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ORCIDLi Xie 0002
Person information
- affiliation: City University of New York, Hunter College, Department of Computer Science, NY, USA
- affiliation (former): University of California San Diego, Skaggs School of Pharmacy and Pharmaceutical Sciences, La Jolla, CA, USA
Other persons with the same name
- Li Xie — disambiguation page
- Li Xie 0001 — Nanjing University, Department of Computer Science and Technology, State Key Laboratory for Novel Software Technology, China
- Li Xie 0003
![[0000-0001-7808-3115]](https://dblp1.uni-trier.de/img/orcid-mark.12x12.png "0000-0001-7808-3115")
— Tongji University, College of Electronics and Information Engineering, Shanghai, China
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Journal Articles
- 2023
[j8]Tian Cai, Li Xie, Shuo Zhang, Muge Chen, Di He, Amitesh Badkul, Yang Liu, Hari Krishna Namballa, Michael Dorogan, Wayne W. Harding, Cameron Mura, Philip E. Bourne, Lei Xie:
End-to-end sequence-structure-function meta-learning predicts genome-wide chemical-protein interactions for dark proteins. PLoS Comput. Biol. 19(1) (2023)- [j7]Li Xie, Lei Xie:
Elucidation of genome-wide understudied proteins targeted by PROTAC-induced degradation using interpretable machine learning. PLoS Comput. Biol. 19(8) (2023) - 2014
- [j6]Lei Xie, Xiaoxia Ge, Hepan Tan, Li Xie, Yinliang Zhang, Thomas Hart, Xiaowei Yang, Philip E. Bourne:
Towards Structural Systems Pharmacology to Study Complex Diseases and Personalized Medicine. PLoS Comput. Biol. 10(5) (2014) - 2011
- [j5]Li Xie, Thomas Evangelidis, Lei Xie, Philip E. Bourne:
Drug Discovery Using Chemical Systems Biology: Weak Inhibition of Multiple Kinases May Contribute to the Anti-Cancer Effect of Nelfinavir. PLoS Comput. Biol. 7(4) (2011) - 2010
- [j4]Roger L. Chang, Li Xie, Lei Xie, Philip E. Bourne, Bernhard Ø. Palsson:
Drug Off-Target Effects Predicted Using Structural Analysis in the Context of a Metabolic Network Model. PLoS Comput. Biol. 6(9) (2010) - [j3]Sarah L. Kinnings, Li Xie, Kingston H. Fung, Richard M. Jackson, Lei Xie, Philip E. Bourne:
The Mycobacterium tuberculosis Drugome and Its Polypharmacological Implications. PLoS Comput. Biol. 6(11) (2010) - 2009
- [j2]Lei Xie, Li Xie, Philip E. Bourne:
A unified statistical model to support local sequence order independent similarity searching for ligand-binding sites and its application to genome-based drug discovery. Bioinform. 25(12) (2009) - [j1]Li Xie, Jerry Li, Lei Xie, Philip E. Bourne:
Drug Discovery Using Chemical Systems Biology: Identification of the Protein-Ligand Binding Network To Explain the Side Effects of CETP Inhibitors. PLoS Comput. Biol. 5(5) (2009)
Conference and Workshop Papers
- 2012
- [c1]Thomas Evangelidis, Philip E. Bourne, Li Xie, Lei Xie:
An integrated workflow for proteome-wide off-target identification and polypharmacology drug design. BIBM Workshops 2012: 32-39
Informal and Other Publications
- 2023
- [i2]Shuo Zhang, Yang Liu, Li Xie, Lei Xie:
Learning Universal and Robust 3D Molecular Representations with Graph Convolutional Networks. CoRR abs/2307.12491 (2023) - 2021
- [i1]Tian Cai, Li Xie, Muge Chen, Yang Liu, Di He, Shuo Zhang, Cameron Mura, Philip E. Bourne, Lei Xie:
Exploration of Dark Chemical Genomics Space via Portal Learning: Applied to Targeting the Undruggable Genome and COVID-19 Anti-Infective Polypharmacology. CoRR abs/2111.14283 (2021)
Coauthor Index
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