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Cole A. Lyman

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2020 – today

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2021
[c11]
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  - conf/bibm/LymanMRCSCB21
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Cole A. Lyman, Matthew C. Morris, Spencer Richman, Hong Bao Cao, Antony Scerri, Chris Cheadle, Gordon Broderick:
High Fidelity Modeling of Pulse Dynamics using Logic Networks. BIBM 2021: 197-204
[c10]
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Spencer C. Richmanz, Cole A. Lyman, Matthew C. Morris, Hongbao Cao, Anastasia Nesterovay, Anton Yuryevy, Chris Cheadle, Gordon Broderick:
Leveraging Drug-Target Interaction Data for the Translation of Computational Models into Clinically Actionable Interventions. BIBM 2021: 2014-2021
2020
[c9]
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Matthew C. Morris, Cole A. Lyman, Spencer Richman, Hong Bao Cao, Chris Cheadle, Gordon Broderick:
Predicting the Immune Response to Repurposed Drugs in Coronavirus-induced Cytokine Storm. BIBE 2020: 458-465
[c8]
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Matthew C. Morris, Spencer Richman, Cole A. Lyman, Jun Qu, Manoj J. Mammen, Sanjay Sethi, Gordon Broderick:
Hacking the Immune Response to Infection in Chronic Obstructive Pulmonary Disease. BIBE 2020: 548-555
[c7]
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  - conf/ipps/FujimotoLC20
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M. Stanley Fujimoto, Cole A. Lyman, Mark J. Clement:
Kcollections: A Fast and Efficient Library for K-mers. IPDPS Workshops 2020: 193-198

2010 – 2019

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2019
[c6]
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Cole A. Lyman, Mark J. Clement, Travis J. A. Craddock, Mary Fletcher, Nancy G. Klimas, Gordon Broderick:
Feedback Regulation of Immune Response to Maximum Exercise in Gulf War Illness. BCB 2019: 124-129
[c5]
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Cole A. Lyman, Connor Anderson, Matthew C. Morris, Umesh K. Nandal, Marianna J. Martindale, Mark J. Clement, Gordon Broderick:
When the How Outweighs the What: the Pivotal Importance of Context. BIBM 2019: 2149-2156
2018
[c4]
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Tanner D. Jensen, Kristi A. Bresciano, Emma Dallon, M. Stanley Fujimoto, Cole A. Lyman, Enoch Stewart, Joel Griffitts, Mark J. Clement:
The PepSeq Pipeline: Software for Antimicrobial Motif Discovery in Randomly-Generated Peptide Libraries. BCB 2018: 139-144
2017
[c3]
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Masaki Stanley Fujimoto, Paul M. Bodily, Cole A. Lyman, Andrew J. Jacobsen, Quinn Snell, Mark J. Clement:
Modeling Global and local Codon Bias with Deep Language Models. BIBE 2017: 151-156
[c2]
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M. Stanley Fujimoto, Cole A. Lyman, Anton Suvorov, Paul M. Bodily, Quinn Snell, Keith A. Crandall, Seth M. Bybee, Mark J. Clement:
Genome Polymorphism Detection Through Relaxed de Bruijn Graph Construction. BIBE 2017: 212-216
[c1]
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Cole A. Lyman, M. Stanley Fujimoto, Anton Suvorov, Paul M. Bodily, Quinn Snell, Keith A. Crandall, Seth M. Bybee, Mark J. Clement:
Whole Genome Phylogenetic Tree Reconstruction Using Colored de Bruijn Graphs. BIBE 2017: 260-265
[i1]
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  - journals/corr/abs-1709-00164
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Cole A. Lyman, M. Stanley Fujimoto, Anton Suvorov, Paul M. Bodily, Quinn Snell, Keith A. Crandall, Seth M. Bybee, Mark J. Clement:
Whole Genome Phylogenetic Tree Reconstruction Using Colored de Bruijn Graphs. CoRR abs/1709.00164 (2017)

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