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Mark C. Coles
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2020 – today
- 2022
- [j7]Joanneke E. Jansen
, Dominik Aschenbrenner
, Holm H. Uhlig, Mark C. Coles
, Eamonn A. Gaffney
:
A method for the inference of cytokine interaction networks. PLoS Comput. Biol. 18(6) (2022) - 2020
- [j6]Kieran Alden
, Jason Cosgrove
, Mark C. Coles
, Jon Timmis
:
Using Emulation to Engineer and Understand Simulations of Biological Systems. IEEE ACM Trans. Comput. Biol. Bioinform. 17(1): 302-315 (2020)
2010 – 2019
- 2017
- [j5]Stephanie Evans
, Kieran Alden
, Lourdes Cucurull-Sanchez, Christopher Larminie, Mark C. Coles, Marika C. Kullberg, Jon Timmis
:
ASPASIA: A toolkit for evaluating the effects of biological interventions on SBML model behaviour. PLoS Comput. Biol. 13(2) (2017) - [j4]Kieran Alden
, Jon Timmis
, Paul S. Andrews, Henrique Veiga-Fernandes
, Mark C. Coles:
Extending and Applying Spartan to Perform Temporal Sensitivity Analyses for Predicting Changes in Influential Biological Pathways in Computational Models. IEEE ACM Trans. Comput. Biol. Bioinform. 14(2): 431-442 (2017) - 2015
- [j3]Kieran Alden
, Paul S. Andrews, Henrique Veiga-Fernandes
, Jon Timmis
, Mark C. Coles:
Utilising a simulation platform to understand the effect of domain model assumptions. Nat. Comput. 14(1): 99-107 (2015) - 2014
- [j2]Kieran Alden, Mark Read
, Paul S. Andrews, Jon Timmis, Mark C. Coles:
Applying spartan to Understand Parameter Uncertainty in Simulations. R J. 6(2): 63 (2014) - [c3]James A. Butler, Kieran Alden
, Henrique Veiga-Fernandes, Jon Timmis, Mark C. Coles:
Novel Approaches to the Visualization and Quantification of Biological Simulations by Emulating Experimental Techniques. ALIFE 2014: 614-621 - [c2]Kieran Alden
, Jon Timmis, Mark C. Coles:
Easing Parameter Sensitivity Analysis of Netlogo Simulations Using SPARTAN. ALIFE 2014: 622-628 - 2013
- [j1]Kieran Alden
, Mark Read
, Jonathan Timmis
, Paul S. Andrews, Henrique Veiga-Fernandes
, Mark C. Coles:
Spartan: A Comprehensive Tool for Understanding Uncertainty in Simulations of Biological Systems. PLoS Comput. Biol. 9(2) (2013) - 2011
- [c1]Kieran Alden
, Paul S. Andrews, Jon Timmis
, Henrique Veiga-Fernandes
, Mark C. Coles:
Towards Argument-Driven Validation of an in silico Model of Immune Tissue Organogenesis. ICARIS 2011: 66-70
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