BibTeX records: Sophie Schbath

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@article{DBLP:journals/bioinformatics/BenoitMRSPL20,
  author    = {Ga{\"{e}}tan Benoit and
               Mahendra Mariadassou and
               St{\'{e}}phane Robin and
               Sophie Schbath and
               Pierre Peterlongo and
               Claire Lemaitre},
  title     = {SimkaMin: fast and resource frugal de novo comparative metagenomics},
  journal   = {Bioinform.},
  volume    = {36},
  number    = {4},
  pages     = {1275--1276},
  year      = {2020},
  url       = {https://doi.org/10.1093/bioinformatics/btz685},
  doi       = {10.1093/bioinformatics/btz685},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/bioinformatics/BenoitMRSPL20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HurelSBRPT20,
  author    = {Julie Hurel and
               Sophie Schbath and
               St{\'{e}}phanie Bougeard and
               Mathieu Rolland and
               Mauro Petrillo and
               Fabrice Touzain},
  title     = {{DUGMO:} tool for the detection of unknown genetically modified organisms
               with high-throughput sequencing data for pure bacterial samples},
  journal   = {{BMC} Bioinform.},
  volume    = {21},
  number    = {1},
  pages     = {284},
  year      = {2020},
  url       = {https://doi.org/10.1186/s12859-020-03611-5},
  doi       = {10.1186/s12859-020-03611-5},
  timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/bmcbi/HurelSBRPT20.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/peerj-cs/BenoitPMDSLL16,
  author    = {Ga{\"{e}}tan Benoit and
               Pierre Peterlongo and
               Mahendra Mariadassou and
               Erwan Drezen and
               Sophie Schbath and
               Dominique Lavenier and
               Claire Lemaitre},
  title     = {Multiple comparative metagenomics using multiset \emph{k}-mer counting},
  journal   = {PeerJ Comput. Sci.},
  volume    = {2},
  pages     = {e94},
  year      = {2016},
  url       = {https://doi.org/10.7717/peerj-cs.94},
  doi       = {10.7717/peerj-cs.94},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/peerj-cs/BenoitPMDSLL16.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/DevillersS12,
  author    = {Hugo Devillers and
               Sophie Schbath},
  title     = {Separating Significant Matches from Spurious Matches in {DNA} Sequences},
  journal   = {J. Comput. Biol.},
  volume    = {19},
  number    = {1},
  pages     = {1--12},
  year      = {2012},
  url       = {https://doi.org/10.1089/cmb.2011.0070},
  doi       = {10.1089/cmb.2011.0070},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jcb/DevillersS12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/MovagharLSGR12,
  author    = {Afshin Fayyaz Movaghar and
               Guillaume Launay and
               Sophie Schbath and
               Jean{-}Fran{\c{c}}ois Gibrat and
               Fran{\c{c}}ois Rodolphe},
  title     = {Statistical Significance of Threading Scores},
  journal   = {J. Comput. Biol.},
  volume    = {19},
  number    = {1},
  pages     = {13--29},
  year      = {2012},
  url       = {https://doi.org/10.1089/cmb.2011.0236},
  doi       = {10.1089/cmb.2011.0236},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jcb/MovagharLSGR12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/SchbathMZFLG12,
  author    = {Sophie Schbath and
               V{\'{e}}ronique Martin and
               Matthias Zytnicki and
               Julien Fayolle and
               Valentin Loux and
               Jean{-}Fran{\c{c}}ois Gibrat},
  title     = {Mapping Reads on a Genomic Sequence: An Algorithmic Overview and a
               Practical Comparative Analysis},
  journal   = {J. Comput. Biol.},
  volume    = {19},
  number    = {6},
  pages     = {796--813},
  year      = {2012},
  url       = {https://doi.org/10.1089/cmb.2012.0022},
  doi       = {10.1089/cmb.2012.0022},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jcb/SchbathMZFLG12.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/StefanovRS11,
  author    = {Valery T. Stefanov and
               St{\'{e}}phane Robin and
               Sophie Schbath},
  title     = {Occurrence of structured motifs in random sequences: Arbitrary number
               of boxes},
  journal   = {Discret. Appl. Math.},
  volume    = {159},
  number    = {8},
  pages     = {826--831},
  year      = {2011},
  url       = {https://doi.org/10.1016/j.dam.2010.12.023},
  doi       = {10.1016/j.dam.2010.12.023},
  timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/dam/StefanovRS11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/DevillersCSK11,
  author    = {Hugo Devillers and
               H{\'{e}}l{\`{e}}ne Chiapello and
               Sophie Schbath and
               Meriem El Karoui},
  title     = {Robustness Assessment of Whole Bacterial Genome Segmentations},
  journal   = {J. Comput. Biol.},
  volume    = {18},
  number    = {9},
  pages     = {1155--1165},
  year      = {2011},
  url       = {https://doi.org/10.1089/cmb.2011.0115},
  doi       = {10.1089/cmb.2011.0115},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jcb/DevillersCSK11.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/DevillersCSK10,
  author    = {Hugo Devillers and
               H{\'{e}}l{\`{e}}ne Chiapello and
               Sophie Schbath and
               Meriem El Karoui},
  editor    = {Eric Tannier},
  title     = {Assessing the Robustness of Complete Bacterial Genome Segmentations},
  booktitle = {Comparative Genomics - International Workshop, {RECOMB-CG} 2010, Ottawa,
               Canada, October 9-11, 2010. Proceedings},
  series    = {Lecture Notes in Computer Science},
  volume    = {6398},
  pages     = {173--187},
  publisher = {Springer},
  year      = {2010},
  url       = {https://doi.org/10.1007/978-3-642-16181-0\_15},
  doi       = {10.1007/978-3-642-16181-0\_15},
  timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
  biburl    = {https://dblp.org/rec/conf/recomb/DevillersCSK10.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ejbsb/SchbathLS09,
  author    = {Sophie Schbath and
               Vincent Lacroix and
               Marie{-}France Sagot},
  title     = {Assessing the Exceptionality of Coloured Motifs in Networks},
  journal   = {{EURASIP} J. Bioinform. Syst. Biol.},
  volume    = {2009},
  year      = {2009},
  url       = {https://doi.org/10.1155/2009/616234},
  doi       = {10.1155/2009/616234},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/ejbsb/SchbathLS09.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/TouzainSDAKL08,
  author    = {Fabrice Touzain and
               Sophie Schbath and
               Isabelle Debled{-}Rennesson and
               Bertrand Aigle and
               Gregory Kucherov and
               Pierre Leblond},
  title     = {SIGffRid: {A} tool to search for sigma factor binding sites in bacterial
               genomes using comparative approach and biologically driven statistics},
  journal   = {{BMC} Bioinform.},
  volume    = {9},
  year      = {2008},
  url       = {https://doi.org/10.1186/1471-2105-9-73},
  doi       = {10.1186/1471-2105-9-73},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/bmcbi/TouzainSDAKL08.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/PicardDKSR08,
  author    = {Franck Picard and
               Jean{-}Jacques Daudin and
               Michel Koskas and
               Sophie Schbath and
               St{\'{e}}phane Robin},
  title     = {Assessing the Exceptionality of Network Motifs},
  journal   = {J. Comput. Biol.},
  volume    = {15},
  number    = {1},
  pages     = {1--20},
  year      = {2008},
  url       = {https://doi.org/10.1089/cmb.2007.0137},
  doi       = {10.1089/cmb.2007.0137},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jcb/PicardDKSR08.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/RobinSV07,
  author    = {St{\'{e}}phane Robin and
               Sophie Schbath and
               Vincent Vandewalle},
  title     = {Statistical tests to compare motif count exceptionalities},
  journal   = {{BMC} Bioinform.},
  volume    = {8},
  year      = {2007},
  url       = {https://doi.org/10.1186/1471-2105-8-84},
  doi       = {10.1186/1471-2105-8-84},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/bmcbi/RobinSV07.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/dam/StefanovRS07,
  author    = {Valery T. Stefanov and
               St{\'{e}}phane Robin and
               Sophie Schbath},
  title     = {Waiting times for clumps of patterns and for structured motifs in
               random sequences},
  journal   = {Discret. Appl. Math.},
  volume    = {155},
  number    = {6-7},
  pages     = {868--880},
  year      = {2007},
  url       = {https://doi.org/10.1016/j.dam.2005.07.016},
  doi       = {10.1016/j.dam.2005.07.016},
  timestamp = {Thu, 11 Feb 2021 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/dam/StefanovRS07.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/RobinS02,
  author    = {St{\'{e}}phane Robin and
               Sophie Schbath},
  title     = {Numerical Comparison of Several Approximations of the Word Count Distribution
               in Random Sequences},
  journal   = {J. Comput. Biol.},
  volume    = {8},
  number    = {4},
  pages     = {349--359},
  year      = {2002},
  url       = {https://doi.org/10.1089/106652701752236179},
  doi       = {10.1089/106652701752236179},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jcb/RobinS02.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/RobinDRSS02,
  author    = {St{\'{e}}phane Robin and
               Jean{-}Jacques Daudin and
               Hugues Richard and
               Marie{-}France Sagot and
               Sophie Schbath},
  title     = {Occurrence Probability of Structured Motifs in Random Sequences},
  journal   = {J. Comput. Biol.},
  volume    = {9},
  number    = {6},
  pages     = {761--773},
  year      = {2002},
  url       = {https://doi.org/10.1089/10665270260518254},
  doi       = {10.1089/10665270260518254},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jcb/RobinDRSS02.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ReinertSW00,
  author    = {Gesine Reinert and
               Sophie Schbath and
               Michael S. Waterman},
  title     = {Probabilistic and Statistical Properties of Words: An Overview},
  journal   = {J. Comput. Biol.},
  volume    = {7},
  number    = {1-2},
  pages     = {1--46},
  year      = {2000},
  url       = {https://doi.org/10.1089/10665270050081360},
  doi       = {10.1089/10665270050081360},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jcb/ReinertSW00.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/SchbathBT00,
  author    = {Sophie Schbath and
               Nathalie Bossard and
               Simon Tavar{\'{e}}},
  title     = {The Effect of Nonhomogeneous Clone Length Distribution on the Progress
               of an {STS} Mapping Project},
  journal   = {J. Comput. Biol.},
  volume    = {7},
  number    = {1-2},
  pages     = {47--57},
  year      = {2000},
  url       = {https://doi.org/10.1089/10665270050081379},
  doi       = {10.1089/10665270050081379},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jcb/SchbathBT00.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Schbath00,
  author    = {Sophie Schbath},
  title     = {An Overview on the Distribution of Word Counts in Markov Chains},
  journal   = {J. Comput. Biol.},
  volume    = {7},
  number    = {1-2},
  pages     = {193--201},
  year      = {2000},
  url       = {https://doi.org/10.1089/10665270050081469},
  doi       = {10.1089/10665270050081469},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jcb/Schbath00.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/ReinertS98,
  author    = {Gesine Reinert and
               Sophie Schbath},
  title     = {Compound Poisson and Poisson Process Approximations for Occurrences
               of Multiple Words in Markov Chains},
  journal   = {J. Comput. Biol.},
  volume    = {5},
  number    = {2},
  pages     = {223--253},
  year      = {1998},
  url       = {https://doi.org/10.1089/cmb.1998.5.223},
  doi       = {10.1089/cmb.1998.5.223},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jcb/ReinertS98.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Schbath97,
  author    = {Sophie Schbath},
  title     = {Coverage Processes in Physical Mapping by Anchoring Random Clones},
  journal   = {J. Comput. Biol.},
  volume    = {4},
  number    = {1},
  pages     = {61--82},
  year      = {1997},
  url       = {https://doi.org/10.1089/cmb.1997.4.61},
  doi       = {10.1089/cmb.1997.4.61},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jcb/Schbath97.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Schbath97a,
  author    = {Sophie Schbath},
  title     = {An Efficient Statistic to Detect Over-and Under-Represented Words
               in {DNA} Sequences},
  journal   = {J. Comput. Biol.},
  volume    = {4},
  number    = {2},
  pages     = {189--192},
  year      = {1997},
  url       = {https://doi.org/10.1089/cmb.1997.4.189},
  doi       = {10.1089/cmb.1997.4.189},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jcb/Schbath97a.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/SchbathPT95,
  author    = {Sophie Schbath and
               Bernard Prum and
               Elisabeth de Turckheim},
  title     = {Exceptional Motifs in Different Markov Chain Models for a Statistical
               Analysis of {DNA} Sequences},
  journal   = {J. Comput. Biol.},
  volume    = {2},
  number    = {3},
  pages     = {417--437},
  year      = {1995},
  url       = {https://doi.org/10.1089/cmb.1995.2.417},
  doi       = {10.1089/cmb.1995.2.417},
  timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl    = {https://dblp.org/rec/journals/jcb/SchbathPT95.bib},
  bibsource = {dblp computer science bibliography, https://dblp.org}
}
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