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Ryo Yoshida
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2020 – today
- 2024
- [c25]Ryo Yoshida, Taiga Someya, Yohei Oseki:
Tree-Planted Transformers: Unidirectional Transformer Language Models with Implicit Syntactic Supervision. ACL (Findings) 2024: 5120-5134 - [c24]Taiga Someya, Ryo Yoshida, Yohei Oseki:
Targeted Syntactic Evaluation on the Chomsky Hierarchy. LREC/COLING 2024: 15595-15605 - [i13]Tatsuki Kuribayashi, Ryo Ueda, Ryo Yoshida, Yohei Oseki, Ted Briscoe, Timothy Baldwin:
Emergent Word Order Universals from Cognitively-Motivated Language Models. CoRR abs/2402.12363 (2024) - [i12]Ryo Yoshida, Taiga Someya, Yohei Oseki:
Tree-Planted Transformers: Large Language Models with Implicit Syntactic Supervision. CoRR abs/2402.12691 (2024) - [i11]Kohei Noda, Araki Wakiuchi, Yoshihiro Hayashi, Ryo Yoshida:
Advancing Extrapolative Predictions of Material Properties through Learning to Learn. CoRR abs/2404.08657 (2024) - 2023
- [j25]Mitsuhide Sato
, Keigo Takazawa, Ryo Yoshida, Masami Nirei, Tsutomu Mizuno:
Expansion of Motor High-Efficiency Area by Inserting Magnetic Composite Material into Rotor. IEEE Access 11: 34772-34782 (2023) - [j24]Mitsuru Ohno
, Yoshihiro Hayashi
, Qi Zhang, Yu Kaneko
, Ryo Yoshida
:
SMiPoly: Generation of a Synthesizable Polymer Virtual Library Using Rule-Based Polymerization Reactions. J. Chem. Inf. Model. 63(17): 5539-5548 (2023) - [c23]Shunya Minami, Kenji Fukumizu, Yoshihiro Hayashi, Ryo Yoshida:
Transfer Learning with Affine Model Transformation. NeurIPS 2023 - 2022
- [j23]Megumi Iwayama
, Stephen Wu
, Chang Liu
, Ryo Yoshida
:
Functional Output Regression for Machine Learning in Materials Science. J. Chem. Inf. Model. 62(20): 4837-4851 (2022) - [c22]Ryo Yoshida, Yohei Oseki:
Composition, Attention, or Both? EMNLP (Findings) 2022: 5822-5834 - [i10]Minoru Kusaba, Chang Liu, Ryo Yoshida:
Crystal structure prediction with machine learning-based element substitution. CoRR abs/2201.11188 (2022) - [i9]Qi Zhang, Chang Liu, Stephen Wu, Ryo Yoshida:
Bayesian Sequential Stacking Algorithm for Concurrently Designing Molecules and Synthetic Reaction Networks. CoRR abs/2204.01847 (2022) - [i8]Shunya Minami, Kenji Fukumizu, Yoshihiro Hayashi, Ryo Yoshida:
Transfer learning with affine model transformation. CoRR abs/2210.09745 (2022) - [i7]Ryo Yoshida, Yohei Oseki:
Composition, Attention, or Both? CoRR abs/2210.12958 (2022) - 2021
- [c21]Shunya Minami, Song Liu, Stephen Wu, Kenji Fukumizu, Ryo Yoshida:
A General Class of Transfer Learning Regression without Implementation Cost. AAAI 2021: 8992-8999 - [c20]Tatsuki Kuribayashi, Yohei Oseki, Takumi Ito
, Ryo Yoshida, Masayuki Asahara, Kentaro Inui:
Lower Perplexity is Not Always Human-Like. ACL/IJCNLP (1) 2021: 5203-5217 - [c19]Ryo Yoshida, Hiroshi Noji, Yohei Oseki:
Modeling Human Sentence Processing with Left-Corner Recurrent Neural Network Grammars. EMNLP (1) 2021: 2964-2973 - [i6]Tatsuki Kuribayashi, Yohei Oseki, Takumi Ito, Ryo Yoshida, Masayuki Asahara, Kentaro Inui:
Lower Perplexity is Not Always Human-Like. CoRR abs/2106.01229 (2021) - [i5]Ryo Yoshida, Hiroshi Noji, Yohei Oseki:
Modeling Human Sentence Processing with Left-Corner Recurrent Neural Network Grammars. CoRR abs/2109.04939 (2021) - 2020
- [j22]Zhongliang Guo
, Stephen Wu
, Mitsuru Ohno
, Ryo Yoshida
:
Bayesian Algorithm for Retrosynthesis. J. Chem. Inf. Model. 60(10): 4474-4486 (2020) - [i4]Zhongliang Guo, Stephen Wu, Mitsuru Ohno, Ryo Yoshida:
A Bayesian algorithm for retrosynthesis. CoRR abs/2003.03190 (2020) - [i3]Shunya Minami, Song Liu, Stephen Wu, Kenji Fukumizu, Ryo Yoshida:
A General Class of Transfer Learning Regression without Implementation Cost. CoRR abs/2006.13228 (2020)
2010 – 2019
- 2019
- [j21]Yumi Kawamura, Shinsuke Koyama, Ryo Yoshida:
Statistical inference of the rate of RNA polymerase II elongation by total RNA sequencing. Bioinform. 35(11): 1877-1884 (2019) - [i2]Minoru Kusaba, Chang Liu, Yukinori Koyama, Kiyoyuki Terakura, Ryo Yoshida:
Recreation of the Periodic Table with an Unsupervised Machine Learning Algorithm. CoRR abs/1912.10708 (2019) - 2018
- [j20]Osamu Hirose
, Shotaro Kawaguchi, Terumasa Tokunaga, Yu Toyoshima
, Takayuki Teramoto
, Sayuri Kuge, Takeshi Ishihara, Yuichi Iino, Ryo Yoshida:
SPF-CellTracker: Tracking Multiple Cells with Strongly-Correlated Moves Using a Spatial Particle Filter. IEEE ACM Trans. Comput. Biol. Bioinform. 15(6): 1822-1831 (2018) - 2017
- [j19]Hisaki Ikebata, Kenta Hongo
, Tetsu Isomura, Ryo Maezono, Ryo Yoshida
:
Bayesian molecular design with a chemical language model. J. Comput. Aided Mol. Des. 31(4): 379-391 (2017) - 2016
- [j18]Yu Toyoshima
, Terumasa Tokunaga, Osamu Hirose
, Manami Kanamori, Takayuki Teramoto
, Moon Sun Jang
, Sayuri Kuge, Takeshi Ishihara, Ryo Yoshida, Yuichi Iino:
Accurate Automatic Detection of Densely Distributed Cell Nuclei in 3D Space. PLoS Comput. Biol. 12(6) (2016) - 2015
- [j17]Hisaki Ikebata, Ryo Yoshida:
Repulsive parallel MCMC algorithm for discovering diverse motifs from large sequence sets. Bioinform. 31(10): 1561-1568 (2015) - [i1]Osamu Hirose, Shotaro Kawaguchi, Terumasa Tokunaga, Yu Toyoshima, Takayuki Teramoto, Sayuri Kuge, Takeshi Ishihara, Yuichi Iino, Ryo Yoshida:
SPF-CellTracker: Tracking multiple cells with strongly-correlated moves using a spatial particle filter. CoRR abs/1508.06464 (2015) - 2014
- [j16]Terumasa Tokunaga, Osamu Hirose
, Shotaro Kawaguchi, Yu Toyoshima
, Takayuki Teramoto
, Hisaki Ikebata, Sayuri Kuge, Takeshi Ishihara, Yuichi Iino, Ryo Yoshida:
Automated detection and tracking of many cells by using 4D live-cell imaging data. Bioinform. 30(12): 43-51 (2014) - [j15]Hiroshi Yamashita, Tomoyuki Higuchi, Ryo Yoshida:
Atom Environment Kernels on Molecules. J. Chem. Inf. Model. 54(5): 1289-1300 (2014) - 2013
- [c18]Ryo Yoshida:
Self-oscillating polymer gels as novel biomimetic materials. EMBC 2013: 318-321 - [c17]Tatsuya Ishikawa, Ryo Yoshida, Keita Takahashi, Hiroshi Inoue, Akira Kobayashi:
A study on EGG affected by viscosity and shear rate dependence of fluid and semi-solid diets. EMBC 2013: 1326-1329 - 2012
- [j14]Shuichi Kawano
, Teppei Shimamura
, Atsushi Niida, Seiya Imoto, Rui Yamaguchi, Masao Nagasaki
, Ryo Yoshida, Cristin G. Print
, Satoru Miyano
:
Identifying Gene Pathways Associated with Cancer Characteristics via Sparse Statistical Methods. IEEE ACM Trans. Comput. Biol. Bioinform. 9(4): 966-972 (2012) - 2011
- [j13]Yoshinori Tamada
, Rui Yamaguchi, Seiya Imoto, Osamu Hirose
, Ryo Yoshida, Masao Nagasaki
, Satoru Miyano
:
SiGN-SSM: open source parallel software for estimating gene networks with state space models. Bioinform. 27(8): 1172-1173 (2011) - 2010
- [j12]Ryo Yoshida, Masaya M. Saito, Hiromichi Nagao, Tomoyuki Higuchi:
Bayesian experts in exploring reaction kinetics of transcription circuits. Bioinform. 26(18) (2010) - [j11]Ryo Yoshida, Mike West:
Bayesian Learning in Sparse Graphical Factor Models via Variational Mean-Field Annealing. J. Mach. Learn. Res. 11: 1771-1798 (2010) - [j10]Ryo Yoshida:
Design of Self-Oscillating Gels and Application to Biomimetic Actuators. Sensors 10(3): 1810-1822 (2010) - [c16]Shuichi Kawano
, Teppei Shimamura
, Atsushi Niida, Seiya Imoto, Rui Yamaguchi, Masao Nagasaki
, Ryo Yoshida, Cristin G. Print
, Satoru Miyano:
Discovering functional gene pathways associated with cancer heterogeneity via sparse supervised learning. BIBM 2010: 253-258 - [c15]Keisuke Hayashi, Masaya M. Saito, Ryo Yoshida, Tomoyuki Higuchi:
Implementation of Sequential Importance Sampling in GPGPU. FUSION 2010: 1-6
2000 – 2009
- 2009
- [c14]Yusuke Hara, Shingo Maeda
, Ryo Yoshida, Shuji Hashimoto:
Development of novel self-oscillating molecular robot fueled by organic acid. IROS 2009: 2223-2227 - [c13]Shingo Maeda
, Yusuke Hara, Ryo Yoshida, Shuji Hashimoto:
Chemical robot-design of peristaltic polymer gel actuator-. IROS 2009: 4325-4330 - [c12]Kazuyuki Nakamura, Ryo Yoshida, Masao Nagasaki, Satoru Miyano, Tomoyuki Higuchi:
Parameter Estimation of In Silico Biological Pathways with Particle Filtering Towards a Petascale Computing. Pacific Symposium on Biocomputing 2009: 227-238 - 2008
- [j9]Shingo Maeda
, Yusuke Hara
, Ryo Yoshida, Shuji Hashimoto:
Self-Oscillating Gel Actuator for Chemical Robotics. Adv. Robotics 22(12): 1329-1342 (2008) - [j8]Osamu Hirose
, Ryo Yoshida, Seiya Imoto, Rui Yamaguchi, Tomoyuki Higuchi, Stephen D. Charnock-Jones
, Cristin G. Print
, Satoru Miyano
:
Statistical inference of transcriptional module-based gene networks from time course gene expression profiles by using state space models. Bioinform. 24(7): 932-942 (2008) - [j7]Ryo Yoshida, Masao Nagasaki
, Rui Yamaguchi, Seiya Imoto, Satoru Miyano
, Tomoyuki Higuchi:
Bayesian learning of biological pathways on genomic data assimilation. Bioinform. 24(22): 2592-2601 (2008) - [j6]Kazuyuki Numata, Ryo Yoshida, Masao Nagasaki
, Ayumu Saito, Seiya Imoto, Satoru Miyano
:
ExonMiner: Web service for analysis of GeneChip Exon array data. BMC Bioinform. 9 (2008) - [c11]Osamu Hirose
, Ryo Yoshida, Rui Yamaguchi, Seiya Imoto, Tomoyuki Higuchi, Satoru Miyano:
Analyzing Time Course Gene Expression Data with Biological and Technical Replicates to Estimate Gene Networks by State Space Models. Asia International Conference on Modelling and Simulation 2008: 940-946 - [c10]Ryo Yoshida, Michiaki Yasumura:
A New Cell Phone Remote Control for People with Visual Impairment. ICCHP 2008: 1145-1152 - 2007
- [j5]Rui Yamaguchi, Ryo Yoshida, Seiya Imoto, Tomoyuki Higuchi, Satoru Miyano:
Finding module-based gene networks with state-space models - Mining high-dimensional and short time-course gene expression data. IEEE Signal Process. Mag. 24(1): 37-46 (2007) - [c9]Ryo Yoshida, Kazuyuki Numata, Seiya Imoto, Masao Nagasaki, Atsushi Doi, Kazuko Ueno, Satoru Miyano:
Computational Genome-Wide Discovery of Aberrant Splice Variations with Exon Expression Profiles. BIBE 2007: 715-722 - [c8]Shingo Maeda
, Yusuke Hara, Ryo Yoshida, Shuji Hashimoto:
Chemical robot - Design of self-walking gel. IROS 2007: 2150-2155 - [c7]Pramod K. Gupta
, Ryo Yoshida, Seiya Imoto, Rui Yamaguchi, Satoru Miyano:
Statistical Absolute Evaluation of Gene Ontology Terms with Gene Expression Data. ISBRA 2007: 146-157 - 2006
- [j4]Ryo Yoshida, Tomoyuki Higuchi, Seiya Imoto, Satoru Miyano
:
ArrayCluster: an analytic tool for clustering, data visualization and module finder on gene expression profiles. Bioinform. 22(12): 1538-1539 (2006) - [c6]Michiaki Yasumura, Ryo Yoshida, Megumi Yoshida:
Prototyping and Evaluation of New Remote Controls for People with Visual Impairment. ICCHP 2006: 461-468 - 2005
- [c5]Ryo Yoshida, Seiya Imoto, Tomoyuki Higuchi:
Estimating Time-Dependent Gene Networks from Time Series Microarray Data by Dynamic Linear Models with Markov Switching. CSB 2005: 289-298 - [c4]Ryo Yoshida, Seiya Imoto, Tomoyuki Higuchi:
A Penalized Likelihood Estimation on Transcriptional Module-Based Clustering. ICCSA (3) 2005: 389-401 - 2004
- [c3]Ryo Yoshida, Tomoyuki Higuchi, Seiya Imoto:
A Mixed Factors Model for Dimension Reduction and Extraction of a Group Structure in Gene Expression Data. CSB 2004: 161-172 - [c2]Shingo Maeda, Shuji Hashimoto, Ryo Yoshida:
Design of chemo-mechanical actuator using self-oscillating gel. ROBIO 2004: 474-479 - 2000
- [j3]Ryo Yoshida, Takaaki Murao, Tatsuo Miyazawa:
3D web environment for knowledge management. Future Gener. Comput. Syst. 17(1): 73-78 (2000)
1990 – 1999
- 1998
- [c1]Ryo Yoshida, Carmine F. Greco:
Reactive Virtual Environment System: LivingWorlds multi-user world. EGVE 1998: 204-215 - 1996
- [j2]Ryutarou Ohbuchi, Tatsuo Miyazawa, Masaki Aono, Akio Koide, Masahiko Kimura, Ryo Yoshida:
Integrated medical-image system for cancer research and treatment. IBM J. Res. Dev. 40(2): 185-210 (1996) - 1993
- [j1]Ryo Yoshida, Tatsuo Miyazawa, Akio Doi, Taisuke Otsuki:
Clinical planning support system-CliPSS. IEEE Computer Graphics and Applications 13(6): 76-84 (1993)
Coauthor Index
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last updated on 2024-08-23 19:24 CEST by the dblp team
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