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ORCIDFidel Alfaro-Almagro
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2020 – today
- 2023
[j13]Vaanathi Sundaresan, Christoph Arthofer, Giovanna Zamboni
, Andrew G. Murchison, Robert A. Dineen, Peter M. Rothwell, Dorothee P. Auer, Chaoyue Wang, Karla L. Miller, Benjamin C. Tendler, Fidel Alfaro-Almagro, Stamatios N. Sotiropoulos, Nikola Sprigg, Ludovica Griffanti, Mark Jenkinson:
Automated detection of cerebral microbleeds on MR images using knowledge distillation framework. Frontiers Neuroinformatics 17 (2023)- [j12]Soojin Lee, Janine D. Bijsterbosch, Fidel Alfaro-Almagro, Lloyd T. Elliott, Paul McCarthy, Bernd Taschler, Roser Sala-Llonch, Christian F. Beckmann, Eugene P. Duff, Stephen M. Smith, Gwenaëlle Douaud:
Amplitudes of resting-state functional networks - investigation into their correlates and biophysical properties. NeuroImage 265: 119779 (2023) - [j11]Cher Bass, Mariana da Silva, Carole H. Sudre, Logan Z. J. Williams, Helena S. Sousa, Petru-Daniel Tudosiu, Fidel Alfaro-Almagro, Sean P. Fitzgibbon, Matthew F. Glasser, Stephen M. Smith, Emma C. Robinson:
ICAM-Reg: Interpretable Classification and Regression With Feature Attribution for Mapping Neurological Phenotypes in Individual Scans. IEEE Trans. Medical Imaging 42(4): 959-970 (2023) - [d1]Aaron Oliver-Taylor, Adam Li, Adam G. Thomas, Adeen Flinker, Adina S. Wagner, Agah Karakuzu, Aki Nikolaidis, Alberto Lazari, Alejandro de la Vega, Alessio Giacomel, Alexander Rockhill, Alexander Jones, Alexander Li Cohen, Alexander von Lautz, Alexandre Gramfort, Alexandre Hutton, Alexandre Routier, Alexandru Foias, Ali Khan, Alizee Wickenheiser, Ana Fouto, Anders Eklund, Andrea Pigorini, Andrew Hoopes, Andrew Jahn, Andrew Janke, Anibal Sólon, Anthony Galassi, Ariel Rokem, Arjen Stolk, Arnaud Delorme, Arnaud Marcoux, Arshitha Basavaraj, Ashley G. Gillman, Athanasia M. Mowinckel, Aysegul Gunduz, Azeez Adebimpe, B. Nolan Nichols, Balint Kincses, Benjamin Beasley, Benjamin K. Dichter, Benjamin Gagl, Bertrand Thirion, Bradley Voytek, Brett L. Foster, Brian A. Wandell, Brian N. Lundstrom, Camille Maumet, Carlo Miniussi, Cecile Madjar, Chloé Pasturel, Chris Benjamin, Chris Gahnström, Chris Holdgraf, Chris Gorgolewski, Chris Rorden, Christian Büchel, Christian Horea, Christine Rogers, Christophe Phillips, Christopher J. Honey, Christopher J. Markiewicz, Christopher Lee-Messer, Clara Moreau, Clint Hansen, Cyril R. Pernet, Cyrus Eierud, D. Sturgeon, Dan Levitas, Dan Lurie, Daniel A. Handwerker, David C. Alsop, David A. Boas, David M. Groppe, David B. Keator, David McAlpine, David Thomas, Dejan Draschkow, Dianne K. Patterson, Dimitri Papadopoulos Orfanos, Dmitry Petrov, Dora Hermes, Dorien Huijser, Douglas N. Greve, Duncan Macleod, Dung Truong, Dylan Nielson, Eduard Ort, Eleonora Marcantoni, Elizabeth Bock, Elizabeth DuPre, Elke Warmerdam, Erdal Karaca, Eric A. Earl, Eric Achten, Eric Bridgeford, Erin W. Dickie, Ethan Blackwood, Eugene P. Duff, Ezequiel Mikulan, Felipe Orihuela-Espina, Fidel Alfaro-Almagro, Filip Szczepankiewicz, Filippo Maria Castelli, Franco Pestilli, Franklin W. Feingold, François Tadel, Gaia Rizzo, Gang Chen, Gaël Varoquaux, Ghislain Vaillant, Giacomo Bertazzoli, Giacomo Guidali, Giacomo Mazzamuto, Gilles de Hollander, Gio Piantoni, Gitte M. Knudsen, Giulio Castegnaro, Giuseppe Gallitto, Graham Searle, Granville J. Matheson, Gregory Kiar, Gregory Noack, Greydon Gilmore, Guillaume Flandin, Gunnar Schaefer, Gustav Nilsonne, Hamish Innes-Brown, Hanne D. Hansen, Hanzhang Lu, Hao-Ting Wang, Helena Cockx, Henk Mutsaerts, Hernando Ombao, Hugo Boniface, Ayse Ilkay Isik, Ilona Lipp, International Neuroinformatics Coordinating Facility, Iris I. A. Groen, Isla Staden, Jaap von der Aar, Jakub Kaczmarzyk, James Gholam, James D. Kent, Jan-Mathijs Schoffelen, Jan Petr, Jean-Baptiste Poline, Jean-Christophe Houde, Jean-Dominique Gallezot, Jean-Philippe Lachaux, Jeanette Mumford, Jefferson Casimir, Jeffrey G. Ojemann, Jeffrey S. Grethe, JegouA, Jelle R. Dalenberg, Jeremy T. Moreau, Jessica A. Turner, Jochem W. Rieger, John A. Detre, John Pellman, John T. Wodder, Joke Durnez, Jon Haitz Legarreta Gorrono, Jonathan C. Lau, Jonathan Winawer, Joost P. A. Kuijer, Jose Manuel Saborit, Joseph Wexler, Joseph G. Woods, J. Guiomar Niso, Julia Sprenger, Julien Cohen-Adad, Julius Welzel, Kai J. Miller, Kangjoo Lee, Katja Heuer, Kay Robbins, Kevin Larcher, Kimberly L. Ray, Kirstie J. Whitaker, Klara Gregorova, Klaus Gramann, Kris Thielemans, Kristofer E. Bouchard, Kurt Schilling, Laetitia Fesselier, Laura & John Arnold Foundation, Leandro Beltrachini, Lee Kamentsky, Lennart Walger, Lennart Wittkuhn, Liberty S. Hamilton, Luca Pollonini, Luis Hernandez-Garcia, Luke J. Edwards, Lyuba Zehl, Mainak Jas, Manjari Narayan, Manuel R. Mercier, Maqsood Yaqub, Marc Lalancette, Marco Castellaro, Maria de la Iglesia, Marie-Hélène Bourget, Mark Mikkelsen, Markus Morawski, Marta Bortoletto, Martin Craig, Martin Nørgaard, Martin Szinte, Martin Wilson, Martina Bulgari, Mateusz Pawlik, Mathias Goncalves, Mathieu Boudreau, Matt Sanderson, Matteo Tonietto, Matthias Günther, Matthias Van Osch, Maureen J. Shader, Maurice Pasternak, Max A. van den Boom, Melanie Ganz-Benjaminsen, Michael Chappell, Michael Hanke, Michael P. Harms, Michael P. Milham, Michael P. Notter, Michael Schirner, Mikaël Naveau, Nader Pouratian, Natalia Petridou, National Institute of Mental Health, Nell Hardcastle, Nicholas Traut, Nick F. Ramsey, Nicole C. Swann, Nima Bigdely Shamlo, Olivier David, Orrin Devinsky, Oscar Esteban, Pamela LaMontagne, Parul Sethi, Patricia Clement, Patrick Park, Paule-Joanne Toussaint, Peer Herholz, Petra Ritter, Pierre Rioux, Pieter Vandemaele, Pradeep Reddy Raamana, R. Cameron Craddock, Rémi Gau, Richard Höchenberger, Richard N. Henson, Robert B. Innis, Robert E. Smith, Robert Knight, Robert Luke, Robert Oostenveld, Roberto Toro, Rohan Goyal, Ross W. Blair, Russell A. Poldrack, Rémi Adon, Samir Das, Samuel Garcia, Samuel A. Nastase, Sara Elgayar, Sasha D'Ambrosio, Satrajit S. Ghosh, Scott Makeig, Sein Jeung, Shashank Bansal, Sjoerd B. Vos, Soichi Hayashi, Stefan Appelhoff, Stephan Bickel, Steven L. Meisler, Suyash Bhogawar, Sylvain Baillet, Sylvain Takerkart, Sébastien Tourbier, Sören Grothkopp, Tal Pal Attia, Tal Yarkoni, Tamás Spisák, Tamás Józsa, Taylor Salo, Teon L. Brooks, Thomas E. Nichols, Thomas Funck, Thomas Kirk, Thomas W. Okell, Tibor Auer, Timo Dickscheid, Timotheus Berg, Tobey Betthauser, Tobias Bengfort, Tom Hampshire, Tor Wager, Travis Riddle, Tristan Glatard, Tyler Collins, Ulrike Bingel, Vanessa V. Sochat, Vasudev Raguram, Vince D. Calhoun, Vittorio Iacovella, Vladimir Litvak, Wietske van der Zwaag, William Clarke, William Triplett, Wouter V. Potters, Xiangrui Li, Yaroslav O. Halchenko, Yoni Ashar, Yuan Wang, Zachary Michael, ezemikulan, josator2, monkeyman192, Étienne Bergeron:
bids-specification. Zenodo, 2023
- 2021
- [j10]Vaanathi Sundaresan, Christoph Arthofer, Giovanna Zamboni, Robert A. Dineen, Peter M. Rothwell, Stamatios N. Sotiropoulos, Dorothee P. Auer, Daniel J. Tozer, Hugh S. Markus, Karla L. Miller, Iulius Dragonu, Nikola Sprigg, Fidel Alfaro-Almagro, Mark Jenkinson, Ludovica Griffanti:
Automated Detection of Candidate Subjects With Cerebral Microbleeds Using Machine Learning. Frontiers Neuroinformatics 15: 777828 (2021) - [j9]Fidel Alfaro-Almagro, Paul McCarthy, Soroosh Afyouni, Jesper L. R. Andersson, Matteo Bastiani, Karla L. Miller, Thomas E. Nichols, Stephen M. Smith:
Confound modelling in UK Biobank brain imaging. NeuroImage 224: 117002 (2021) - [i1]Cher Bass, Mariana da Silva, Carole H. Sudre, Logan Z. J. Williams, Petru-Daniel Tudosiu, Fidel Alfaro-Almagro, Sean P. Fitzgibbon, Matthew F. Glasser, Stephen M. Smith, Emma C. Robinson:
ICAM-reg: Interpretable Classification and Regression with Feature Attribution for Mapping Neurological Phenotypes in Individual Scans. CoRR abs/2103.02561 (2021)
2010 – 2019
- 2019
- [j8]Matteo Bastiani, Michiel Cottaar, Sean P. Fitzgibbon, Sana Suri, Fidel Alfaro-Almagro, Stamatios N. Sotiropoulos, Saâd Jbabdi, Jesper L. R. Andersson:
Automated quality control for within and between studies diffusion MRI data using a non-parametric framework for movement and distortion correction. NeuroImage 184: 801-812 (2019) - [j7]Vaanathi Sundaresan, Ludovica Griffanti, Petya Kindalova, Fidel Alfaro-Almagro, Giovanna Zamboni, Peter M. Rothwell, Thomas E. Nichols, Mark Jenkinson:
Modelling the distribution of white matter hyperintensities due to ageing on MRI images using Bayesian inference. NeuroImage 185: 434-445 (2019) - [j6]Stephen M. Smith, Diego Vidaurre, Fidel Alfaro-Almagro, Thomas E. Nichols, Karla L. Miller:
Estimation of brain age delta from brain imaging. NeuroImage 200: 528-539 (2019) - 2018
- [j5]Fidel Alfaro-Almagro, Mark Jenkinson, Neal K. Bangerter, Jesper L. R. Andersson, Ludovica Griffanti, Gwenaëlle Douaud, Stamatios N. Sotiropoulos, Saâd Jbabdi, Moisés Hernández-Fernández, Emmanuel Vallée, Diego Vidaurre, Matthew A. Webster, Paul McCarthy, Christopher Rorden, Alessandro Daducci, Daniel C. Alexander, Hui Zhang, Iulius Dragonu, Paul M. Matthews, Karla L. Miller, Stephen M. Smith:
Image processing and Quality Control for the first 10, 000 brain imaging datasets from UK Biobank. NeuroImage 166: 400-424 (2018) - [j4]Diego Vidaurre, Romesh G. Abeysuriya, Robert Becker, Andrew J. Quinn, Fidel Alfaro-Almagro, Stephen M. Smith, Mark W. Woolrich:
Discovering dynamic brain networks from big data in rest and task. NeuroImage 180(Part): 646-656 (2018) - 2017
- [j3]Ludovica Griffanti, Gwenaëlle Douaud, Janine D. Bijsterbosch, Stefania Evangelisti, Fidel Alfaro-Almagro, Matthew F. Glasser, Eugene P. Duff, Sean P. Fitzgibbon, Robert Westphal, Davide Carone, Christian F. Beckmann, Stephen M. Smith:
Hand classification of fMRI ICA noise components. NeuroImage 154: 188-205 (2017) - [j2]Janine Bijsterbosch, Samuel J. Harrison, Eugene P. Duff, Fidel Alfaro-Almagro, Mark W. Woolrich, Stephen M. Smith:
Investigations into within- and between-subject resting-state amplitude variations. NeuroImage 159: 57-69 (2017) - [j1]Krzysztof J. Gorgolewski, Fidel Alfaro-Almagro, Tibor Auer, Pierre Bellec, Mihai Capota, M. Mallar Chakravarty, Nathan William Churchill, Alexander Li Cohen, R. Cameron Craddock, Gabriel A. Devenyi, Anders Eklund, Oscar Esteban, Guillaume Flandin, Satrajit S. Ghosh, J. Swaroop Guntupalli, Mark Jenkinson, Anisha Keshavan, Gregory Kiar, Franziskus Liem, Pradeep Reddy Raamana, David Raffelt, Christopher John Steele, Pierre-Olivier Quirion, Robert E. Smith, Stephen C. Strother, Gaël Varoquaux, Yida Wang, Tal Yarkoni, Russell A. Poldrack:
BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods. PLoS Comput. Biol. 13(3) (2017)
Coauthor Index
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