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Journal Articles
- 2024
[j7]Rayyan T. Khan, Petra Pokorna, Jan Stourac, Simeon Borko, Ihor Arefiev
, Joan Planas-Iglesias, Adam Dobias, Gaspar R. P. Pinto, Veronika Szotkowska, Jaroslav Sterba, Ondrej Slaby, Jirí Damborský, Stanislav Mazurenko, David Bednar:
A computational workflow for analysis of missense mutations in precision oncology. J. Cheminformatics 16(1): 86 (2024)- [j6]Ondrej Vavra, Jonathan D. Tyzack, Farzan Haddadi, Jan Stourac, Jirí Damborský, Stanislav Mazurenko, Janet M. Thornton, David Bednar:
Large-scale annotation of biochemically relevant pockets and tunnels in cognate enzyme-ligand complexes. J. Cheminformatics 16(1): 114 (2024) - 2023
- [j5]Jan Stourac, Simeon Borko, Rayyan T. Khan, Petra Pokorna, Adam Dobias, Joan Planas-Iglesias, Stanislav Mazurenko, Gaspar R. P. Pinto, Veronika Szotkowska, Jaroslav Sterba, Ondrej Slaby, Jirí Damborský, David Bednar:
PredictONCO: a web tool supporting decision-making in precision oncology by extending the bioinformatics predictions with advanced computing and machine learning. Briefings Bioinform. 25(1) (2023) - 2022
- [j4]Antonin Kunka, David Lacko, Jan Stourac, Jirí Damborský, Zbynek Prokop, Stanislav Mazurenko:
CalFitter 2.0: Leveraging the power of singular value decomposition to analyse protein thermostability. Nucleic Acids Res. 50(W1): 145-151 (2022) - 2021
- [j3]Jan Stourac, Juraj Dubrava, Milos Musil, Jana Horackova, Jirí Damborský, Stanislav Mazurenko, David Bednar:
FireProtDB: database of manually curated protein stability data. Nucleic Acids Res. 49(Database-Issue): D319-D324 (2021) - 2019
- [j2]Christian Clason, Stanislav Mazurenko, Tuomo Valkonen:
Acceleration and Global Convergence of a First-Order Primal-Dual Method for Nonconvex Problems. SIAM J. Optim. 29(1): 933-963 (2019) - 2018
- [j1]Stanislav Mazurenko, Jan Stourac, Antonin Kunka, Sava Nedeljkovic, David Bednar, Zbynek Prokop, Jirí Damborský:
CalFitter: a web server for analysis of protein thermal denaturation data. Nucleic Acids Res. 46(Webserver-Issue): W344-W349 (2018)
Conference and Workshop Papers
- 2024
- [c2]Anton Bushuiev, Roman Bushuiev, Petr Kouba, Anatolii Filkin, Marketa Gabrielova, Michal Gabriel, Jirí Sedlár, Tomás Pluskal, Jirí Damborský, Stanislav Mazurenko, Josef Sivic:
Learning to design protein-protein interactions with enhanced generalization. ICLR 2024 - 2017
- [c1]Stanislav Mazurenko, Jirí Damborský, Zbynek Prokop:
Multi-Enzyme Pathway Optimisation Through Star-Shaped Reachable Sets. PACBB 2017: 9-17
Informal and Other Publications
- 2024
- [i3]Anton Bushuiev, Roman Bushuiev, Jirí Sedlár, Tomás Pluskal, Jirí Damborský, Stanislav Mazurenko, Josef Sivic:
Revealing data leakage in protein interaction benchmarks. CoRR abs/2404.10457 (2024) - 2023
- [i2]Anton Bushuiev, Roman Bushuiev, Anatolii Filkin, Petr Kouba, Marketa Gabrielova, Michal Gabriel, Jirí Sedlár, Tomás Pluskal, Jirí Damborský, Stanislav Mazurenko, Josef Sivic:
Learning to design protein-protein interactions with enhanced generalization. CoRR abs/2310.18515 (2023) - 2019
- [i1]Stanislav Mazurenko, Jyrki Jauhiainen, Tuomo Valkonen:
Primal-dual block-proximal splitting for a class of non-convex problems. CoRR abs/1911.06284 (2019)
Coauthor Index
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last updated on 2024-10-22 21:18 CEST by the dblp team
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