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2020 – today
- 2023
- [i18]Mahdi Gilany, Paul Wilson, Andrea Perera-Ortega, Amoon Jamzad, Minh Nguyen Nhat To, Fahimeh Fooladgar, Brian Wodlinger, Purang Abolmaesumi, Parvin Mousavi:
TRUSformer: Improving Prostate Cancer Detection from Micro-Ultrasound Using Attention and Self-Supervision. CoRR abs/2303.02128 (2023) - 2022
- [j91]Golara Javadi
, Sharareh Bayat, Mohammad Mahdi Kazemi Esfeh, Samareh Samadi, Alireza Sedghi, Samira Sojoudi, Antonio Hurtado, Silvia D. Chang, Peter C. Black, Parvin Mousavi, Purang Abolmaesumi:
Towards targeted ultrasound-guided prostate biopsy by incorporating model and label uncertainty in cancer detection. Int. J. Comput. Assist. Radiol. Surg. 17(1): 121-128 (2022) - [j90]Minh Nguyen Nhat To
, Fahimeh Fooladgar, Golara Javadi, Sharareh Bayat, Samira Sojoudi, Antonio Hurtado, Silvia D. Chang, Peter C. Black, Parvin Mousavi, Purang Abolmaesumi:
Coarse label refinement for improving prostate cancer detection in ultrasound imaging. Int. J. Comput. Assist. Radiol. Surg. 17(5): 841-847 (2022) - [j89]Golara Javadi
, Samareh Samadi, Sharareh Bayat, Samira Sojoudi, Antonio Hurtado, Walid Eshumani, Silvia D. Chang, Peter C. Black, Parvin Mousavi, Purang Abolmaesumi:
Training deep neural networks with noisy clinical labels: toward accurate detection of prostate cancer in US data. Int. J. Comput. Assist. Radiol. Surg. 17(9): 1697-1705 (2022) - [j88]Fahimeh Fooladgar, Amoon Jamzad, Laura Connolly, Alice M. L. Santilli, Martin Kaufmann, Kevin Yi Mi Ren, Purang Abolmaesumi, John F. Rudan, Doug McKay, Gabor Fichtinger, Parvin Mousavi:
Uncertainty estimation for margin detection in cancer surgery using mass spectrometry. Int. J. Comput. Assist. Radiol. Surg. 17(12): 2305-2313 (2022) - [j87]Mohammad H. Jafari
, Christina Luong
, Michael Tsang, Ang Nan Gu
, Nathan Van Woudenberg, Robert Rohling
, Teresa Tsang
, Purang Abolmaesumi
:
U-LanD: Uncertainty-Driven Video Landmark Detection. IEEE Trans. Medical Imaging 41(4): 793-804 (2022) - [c161]Fahimeh Fooladgar, Minh Nguyen Nhat To, Golara Javadi, Samareh Samadi, Sharareh Bayat, Samira Sojoudi, Walid Eshumani, Antonio Hurtado, Silvia D. Chang, Peter C. Black, Parvin Mousavi, Purang Abolmaesumi:
Uncertainty-Aware Deep Ensemble Model For Targeted Ultrasound-Guided Prostate Biopsy. ISBI 2022: 1-5 - [c160]Mobina Mahdavi, Hooman Vaseli, Christina Luong, Nathan Van Woudenberg, Mohammad H. Jafari, Purang Abolmaesumi, Teresa Tsang:
Differential Learning from Sparse and Noisy Labels for Robust Detection of Clinical Landmarks in Echo Cine Series. ASMUS@MICCAI 2022: 44-53 - [c159]Sana Ayromlou, Purang Abolmaesumi, Teresa Tsang, Xiaoxiao Li:
Class Impression for Data-Free Incremental Learning. MICCAI (4) 2022: 320-329 - [c158]Masoud Mokhtari
, Teresa Tsang, Purang Abolmaesumi, Renjie Liao:
EchoGNN: Explainable Ejection Fraction Estimation with Graph Neural Networks. MICCAI (4) 2022: 360-369 - [c157]Mahdi Gilany, Paul F. R. Wilson, Amoon Jamzad, Fahimeh Fooladgar, Minh Nguyen Nhat To, Brian Wodlinger, Purang Abolmaesumi, Parvin Mousavi:
Towards Confident Detection of Prostate Cancer Using High Resolution Micro-ultrasound. MICCAI (4) 2022: 411-420 - [c156]Mohammad Mahdi Kazemi Esfeh, Zahra Gholami, Christina Luong, Teresa Tsang, Purang Abolmaesumi:
DEUE: Delta Ensemble Uncertainty Estimation for a More Robust Estimation of Ejection Fraction. MICCAI (8) 2022: 525-534 - [i17]Sana Ayromlou, Purang Abolmaesumi, Teresa Tsang, Xiaoxiao Li:
Class Impression for Data-free Incremental Learning. CoRR abs/2207.00005 (2022) - [i16]Mahdi Gilany, Paul F. R. Wilson, Amoon Jamzad, Fahimeh Fooladgar, Minh Nguyen Nhat To, Brian Wodlinger, Purang Abolmaesumi, Parvin Mousavi:
Towards Confident Detection of Prostate Cancer using High Resolution Micro-ultrasound. CoRR abs/2207.10485 (2022) - [i15]Masoud Mokhtari, Teresa Tsang, Purang Abolmaesumi, Renjie Liao:
EchoGNN: Explainable Ejection Fraction Estimation with Graph Neural Networks. CoRR abs/2208.14003 (2022) - [i14]Paul F. R. Wilson, Mahdi Gilany, Amoon Jamzad, Fahimeh Fooladgar, Minh Nguyen Nhat To, Brian Wodlinger, Purang Abolmaesumi, Parvin Mousavi:
Self-Supervised Learning with Limited Labeled Data for Prostate Cancer Detection in High Frequency Ultrasound. CoRR abs/2211.00527 (2022) - 2021
- [j86]Anne L. Martel
, Danail Stoyanov, Diana Mateus, Leo Joskowicz, Purang Abolmaesumi:
IJCARS: MICCAI 2020 special issue. Int. J. Comput. Assist. Radiol. Surg. 16(10): 1639 (2021) - [j85]Gabor Fichtinger
, Parvin Mousavi, Tamas Ungi
, Aaron Fenster
, Purang Abolmaesumi, Gernot Kronreif, Juan Ruiz-Alzola
, Alain Ndoye, Babacar Diao, Ron Kikinis
:
Design of an Ultrasound-Navigated Prostate Cancer Biopsy System for Nationwide Implementation in Senegal. J. Imaging 7(8): 154 (2021) - [j84]Fatemeh Taheri Dezaki
, Christina Luong, Tom Ginsberg, Robert Rohling
, Ken Gin
, Purang Abolmaesumi
, Teresa Tsang
:
Echo-SyncNet: Self-Supervised Cardiac View Synchronization in Echocardiography. IEEE Trans. Medical Imaging 40(8): 2092-2104 (2021) - [c155]Jianzhe Lin, Ghazal Sahebzamani, Christina Luong, Fatemeh Taheri Dezaki, Mohammad H. Jafari, Purang Abolmaesumi, Teresa Tsang:
Reciprocal Landmark Detection and Tracking With Extremely Few Annotations. CVPR 2021: 15170-15179 - [c154]Ang Nan Gu, Mohammad H. Jafari, Christina Luong, Teresa Tsang, Purang Abolmaesumi:
Echocardiogram View Conversion using Clinically Constrained Conditional GAN. ISBI 2021: 96-99 - [c153]Fatemeh Taheri Dezaki, Tom Ginsberg, Christina Luong, Hooman Vaseli, Robert Rohling, Ken Gin, Purang Abolmaesumi, Teresa Tsang:
Echo-Rhythm Net: Semi-Supervised Learning For Automatic Detection of Atrial Fibrillation in Echocardiography. ISBI 2021: 110-113 - [c152]Golara Javadi, Samareh Samadi, Sharareh Bayat, Samira Sojoudi, Antonio Hurtado, Silvia D. Chang, Peter C. Black, Parvin Mousavi, Purang Abolmaesumi:
Characterizing The Uncertainty Of Label Noise In Systematic Ultrasound-Guided Prostate Biopsy. ISBI 2021: 424-428 - [c151]Alireza Mehrtash, Tina Kapur, Clare M. Tempany, Purang Abolmaesumi, William M. Wells III:
Prostate Cancer Diagnosis With Sparse Biopsy Data And In Presence Of Location Uncertainty. ISBI 2021: 443-447 - [c150]Mohammad H. Jafari, Nathan Van Woudenberg, Christina Luong, Purang Abolmaesumi, Teresa Tsang:
Deep Bayesian Image Segmentation For A More Robust Ejection Fraction Estimation. ISBI 2021: 1264-1268 - [c149]Ang Nan Gu, Christina Luong, Mohammad H. Jafari, Nathan Van Woudenberg, Hany Girgis, Purang Abolmaesumi, Teresa Tsang:
Efficient Echocardiogram View Classification with Sampling-Free Uncertainty Estimation. ASMUS@MICCAI 2021: 139-148 - [c148]Tyler Lum, Mobina Mahdavi, Oron Frenkel, Christopher Lee, Mohammad H. Jafari, Fatemeh Taheri Dezaki, Nathan Van Woudenberg, Ang Nan Gu, Purang Abolmaesumi, Teresa Tsang:
Imaging Biomarker Knowledge Transfer for Attention-Based Diagnosis of COVID-19 in Lung Ultrasound Videos. ASMUS@MICCAI 2021: 159-168 - [c147]Tom Ginsberg, Ro-ee Tal, Michael Tsang, Calum Macdonald, Fatemeh Taheri Dezaki, John van der Kuur, Christina Luong, Purang Abolmaesumi, Teresa Tsang:
Deep Video Networks for Automatic Assessment of Aortic Stenosis in Echocardiography. ASMUS@MICCAI 2021: 202-210 - [c146]Golara Javadi, Samareh Samadi, Sharareh Bayat, Samira Sojoudi, Antonio Hurtado, Silvia D. Chang, Peter C. Black, Parvin Mousavi, Purang Abolmaesumi:
Training Deep Networks for Prostate Cancer Diagnosis Using Coarse Histopathological Labels. MICCAI (8) 2021: 680-689 - [c145]Brian Chen, Golara Javadi, Amoon Jamzad, Alexander Hamilton, Stephanie Sibley, Purang Abolmaesumi, David Maslove, Parvin Mousavi:
Detecting Atrial Fibrillation in ICU Telemetry data with Weak Labels. MLHC 2021: 176-195 - [i13]Jianzhe Lin, Ghazal Sahebzamani, Christina Luong, Fatemeh Taheri Dezaki, Mohammad H. Jafari, Purang Abolmaesumi, Teresa Tsang:
Reciprocal Landmark Detection and Tracking with Extremely Few Annotations. CoRR abs/2101.11224 (2021) - [i12]Mohammad H. Jafari, Christina Luong, Michael Tsang, Ang Nan Gu, Nathan Van Woudenberg, Robert Rohling, Teresa Tsang, Purang Abolmaesumi:
U-LanD: Uncertainty-Driven Video Landmark Detection. CoRR abs/2102.01586 (2021) - [i11]Fatemeh Taheri Dezaki, Christina Luong, Tom Ginsberg, Robert Rohling, Ken Gin, Purang Abolmaesumi, Teresa Tsang:
Echo-SyncNet: Self-supervised Cardiac View Synchronization in Echocardiography. CoRR abs/2102.02287 (2021) - 2020
- [j83]Mohammad H. Jafari, Hany Girgis, Nathan Van Woudenberg, Nathaniel Moulson, Christina Luong, Andrea Fung, Shane Balthazaar
, John Jue, Michael Tsang, Parvathy Nair, Ken Gin, Robert Rohling, Purang Abolmaesumi, Teresa Tsang:
Cardiac point-of-care to cart-based ultrasound translation using constrained CycleGAN. Int. J. Comput. Assist. Radiol. Surg. 15(5): 877-886 (2020) - [j82]Golara Javadi, Samareh Samadi, Sharareh Bayat, Mehran Pesteie, Mohammad H. Jafari, Samira Sojoudi, Claudia Kesch, Antonio Hurtado, Silvia D. Chang, Parvin Mousavi, Peter C. Black, Purang Abolmaesumi:
Multiple instance learning combined with label invariant synthetic data for guiding systematic prostate biopsy: a feasibility study. Int. J. Comput. Assist. Radiol. Surg. 15(6): 1023-1031 (2020) - [j81]Alireza Sedghi, Alireza Mehrtash, Amoon Jamzad, Amel Amalou, William M. Wells III, Tina Kapur, Jin Tae Kwak
, Baris Turkbey, Peter L. Choyke, Peter A. Pinto, Bradford J. Wood
, Sheng Xu, Purang Abolmaesumi, Parvin Mousavi:
Improving detection of prostate cancer foci via information fusion of MRI and temporal enhanced ultrasound. Int. J. Comput. Assist. Radiol. Surg. 15(7): 1215-1223 (2020) - [j80]Delaram Behnami, Christina Luong, Hooman Vaseli, Hany Girgis, Amir H. Abdi, Dale Hawley, Ken Gin, Robert Rohling, Purang Abolmaesumi, Teresa Tsang:
Automatic cine-based detection of patients at high risk of heart failure with reduced ejection fraction in echocardiograms. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 8(5): 502-508 (2020) - [j79]Zhibin Liao
, Hany Girgis, Amir H. Abdi
, Hooman Vaseli
, Jorden Hetherington
, Robert Rohling, Ken Gin
, Teresa Tsang, Purang Abolmaesumi
:
On Modelling Label Uncertainty in Deep Neural Networks: Automatic Estimation of Intra- Observer Variability in 2D Echocardiography Quality Assessment. IEEE Trans. Medical Imaging 39(6): 1868-1883 (2020) - [j78]Alireza Mehrtash
, William M. Wells III, Clare M. Tempany, Purang Abolmaesumi
, Tina Kapur
:
Confidence Calibration and Predictive Uncertainty Estimation for Deep Medical Image Segmentation. IEEE Trans. Medical Imaging 39(12): 3868-3878 (2020) - [c144]Justin Gerolami, Amoon Jamzad, Sijia Li, Sharareh Bayat, Purang Abolmaesumi, Parvin Mousavi:
Soft Tissue Characterization with Temporal Enhanced Ultrasound through Periodic Manipulation of Point Spread Function: A Feasibility Study. EMBC 2020: 78-81 - [c143]Justin Gerolami, Victoria Wu, Paolo Nasute Fauerbach, Doris Jabs, Cecil Jay Engel, John F. Rudan, Shaila Merchant, Ross Walker, Emran Mohammad Abu Anas, Purang Abolmaesumi, Gabor Fichtinger, Tamas Ungi, Parvin Mousavi:
An End-to-End Solution for Automatic Contouring of Tumor Region in Intraoperative Images of Breast Lumpectomy. EMBC 2020: 2003-2006 - [c142]Golara Javadi, Minh Nguyen Nhat To
, Samareh Samadi, Sharareh Bayat, Samira Sojoudi, Antonio Hurtado, Silvia D. Chang, Peter C. Black, Parvin Mousavi, Purang Abolmaesumi:
Complex Cancer Detector: Complex Neural Networks on Non-stationary Time Series for Guiding Systematic Prostate Biopsy. MICCAI (3) 2020: 524-533 - [c141]Mohammad Mahdi Kazemi Esfeh, Christina Luong, Delaram Behnami, Teresa Tsang, Purang Abolmaesumi:
A Deep Bayesian Video Analysis Framework: Towards a More Robust Estimation of Ejection Fraction. MICCAI (2) 2020: 582-590 - [c140]Alireza Mehrtash, Purang Abolmaesumi, Polina Golland, Tina Kapur, Demian Wassermann, William M. Wells III:
PEP: Parameter Ensembling by Perturbation. NeurIPS 2020 - [e11]Anne L. Martel
, Purang Abolmaesumi
, Danail Stoyanov
, Diana Mateus
, Maria A. Zuluaga
, S. Kevin Zhou
, Daniel Racoceanu
, Leo Joskowicz
:
Medical Image Computing and Computer Assisted Intervention - MICCAI 2020 - 23rd International Conference, Lima, Peru, October 4-8, 2020, Proceedings, Part I. Lecture Notes in Computer Science 12261, Springer 2020, ISBN 978-3-030-59709-2 [contents] - [e10]Anne L. Martel
, Purang Abolmaesumi
, Danail Stoyanov
, Diana Mateus
, Maria A. Zuluaga
, S. Kevin Zhou
, Daniel Racoceanu
, Leo Joskowicz
:
Medical Image Computing and Computer Assisted Intervention - MICCAI 2020 - 23rd International Conference, Lima, Peru, October 4-8, 2020, Proceedings, Part II. Lecture Notes in Computer Science 12262, Springer 2020, ISBN 978-3-030-59712-2 [contents] - [e9]Anne L. Martel
, Purang Abolmaesumi
, Danail Stoyanov
, Diana Mateus
, Maria A. Zuluaga
, S. Kevin Zhou
, Daniel Racoceanu
, Leo Joskowicz
:
Medical Image Computing and Computer Assisted Intervention - MICCAI 2020 - 23rd International Conference, Lima, Peru, October 4-8, 2020, Proceedings, Part III. Lecture Notes in Computer Science 12263, Springer 2020, ISBN 978-3-030-59715-3 [contents] - [e8]Anne L. Martel
, Purang Abolmaesumi
, Danail Stoyanov
, Diana Mateus
, Maria A. Zuluaga
, S. Kevin Zhou
, Daniel Racoceanu
, Leo Joskowicz
:
Medical Image Computing and Computer Assisted Intervention - MICCAI 2020 - 23rd International Conference, Lima, Peru, October 4-8, 2020, Proceedings, Part IV. Lecture Notes in Computer Science 12264, Springer 2020, ISBN 978-3-030-59718-4 [contents] - [e7]Anne L. Martel
, Purang Abolmaesumi
, Danail Stoyanov
, Diana Mateus
, Maria A. Zuluaga
, S. Kevin Zhou
, Daniel Racoceanu
, Leo Joskowicz
:
Medical Image Computing and Computer Assisted Intervention - MICCAI 2020 - 23rd International Conference, Lima, Peru, October 4-8, 2020, Proceedings, Part V. Lecture Notes in Computer Science 12265, Springer 2020, ISBN 978-3-030-59721-4 [contents] - [e6]Anne L. Martel
, Purang Abolmaesumi
, Danail Stoyanov
, Diana Mateus
, Maria A. Zuluaga
, S. Kevin Zhou
, Daniel Racoceanu
, Leo Joskowicz
:
Medical Image Computing and Computer Assisted Intervention - MICCAI 2020 - 23rd International Conference, Lima, Peru, October 4-8, 2020, Proceedings, Part VI. Lecture Notes in Computer Science 12266, Springer 2020, ISBN 978-3-030-59724-5 [contents] - [e5]Anne L. Martel
, Purang Abolmaesumi
, Danail Stoyanov
, Diana Mateus
, Maria A. Zuluaga
, S. Kevin Zhou
, Daniel Racoceanu
, Leo Joskowicz
:
Medical Image Computing and Computer Assisted Intervention - MICCAI 2020 - 23rd International Conference, Lima, Peru, October 4-8, 2020, Proceedings, Part VII. Lecture Notes in Computer Science 12267, Springer 2020, ISBN 978-3-030-59727-6 [contents] - [i10]Alireza Mehrtash, Purang Abolmaesumi, Polina Golland, Tina Kapur, Demian Wassermann, William M. Wells III:
PEP: Parameter Ensembling by Perturbation. CoRR abs/2010.12721 (2020)
2010 – 2019
- 2019
- [j77]Alireza Sedghi
, Mehran Pesteie, Golara Javadi, Shekoofeh Azizi
, Pingkun Yan
, Jin Tae Kwak
, Sheng Xu, Baris Turkbey, Peter L. Choyke, Peter A. Pinto, Bradford J. Wood
, Robert Rohling, Purang Abolmaesumi, Parvin Mousavi:
Deep neural maps for unsupervised visualization of high-grade cancer in prostate biopsies. Int. J. Comput. Assist. Radiol. Surg. 14(6): 1009-1016 (2019) - [j76]Mohammad H. Jafari
, Hany Girgis, Nathan Van Woudenberg, Zhibin Liao, Robert Rohling, Ken Gin, Purang Abolmaesumi, Terasa Tsang:
Automatic biplane left ventricular ejection fraction estimation with mobile point-of-care ultrasound using multi-task learning and adversarial training. Int. J. Comput. Assist. Radiol. Surg. 14(6): 1027-1037 (2019) - [j75]Sabrina Rashid, Guy Nir, Ladan Fazli, Alexander H. Boag, D. Robert Siemens, S. Larry Goldenberg, Purang Abolmaesumi, Septimiu E. Salcudean:
Automatic pathology of prostate cancer in whole mount slides incorporating individual gland classification. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 7(3): 336-347 (2019) - [j74]Davood Karimi
, Qi Zeng, Prateek Mathur, Apeksha Avinash
, Sara Mahdavi, Ingrid Spadinger, Purang Abolmaesumi, Septimiu E. Salcudean:
Accurate and robust deep learning-based segmentation of the prostate clinical target volume in ultrasound images. Medical Image Anal. 57: 186-196 (2019) - [j73]Alireza Mehrtash
, Mohsen Ghafoorian, Guillaume Pernelle, Alireza Ziaei, Friso G. Heslinga
, Kemal Tuncali, Andriy Fedorov
, Ron Kikinis, Clare M. Tempany, William M. Wells III, Purang Abolmaesumi
, Tina Kapur
:
Automatic Needle Segmentation and Localization in MRI With 3-D Convolutional Neural Networks: Application to MRI-Targeted Prostate Biopsy. IEEE Trans. Medical Imaging 38(4): 1026-1036 (2019) - [j72]Fatemeh Taheri Dezaki
, Zhibin Liao
, Christina Luong, Hany Girgis
, Neeraj Dhungel, Amir H. Abdi
, Delaram Behnami, Ken Gin
, Robert Rohling, Purang Abolmaesumi
, Teresa Tsang:
Cardiac Phase Detection in Echocardiograms With Densely Gated Recurrent Neural Networks and Global Extrema Loss. IEEE Trans. Medical Imaging 38(8): 1821-1832 (2019) - [j71]Mehran Pesteie
, Purang Abolmaesumi
, Robert N. Rohling:
Adaptive Augmentation of Medical Data Using Independently Conditional Variational Auto-Encoders. IEEE Trans. Medical Imaging 38(12): 2807-2820 (2019) - [c139]Mohammad H. Jafari, Hany Girgis, Amir H. Abdi, Zhibin Liao, Mehran Pesteie, Robert Rohling, Ken Gin, Terasa Tsang, Purang Abolmaesumi:
Semi-Supervised Learning For Cardiac Left Ventricle Segmentation Using Conditional Deep Generative Models as Prior. ISBI 2019: 649-652 - [c138]Tom van Sonsbeek, Pardiss Danaei, Delaram Behnami, Mohammad Hossein Jafari, Parisa Asgharzadeh, Robert Rohling, Purang Abolmaesumi:
End-To-End Vertebra Localization and Level Detection in Weakly Labelled 3D Spinal Mr using Cascaded Neural Networks. ISBI 2019: 1178-1182 - [c137]Amir H. Abdi, Mehran Pesteie, Eitan Prisman
, Purang Abolmaesumi, Sidney S. Fels:
Variational Shape Completion for Virtual Planning of Jaw Reconstructive Surgery. MICCAI (5) 2019: 227-235 - [c136]Mohammad H. Jafari, Zhibin Liao, Hany Girgis, Mehran Pesteie, Robert Rohling, Ken Gin, Terasa Tsang, Purang Abolmaesumi:
Echocardiography Segmentation by Quality Translation Using Anatomically Constrained CycleGAN. MICCAI (5) 2019: 655-663 - [c135]Zhibin Liao, Mohammad H. Jafari, Hany Girgis, Kenneth Gin, Robert Rohling, Purang Abolmaesumi, Teresa Tsang:
Echocardiography View Classification Using Quality Transfer Star Generative Adversarial Networks. MICCAI (2) 2019: 687-695 - [c134]Delaram Behnami, Zhibin Liao, Hany Girgis, Christina Luong, Robert Rohling, Ken Gin, Teresa Tsang, Purang Abolmaesumi:
Dual-View Joint Estimation of Left Ventricular Ejection Fraction with Uncertainty Modelling in Echocardiograms. MICCAI (2) 2019: 696-704 - [c133]Fatemeh Taheri Dezaki, Hany Girgis, Robert Rohling, Ken Gin, Purang Abolmaesumi, Teresa Tsang:
Frame Rate Up-Conversion in Echocardiography Using a Conditioned Variational Autoencoder and Generative Adversarial Model. MICCAI (2) 2019: 705-713 - [c132]Amir H. Abdi, Heather Borgard, Purang Abolmaesumi, Sidney S. Fels:
AnatomyGen: Deep Anatomy Generation From Dense Representation With Applications in Mandible Synthesis. MIDL 2019: 4-14 - [c131]Simon Honigmann, Yi Cheng Zhu, Rohit Singla, Purang Abolmaesumi, Anthony Chau, Robert Rohling:
EpiGuide 2D: visibility assessment of a novel multi-channel out-of-plane needle guide for 2D point of care ultrasound. Medical Imaging: Image-Guided Procedures 2019: 109510K - [c130]Sijia Li, Jack A. Barnes, Purang Abolmaesumi, Hans-Peter Loock, Parvin Mousavi:
Temporal enhanced ultrasound and shear wave elastography for tissue classification in cancer interventions: an experimental evaluation. Medical Imaging: Image-Guided Procedures 2019: 109510V - [c129]Hooman Vaseli, Zhibin Liao, Amir H. Abdi, Hany Girgis, Delaram Behnami, Christina Luong, Fatemeh Taheri Dezaki, Neeraj Dhungel, Robert Rohling, Ken Gin, Purang Abolmaesumi, Teresa Tsang:
Designing lightweight deep learning models for echocardiography view classification. Medical Imaging: Image-Guided Procedures 2019: 109510F - [i9]Amir H. Abdi, Mehran Pesteie, Eitan Prisman, Purang Abolmaesumi, Sidney S. Fels:
Variational Mandible Shape Completion for Virtual Surgical Planning. CoRR abs/1906.11957 (2019) - [i8]Zhibin Liao, Hany Girgis, Amir H. Abdi, Hooman Vaseli, Jorden Hetherington, Robert Rohling, Ken Gin, Teresa Tsang, Purang Abolmaesumi:
On Modelling Label Uncertainty in Deep Neural Networks: Automatic Estimation of Intra-observer Variability in 2D Echocardiography Quality Assessment. CoRR abs/1911.00674 (2019) - [i7]Amir H. Abdi, Teresa Tsang, Purang Abolmaesumi:
GAN-enhanced Conditional Echocardiogram Generation. CoRR abs/1911.02121 (2019) - [i6]Amir H. Abdi, Purang Abolmaesumi, Sidney S. Fels:
A Preliminary Study of Disentanglement With Insights on the Inadequacy of Metrics. CoRR abs/1911.11791 (2019) - [i5]Alireza Mehrtash, William M. Wells III, Clare M. Tempany, Purang Abolmaesumi, Tina Kapur:
Confidence Calibration and Predictive Uncertainty Estimation for Deep Medical Image Segmentation. CoRR abs/1911.13273 (2019) - [i4]Amir H. Abdi, Mohammad H. Jafari, Sidney S. Fels, Teresa Tsang, Purang Abolmaesumi:
A Study into Echocardiography View Conversion. CoRR abs/1912.03120 (2019) - [i3]Amir H. Abdi, Purang Abolmaesumi, Sidney S. Fels:
Variational Learning with Disentanglement-PyTorch. CoRR abs/1912.05184 (2019) - 2018
- [j70]Qi Zeng
, Golnoosh Samei, Davood Karimi, Claudia Kesch
, Seyedeh Sara Mahdavi, Purang Abolmaesumi, Septimiu E. Salcudean
:
Prostate segmentation in transrectal ultrasound using magnetic resonance imaging priors. Int. J. Comput. Assist. Radiol. Surg. 13(6): 749-757 (2018) - [j69]Shekoofeh Azizi
, Nathan Van Woudenberg, Samira Sojoudi, Ming Li, Sheng Xu, Emran Mohammad Abu Anas, Pingkun Yan
, Amir M. Tahmasebi, Jin Tae Kwak
, Baris Turkbey, Peter L. Choyke, Peter A. Pinto, Bradford J. Wood
, Parvin Mousavi
, Purang Abolmaesumi:
Toward a real-time system for temporal enhanced ultrasound-guided prostate biopsy. Int. J. Comput. Assist. Radiol. Surg. 13(8): 1201-1209 (2018) - [j68]Igor Peterlík
, Hadrien Courtecuisse, Robert Rohling, Purang Abolmaesumi, Christopher Y. Nguan, Stéphane Cotin, Septimiu Salcudean
:
Fast elastic registration of soft tissues under large deformations. Medical Image Anal. 45: 24-40 (2018) - [j67]Emran Mohammad Abu Anas, Parvin Mousavi
, Purang Abolmaesumi:
A deep learning approach for real time prostate segmentation in freehand ultrasound guided biopsy. Medical Image Anal. 48: 107-116 (2018) - [j66]Guy Nir
, Soheil Hor, Davood Karimi, Ladan Fazli, Brian F. Skinnider, Peyman Tavassoli, Dmitry Turbin, Carlos F. Villamil, Gang Wang, R. Storey Wilson, Kenneth A. Iczkowski, M. Scott Lucia, Peter C. Black, Purang Abolmaesumi, S. Larry Goldenberg, Septimiu E. Salcudean:
Automatic grading of prostate cancer in digitized histopathology images: Learning from multiple experts. Medical Image Anal. 50: 167-180 (2018) - [j65]Jack A. Barnes, Sijia Li, Apoorv Goyal, Purang Abolmaesumi, Parvin Mousavi
, Hans-Peter Loock
:
Broadband Vibration Detection in Tissue Phantoms Using a Fiber Fabry-Perot Cavity. IEEE Trans. Biomed. Eng. 65(4): 921-927 (2018) - [j64]Layan Nahlawi
, Caroline Goncalves
, Farhad Imani, Mena Gaed, Jose A. Gomez, Madeleine Moussa, Eli Gibson
, Aaron Fenster
, Aaron D. Ward, Purang Abolmaesumi
, Hagit Shatkay, Parvin Mousavi
:
Stochastic Modeling of Temporal Enhanced Ultrasound: Impact of Temporal Properties on Prostate Cancer Characterization. IEEE Trans. Biomed. Eng. 65(8): 1798-1809 (2018) - [j63]Mehran Pesteie
, Victoria A. Lessoway, Purang Abolmaesumi
, Robert N. Rohling:
Automatic Localization of the Needle Target for Ultrasound-Guided Epidural Injections. IEEE Trans. Medical Imaging 37(1): 81-92 (2018) - [j62]Shekoofeh Azizi
, Sharareh Bayat
, Pingkun Yan
, Amir Tahmasebi, Jin Tae Kwak
, Sheng Xu, Baris Turkbey, Peter L. Choyke, Peter A. Pinto, Bradford J. Wood
, Parvin Mousavi
, Purang Abolmaesumi
:
Deep Recurrent Neural Networks for Prostate Cancer Detection: Analysis of Temporal Enhanced Ultrasound. IEEE Trans. Medical Imaging 37(12): 2695-2703 (2018) - [c128]Mehran Pesteie, Purang Abolmaesumi, Robert Rohling:
Deep Neural Maps. ICLR (Workshop) 2018 - [c127]Anneke Meyer, Alireza Mehrtash
, Marko Rak, Daniel Schindele, Martin Schostak, Clare M. Tempany, Tina Kapur, Purang Abolmaesumi, Andriy Fedorov
, Christian Hansen:
Automatic high resolution segmentation of the prostate from multi-planar MRI. ISBI 2018: 177-181 - [c126]Shekoofeh Azizi
, Pingkun Yan
, Amir M. Tahmasebi, Peter A. Pinto, Bradford J. Wood
, Jin Tae Kwak, Sheng Xu, Baris Turkbey, Peter L. Choyke, Parvin Mousavi
, Purang Abolmaesumi:
Learning from Noisy Label Statistics: Detecting High Grade Prostate Cancer in Ultrasound Guided Biopsy. MICCAI (4) 2018: 21-29 - [c125]Mohammad H. Jafari, Hany Girgis, Zhibin Liao, Delaram Behnami, Amir H. Abdi, Hooman Vaseli, Christina Luong, Robert Rohling, Ken Gin, Teresa Tsang, Purang Abolmaesumi:
A Unified Framework Integrating Recurrent Fully-Convolutional Networks and Optical Flow for Segmentation of the Left Ventricle in Echocardiography Data. DLMIA/ML-CDS@MICCAI 2018: 29-37 - [c124]Delaram Behnami, Christina Luong, Hooman Vaseli, Amir H. Abdi, Hany Girgis, Dale Hawley, Robert Rohling, Ken Gin, Purang Abolmaesumi, Teresa Tsang:
Automatic Detection of Patients with a High Risk of Systolic Cardiac Failure in Echocardiography. DLMIA/ML-CDS@MICCAI 2018: 65-73 - [c123]Nathan Van Woudenberg, Zhibin Liao, Amir H. Abdi, Hani Girgis, Christina Luong, Hooman Vaseli, Delaram Behnami, Haotian Zhang, Kenneth Gin, Robert Rohling, Teresa Tsang, Purang Abolmaesumi:
Quantitative Echocardiography: Real-Time Quality Estimation and View Classification Implemented on a Mobile Android Device. POCUS/BIVPCS/CuRIOUS/CPM@MICCAI 2018: 74-81 - [c122]Davood Karimi, Qi Zeng, Prateek Mathur, Apeksha Avinash, Sara Mahdavi, Ingrid Spadinger, Purang Abolmaesumi, Septimiu Salcudean:
Accurate and Robust Segmentation of the Clinical Target Volume for Prostate Brachytherapy. MICCAI (4) 2018: 531-539 - [c121]Shekoofeh Azizi
, Sharareh Bayat, Ajay Rajaram, Emran Mohammad Abu Anas, Tamer Mohamed, Konrad Walus, Purang Abolmaesumi, Parvin Mousavi
:
3D tissue mimicking biophantoms for ultrasound imaging: bioprinting and image analysis. Medical Imaging: Image-Guided Procedures 2018: 105761T - [i2]Mehran Pesteie, Purang Abolmaesumi, Robert Rohling:
Deep Neural Maps. CoRR abs/1810.07291 (2018) - 2017
- [j61]Delaram Behnami, Alireza Sedghi, Emran Mohammad Abu Anas, Abtin Rasoulian, Alexander Seitel
, Victoria A. Lessoway, Tamas Ungi, David Yen, Jill Osborn, Parvin Mousavi
, Robert Rohling, Purang Abolmaesumi:
Model-based registration of preprocedure MR and intraprocedure US of the lumbar spine. Int. J. Comput. Assist. Radiol. Surg. 12(6): 973-982 (2017) - [j60]Shekoofeh Azizi
, Parvin Mousavi, Pingkun Yan
, Amir M. Tahmasebi, Jin Tae Kwak
, Sheng Xu, Baris Turkbey, Peter L. Choyke, Peter A. Pinto, Bradford J. Wood
, Purang Abolmaesumi:
Transfer learning from RF to B-mode temporal enhanced ultrasound features for prostate cancer detection. Int. J. Comput. Assist. Radiol. Surg. 12(7): 1111-1121 (2017) - [j59]Jorden Hetherington, Victoria A. Lessoway, Vit Gunka, Purang Abolmaesumi, Robert Rohling:
SLIDE: automatic spine level identification system using a deep convolutional neural network. Int. J. Comput. Assist. Radiol. Surg. 12(7): 1189-1198 (2017) - [j58]Shekoofeh Azizi
, Sharareh Bayat, Pingkun Yan
, Amir M. Tahmasebi, Guy Nir, Jin Tae Kwak
, Sheng Xu, Storey Wilson, Kenneth A. Iczkowski, M. Scott Lucia, Larry Goldenberg, Septimiu E. Salcudean
, Peter A. Pinto, Bradford J. Wood
, Purang Abolmaesumi, Parvin Mousavi
:
Detection and grading of prostate cancer using temporal enhanced ultrasound: combining deep neural networks and tissue mimicking simulations. Int. J. Comput. Assist. Radiol. Surg. 12(8): 1293-1305 (2017) - [j57]