha Datta, Michael L. Bittner, Edward R. Dougherty:
Cancer therapy design based on pathway logic. Bioinform. 27(4): 548-555 (2011) - [j23]Xiangfang Li, Lijun Qian, Michael L. Bittner, Edward R. Dougherty:
Characterization of Drug Efficacy Regions Based on Dosage and Frequency Schedules. IEEE Trans. Biomed. Eng. 58(3): 488-498 (2011) - [c12]Ritwik Layek, Aniruddha Datta, Michael L. Bittner, Edward R. Dougherty:
Combination therapy design for cancer: A digital systems approach. CDC/ECC 2011: 4377-4382 - [c11]Xiangfang Li, Lijun Qian, Michael L. Bittner, Edward R. Dougherty:
Assessing the efficacy of molecularly targeted agents by using Kalman filter. GENSiPS 2011: 50-51 - [c10]Chen Zhao, Ivan Ivanov, Michael L. Bittner, Edward R. Dougherty:
Pathway analysis in the context of Bayesian networks - mathematical modeling of master and canalizing genes. GENSiPS 2011: 64-65 - 2010
- [j22]Blaise Hanczar, Jianping Hua, Chao Sima, John N. Weinstein
, Michael L. Bittner, Edward R. Dougherty:
Small-sample precision of ROC-related estimates. Bioinform. 26(6): 822-830 (2010) - [j21]Edward R. Dougherty, Ranadip Pal
, Xiaoning Qian, Michael L. Bittner, Aniruddha Datta:
Stationary and structural control in gene regulatory networks: basic concepts. Int. J. Syst. Sci. 41(1): 5-16 (2010)
2000 – 2009
- 2009
- [j20]Qian Xu, Jianping Hua, Zixiang Xiong, Michael L. Bittner, Edward R. Dougherty:
The effect of microarray image compression on expression-based classification. Signal Image Video Process. 3(1): 53-61 (2009) - [j19]Edward R. Dougherty, Marcel Brun
, Jeffrey M. Trent, Michael L. Bittner:
Conditioning-Based Modeling of Contextual Genomic Regulation. IEEE ACM Trans. Comput. Biol. Bioinform. 6(2): 310-320 (2009) - [c9]Ina Sen, Michael P. Verdicchio, Sungwon Jung, Robert P. Trevino, Michael L. Bittner:
Context-Specific Gene Regulations in Cancer Gene Expression Data. Pacific Symposium on Biocomputing 2009: 75-86 - 2008
- [j18]David Correa Martins Jr., Ulisses M. Braga-Neto, Ronaldo Fumio Hashimoto
, Michael L. Bittner, Edward R. Dougherty:
Intrinsically Multivariate Predictive Genes. IEEE J. Sel. Top. Signal Process. 2(3): 424-439 (2008) - 2007
- [j17]Nestor Walter Trepode, Hugo Aguirre Armelin, Michael L. Bittner, Junior Barrera
, Marco Dimas Gubitoso
, Ronaldo Fumio Hashimoto
:
A Robust Structural PGN Model for Control of Cell-Cycle Progression Stabilized by Negative Feedbacks. EURASIP J. Bioinform. Syst. Biol. 2007 (2007) - [c8]Nestor Walter Trepode, Hugo Aguirre Armelin, Michael L. Bittner, Junior Barrera, Marco Dimas Gubitoso, Ronaldo Fumio Hashimoto:
A structural PGN model for control of cell-cycle Progression. ISMM (2) 2007: 79-80 - 2006
- [j16]Ashish Choudhary, Aniruddha Datta, Michael L. Bittner, Edward R. Dougherty:
Intervention in a family of Boolean networks. Bioinform. 22(2): 226-232 (2006) - [j15]Jianping Hua, Yoganand Balagurunathan, Yidong Chen, James Lowey, Michael L. Bittner, Zixiang Xiong, Edward Suh, Edward R. Dougherty:
Normalization Benefits Microarray-Based Classification. EURASIP J. Bioinform. Syst. Biol. 2006 (2006) - [c7]Ashish Choudhary, Aniruddha Datta, Michael L. Bittner, Edward R. Dougherty:
Optimal Control in a Family of Boolean Networks. CDC 2006: 4200-4205 - 2005
- [j14]Ranadip Pal
, Aniruddha Datta, Michael L. Bittner, Edward R. Dougherty:
Intervention in context-sensitive probabilistic Boolean networks. Bioinform. 21(7): 1211-1218 (2005) - [j13]Ranadip Pal
, Aniruddha Datta, Albert J. Fornace Jr.
, Michael L. Bittner, Edward R. Dougherty:
Boolean relationships among genes responsive to ionizing radiation in the NCI 60 ACDS. Bioinform. 21(8): 1542-1549 (2005) - [j12]Ranadip Pal
, Ivan Ivanov, Aniruddha Datta, Michael L. Bittner, Edward R. Dougherty:
Generating Boolean networks with a prescribed attractor structure. Bioinform. 21(21): 4021-4025 (2005) - [c6]Ranadip Pal, Aniruddha Datta, Michael L. Bittner, Edward R. Dougherty:
External control in a special class of probabilistic Boolean networks. ACC 2005: 411-416vol.1 - [c5]Ashish Choudhary, Aniruddha Datta, Michael L. Bittner, Edward R. Dougherty:
Assignment of terminal penalties in controlling genetic regulatory networks. ACC 2005: 417-422vol.1 - [c4]Prabhdeep Singh, R. Bhimavarapu, Hasan Davulcu, Chitta Baral, Seungchan Kim
, Huan Liu, Michael L. Bittner, I. V. Ramakrishnan:
BioLog: A Browser Based Collaboration and Resource Navigation Assistant for BioMedical Researchers. DILS 2005: 19-30 - 2004
- [j11]Aniruddha Datta, Ashish Choudhary, Michael L. Bittner, Edward R. Dougherty:
External control in Markovian genetic regulatory networks: the imperfect information case. Bioinform. 20(6): 924-930 (2004) - [j10]Ronaldo Fumio Hashimoto
, Seungchan Kim
, Ilya Shmulevich, Wei Zhang, Michael L. Bittner, Edward R. Dougherty:
Growing genetic regulatory networks from seed genes. Bioinform. 20(8): 1241-1247 (2004) - [j9]Sanju Attoor, Edward R. Dougherty, Yidong Chen, Michael L. Bittner, Jeffrey M. Trent:
Which is better for cDNA-microarray-based classification: ratios or direct intensities. Bioinform. 20(16): 2513-2520 (2004) - [j8]Xiaobo Zhou, Xiaodong Wang, Ranadip Pal
, Ivan Ivanov, Michael L. Bittner, Edward R. Dougherty:
A Bayesian connectivity-based approach to constructing probabilistic gene regulatory networks. Bioinform. 20(17): 2918-2927 (2004) - [j7]Edward R. Dougherty, Ilya Shmulevich, Michael L. Bittner:
Genomic Signal Processing: The Salient Issues. EURASIP J. Adv. Signal Process. 2004(1): 146-153 (2004) - 2003
- [j6]Aniruddha Datta, Ashish Choudhary, Michael L. Bittner, Edward R. Dougherty:
External Control in Markovian Genetic Regulatory Networks. Mach. Learn. 52(1-2): 169-191 (2003) - [j5]Ronaldo Fumio Hashimoto
, Edward R. Dougherty, Marcel Brun
, Zheng-Zheng Zhou, Michael L. Bittner, Jeffrey M. Trent:
Efficient selection of feature sets possessing high coefficients of determination based on incremental determinations. Signal Process. 83(4): 695-712 (2003) - [c3]Aniruddha Datta, Ashish Choudhary, Michael L. Bittner, Edward R. Dougherty:
External control in Markovian genetic regulatory networks. ACC 2003: 3614-3619 - [c2]Aniruddha Datta, Ashish Choudhary, Michael L. Bittner, Edward R. Dougherty:
Application of dynamic programming in genetic regulatory networks. CDC 2003: 2817-2822 - 2002
- [j4]Mattias Wahde, Gregory T. Klus, Michael L. Bittner, Yidong Chen, Zoltan Szallasi
:
Assessing the significance of consistently mis-regulated genes in cancer associated gene expression matrices. Bioinform. 18(3): 389-394 (2002) - [j3]Yidong Chen, Vishnu G. Kamat, Edward R. Dougherty, Michael L. Bittner, Paul S. Meltzer, Jeffrey M. Trent:
Ratio statistics of gene expression levels and applications to microarray data analysis. Bioinform. 18(9): 1207-1215 (2002) - [j2]Edward R. Dougherty, Junior Barrera
, Marcel Brun
, Seungchan Kim
, Roberto Marcondes Cesar Junior
, Yidong Chen, Michael L. Bittner, Jeffrey M. Trent:
Inference from Clustering with Application to Gene-Expression Microarrays. J. Comput. Biol. 9(1): 105-126 (2002) - [j1]Seungchan Kim
, Edward R. Dougherty, Junior Barrera
, Yidong Chen, Michael L. Bittner, Jeffrey M. Trent:
Strong Feature Sets from Small Samples. J. Comput. Biol. 9(1): 127-146 (2002)
1990 – 1999
- 1999
- [c1]Edward R. Dougherty, Michael L. Bittner, Yidong Chen, Seungchan Kim, Krishnamoorthy Sivakumar, Junior Barrera, Paul S. Meltzer, Jeffrey M. Trent:
Nonlinear filters in genomic control. NSIP 1999: 10-14
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